RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr5	125961532	A	G	0.00039	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	148556784	G	A	0.00543		.	FALSE
chr1	93827995	C	T	0.00714	DR1	+	FALSE
chr2	20450819	T	C	0.00807	PUM2	-	TRUE
chr1	33147947	A	G	0.00345	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr1	6282400	T	C	7.25534E-07	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	59122910	G	A	0.00251	MYSM1	-	FALSE
chr3	49395692	G	A	0.00049	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr1	16893686	G	C	0.00823	NBPF1	-	FALSE
chr2	203744629	T	C	0.00363		.	FALSE	AluSx1	SINE,Alu
chr1	10517300	T	C	0.00011		.	FALSE	AluJr	SINE,Alu
chr12	100452832	C	T	0.00386	UHRF1BP1L	-	FALSE
chr3	196670090	G	A	6.78352E-09	NCBP2-AS2	+	FALSE
chr1	53359745	A	G	0.00129	ZYG11A	+	TRUE	AluSx4	SINE,Alu
chr2	36706788	C	G	0.00481	CRIM1	+	FALSE
chr20	57603729	A	T	0.00444		.	FALSE
chr7	20178490	T	C	0.00028	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr2	217366933	C	T	2.15691E-05		.	FALSE	AluSz6	SINE,Alu
chr1	10521172	T	C	0.00244	DFFA	-	TRUE	AluY	SINE,Alu
chr15	41591418	A	G	6.38388E-06	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr1	47767914	G	A	0.00636	STIL	-	FALSE
chr4	57326159	A	G	0.00019	PAICS	+	TRUE	AluJr	SINE,Alu
chr2	242384368	G	A	0.00031	FARP2	+	FALSE	AluJr	SINE,Alu
chr3	46007823	G	T	6.71801E-06	FYCO1	-	FALSE
chr1	225707043	T	C	2.18813E-07	ENAH	-	FALSE
chr2	38971059	A	C	0.00539	SRSF7	-	FALSE
chr1	114443475	A	G	0.00538	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr1	6282400	T	C	0.00809	ICMT	-	TRUE	AluSz	SINE,Alu
chr7	137561083	T	C	0.00194	CREB3L2	-	FALSE	(GT)n	SINE,Alu
chr3	45721922	A	G	0.00181	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	6161108	C	A	0.00071	KCNAB2	+	FALSE
chr1	31838550	T	A	0.00595	FABP3	-	FALSE
chr12	125512494	A	G	0.00427		.	FALSE	AluY	SINE,Alu
chr3	126156660	C	G	0.00182	ZXDC	-	FALSE
chr5	125961463	A	G	0.00323	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	229795330	T	C	0.00334	URB2	+	FALSE
chr4	56291751	A	C	0.00291	TMEM165	+	FALSE
chr5	175802154	C	T	0.00883		.	FALSE	(CATC)n	SINE,Alu
chr1	46076462	A	G	0.00730	NASP	+	TRUE	AluSx	SINE,Alu
chr9	115446725	T	C	0.00917	INIP	-	TRUE	AluJr	SINE,Alu
chr1	109818160	T	G	3.82986E-06	CELSR2	+	FALSE
chr1	31905884	G	A	2.48126E-05	SERINC2	+	FALSE
chr1	145511962	A	G	0.00091	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	175126524	T	C	0.00901	KIAA0040	-	FALSE
chr7	55433880	G	C	0.00778	LANCL2	+	FALSE
chr1	16889217	G	C	0.00795	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr1	144828765	A	T	0.00976	NBPF20,NBPF9	+	FALSE
chr4	5710647	A	G	5.78692E-06	EVC2	-	FALSE
chr1	92976590	G	A	0.00768	EVI5	-	FALSE
chr1	120612037	T	G	0.00044	NOTCH2	-	FALSE	(CGC)n	SINE,Alu
chr3	10193683	T	G	0.00681	VHL	+	FALSE	AluJr	SINE,Alu
chr11	8707908	A	G	0.00262	RPL27A	+	TRUE	AluSx1	SINE,Alu
chr1	33148736	A	G	2.35913E-09	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr5	176887511	A	C	0.00662	DBN1	-	FALSE
chr5	149829068	C	T	0.00038	RPS14	-	FALSE
chr1	145284138	G	A	0.00382	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr6	41567394	T	A	0.00717	FOXP4	+	FALSE
chr3	52084040	C	T	4.81509E-06	DUSP7	-	FALSE
chr2	191555984	T	A	0.00171	NAB1	+	FALSE
chr17	57281058	A	G	0.00061	PRR11	+	TRUE	AluSz	SINE,Alu
chr8	30536078	T	C	0.00509	GSR	-	FALSE	AluJr	SINE,Alu
chr1	35644502	A	T	0.00702	SFPQ	-	FALSE	(A)n	SINE,Alu
chr1	19586519	A	G	0.00239	MRTO4	+	TRUE	AluSz	SINE,Alu
chr4	56291623	G	T	0.00490	TMEM165	+	FALSE
chr7	6501829	T	A	0.00124	KDELR2	-	FALSE
chr2	152132130	A	G	6.12116E-05	NMI	-	FALSE
chr1	23884597	G	A	0.00269	ID3	-	FALSE
chr1	175914284	A	G	0.00036	RFWD2	-	FALSE
chr4	1380585	A	G	0.00644	UVSSA	+	TRUE	AluJr	SINE,Alu
chr15	64455123	G	T	1.10189E-06	PPIB	-	FALSE
chr1	16890500	G	A	0.00030	NBPF1	-	FALSE
chr1	179829200	T	C	0.00497	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr14	31916944	T	C	1.05468E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr6	109784327	T	C	2.38076E-05	MICAL1,ZBTB24	-	TRUE	AluSg	SINE,Alu
chr12	125512444	A	G	4.63106E-05		.	FALSE	AluY	SINE,Alu
chr1	36068295	T	C	0.00910	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	37331745	T	C	0.00097		.	FALSE	AluJb	SINE,Alu
chr4	17803604	T	C	0.00206	DCAF16	-	TRUE	AluY	SINE,Alu
chr6	158505088	A	G	0.00083	SYNJ2	+	FALSE
chr1	19447843	C	G	0.00345	UBR4	-	FALSE
chr2	86252049	T	C	0.00271	POLR1A	-	FALSE	AluSq2	SINE,Alu
chr5	149763305	A	G	0.00640	TCOF1	+	FALSE
chr1	22418284	G	T	0.00024	CDC42	+	FALSE	(T)n	SINE,Alu
chr1	24746451	A	G	0.00683	NIPAL3	+	TRUE	AluSc	SINE,Alu
chr1	53291435	A	G	0.00790	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	36068231	T	C	0.00121	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	144917841	T	C	4.47769E-05	NBPF20,PDE4DIP	+,-	FALSE
chr1	33148196	A	G	0.00054	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	145511929	A	G	0.00028	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr12	56510697	G	A	0.00055	RPL41	+	FALSE
chr3	75779644	C	A	0.00177	ZNF717	-	FALSE
chr7	5568366	A	G	0.00400	ACTB	-	FALSE
chr4	128756737	A	G	8.66859E-06		.	FALSE	AluSx	SINE,Alu
chr2	128950515	A	G	0.00052	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	110136846	T	A	0.00639	GNAI3	+	FALSE
chr1	19984346	A	G	0.00071	MINOS1-NBL1,NBL1	+	FALSE
chr10	102315864	T	A	0.00290		.	FALSE
chr1	144595886	G	A	0.00205	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	10490539	G	C	0.00134	APITD1,APITD1-CORT	+	FALSE
chr1	45976265	A	G	0.00657	MMACHC	+	FALSE
chr4	2940147	T	C	0.00036	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr20	35520977	T	C	0.00359	TLDC2,SAMHD1	+,-	FALSE	FLAM_A	SINE,Alu
chrX	16781275	A	G	0.00417		.	FALSE	AluJo	SINE,Alu
chr2	37327676	T	C	0.00462		.	FALSE
chr1	36770073	A	T	4.33965E-05	THRAP3	+	FALSE
chr3	10193797	A	G	0.00199	VHL	+	TRUE	AluSx	SINE,Alu
chr4	169910101	C	T	0.00026	CBR4	-	FALSE
chr6	44417136	A	G	0.00644	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr14	70838324	T	C	0.00011	SYNJ2BP-COX16,SYNJ2BP	-	TRUE	AluSg	SINE,Alu
chr1	28825337	A	G	0.00099	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	145284136	G	A	0.00072	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr15	33064148	T	C	1.59288E-05	FMN1	-	FALSE
chr2	37431485	A	G	0.00339	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr5	151041871	C	A	0.00165	SPARC	-	FALSE
chr15	41591039	A	G	0.00214	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr2	74332839	A	G	4.77205E-06	TET3	+	FALSE
chr1	6282295	T	C	0.00060	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	36068184	T	C	0.00150	PSMB2	-	TRUE	AluSc	SINE,Alu
chr21	34730108	A	G	0.00680	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	109475629	A	G	0.00744	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr14	77581481	C	A	0.00997	CIPC	+	FALSE
chr3	40503557	T	C	0.00487	RPL14	+	FALSE
chr1	53291420	A	G	6.80791E-05	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr3	45721990	A	G	0.00022	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr14	62213926	T	C	0.00226	HIF1A,HIF1A-AS2	+,-	FALSE
chr5	38478065	T	A	0.00049	LIFR	-	FALSE
chr11	118471800	T	A	0.00875	ARCN1	+	FALSE	AluSx3	SINE,Alu
chr1	16841972	G	A	1.76809E-05		.	FALSE	MER41E	SINE,Alu
chr1	224573601	C	T	0.00587	WDR26	-	FALSE
chr3	178741082	A	C	5.87013E-06	ZMAT3	-	FALSE
chr3	194999352	A	T	0.00482	ACAP2	-	FALSE
chr2	30748507	C	T	0.00103	LCLAT1	+	FALSE
chr15	83659311	C	T	0.00858	FAM103A1,C15orf40	+,-	FALSE
chr1	85785554	C	T	0.00365	DDAH1	-	FALSE
chr5	125961648	A	G	4.28370E-08	PHAX	+	FALSE	AluSz6	SINE,Alu
chr1	38158211	C	T	0.00113	CDCA8	+	FALSE
chr8	133837579	G	A	0.00019	PHF20L1	+	FALSE	A-rich	SINE,Alu
chr3	47386062	T	A	4.63678E-05	KLHL18	+	FALSE
chr10	116603648	A	G	0.00267	FAM160B1	+	FALSE
chr2	68402794	T	G	0.00630	PNO1	+	FALSE
chr2	46414708	G	A	0.00155	PRKCE	+	FALSE
chr1	16932428	C	G	0.00017	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	27202960	T	C	0.00213		.	FALSE	AluSq2	SINE,Alu
chr1	43897496	G	A	0.00481	SZT2	+	FALSE
chr1	6582176	T	C	0.00893	NOL9	-	TRUE	AluSq4	SINE,Alu
chr20	43343908	G	A	9.03009E-05	KCNK15-AS1,WISP2	+,-	FALSE	(GC)n	SINE,Alu
chr2	219100202	C	T	0.00027	ARPC2	+	FALSE	AluJr	SINE,Alu
chr1	155161702	G	C	0.00020	MUC1	-	FALSE
chr1	148010973	C	T	0.00045	NBPF8	-	FALSE
chr1	11979809	A	C	0.00836	KIAA2013	-	FALSE
chr1	53291344	A	G	0.00088	ZYG11B	+	FALSE	(A)n	SINE,Alu
chr15	65442112	T	C	0.00529	CLPX	-	TRUE	AluSg	SINE,Alu
chr21	34729931	A	G	0.00040	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	172547465	A	G	0.00725	SUCO	+	FALSE
chr3	197362030	C	T	0.00302		.	FALSE
chr2	103333654	A	T	0.00488	MFSD9	-	FALSE	AluYm1	SINE,Alu
chr1	38279666	C	T	0.00521	MTF1	-	FALSE	(T)n	SINE,Alu
chr12	56510696	A	T	0.00015	RPL41	+	FALSE
chr3	42591956	G	A	0.00030	SEC22C	-	FALSE
chr10	1086804	T	A	0.00821	IDI2-AS1,IDI1	+,-	FALSE
chr3	184429718	A	G	0.00914	MAGEF1	-	FALSE
chr2	170497651	C	T	0.00195		.	FALSE
chr1	36068231	T	C	0.00508	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	33148210	A	G	0.00114	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	16011005	G	C	0.00616	PLEKHM2	+	FALSE	(GCG)n	SINE,Alu
chr2	39010088	A	G	0.00192		.	FALSE	AluSp	SINE,Alu
chr1	148343689	A	G	0.00517	NBPF8,NBPF14,NBPF9	-	FALSE
chr2	3504687	A	G	0.00755	ADI1	-	FALSE
chr19	11945685	A	G	0.00016	ZNF440	+	TRUE	AluSp	SINE,Alu
chr1	40537922	A	G	0.00686	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	27205632	T	C	0.00471		.	FALSE	FLAM_A	SINE,Alu
chr1	10521172	T	C	0.00295	DFFA	-	TRUE	AluY	SINE,Alu
chr1	54493197	T	C	0.00148	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr1	67874697	T	C	0.00186	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	14986098	T	C	0.00996	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	100548780	A	T	0.00791	MFSD14A	+	FALSE
chr2	220416967	C	T	0.00300	OBSL1	-	FALSE
chr1	228881190	T	G	0.00043	RHOU	+	FALSE
chr1	1419700	A	G	0.00464	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	150969257	T	C	0.00400		.	FALSE	AluSq2	SINE,Alu
chr1	1252513	T	C	0.00223	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	154128835	G	T	0.00032	TPM3	-	FALSE
chr21	46935076	T	G	0.00164	SLC19A1	-	FALSE
chr7	26708303	G	T	0.00095	SKAP2	-	FALSE	AluSx3	SINE,Alu
chr5	41917694	T	C	0.00784	C5orf51	+	FALSE
chr1	43391823	C	T	0.00718	SLC2A1	-	FALSE
chr1	44685732	T	C	9.79150E-12	DMAP1	+	FALSE
chr2	86979093	G	A	0.00591	RMND5A	+	FALSE
chr3	10255002	C	G	0.00043	IRAK2	+	FALSE
chr1	44818549	C	T	0.00108	ERI3	-	FALSE
chr2	38522141	G	T	0.00147	ATL2	-	FALSE
chr1	16892938	T	C	0.00569	NBPF1	-	FALSE
chr11	62557871	G	C	0.00273	TMEM179B,TMEM223	+,-	FALSE
chr2	37330612	T	C	0.00030		.	FALSE	AluSq2	SINE,Alu
chr1	201846675	C	T	0.00145	IPO9	+	FALSE
chr4	106767318	A	G	1.71247E-06	GSTCD	+	TRUE	AluJb	SINE,Alu
chr1	19542250	T	C	0.00780	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr10	60047608	A	G	0.00356	CISD1	+	FALSE	(A)n	SINE,Alu
chr1	44171143	C	A	0.00118	KDM4A-AS1,KDM4A	+,-	FALSE
chr1	32799510	T	G	0.00048	MARCKSL1	-	FALSE
chr3	32207907	T	C	0.00922	GPD1L	+	FALSE
chr1	10520672	T	C	0.00584	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	180144485	G	A	0.00665	QSOX1	+	FALSE
chr1	52817434	T	C	0.00799	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr2	128952075	A	G	0.00919	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr3	49053219	A	G	1.70535E-05	WDR6,DALRD3	+,-	FALSE
chrX	123046306	A	G	0.00016	XIAP	+	TRUE	AluJb	SINE,Alu
chr1	16892279	C	A	0.00326	NBPF1	-	FALSE
chr15	32820880	C	G	0.00672	WHAMMP1	-	FALSE
chr5	37290323	T	C	0.00029		.	FALSE	AluSz	SINE,Alu
chr1	28661657	A	G	0.00910	MED18	+	TRUE	AluSg	SINE,Alu
chr8	48890109	A	G	8.88178E-16	MCM4	+	TRUE	AluJb	SINE,Alu
chr1	142619386	G	A	0.00637		.	FALSE
chr2	201676441	G	A	0.00140	LOC101927795,BZW1	+,-	FALSE
chr1	51738627	A	G	0.00024	RNF11	+	FALSE
chr4	56237899	A	G	0.00503	SRD5A3,SRD5A3-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	227211026	C	G	0.00373	CDC42BPA	-	FALSE
chr1	6659505	G	A	0.00017	KLHL21	-	FALSE
chr1	1597403	C	T	0.00015	CDK11B,SLC35E2B	-	FALSE
chr1	70718269	A	G	0.00234		.	FALSE
chr1	143464946	T	C	0.00109		.	FALSE
chr2	217366673	A	G	0.00517		.	FALSE	AluSz	SINE,Alu
chr1	1684347	C	T	0.00550	NADK	-	FALSE
chr3	65341374	T	A	0.00029	MAGI1	-	FALSE
chr1	43394612	T	C	0.00154	SLC2A1	-	FALSE
chr10	1086797	A	C	0.00499	IDI2-AS1,IDI1	+,-	FALSE
chr1	16890130	A	C	0.00594	NBPF1	-	FALSE
chr2	206986245	T	C	0.00979		.	FALSE	AluSz	SINE,Alu
chr7	100271437	C	A	0.00026	GNB2	+	FALSE
chr2	113334357	G	A	8.00796E-05	POLR1B	+	FALSE	AluSz	SINE,Alu
chr1	46075168	C	A	0.00155	NASP	+	FALSE	A-rich	SINE,Alu
chr1	93297595	G	T	0.00479	RPL5	+	FALSE
chr1	114438951	A	G	0.00017	AP4B1-AS1,AP4B1	+,-	FALSE
chr2	46839477	T	C	0.00033	PIGF	-	FALSE
chr3	113351702	A	G	0.00042		.	FALSE	7SLRNA	SINE,Alu
chr1	203771852	G	T	0.00883	ZC3H11A	+	FALSE	(T)n	SINE,Alu
chr1	10042987	A	G	3.47016E-05	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	148251009	T	C	0.00065	NBPF8,NBPF14,NBPF9	-	TRUE
chr1	6282383	T	C	0.00130	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	9161203	T	C	0.00235		.	FALSE	AluSx	SINE,Alu
chr1	53291382	A	G	0.00691	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	70904800	G	T	0.00020	CTH	+	FALSE
chr1	16893686	G	C	0.00138	NBPF1	-	FALSE
chr6	29911284	T	C	0.00019		.	FALSE
chr1	169768080	C	A	5.53708E-05	C1orf112	+	FALSE
chr1	228334277	C	T	0.00256	GUK1	+	FALSE
chr1	156219450	A	G	0.00753	SMG5	-	FALSE
chr5	9546451	G	A	0.00030	SNHG18	+	FALSE
chr1	168220489	A	G	0.00525		.	FALSE	AluSz6	SINE,Alu
chr1	236714710	C	T	0.00014	LGALS8,HEATR1	+,-	FALSE
chr20	25428294	A	G	1.11452E-05	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	32687475	T	C	0.00785	TMEM234,EIF3I	+,-	FALSE
chr1	211921422	T	G	0.00686	LPGAT1	-	FALSE
chr1	26774225	A	G	0.00614	DHDDS	+	TRUE	AluSz6	SINE,Alu
chr11	118915753	T	C	8.93388E-07	HYOU1	-	FALSE
chr1	36299630	A	G	0.00828	AGO4	+	FALSE
chr2	85546320	G	T	0.00749	TGOLN2	-	FALSE	AluSc	SINE,Alu
chr6	42855979	A	G	8.12389E-06	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	52520866	C	T	0.00195	TXNDC12	-	FALSE
chr1	110023610	G	A	0.00636	SYPL2	+	FALSE
chr20	54963756	T	C	0.00476	AURKA	-	TRUE	AluSq10	SINE,Alu
chr1	117530213	G	T	0.00256	PTGFRN	+	FALSE
chr1	3730332	T	C	0.00025	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	10517276	T	C	0.00252		.	FALSE	AluJr	SINE,Alu
chr1	28835847	A	G	4.14471E-06	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	66838733	A	C	0.00086	PDE4B	+	FALSE
chr4	83351845	G	T	0.00422	ENOPH1	+	FALSE
chr6	42856007	A	G	0.00212	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	179044181	A	G	0.00660	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	36067760	T	C	0.00021	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	15114492	T	C	0.00073	RBSN	-	TRUE	AluY	SINE,Alu
chr1	145688973	A	G	8.24717E-05	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	222802926	C	T	0.00035	MIA3	+	FALSE
chr1	144481235	A	G	1.18230E-05	NBPF20	+	FALSE
chr20	29631557	A	G	0.00159	FRG1BP	+	FALSE
chr12	9464349	A	C	0.00042	LOC642846	+	FALSE
chr1	1650797	A	G	0.00276	CDK11B,CDK11A	-	FALSE
chr2	61416411	T	G	0.00146	USP34	-	FALSE	AluSc8	SINE,Alu
chr3	179117128	T	C	0.00112	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	220310158	A	C	0.00159	IARS2	+	FALSE
chr3	48787108	T	C	0.00291	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	45280099	A	G	0.00286		.	FALSE	AluYk3	SINE,Alu
chr2	10586903	A	C	0.00041	ODC1,SNORA80B	-	FALSE
chr1	241792562	A	G	0.00800	OPN3,CHML	-	FALSE
chr1	160967856	T	C	0.00027	F11R	-	TRUE	AluSp	SINE,Alu
chr4	129796173	G	T	1.40481E-05	JADE1	+	FALSE
chr3	45722287	A	G	0.00197	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr20	25428308	A	G	0.00185	GINS1	+	TRUE	AluSz	SINE,Alu
chr2	37331929	T	C	0.00518		.	FALSE	L1MC4	SINE,Alu
chr2	77745788	T	C	0.00000	LRRTM4	-	FALSE
chr3	5222483	T	G	1.83612E-05	ARL8B	+	FALSE
chr1	10043053	A	G	0.00042	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	19586501	A	G	0.00019	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	188330285	G	T	0.00590	TFPI	-	FALSE
chr1	45279900	T	C	0.00073		.	FALSE	(TCTT)n	SINE,Alu
chr4	76568676	T	A	0.00051	G3BP2	-	FALSE
chr2	189877303	G	T	0.00824	COL3A1	+	FALSE
chr6	150047376	T	C	0.00612	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	27879797	C	A	0.00246	AHDC1	-	FALSE	MIRb	SINE,Alu
chr1	100489992	A	G	0.00297	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr1	45975740	C	G	0.00096	MMACHC	+	FALSE	AluSx4	SINE,Alu
chr1	53291425	A	G	0.00517	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	109535117	C	T	0.00211	WDR47	-	FALSE
chr1	12071680	A	G	5.54475E-07	MFN2	+	FALSE
chr1	214557685	C	A	0.00205	PTPN14	-	FALSE
chr17	49041866	T	C	0.00153	SPAG9	-	TRUE	AluSx	SINE,Alu
chr5	17276848	C	A	0.00634	BASP1	+	FALSE	(A)n	SINE,Alu

RBP	AATF
Knock-Method	shRNA
RBP Family	Non-canonical_RBP
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR424YSV
Platform	HiSeq
Pubmed ID	32252787

AATF - Target Gene Network