Dataset Overview
RBP
HNRNPA2B1
Knock-Method
shRNA
RBP Family
RRM_1
Biosample Name
HepG2
Tissue Type
Liver
Biosample Type
Cell line
# of Control
2
# of Treat
2
Species
Human
Data Source
ENCODE
Profile ID
ENCSR769GES
Platform
HiSeq
Pubmed ID
32252787
HNRNPA2B1 - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of HNRNPA2B1
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Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
A1CF
30.66
20.69
-0.19035
0.01645
0.04491
A2M
2149.68
2334.51
0.23943
0.00350
0.01248
AADAC
0.57
1.29
1.27115
4.88910E-05
0.00032
AAGAB
8.9
12.68
0.51480
3.25359E-06
2.92453E-05
AARS
64.38
42.14
-0.55042
3.15977E-10
6.49044E-09
AARSD1
13.3
19.02
0.45639
0.00048
0.00232
AASS
8.55
6.58
-0.38543
0.00042
0.00205
AATF
16.24
19.44
0.20675
0.02581
0.06450
AATK
1.82
1.62
-0.46355
0.03906
0.09000
ABAT
21.04
32.36
0.56451
4.94434E-12
1.40919E-10
Showing 1 to 10 of 6,069 entries
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Function Analysis of Target Genes of HNRNPA2B1
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ABCD4
74766852_74766971_74764632_74764772_74769577_74769759
0.00075
-0.355
DataSet_01_473
View details
ACSS3
81593438_81593490_81593119_81593223_81610679_81610775
0.00716
0.038
DataSet_01_473
View details
AFMID
76200908_76200981_76198783_76198832_76202026_76202131
0.00603
0.094
DataSet_01_473
View details
AHSG
186336351_186336426_186334975_186335139_186338374_186339107
0.00177
-0.61
DataSet_01_473
View details
AKAP9
91671359_91671500_91669987_91670212_91671981_91672085
0.00128
-0.26
DataSet_01_473
View details
ALB
74270663_74270890_74270003_74270123_74272345_74272478
0.00069
-0.496
DataSet_01_473
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AMBP
116832133_116832186_116824956_116825038_116835204_116835306
0.00002
0.737
DataSet_01_473
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ANKRD10
111546455_111546549_111545044_111545610_111558379_111558471
0.00886
0.148
DataSet_01_473
View details
ANXA6
150490187_150490205_150489313_150489407_150496687_150496741
0.00953
-0.085
DataSet_01_473
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APOPT1
104029551_104029716_104029389_104029461_104037959_104038157
0.00019
0.528
DataSet_01_473
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Showing 1 to 10 of 267 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ABAT
8829555_8829666_8839857_8839955_8768421_8768568
0.00000
-0.182
DataSet_01_473
View details
ABI2
204244930_204245107_204255768_204255866_204231599_204231767
0.00000
0.427
DataSet_01_473
View details
AC004381.6
20844324_20844445_20851076_20851181_20843477_20843581
0.00184
-0.507
DataSet_01_473
View details
ACADSB
124797262_124797363_124799981_124800188_124793871_124794031
0.00985
0.1
DataSet_01_473
View details
ACLY
40049285_40049427_40054001_40054092_40048531_40048700
0.00047
-0.181
DataSet_01_473
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ACP1
275139_275201_276979_277085_272191_272305
0.00193
-0.148
DataSet_01_473
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ACSL4
108926364_108926601_108939372_108939425_108925947_108926125
0.00113
-0.069
DataSet_01_473
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ACSS3
81540080_81540131_81543720_81543796_81536885_81537026
0.00328
-0.5
DataSet_01_473
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ACTN4
39218585_39218666_39218955_39219021_39217596_39217743
0.00063
-0.032
DataSet_01_473
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ACTR3
114670748_114670804_114684921_114685032_114647686_114647900
0.00104
-0.165
DataSet_01_473
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Showing 1 to 10 of 238 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AKR1A1
46032540_46032758_46032540_46032692_46033653_46033849
0.00014
0.237
DataSet_01_473
View details
ANPEP
90357856_90358094_90358003_90358094_90349200_90350037
0.00127
0.3
DataSet_01_473
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ATXN2L
28844759_28844966_28844759_28844829_28845385_28845532
0.00001
0.699
DataSet_01_473
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B4GALT2
44451188_44451420_44451188_44451293_44455969_44456151
0.00154
-0.038
DataSet_01_473
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BCL2L2-PABPN1
23776058_23776285_23776058_23776103_23776400_23776488
0.00336
0.187
DataSet_01_473
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EPS8L2
709552_709800_709552_709608_710421_710486
0.00845
-0.029
DataSet_01_473
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F12
176832560_176832806_176832735_176832806_176832323_176832434
0.00009
-0.507
DataSet_01_473
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F2
46748260_46748430_46748260_46748387_46749545_46749684
0.00655
0.015
DataSet_01_473
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GCKR
27729347_27729468_27729347_27729446_27729654_27729752
0.00583
0.379
DataSet_01_473
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GEMIN2
39583509_39583679_39583509_39583599_39584032_39584117
0.00592
-0.109
DataSet_01_473
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Showing 1 to 10 of 37 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ACTG1
79478928_79479168_79478928_79479141_79479257_79479386
0.00156
-0.022
DataSet_01_473
View details
AHCY
32880163_32880359_32880163_32880313_32881886_32881962
0.00480
0.022
DataSet_01_473
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ANXA5
122617735_122617803_122617735_122617779_122618017_122618121
0.00766
0.309
DataSet_01_473
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APOA2
161192707_161192840_161192707_161192784_161193139_161193215
0.00107
-0.011
DataSet_01_473
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APOA2
161192707_161193056_161192707_161192784_161193139_161193215
0.00254
-0.026
DataSet_01_473
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APOC4
45451957_45452117_45452019_45452117_45451722_45451790
0.00105
-0.021
DataSet_01_473
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ARFIP2
6501201_6501409_6501201_6501298_6501552_6501693
0.00000
0.812
DataSet_01_473
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ARGLU1
107209839_107210052_107209839_107209964_107211779_107212005
0.00699
0.112
DataSet_01_473
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ARHGAP5
32586345_32586493_32586348_32586493_32559707_32563592
0.00460
-0.147
DataSet_01_473
View details
ATP5G3
176046082_176046211_176046082_176046194_176046383_176046438
0.00219
0.011
DataSet_01_473
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ACADVL
7125985_7126556_7125985_7126184_7126451_7126556
0.00064
-0.103
DataSet_01_473
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ACSL5
114170220_114170463_114170220_114170253_114170341_114170463
0.00637
-0.052
DataSet_01_473
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AFMID
76198575_76198815_76198575_76198684_76198783_76198815
0.00868
0.034
DataSet_01_473
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AKR1B1
134132049_134132813_134132049_134132133_134132731_134132813
0.00180
-0.053
DataSet_01_473
View details
ATF4
39916568_39917676_39916568_39916756_39917358_39917676
0.00000
0.074
DataSet_01_473
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ATP6V0B
44441973_44442331_44441973_44442051_44442261_44442331
0.00167
0.066
DataSet_01_473
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AUP1
74755877_74756409_74755877_74756062_74756258_74756409
0.00516
-0.057
DataSet_01_473
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AUP1
74755379_74755616_74755379_74755448_74755543_74755616
0.00714
0.049
DataSet_01_473
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C17orf76-AS1
16342640_16343567_16342640_16343017_16343498_16343567
0.00150
0.045
DataSet_01_473
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C17orf76-AS1
16342640_16343567_16342640_16342728_16343498_16343567
0.00849
0.014
DataSet_01_473
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Differential Variants in RNA (DVRs)
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Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
chr1
46077218
A
G
0.00543
NASP
+
TRUE
AluSc8
SINE,Alu
chr1
112003958
T
A
0.00557
ATP5F1
+
FALSE
Helitron2Na_Mam
SINE,Alu
chr1
19542310
T
C
2.12437E-06
LOC101927895,EMC1
+,-
FALSE
AluSz
SINE,Alu
chr1
9331254
A
G
0.00793
H6PD
+
TRUE
AluSx
SINE,Alu
chr1
160967817
T
C
0.00478
F11R
-
TRUE
AluSp
SINE,Alu
chr1
59120961
G
A
9.55369E-05
MYSM1
-
FALSE
chr1
168212509
A
G
0.00765
.
FALSE
chr1
16889339
C
T
0.00129
NBPF1
-
FALSE
L1MC4
SINE,Alu
chr1
95362949
A
T
0.00012
CNN3
-
FALSE
(A)n
SINE,Alu
chr1
145512950
A
G
2.03454E-08
NBPF20,NBPF10,RBM8A,GNRHR2
+,-
FALSE
AluSz6
SINE,Alu
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Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression