RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	35223881	G	A	0.00228	GJB5	+	FALSE
chr3	196046746	T	C	0.00513	TM4SF19-TCTEX1D2,TM4SF19-AS1	+,-	FALSE	AluSc5	SINE,Alu
chr10	104661031	A	G	0.00265	BORCS7-ASMT,AS3MT	+	TRUE	AluY	SINE,Alu
chr2	38971644	T	G	0.00021	SRSF7	-	FALSE
chr1	20238572	A	T	0.00950	OTUD3	+	FALSE
chr2	37429627	A	G	0.00330	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr1	109535117	C	T	0.00211	WDR47	-	FALSE
chr2	61154325	T	C	0.00706	REL	+	FALSE	L2b	SINE,Alu
chr2	86249930	T	C	6.06022E-05	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	94342564	C	A	0.00098	DNTTIP2	-	FALSE
chr12	125513788	A	G	0.00592		.	FALSE	AluSx1	SINE,Alu
chr19	11945688	A	G	0.00083	ZNF440	+	TRUE	AluSp	SINE,Alu
chr1	143189042	C	T	0.00087	LOC102723769	-	FALSE	L1MC4	SINE,Alu
chr5	139931631	G	C	0.00138	SRA1	-	FALSE
chr13	41635234	T	C	0.00395		.	FALSE
chr1	10517273	T	C	0.00583		.	FALSE	AluJr	SINE,Alu
chr1	25168124	G	C	0.00669	CLIC4	+	FALSE
chr2	132481245	T	G	0.00382	C2orf27A	+	FALSE
chr10	75009592	T	C	1.74317E-07	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr1	76253041	T	A	0.00646	RABGGTB	+	FALSE
chr1	6282301	T	C	0.00290	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	100489992	A	G	0.00938	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr13	31033317	C	T	0.00254	HMGB1	-	FALSE
chr3	197400501	C	G	0.00011	RUBCN	-	FALSE
chr4	188925184	G	A	0.00032	ZFP42	+	FALSE
chr1	10519048	T	C	0.00089		.	FALSE	AluSx3	SINE,Alu
chr5	151041884	T	A	0.00101	SPARC	-	FALSE
chr1	110604747	G	A	0.00101	ALX3	-	FALSE
chr1	87811070	G	A	0.00396	LMO4	+	FALSE
chr1	203098275	T	G	0.00942	ADORA1	+	FALSE
chr7	107788257	C	T	0.00068	NRCAM	-	FALSE
chr1	71532815	G	A	0.00712	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr12	9848629	A	G	0.00027	CLEC2D	+	FALSE
chr2	162268108	G	A	0.00091	PSMD14	+	FALSE
chr1	94335191	C	T	0.00382	DNTTIP2	-	FALSE
chr7	152342999	T	C	0.00313		.	FALSE	FRAM	SINE,Alu
chr4	17804847	T	C	0.00306	DCAF16	-	TRUE	AluSx	SINE,Alu
chr4	25236017	T	C	0.00291	PI4K2B	+	FALSE
chr2	85546320	G	T	0.00749	TGOLN2	-	FALSE	AluSc	SINE,Alu
chr1	12401868	A	C	0.00526	VPS13D	+	FALSE
chr1	87379497	A	G	0.00067	SEP15	-	FALSE
chr17	38438362	G	A	0.00016	WIPF2	+	FALSE	A-rich	SINE,Alu
chr3	42826041	T	G	0.00019	HIGD1A	-	FALSE
chr22	36677551	T	C	7.06365E-05	MYH9	-	FALSE
chr1	10517276	T	C	0.00079		.	FALSE	AluJr	SINE,Alu
chr4	52888026	A	C	0.00677	SGCB	-	FALSE
chr1	120539742	G	A	0.00469	NOTCH2	-	FALSE
chr1	45244414	T	A	0.00750		.	FALSE
chr10	120801785	T	A	0.00665	EIF3A	-	FALSE
chr5	135382989	G	C	7.70449E-09	TGFBI	+	FALSE
chr1	28865500	T	A	0.00509	RCC1	+	FALSE
chr1	204524457	A	G	6.02506E-06	MDM4	+	TRUE	AluY	SINE,Alu
chr1	16945780	C	T	0.00034	CROCCP2	-	FALSE
chr1	145284883	A	G	0.00329	NBPF20,NOTCH2NL	+	FALSE	L2a	SINE,Alu
chr1	148556784	G	A	0.00543		.	FALSE
chr1	87170493	T	G	0.00345	SH3GLB1	+	FALSE
chr1	1595540	T	C	0.00048	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr1	10517623	T	C	8.06723E-05		.	FALSE	AluSx1	SINE,Alu
chr1	16929327	C	T	0.00315	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	10520725	T	C	0.00234	DFFA	-	TRUE	AluSc8	SINE,Alu
chr15	42503335	T	C	0.00023	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr7	29962282	G	C	0.00023	SCRN1	-	FALSE
chr1	44818525	T	C	0.00442	ERI3	-	FALSE
chr3	42266349	C	T	0.00942	TRAK1	+	FALSE
chr1	36067677	T	C	1.65353E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	125961447	A	G	0.00563	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	113247898	G	A	0.00077	RHOC	-	FALSE
chr3	99463810	G	T	0.00496	MIR548G,COL8A1	+,-	FALSE
chr1	6282295	T	C	0.00060	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	6279957	A	G	0.00814	RNF207	+	TRUE	AluSp	SINE,Alu
chr20	43706946	A	G	0.00434	STK4	+	TRUE	AluSx4	SINE,Alu
chr1	145369354	C	T	0.00872	NBPF20,NBPF10	+	FALSE
chr16	67715404	T	C	0.00102	GFOD2	-	TRUE	AluSz	SINE,Alu
chr2	217366919	A	G	0.00709		.	FALSE	AluSz6	SINE,Alu
chr20	18468339	T	C	0.00062	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr15	41590972	A	G	2.40282E-05	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	16889866	G	A	0.00051	NBPF1	-	FALSE
chr1	46076543	A	G	0.00156	NASP	+	TRUE	AluSx	SINE,Alu
chr22	38285016	A	G	0.00030		.	FALSE	AluSz	SINE,Alu
chr1	10221302	G	A	0.00119	UBE4B	+	FALSE
chr2	118854108	A	T	0.00568	INSIG2	+	FALSE
chr1	19984104	A	C	0.00402	MINOS1-NBL1,NBL1	+	FALSE
chr2	118589029	T	G	0.00058	DDX18	+	FALSE
chr2	201774641	T	C	0.00928		.	FALSE	AluJr4	SINE,Alu
chr2	73339708	G	A	0.00991	RAB11FIP5	-	FALSE
chr3	179117242	T	C	0.00011	GNB4	-	TRUE	AluSz	SINE,Alu
chr9	130209956	A	T	0.00221	RPL12	-	FALSE
chr1	108678732	T	C	0.00396	SLC25A24	-	FALSE
chr1	200375848	C	T	0.00586	ZNF281	-	FALSE	(T)n	SINE,Alu
chr1	10042988	A	G	0.00095	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr11	76733943	A	G	0.00925	ACER3	+	FALSE	A-rich	SINE,Alu
chr1	31905886	C	A	0.00702	SERINC2	+	FALSE
chr11	73387540	G	A	0.00438	RAB6A	-	FALSE
chr1	28939803	C	T	1.27013E-09	TAF12	-	FALSE
chr1	27992800	C	A	0.00011	IFI6	-	FALSE	FAM	SINE,Alu
chr19	39433143	C	T	0.00235	FBXO17	-	FALSE	AluJb	SINE,Alu
chr3	98299365	T	G	3.92075E-11	CPOX	-	FALSE
chr1	53289860	A	G	0.00041	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr19	11256626	T	C	1.61091E-07	SPC24	-	TRUE	AluJr4	SINE,Alu
chr1	244572645	T	G	0.00103	ADSS	-	FALSE
chr1	6582425	T	C	0.00039	NOL9	-	TRUE	AluSx1	SINE,Alu
chr4	128995640	G	A	0.00567	LARP1B	+	FALSE
chr2	201749994	T	C	0.00496	PPIL3	-	TRUE	AluSx	SINE,Alu
chr1	36067677	T	C	0.00017	PSMB2	-	TRUE	AluSz	SINE,Alu
chr15	49283066	T	G	0.00065	SECISBP2L	-	FALSE
chr1	173862270	G	C	0.00197		.	FALSE	AluSz6	SINE,Alu
chr1	36067838	T	C	0.00348	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	11084103	T	A	0.00162	TARDBP	+	FALSE
chr9	80333361	C	T	0.00382	GNAQ	-	FALSE
chr1	23636277	A	T	0.00632	HNRNPR	-	FALSE
chrX	24095285	A	G	0.00135	EIF2S3	+	TRUE	AluSx	SINE,Alu
chr1	23409538	G	A	0.00292	KDM1A	+	FALSE
chr1	43629982	C	T	0.00118	EBNA1BP2	-	FALSE
chr3	40578997	A	G	0.00094	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	118503786	A	G	0.00135	SPAG17	-	FALSE	AluSx3	SINE,Alu
chr1	36770065	C	T	0.00131	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	205687213	T	A	0.00950	NUCKS1	-	FALSE
chr1	6948076	C	T	0.00221	CAMTA1	+	FALSE	L2a	SINE,Alu
chr1	569803	G	A	0.00166		.	FALSE
chr4	164245873	T	A	0.00014	NPY1R	-	FALSE
chr1	144604425	C	T	0.00269	NBPF20	+	FALSE
chr6	41567394	T	A	0.00717	FOXP4	+	FALSE
chr5	167898510	C	G	0.00013	WWC1	+	FALSE
chr1	77166017	G	A	0.00627		.	FALSE
chr10	101992793	T	C	0.00407	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr17	77807105	C	A	4.63827E-05	CBX4	-	FALSE
chr1	19447819	T	C	0.00337	UBR4	-	FALSE
chr1	1252441	T	C	0.00086	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr1	28662105	A	G	0.00846	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	35649803	A	C	0.00659	SFPQ	-	FALSE
chr17	61502458	T	A	0.00317	TANC2	+	FALSE
chr1	148752615	C	A	0.00042		.	FALSE
chr4	2940358	G	A	2.85215E-10	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr17	73940094	T	C	0.00557	ACOX1	-	TRUE	AluJb	SINE,Alu
chr1	1252749	T	C	0.00875	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr3	196230564	G	C	0.00842	RNF168	-	FALSE
chr2	91805938	A	G	0.00084		.	FALSE	MLT1H1	SINE,Alu
chr1	16254872	C	A	1.11022E-16	SPEN	+	FALSE
chr1	100550370	T	A	0.00743	SASS6	-	FALSE
chr2	37328013	T	C	0.00364		.	FALSE
chr3	140695493	C	A	0.00559	SLC25A36	+	FALSE
chr5	204215	A	G	0.00872		.	FALSE	MER68	SINE,Alu
chr19	11560483	A	G	0.00775	PRKCSH	+	TRUE	AluSx	SINE,Alu
chr2	172178680	T	C	9.91686E-05	METTL8	-	TRUE	AluSx3	SINE,Alu
chr1	3545191	C	T	0.00597	TPRG1L	+	FALSE
chr19	49619561	T	C	2.39173E-05	LIN7B	+	FALSE
chr2	112252629	A	C	0.00107	MIR4435-2HG	-	FALSE
chr3	41281407	G	T	0.00011	CTNNB1	+	FALSE
chr1	54871874	C	T	2.61533E-07	SSBP3	-	FALSE
chr20	25427865	A	G	0.00018	GINS1	+	FALSE	AluSz	SINE,Alu
chr10	129216658	T	C	0.00710	DOCK1	+	FALSE
chr2	55516941	C	T	0.00110	CCDC88A	-	FALSE
chr19	21367088	A	G	0.00018	ZNF431	+	TRUE	AluSc	SINE,Alu
chrX	2824894	T	C	0.00770	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	229730452	G	A	0.00236	TAF5L	-	FALSE
chr4	2516790	G	T	7.50309E-05	RNF4	+	FALSE
chr3	196670094	G	C	0.00017	NCBP2-AS2	+	FALSE
chr13	52327020	G	A	0.00019	WDFY2	+	FALSE
chr7	128293103	A	C	0.00313	LINC01000	+	FALSE
chr3	183534913	A	G	0.00367	MAP6D1	-	FALSE
chr6	42854739	A	C	0.00671	RPL7L1	+	FALSE	AluSc	SINE,Alu
chr8	87485483	G	C	0.00554	RMDN1	-	FALSE
chr9	132266644	A	G	0.00081	LINC00963	+	TRUE	AluSx	SINE,Alu
chr2	37331116	T	C	0.00481		.	FALSE	AluSx1	SINE,Alu
chr15	65442546	T	C	0.00564	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	54565296	A	G	0.00623	TCEANC2	+	TRUE	AluSx1	SINE,Alu
chr1	16889866	G	A	0.00995	NBPF1	-	FALSE
chr2	207942527	A	T	0.00107	KLF7	-	FALSE
chr1	65898873	G	C	0.00530	LEPR,LEPROT	+	FALSE
chr1	144595935	G	A	0.00061	NBPF20	+	FALSE	AluJb	SINE,Alu
chr19	24104018	A	G	0.00543	ZNF726	+	FALSE	AluSg4	SINE,Alu
chr1	20976163	C	T	1.02809E-07	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	1595586	T	C	0.00206	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr3	57548976	A	G	0.00132	PDE12	+	TRUE	FRAM	SINE,Alu
chr1	168218735	A	G	0.00924		.	FALSE	AluSz	SINE,Alu
chr1	86816600	A	G	0.00830	ODF2L	-	FALSE	L1PA7	SINE,Alu
chr1	9160900	T	C	0.00010		.	FALSE	AluJb	SINE,Alu
chr2	183643241	C	A	0.00108	DNAJC10	+	FALSE
chr1	45452227	G	C	0.00046	EIF2B3	-	FALSE
chr2	202029999	T	G	0.00350	CFLAR	+	FALSE	(TTA)n	SINE,Alu
chr7	20178490	T	C	0.00028	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	10519951	T	C	0.00499		.	FALSE	AluJr	SINE,Alu
chr1	19238562	G	A	3.36880E-06	IFFO2	-	FALSE
chr1	150704483	T	C	0.00028	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	29631909	A	G	0.00029	PTPRU	+	FALSE
chr1	114940211	G	T	8.00129E-05	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	179326908	A	G	6.25947E-07	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	1419775	A	G	0.00090	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr17	42876738	T	C	0.00481	GJC1	-	TRUE	AluSz6	SINE,Alu
chrX	77083915	T	C	0.00075	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	204189357	C	T	0.00835	PLEKHA6	-	FALSE
chr1	203277244	A	G	0.00115	BTG2	+	FALSE
chr1	16912015	G	A	0.00092	NBPF1	-	FALSE
chr1	45976265	A	G	0.00657	MMACHC	+	FALSE
chr21	34728146	A	G	0.00070	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr1	36770064	T	C	0.00086	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	113672569	A	G	0.00742		.	FALSE	AluJb	SINE,Alu
chr11	118471800	T	A	0.00875	ARCN1	+	FALSE	AluSx3	SINE,Alu
chr3	10192720	A	G	0.00110	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	16890428	T	A	1.76753E-05	NBPF1	-	FALSE
chr1	54691465	C	T	0.00064	SSBP3	-	FALSE
chr10	129910475	T	G	0.00061	MKI67	-	FALSE
chr1	154557184	G	A	0.00558	ADAR	-	FALSE	A-rich	SINE,Alu
chr1	16928126	G	C	0.00958	NBPF1	-	FALSE	MLT1E3	SINE,Alu
chr3	63996227	G	T	0.00114	PSMD6-AS2,PSMD6	+,-	FALSE
chr1	222906426	T	C	0.00322	BROX	+	FALSE	AluSx	SINE,Alu
chr2	128950497	A	G	4.96654E-06	UGGT1	+	TRUE	AluSc	SINE,Alu
chr2	23926233	C	T	0.00907	KLHL29	+	FALSE
chr1	1683565	G	A	0.00269	NADK	-	FALSE
chr1	145689271	A	G	0.00250	NBPF20,NBPF10	+	FALSE
chr7	6442891	G	A	0.00134	RAC1	+	FALSE
chr2	86252112	T	C	0.00233	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	1653093	A	G	0.00642	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr16	75479467	T	C	0.00160	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr14	19687172	C	T	0.00389	DUXAP10	+	FALSE
chr1	144014068	T	C	0.00118		.	FALSE
chr4	101946459	C	T	0.00245	PPP3CA	-	FALSE	(T)n	SINE,Alu
chr1	6583270	C	G	0.00026	NOL9	-	FALSE
chr8	117858601	T	A	0.00891	RAD21	-	FALSE
chr1	92862764	A	G	0.00415		.	FALSE	AluJr	SINE,Alu
chr1	148252049	A	C	0.00493	NBPF8,NBPF14,NBPF9	-	FALSE
chr3	133538762	A	T	0.00804	SRPRB	+	FALSE
chr1	89522646	G	C	0.00159	GBP1	-	FALSE
chr1	21545089	C	T	0.00010	ECE1	-	FALSE	AluSx1	SINE,Alu
chr1	28825433	A	G	0.00019	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	16892918	T	C	0.00158	NBPF1	-	FALSE
chr2	70506337	T	C	0.00313	PCYOX1	+	FALSE
chr3	105258861	A	G	0.00030	ALCAM	+	FALSE
chr1	38327584	T	C	0.00017	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr9	140174976	G	T	0.00045	TOR4A	+	FALSE
chr1	11846104	C	T	0.00297	C1orf167,MTHFR	+,-	FALSE	L1ME4a	SINE,Alu
chr17	5288083	T	A	0.00232	RABEP1	+	FALSE
chr4	109551183	T	A	0.00270	RPL34	+	FALSE
chr2	113334178	A	T	0.00654	POLR1B	+	FALSE	L1MA10	SINE,Alu
chr7	102004769	T	G	5.29897E-05	LOC100289561,LOC100630923	+	FALSE
chr2	37329331	T	C	0.00343		.	FALSE	AluJr4	SINE,Alu
chr1	201846630	C	A	0.00041	IPO9	+	FALSE	(CA)n	SINE,Alu
chr14	31916783	T	C	3.40362E-05	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	145512074	A	G	0.00014	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	124774432	T	G	0.00754	HEG1	-	FALSE
chr12	98942621	A	G	4.05531E-12	TMPO	+	TRUE	AluSc	SINE,Alu
chr14	19686228	C	T	0.00106	DUXAP10	+	FALSE
chr1	184663581	T	C	0.00265	EDEM3	-	FALSE
chr15	59952905	A	G	0.00150	BNIP2	-	FALSE
chr1	22159774	G	A	0.00257	HSPG2	-	FALSE
chr2	85776508	A	T	0.00747	GGCX	-	FALSE	AluSz6	SINE,Alu
chr1	89477559	C	T	0.00044	GBP3	-	FALSE
chr3	12877522	A	T	0.00956	RPL32	-	FALSE
chr3	15114353	T	C	8.61483E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr17	65334868	T	C	0.00096	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	205737659	C	T	0.00024	RAB29	-	FALSE	AluSq2	SINE,Alu
chr1	3703611	A	C	0.00208	LRRC47	-	FALSE
chr1	179327011	A	G	0.00930	SOAT1	+	TRUE
chr1	100440563	A	G	0.00732	SLC35A3	+	FALSE	AluJb	SINE,Alu
chr1	6282324	T	C	0.00013	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	6259433	G	A	0.00493	RPL22	-	FALSE	G-rich	SINE,Alu
chr1	201860626	A	G	0.00599	SHISA4	+	FALSE
chr1	153909069	G	C	5.11201E-05	DENND4B	-	FALSE
chr7	128829066	A	G	0.00816	SMO	+	FALSE
chr1	116943511	T	C	0.00236	ATP1A1,ATP1A1-AS1	+,-	FALSE
chr5	115165731	T	C	0.00410	ATG12	-	TRUE	AluSq2	SINE,Alu
chr1	143189473	C	A	0.00626	LOC102723769	-	FALSE
chr2	37327590	T	C	0.00364		.	FALSE
chr5	180682612	A	T	0.00235	CTC-338M12.4	+	FALSE
chr15	102512797	A	G	0.00080	WASH3P	+	FALSE
chr1	899810	G	A	3.12519E-10	KLHL17	+	FALSE
chr10	115526177	A	G	0.00237	PLEKHS1	+	FALSE
chr1	120163248	G	A	0.00204	ZNF697	-	FALSE
chr1	28661576	A	G	0.00021	MED18	+	TRUE	AluSg	SINE,Alu
chr1	1594498	C	T	0.00024	CDK11B,SLC35E2B	-	FALSE
chr5	125961554	A	G	0.00355	PHAX	+	TRUE	AluSz6	SINE,Alu
chr2	152334349	A	G	0.00171		.	FALSE	AluSq	SINE,Alu
chr21	34728095	A	G	8.47848E-05	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr1	207943325	A	G	0.00158	CD46	+	TRUE	AluSx1	SINE,Alu
chr1	33148691	A	G	2.12433E-06	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	33145989	A	T	0.00548	SYNC,RBBP4	+,-	FALSE
chr1	16722111	C	T	0.00453	SZRD1	+	FALSE	(TTTT)n	SINE,Alu
chr8	146200283	T	C	0.00082	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr2	217366590	A	G	0.00013		.	FALSE	AluSz	SINE,Alu
chr1	33149414	A	G	0.00722	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr6	111348022	A	T	2.41155E-06	RPF2	+	FALSE
chr1	6583066	T	C	0.00209	NOL9	-	TRUE	AluSx4	SINE,Alu
chr5	175811091	G	A	0.00592	NOP16	-	FALSE
chr3	101405564	G	A	0.00354		.	FALSE
chr1	209602381	G	A	0.00057	MIR205HG	+	FALSE	AluJb	SINE,Alu
chr3	156258295	T	C	0.00096	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	145688682	A	C	0.00468	NBPF20,NBPF10,RNF115	+	FALSE
chr2	50148477	C	T	0.00741	NRXN1	-	FALSE
chr1	46076462	A	G	0.00730	NASP	+	TRUE	AluSx	SINE,Alu
chr1	172411768	T	C	0.00416	C1orf105,PIGC	+,-	FALSE
chr1	988503	A	T	0.00402	AGRN	+	FALSE
chr1	3545192	C	G	0.00600	TPRG1L	+	FALSE
chr1	214524566	T	C	0.00040	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	35817025	T	A	0.00987	ZMYM4	+	FALSE
chr1	36068295	T	C	0.00058	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	9162348	T	C	0.00023		.	FALSE	AluSx	SINE,Alu
chr19	46053316	T	C	4.53847E-05	OPA3	-	TRUE	AluSx1	SINE,Alu
chr5	122359499	C	A	0.00277	PPIC	-	FALSE	(AC)n	SINE,Alu
chr3	10192827	A	G	1.26958E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr20	43707759	A	G	0.00090	STK4	+	TRUE	AluJb	SINE,Alu
chr1	155868177	G	A	7.38851E-05	RIT1	-	FALSE
chrX	77084017	T	C	0.00179	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	79126336	C	G	1.94494E-06	IFI44	+	FALSE
chr1	244572643	C	A	0.00560	ADSS	-	FALSE
chr2	160625969	T	C	0.00527	LY75-CD302,CD302	-	TRUE	AluSz	SINE,Alu
chr5	125961509	A	G	0.00141	PHAX	+	TRUE	AluSz6	SINE,Alu
chr4	2517223	A	G	2.74855E-08	RNF4	+	FALSE
chr11	4159457	A	G	0.00764	RRM1	+	FALSE
chr19	19792403	A	G	1.20818E-05	ZNF101	+	TRUE	AluJb	SINE,Alu
chr1	16889413	T	C	8.21040E-06	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr17	73886219	T	C	8.52474E-05	TRIM65	-	TRUE	FRAM	SINE,Alu
chr2	227597697	G	T	0.00890	IRS1	-	FALSE
chr19	39926509	A	C	0.00986	RPS16	-	FALSE
chr2	64327544	G	T	0.00917	PELI1	-	FALSE
chr2	217366803	A	G	0.00914		.	FALSE	AluSz6	SINE,Alu
chr1	53291408	A	G	0.00931	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	46032311	A	G	0.00340	AKR1A1	+	FALSE
chr1	33148210	A	G	0.00778	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr3	40577810	A	G	0.00896	ZNF621	+	TRUE	AluSz	SINE,Alu
chr11	490771	C	T	0.00600	PTDSS2	+	FALSE
chr11	9602076	T	C	7.58058E-05	WEE1	+	FALSE	AluSg	SINE,Alu
chr2	37330431	T	C	0.00231		.	FALSE	AluSq2	SINE,Alu
chr3	136667405	T	C	0.00190	NCK1	+	FALSE
chr1	156219450	A	G	0.00753	SMG5	-	FALSE
chr3	14986447	T	C	2.03372E-08	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	120612006	G	A	0.00602	NOTCH2	-	FALSE
chr6	143382538	A	T	0.00145	AIG1	+	FALSE
chr15	42192345	T	C	0.00039	EHD4	-	TRUE
chr20	35520223	T	C	0.00111	TLDC2	+	FALSE	AluSx3	SINE,Alu
chr2	192699639	A	G	0.00017	SDPR	-	FALSE
chr15	43698008	C	T	0.00175	TUBGCP4	+	FALSE	AluSp	SINE,Alu
chr1	114519351	T	G	0.00773	HIPK1	+	FALSE
chr1	25688276	A	G	0.00015	TMEM50A	+	FALSE
chr1	114443608	A	G	0.00147	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr1	209605640	A	C	0.00581	MIR205HG	+	FALSE	(AGC)n	SINE,Alu
chrX	54587254	A	G	0.00019	GNL3L	+	TRUE	AluSq2	SINE,Alu
chr4	39551975	T	C	5.31269E-07	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr19	53997266	A	G	0.00173	ZNF813	+	FALSE	L1M3	SINE,Alu
chr2	191556847	G	T	9.96724E-06	NAB1	+	FALSE
chr6	42061234	T	C	0.00170		.	FALSE	AluSx1	SINE,Alu
chr1	167511256	T	C	0.00838	CREG1	-	FALSE
chr17	7482325	T	A	5.04428E-06		.	FALSE
chr3	112720117	G	T	0.00125	GTPBP8	+	FALSE
chr3	141667632	T	G	1.45044E-05	TFDP2	-	FALSE
chr1	109855150	A	C	0.00062	SORT1	-	FALSE	A-rich	SINE,Alu
chr2	217366673	A	G	0.00517		.	FALSE	AluSz	SINE,Alu
chr5	162902516	T	C	0.00226	HMMR	+	FALSE
chr2	196999051	C	G	0.00403	STK17B	-	FALSE	MER1B	SINE,Alu
chr1	208198625	C	T	8.83580E-05	PLXNA2	-	FALSE
chr1	16912029	C	G	0.00177	NBPF1	-	FALSE
chr1	28836912	A	G	3.63020E-05	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	33147942	A	G	0.00423	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr1	36531781	G	A	0.00288		.	FALSE
chr1	1595388	A	G	0.00135	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr2	68402154	A	T	0.00991	PNO1	+	FALSE
chr11	94863483	C	T	0.00501	ENDOD1	+	FALSE
chr7	17384395	A	G	0.00856	AHR	+	TRUE	AluSx	SINE,Alu
chr1	26608014	C	A	0.00328		.	FALSE
chr1	24022910	G	A	0.00702	RPL11	+	FALSE
chr7	77409288	A	G	7.47972E-05		.	FALSE	AluSc	SINE,Alu
chr2	54858511	C	T	0.00124	SPTBN1	+	FALSE
chr11	118888992	C	G	0.00222	RPS25	-	FALSE
chr1	66838733	A	C	0.00086	PDE4B	+	FALSE
chr1	16929100	C	T	0.00911	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr4	10076959	C	G	6.37978E-10	WDR1	-	FALSE
chr1	78184325	A	G	0.00150	USP33	-	FALSE
chr5	132232315	G	A	0.00573	AFF4	-	FALSE
chr1	145100772	A	G	0.00945	NBPF20,SEC22B	+	TRUE	AluSg4	SINE,Alu
chr22	37962318	T	C	0.00884	CDC42EP1	+	FALSE
chr1	16935130	C	T	0.00019	NBPF1	-	FALSE
chr12	7052982	T	G	0.00199	C12orf57	+	FALSE	U7	SINE,Alu
chrX	71492446	A	T	0.00281		.	FALSE
chr2	61277775	A	G	0.00640	PEX13	+	TRUE	AluY	SINE,Alu
chr14	105270483	G	T	7.92193E-06	ZBTB42	+	FALSE
chr7	20177525	T	C	0.00052	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr1	9163334	T	C	0.00074		.	FALSE	AluSp	SINE,Alu
chr1	93827991	A	C	0.00533	DR1	+	FALSE
chr2	32532840	A	G	0.00243		.	FALSE	AluSx1	SINE,Alu
chr1	145500920	T	A	0.00286	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	38411445	G	A	0.00625	INPP5B	-	FALSE
chr1	161141432	C	G	0.00508	B4GALT3	-	FALSE
chr1	134370	T	C	0.00327		.	FALSE	AluSg	SINE,Alu
chr1	36770607	T	C	0.00171	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	32373854	A	T	0.00096	PTP4A2	-	FALSE
chr2	206986233	T	C	0.00109		.	FALSE	AluSz	SINE,Alu
chr5	37291636	T	C	0.00518		.	FALSE	AluSx3	SINE,Alu
chr10	65380587	A	G	0.00344	REEP3	+	FALSE
chr8	56985610	A	T	0.00041	RPS20	-	FALSE
chr15	90375419	T	C	0.00521	C15orf38-AP3S2,AP3S2	-	TRUE	AluJr	SINE,Alu
chr9	136217449	C	G	0.00158	RPL7A	+	FALSE
chr2	55516939	G	T	0.00628	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	23636016	T	G	0.00796	HNRNPR	-	FALSE
chr3	45721891	A	G	0.00163	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr11	19245854	T	C	0.00078	E2F8	-	FALSE
chr2	242164677	A	G	0.00117	ANO7	+	TRUE	AluSg	SINE,Alu
chr2	20401856	T	G	0.00265	SDC1	-	FALSE
chr19	11256697	T	C	0.00039	SPC24	-	TRUE	AluJr4	SINE,Alu
chr3	47386062	T	A	4.63678E-05	KLHL18	+	FALSE
chr1	45279903	C	T	0.00052		.	FALSE	(TCTT)n	SINE,Alu
chr1	28835201	C	T	0.00371	SNHG3,RCC1,SNORA73B	+	FALSE	U17	SINE,Alu
chr1	117648269	G	A	0.00988		.	FALSE	AluSz6	SINE,Alu
chr4	9909923	G	A	0.00416	SLC2A9	-	FALSE
chr3	141879810	T	C	0.00784	GK5	-	FALSE	AluJr	SINE,Alu
chr2	216903621	T	C	0.00611	PECR	-	TRUE	AluSx3	SINE,Alu
chr1	46075663	A	G	0.00068	NASP	+	TRUE	AluSx4	SINE,Alu
chr5	35878249	G	A	0.00421	IL7R	+	FALSE
chr17	79514129	G	A	0.00164	FAAP100	-	FALSE
chr2	172178588	T	C	0.00248	METTL8	-	TRUE	AluSx3	SINE,Alu
chr5	37290554	T	C	7.20052E-07		.	FALSE	AluSz	SINE,Alu
chr1	1252687	T	C	0.00459	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	152884246	G	T	0.00536	IVL	+	FALSE
chr1	32801724	T	G	0.00816	MARCKSL1	-	FALSE
chr5	96366326	G	C	0.00120		.	FALSE	(TG)n	SINE,Alu
chr5	137891109	C	G	0.00031	HSPA9	-	FALSE
chr4	119553307	T	C	0.00096	LOC729218	+	FALSE

RBP	SERBP1
Knock-Method	shRNA
RBP Family	HABP4_PAI-RBP1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR820ROH
Platform	HiSeq
Pubmed ID	32252787

SERBP1 - Target Gene Network