RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	206580231	A	G	0.00100	SRGAP2	+	FALSE
chr1	120695049	G	A	0.00129		.	FALSE
chr1	10368093	C	A	0.00131	KIF1B	+	FALSE
chr15	33064791	G	A	0.00203	FMN1	-	FALSE
chr1	10438014	A	C	0.00046	KIF1B	+	FALSE
chr8	143352528	A	C	0.00312	TSNARE1	-	FALSE
chr1	26755291	A	G	0.00044	LIN28A	+	TRUE	AluSx1	SINE,Alu
chr2	74348998	A	G	0.00279		.	FALSE	AluSz	SINE,Alu
chr17	57279258	A	G	0.00095	PRR11	+	TRUE	AluSq2	SINE,Alu
chr17	48771486	G	A	0.00081	ANKRD40	-	FALSE	AluSz	SINE,Alu
chr1	9161366	T	C	0.00189		.	FALSE	AluSx	SINE,Alu
chr1	74672474	G	A	0.00150	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr1	10519064	T	C	0.00515		.	FALSE	AluSx3	SINE,Alu
chr1	20826784	T	C	0.00204	MUL1	-	FALSE
chr1	16932495	A	C	0.00385	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr4	7765043	G	A	0.00071	AFAP1,AFAP1-AS1	+,-	FALSE
chr5	81571878	A	T	8.61300E-05	RPS23	-	FALSE
chr6	42856905	A	G	4.80826E-12	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr5	126889370	C	T	0.00713	PRRC1	+	FALSE
chr1	10521238	T	C	0.00096	DFFA	-	TRUE	AluY	SINE,Alu
chr1	22186113	T	G	0.00083	HSPG2	-	FALSE
chr2	10270757	A	T	0.00382	RRM2	+	FALSE
chr10	129216658	T	C	0.00710	DOCK1	+	FALSE
chr6	90344222	T	C	0.00451	LYRM2	-	TRUE	AluJo	SINE,Alu
chr12	124146077	A	G	1.08379E-05	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr2	37331275	T	C	0.00884		.	FALSE	AluSx1	SINE,Alu
chr1	168169452	G	A	0.00600	TIPRL	+	FALSE
chr3	15113655	T	C	0.00025	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	145281656	A	T	0.00839	NBPF20,NOTCH2NL	+	FALSE
chr1	45671429	G	A	0.00054	ZSWIM5	-	FALSE
chr6	29857113	C	A	0.00582		.	FALSE
chr1	10518756	T	C	0.00323		.	FALSE	AluSx1	SINE,Alu
chr7	64435678	T	A	0.00256	ZNF117	-	FALSE
chr1	143399383	T	A	0.00053		.	FALSE	L1MC4	SINE,Alu
chr14	20923558	A	C	0.00373	APEX1	+	FALSE
chr2	198255334	A	T	0.00551		.	FALSE
chr1	183218870	G	T	0.00338	NMNAT2	-	FALSE
chr2	160624383	A	T	0.00142	MARCH7	+	FALSE
chr1	143398850	G	T	0.00639		.	FALSE
chr1	46828460	C	T	0.00101	NSUN4	+	FALSE
chr11	118888992	C	G	0.00222	RPS25	-	FALSE
chr1	210004199	C	G	0.00531	DIEXF	+	FALSE
chr3	195963399	G	A	0.00341		.	FALSE
chr10	96090672	A	G	0.00018		.	FALSE
chr1	19586501	A	G	0.00288	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	54896390	G	T	0.00110	SPTBN1	+	FALSE
chr2	37330576	T	C	0.00055		.	FALSE	AluSq2	SINE,Alu
chr1	9329105	T	A	0.00233	H6PD	+	FALSE
chr3	99516879	A	T	7.79377E-13	MIR548G	-	FALSE
chr12	133298069	A	G	6.69127E-09	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	36602178	A	T	0.00764	TRAPPC3	-	FALSE
chr1	203822584	T	C	5.41257E-07	ZC3H11A	+	FALSE
chr12	51325349	C	G	0.00225	METTL7A	+	FALSE	AluSq2	SINE,Alu
chr19	24104018	A	G	0.00543	ZNF726	+	FALSE	AluSg4	SINE,Alu
chr6	96054540	G	T	0.00358	MANEA	+	FALSE
chr16	81064543	A	G	0.00066	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	15993013	G	A	1.16652E-10		.	FALSE
chr1	145509570	A	G	0.00043	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr7	25161424	T	C	0.00669	CYCS	-	TRUE	AluSz6	SINE,Alu
chr2	86252214	T	C	0.00930	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr9	132268259	A	G	0.00032	LINC00963	+	TRUE	AluJb	SINE,Alu
chr1	16889864	C	A	0.00063	NBPF1	-	FALSE
chr1	31342374	A	C	0.00446	SDC3	-	FALSE	(A)n	SINE,Alu
chr1	24295888	T	A	0.00240		.	FALSE
chr19	11256689	T	C	9.47404E-06	SPC24	-	TRUE	AluJr4	SINE,Alu
chr3	14986098	T	C	3.23580E-05	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr19	58357268	A	G	0.00099	ZNF587B	+	TRUE	AluSx3	SINE,Alu
chr2	37431485	A	G	0.00339	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr3	195242526	C	T	3.14972E-05	PPP1R2	-	FALSE
chr4	189020293	G	A	0.00361	TRIML2	-	FALSE
chr12	98943033	A	G	0.00346	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	1447756	G	C	0.00354	ATAD3A	+	FALSE
chr1	144930596	C	A	0.00578	NBPF20,PDE4DIP	+,-	FALSE
chr2	143638994	G	A	0.00075	KYNU	+	FALSE
chr1	197070776	C	T	0.00600	ASPM	-	FALSE
chr1	63881552	C	T	0.00293	ALG6	+	FALSE
chr6	38140505	A	G	0.00109	BTBD9	-	FALSE
chr19	36033460	C	T	0.00622	GAPDHS,TMEM147-AS1	+,-	FALSE
chr5	93018883	A	T	0.00181	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr8	101932094	T	A	0.00288	YWHAZ	-	FALSE	MER34B-int	SINE,Alu
chr12	53807911	A	T	0.00355	SP1	+	FALSE
chr5	290174	C	T	0.00083	PDCD6	+	FALSE
chr1	36531942	A	G	0.00042		.	FALSE	AluSq2	SINE,Alu
chr9	138798859	C	A	0.00291	CAMSAP1	-	FALSE
chr1	154128839	G	T	0.00579	TPM3	-	FALSE
chr3	88104167	T	C	0.00919	CGGBP1	-	FALSE
chr2	10198113	C	A	0.00893	CYS1	-	FALSE
chr1	31838550	T	A	0.00595	FABP3	-	FALSE
chr8	30536015	T	C	0.00286	GSR	-	TRUE	AluJr	SINE,Alu
chr1	160302244	T	C	0.00310	COPA	-	TRUE
chr1	9163383	T	C	0.00383		.	FALSE	AluSp	SINE,Alu
chr2	61150192	C	A	0.00436	REL	+	FALSE	AluSz6	SINE,Alu
chr6	26095454	A	G	0.00284	HFE	+	TRUE	AluY	SINE,Alu
chr1	11722350	C	A	0.00355	FBXO44	+	FALSE	OldhAT1	SINE,Alu
chr1	36068295	T	C	0.00393	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	144851537	A	G	0.00275	NBPF20,PDE4DIP	+,-	FALSE
chr5	40830050	T	C	0.00042		.	FALSE	AluSp	SINE,Alu
chr4	128758175	A	G	0.00385		.	FALSE	AluSx	SINE,Alu
chr8	17503270	G	C	0.00410	MTUS1	-	FALSE
chr16	11929653	C	T	0.00333	RSL1D1	-	FALSE	LTR14B	SINE,Alu
chr2	70316226	A	C	0.00426	PCBP1	+	FALSE
chr1	53712727	C	T	0.00313	LRP8	-	FALSE
chr1	53288870	A	G	0.00501	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	204524866	A	G	0.00369	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	16918734	G	C	0.00600	NBPF1	-	FALSE
chr1	33148196	A	G	0.00054	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr8	30536450	T	C	8.74573E-07	GSR	-	TRUE	AluSp	SINE,Alu
chr1	120165038	A	G	0.00926	ZNF697	-	FALSE
chr5	149763305	A	G	0.00640	TCOF1	+	FALSE
chr20	29631627	T	C	0.00040	FRG1BP	+	FALSE
chr1	22854928	A	G	0.00258	ZBTB40	+	FALSE	A-rich	SINE,Alu
chr2	61276758	A	G	0.00924	PEX13	+	TRUE	AluSp	SINE,Alu
chr4	120219239	T	A	0.00707	C4orf3	-	FALSE
chr1	200521297	C	T	0.00133	KIF14	-	FALSE	(T)n	SINE,Alu
chr1	244572644	G	C	0.00088	ADSS	-	FALSE
chr3	45722047	A	G	0.00085	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr2	191556842	T	A	0.00812	NAB1	+	FALSE
chr1	161559407	A	G	0.00237	FCGR2C	+	FALSE
chr22	18572730	A	G	6.64824E-05	PEX26	+	TRUE	AluYf1	SINE,Alu
chr2	196999052	C	G	0.00358	STK17B	-	FALSE	MER1B	SINE,Alu
chr1	11187199	G	T	0.00047	MTOR	-	FALSE
chr3	15112612	T	C	0.00634	RBSN	-	TRUE	AluSq2	SINE,Alu
chr14	74526976	T	C	1.13179E-06	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr1	27426756	A	G	0.00384	SLC9A1	-	FALSE
chr1	46075663	A	G	0.00543	NASP	+	TRUE	AluSx4	SINE,Alu
chr5	151041873	A	G	0.00136	SPARC	-	FALSE
chr13	46700519	C	A	0.00089	LCP1	-	FALSE
chr1	146495574	C	T	0.00085	LOC728989	-	FALSE
chr5	79923361	T	C	0.00050	DHFR	-	TRUE	AluJr	SINE,Alu
chr7	30536611	T	C	0.00421	GGCT	-	FALSE
chr3	178741082	A	C	5.87013E-06	ZMAT3	-	FALSE
chr2	55462102	A	G	0.00026	RPS27A	+	FALSE
chr17	73702478	G	C	8.31704E-05	SAP30BP	+	FALSE
chr1	242012149	C	T	0.00334	EXO1	+	FALSE
chr7	55433884	A	C	0.00723	LANCL2	+	FALSE
chr15	33064461	C	T	0.00653	FMN1	-	FALSE
chr2	204162597	A	G	0.00296	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr3	10192838	A	G	1.36876E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	86117191	T	C	1.34616E-06	ZNHIT6	-	TRUE	AluSg	SINE,Alu
chr12	133298095	A	G	0.00081	PGAM5	+	TRUE	AluJo	SINE,Alu
chr14	75202544	A	G	3.08187E-07	FCF1	+	TRUE	AluSc	SINE,Alu
chr8	145139727	C	T	0.00458	GPAA1	+	FALSE
chr9	115446659	T	C	0.00410	INIP	-	TRUE	AluJr	SINE,Alu
chr2	128601464	T	C	0.00161		.	FALSE	AluJr	SINE,Alu
chr1	46662492	G	A	9.93078E-05	POMGNT1	-	FALSE
chr1	27204436	T	C	1.54117E-06		.	FALSE	AluSg7	SINE,Alu
chr12	98942643	A	G	3.59360E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	327407	A	G	0.00752		.	FALSE
chr1	145322843	C	T	0.00271	NBPF20,NBPF10	+	FALSE
chr3	169988286	C	T	0.00029	PRKCI	+	FALSE
chr1	11734730	C	T	7.77156E-16	MAD2L2	-	FALSE
chr4	2940085	T	C	0.00801	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	160967856	T	C	0.00100	F11R	-	TRUE	AluSp	SINE,Alu
chr1	183112505	T	C	0.00525	LAMC1	+	FALSE
chr1	23636016	T	G	0.00796	HNRNPR	-	FALSE
chr1	100150196	A	G	0.00176	PALMD	+	TRUE	AluJr	SINE,Alu
chr1	46075604	A	G	0.00365	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	6585331	T	C	0.00779	NOL9	-	TRUE	FAM	SINE,Alu
chr1	53289852	A	G	0.00228	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr4	120979130	T	C	0.00729		.	FALSE	AluSg4	SINE,Alu
chr1	21544601	C	T	0.00196	ECE1	-	FALSE
chr2	69548320	C	T	7.68354E-05	GFPT1	-	FALSE
chr1	183218871	G	T	0.00025	NMNAT2	-	FALSE
chr2	106510201	C	A	0.00638	NCK2	+	FALSE
chr1	145369498	A	G	0.00700	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr1	10517513	T	C	0.00982		.	FALSE	AluSx1	SINE,Alu
chr1	19542631	T	C	0.00741	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr3	39138082	C	T	8.26379E-05	WDR48	+	FALSE
chr12	21654407	G	A	0.00654	RECQL	-	FALSE
chr1	19542250	T	C	0.00859	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	32535865	A	G	0.00684		.	FALSE	AluJb	SINE,Alu
chr1	144594107	C	G	0.00706	NBPF20	+	FALSE
chr1	1421531	C	A	0.00409	ATAD3B	+	FALSE
chr9	133777993	G	T	0.00959	FIBCD1	-	FALSE
chr1	1252468	T	C	0.00182	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr1	120611964	G	C	0.00130	NOTCH2	-	FALSE
chr4	119553307	T	C	0.00096	LOC729218	+	FALSE
chr2	102484489	A	C	0.00281	MAP4K4	+	FALSE
chr1	67518534	C	T	0.00682	SLC35D1	-	FALSE
chr3	68685888	G	A	0.00280		.	FALSE
chr1	65147002	C	T	6.62669E-07	CACHD1	+	FALSE
chr3	124948047	C	G	0.00670	ZNF148	-	FALSE
chr1	168218522	A	G	0.00073		.	FALSE	AluSz	SINE,Alu
chr1	19542401	T	C	0.00052	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr4	2841893	A	G	0.00974	SH3BP2	+	TRUE	AluJb	SINE,Alu
chr1	225974592	T	G	2.09928E-05	SRP9	+	FALSE	AluJr	SINE,Alu
chr2	128952015	A	G	0.00086	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr17	40176809	A	T	0.00860	NKIRAS2	+	FALSE	AluSz	SINE,Alu
chr1	108742123	C	G	1.29742E-06	SLC25A24	-	FALSE
chr3	49067809	T	A	0.00022	QRICH1	-	FALSE
chr1	6282371	T	C	0.00054	ICMT	-	TRUE	AluSz	SINE,Alu
chr13	31033316	T	A	0.00497	HMGB1	-	FALSE
chr5	178986978	C	G	0.00341	RUFY1	+	FALSE
chr1	143915879	A	C	0.00097		.	FALSE
chr4	185309405	A	G	0.00035	IRF2	-	FALSE
chr1	32681797	C	T	0.00791	DCDC2B,TMEM234	+,-	FALSE
chr1	148556753	G	A	0.00472		.	FALSE
chr10	63954812	A	C	0.00641	RTKN2	-	FALSE
chr2	61277776	A	G	0.00178	PEX13	+	TRUE	AluY	SINE,Alu
chr1	113212976	C	T	0.00043	CAPZA1	+	FALSE
chr9	96438974	C	G	0.00083	PHF2	+	FALSE	(CTCCAC)n	SINE,Alu
chr2	37330612	T	C	0.00030		.	FALSE	AluSq2	SINE,Alu
chr1	3545192	C	G	0.00332	TPRG1L	+	FALSE
chr1	26608015	T	A	3.80922E-07		.	FALSE
chr1	10520683	T	C	0.00058	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	11846104	C	T	0.00297	C1orf167,MTHFR	+,-	FALSE	L1ME4a	SINE,Alu
chr3	48787052	T	C	0.00866	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	204521616	A	G	0.00455	MDM4	+	TRUE	AluSg	SINE,Alu
chr3	196670098	T	C	0.00019	NCBP2-AS2	+	FALSE
chr3	30733403	A	T	0.00840	TGFBR2	+	FALSE	(TA)n	SINE,Alu
chr1	3546137	A	C	0.00778	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr1	33961147	T	G	0.00196	ZSCAN20	+	FALSE
chr15	90819579	A	G	0.00933		.	FALSE	AluSx	SINE,Alu
chr1	35646125	C	T	0.00027	SFPQ	-	FALSE
chr1	9160900	T	C	0.00010		.	FALSE	AluJb	SINE,Alu
chr1	145293469	G	C	0.00888	NBPF20,NBPF10	+	FALSE
chr19	58371837	A	G	0.00329	ZNF587	+	TRUE	AluSz	SINE,Alu
chr6	74134823	T	C	0.00305		.	FALSE	AluSz	SINE,Alu
chr1	36068275	T	C	0.00625	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	195411498	G	A	0.00722	SDHAP2	+	FALSE
chr3	152882287	C	T	0.00774	RAP2B	+	FALSE
chr1	16889624	T	C	0.00614	NBPF1	-	TRUE
chr7	19736460	A	G	6.53378E-05	TWISTNB	-	FALSE	MER33	SINE,Alu
chr1	1252441	T	C	0.00602	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr2	132049915	A	G	0.00226	LOC440910	+	FALSE	AluSg4	SINE,Alu
chr1	19542310	T	C	0.00510	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	27101578	A	G	1.02706E-10	ARID1A	+	FALSE
chr2	25044957	G	A	0.00651	CENPO,ADCY3	+,-	FALSE
chr3	194789330	G	T	0.00150	XXYLT1	-	FALSE	AluJr	SINE,Alu
chr1	10517512	T	C	0.00498		.	FALSE	AluSx1	SINE,Alu
chr4	2940026	T	C	3.38773E-05	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr4	39551167	T	C	0.00361	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr19	11257634	T	C	0.00823	SPC24	-	TRUE	AluSp	SINE,Alu
chr2	217366803	A	G	0.00914		.	FALSE	AluSz6	SINE,Alu
chr1	20977380	T	C	0.00695	PINK1,PINK1-AS	+,-	FALSE
chr1	45976220	A	G	0.00031	MMACHC	+	TRUE
chr5	9549459	A	G	0.00783	SNHG18	+	FALSE
chr1	1252441	T	C	0.00086	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr1	6583474	T	C	0.00438	NOL9	-	TRUE	AluSq	SINE,Alu
chr3	137787047	C	T	0.00735	DZIP1L	-	FALSE
chr2	37429626	A	G	0.00385	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr19	9761591	T	C	0.00516	ZNF562	-	TRUE	AluSp	SINE,Alu
chr6	13788342	T	C	0.00454	MCUR1	-	TRUE	AluSx	SINE,Alu
chr2	162849312	G	C	0.00840	DPP4	-	FALSE
chr2	128603087	T	C	0.00036		.	FALSE	AluSp	SINE,Alu
chr6	42857057	A	G	0.00020	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr6	114182986	T	A	0.00316	MARCKS	+	FALSE
chr1	15990929	C	A	0.00202		.	FALSE	AluSx3	SINE,Alu
chr1	148252049	A	C	0.00666	NBPF8,NBPF14,NBPF9	-	FALSE
chr17	74560725	T	C	0.00476	SNHG16	+	FALSE	THE1B	SINE,Alu
chr10	89004545	T	C	0.00192	NUTM2A-AS1	-	FALSE	MSTA	SINE,Alu
chr1	52375677	T	C	0.00542	RAB3B	-	FALSE	MIRb	SINE,Alu
chr1	44818525	T	C	0.00442	ERI3	-	FALSE
chr1	110040310	A	G	2.45230E-05	CYB561D1	+	FALSE
chr1	35648711	A	C	0.00377	SFPQ	-	FALSE
chr1	25894472	C	G	0.00594	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr3	52084404	A	T	0.00032	DUSP7	-	FALSE	(A)n	SINE,Alu
chr1	144601045	C	T	0.00623	NBPF20	+	FALSE	L1MC2	SINE,Alu
chr1	12040479	T	C	0.00505	MFN2	+	FALSE
chr5	125962354	A	G	3.71532E-05	PHAX	+	TRUE	AluSc	SINE,Alu
chr1	65898873	G	C	0.00530	LEPR,LEPROT	+	FALSE
chr1	1255412	C	A	0.00751	CPSF3L	-	FALSE	(GCAGG)n	SINE,Alu
chr1	10520130	T	C	0.00355		.	FALSE	AluSx	SINE,Alu
chr1	77759578	A	G	0.00283	AK5	+	FALSE
chr1	26449882	A	G	0.00783	PDIK1L	+	FALSE
chr3	20025661	C	T	4.83976E-05	RAB5A,PP2D1	+,-	FALSE
chr2	24223291	A	G	0.00512	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	10520683	T	C	0.00790	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	211921702	T	C	0.00014	LPGAT1	-	FALSE
chr4	190883001	C	G	0.00319	FRG1	+	FALSE
chr1	16945409	T	A	0.00290	CROCCP2	-	FALSE
chr2	86850798	A	G	0.00267	RNF103-CHMP3,RNF103	-	FALSE
chr1	28261662	A	G	0.00872	SMPDL3B	+	FALSE
chr2	37331560	T	C	0.00040		.	FALSE	AluJb	SINE,Alu
chr4	1982726	C	T	0.00828	WHSC1	+	FALSE
chr3	196660052	G	A	0.00200	SENP5	+	FALSE	AluSz	SINE,Alu
chr1	17085028	G	A	0.00803	MST1L,LOC102724562	-	FALSE
chr19	7084638	A	G	0.00024	ZNF557	+	TRUE	AluJb	SINE,Alu
chr1	14106404	G	C	0.00156	PRDM2	+	FALSE
chr2	99813007	A	G	0.00027	MRPL30	+	TRUE	AluJb	SINE,Alu
chr4	17802819	T	C	0.00112	DCAF16	-	TRUE	AluSz	SINE,Alu
chr3	40578815	A	G	0.00041	ZNF621	+	FALSE	AluJr	SINE,Alu
chr1	145284138	G	A	0.00382	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr2	99812876	A	G	0.00394	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	24710405	A	G	0.00246	STPG1	-	FALSE
chr1	117910682	G	A	0.00013	MAN1A2	+	FALSE
chr1	11979815	A	C	0.00042	KIAA2013	-	FALSE
chr1	145311900	C	T	0.00011	NBPF20,NBPF10	+	FALSE
chr5	122165472	C	T	0.00147	SNX2	+	FALSE	(AC)n	SINE,Alu
chr1	204526727	A	G	0.00033	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	1650787	T	C	0.00590	CDK11B,CDK11A	-	FALSE
chr1	144606996	G	C	0.00107	NBPF20	+	FALSE
chr10	1086797	A	C	0.00499	IDI2-AS1,IDI1	+,-	FALSE
chr2	202032184	A	G	0.00954	CFLAR	+	FALSE	AluJo	SINE,Alu
chr1	65330637	C	T	0.00047	JAK1	-	FALSE
chr1	19578192	G	A	0.00778	MRTO4	+	FALSE
chr9	131570178	T	C	0.00767	TBC1D13	+	FALSE
chr1	78414329	G	A	0.00785	FUBP1	-	FALSE	A-rich	SINE,Alu
chr1	3545204	C	G	0.00829	TPRG1L	+	FALSE
chr5	81571669	C	T	0.00143	RPS23	-	FALSE
chr1	6283306	T	C	2.62084E-05	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	31905886	C	A	0.00702	SERINC2	+	FALSE
chr1	54692331	T	C	0.00549	SSBP3	-	FALSE	(T)n	SINE,Alu
chr1	54354935	G	C	0.00831	YIPF1	-	FALSE
chr1	26801736	A	T	0.00578	HMGN2	+	FALSE	(T)n	SINE,Alu
chr1	36067886	T	C	0.00150	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	205759960	C	T	4.24096E-05	SLC41A1	-	FALSE
chr15	91044377	T	C	0.00440	IQGAP1	+	FALSE
chr3	25777072	C	T	4.38639E-06	NGLY1	-	FALSE	L1MEg	SINE,Alu
chr3	186838874	G	A	0.00972	RPL39L	-	FALSE
chr2	85776590	T	C	0.00950	GGCX	-	TRUE	AluSz6	SINE,Alu
chr1	246714587	G	A	0.00023	TFB2M	-	FALSE
chr3	188597556	A	G	0.00309	LPP	+	FALSE
chr19	9673276	C	A	0.00085		.	FALSE	Tigger1	SINE,Alu
chr1	53289940	A	G	0.00245	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	10518797	T	C	0.00510		.	FALSE	AluSx1	SINE,Alu
chr1	153617980	A	G	8.13079E-05	CHTOP	+	FALSE
chr2	187544218	T	G	0.00796	ITGAV	+	FALSE
chr1	146647196	T	C	0.00241		.	FALSE	THE1D	SINE,Alu
chr1	31345067	G	T	0.00804	SDC3	-	FALSE
chr2	232319610	A	T	0.00029	NCL	-	FALSE
chr3	5257971	C	T	7.48062E-05	EDEM1	+	FALSE
chr2	131131424	G	C	0.00845	PTPN18	+	FALSE
chr2	129023282	G	C	0.00170	HS6ST1	-	FALSE
chr1	156565049	A	C	0.00169	GPATCH4	-	FALSE
chr4	57326131	A	G	0.00164	PAICS	+	TRUE	AluJr	SINE,Alu
chr22	18571345	A	G	0.00113	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	117645998	A	G	0.00434		.	FALSE
chr7	29961437	T	G	6.91541E-06	SCRN1	-	FALSE
chr1	6257826	T	C	0.00560	RPL22	-	FALSE
chr3	11596302	T	C	0.00110	ATG7	+	FALSE
chr2	1637201	C	T	5.10703E-15	PXDN	-	FALSE
chr3	14986104	T	C	0.00992	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	145688665	T	A	0.00015	NBPF20,NBPF10,RNF115	+	FALSE
chr1	6614230	G	A	0.00509	NOL9	-	FALSE
chr10	79800437	T	A	0.00445	RPS24	+	FALSE
chr1	154438880	T	C	0.00170	IL6R	+	FALSE
chr5	177019207	T	G	0.00584	TMED9	+	FALSE
chr1	227211026	C	G	0.00373	CDC42BPA	-	FALSE
chr2	128952006	A	G	0.00701	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	19542463	T	C	0.00746	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr4	123816376	A	T	0.00445	FGF2,NUDT6	+,-	FALSE
chr4	129924977	C	A	0.00760	SCLT1	-	FALSE
chr1	26138325	G	A	0.00027	SEPN1	+	FALSE
chr2	73480136	T	A	0.00281	CCT7	+	FALSE
chr20	35520935	T	C	0.00120	TLDC2,SAMHD1	+,-	FALSE	FLAM_A	SINE,Alu
chr3	15112501	T	C	2.98131E-05	RBSN	-	TRUE	AluSq2	SINE,Alu
chr5	170837887	T	A	0.00401	NPM1	+	FALSE
chr1	145290818	C	G	0.00287	NBPF20	+	FALSE
chr20	25428384	A	G	0.00195	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	46032311	A	G	0.00340	AKR1A1	+	FALSE
chr1	28824041	T	A	0.00872	PHACTR4	+	FALSE	AluSx	SINE,Alu
chr2	55462747	T	A	0.00163	RPS27A	+	FALSE
chr17	45761109	T	G	0.00018		.	FALSE
chr1	226172221	T	C	0.00030	SDE2	-	FALSE	L1MEf	SINE,Alu
chr1	229738170	T	G	0.00168	TAF5L	-	FALSE
chr1	45975345	A	G	0.00071	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr16	1411036	A	G	0.00766	GNPTG	+	TRUE	AluSz	SINE,Alu
chr2	75882576	T	C	0.00328	MRPL19	+	FALSE
chr17	58024275	A	G	0.00455	RPS6KB1	+	FALSE
chr1	213244381	G	A	0.00345	RPS6KC1	+	FALSE
chr1	15904318	C	T	0.00109	AGMAT	-	FALSE
chr7	66105163	C	G	0.00594	KCTD7	+	FALSE
chr4	6675519	A	C	0.00064	LOC105374366	-	FALSE
chr19	4423352	G	A	0.00087	CHAF1A	+	FALSE	GA-rich	SINE,Alu
chr1	1337738	C	A	4.14710E-05	MRPL20	-	FALSE
chr2	232319593	A	C	0.00348	NCL	-	FALSE	A-rich	SINE,Alu
chr5	170837890	C	A	0.00030		.	FALSE
chr1	1534205	G	A	1.69659E-11	FNDC10	-	FALSE
chr2	101587455	C	T	0.00178	NPAS2	+	FALSE
chr1	100548780	A	T	0.00791	MFSD14A	+	FALSE
chr3	53268235	A	C	0.00452	TKT	-	FALSE
chr14	20770036	T	C	0.00217	TTC5	-	FALSE
chr2	206981832	T	C	0.00251		.	FALSE	AluJb	SINE,Alu
chr5	52388460	A	T	0.00034	ITGA2	+	FALSE
chr1	21810903	A	G	0.00498	NBPF3	+	FALSE	L1MC4	SINE,Alu
chr1	46076462	A	G	1.23194E-07	NASP	+	TRUE	AluSx	SINE,Alu
chr2	188330285	G	T	0.00590	TFPI	-	FALSE
chr1	75230606	C	T	0.00077	TYW3	+	FALSE
chr5	133956668	G	A	0.00419	SAR1B	-	FALSE
chr1	2336210	C	T	0.00175	RER1	+	FALSE
chr1	16927369	C	T	0.00943	NBPF1	-	FALSE
chr7	99017241	C	A	0.00721	PTCD1,ATP5J2-PTCD1	-	FALSE
chr1	38326700	T	C	5.61462E-05	INPP5B	-	TRUE	AluJr	SINE,Alu
chr6	3021492	A	G	0.00613	HTATSF1P2	-	FALSE	Tigger3a	SINE,Alu
chr19	42376711	A	G	5.78075E-06		.	FALSE	AluSp	SINE,Alu
chr1	19542311	T	C	0.00682	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	40503729	A	G	5.91625E-05	RPL14	+	FALSE
chr2	38971640	A	C	0.00050	SRSF7	-	FALSE
chr1	21806710	T	G	0.00194	NBPF3	+	FALSE
chr1	55207985	G	A	0.00156	MROH7-TTC4,TTC4	+	FALSE
chr2	203744241	T	C	0.00511		.	FALSE	AluSx	SINE,Alu
chr6	116256595	C	A	5.71236E-05		.	FALSE
chr19	58374130	C	T	0.00124	ZNF587	+	FALSE
chr1	231468953	G	A	0.00085	EXOC8	-	FALSE
chr1	28662186	A	G	0.00403	MED18	+	TRUE	AluSq2	SINE,Alu
chr8	48889705	A	G	0.00339	MCM4	+	TRUE	AluSx3	SINE,Alu
chr1	214524496	T	C	0.00114	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	38463504	C	T	0.00068	FHL3	-	FALSE
chr1	16913612	G	A	0.00145	NBPF1	-	FALSE
chr1	67896040	G	A	1.31286E-05	SERBP1	-	FALSE
chr1	900720	A	T	0.00065	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr5	204215	A	G	0.00872		.	FALSE	MER68	SINE,Alu
chr1	32373837	G	T	0.00068	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr1	6582353	T	C	0.00121	NOL9	-	TRUE	AluSx1	SINE,Alu
chr16	48387296	A	G	0.00058	LONP2,MIR5095	+	TRUE	AluJb	SINE,Alu
chr1	19542310	T	C	9.10228E-06	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr17	41133090	A	T	0.00148	RUNDC1	+	FALSE
chr14	19684445	A	G	0.00351	DUXAP10	+	FALSE
chr5	180682610	T	C	0.00014	CTC-338M12.4	+	FALSE
chr1	44818529	T	C	0.00310	ERI3	-	FALSE
chr2	37328087	T	C	0.00335		.	FALSE
chr16	10623558	T	C	0.00103	EMP2	-	TRUE	AluSp	SINE,Alu
chr5	36687341	T	C	0.00930	SLC1A3	+	FALSE
chr1	10517313	T	C	0.00015		.	FALSE	AluJr	SINE,Alu
chr1	32373437	G	A	3.32434E-12	PTP4A2	-	FALSE
chr1	16893841	C	T	0.00272	NBPF1	-	FALSE
chr3	39453160	G	A	0.00000	RPSA	+	FALSE
chr1	144816555	C	T	0.00530	NBPF20,NBPF9	+	FALSE
chr5	68738649	A	T	0.00716		.	FALSE
chr12	133298417	A	G	0.00084	PGAM5	+	TRUE	AluSp	SINE,Alu
chr7	6202056	G	A	0.00019	CYTH3	-	FALSE
chr1	153909069	G	C	5.11201E-05	DENND4B	-	FALSE
chr1	179326847	A	G	0.00512	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	52817432	T	C	0.00518	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr1	36794250	A	G	0.00324		.	FALSE	AluJb	SINE,Alu
chr1	204095426	C	T	0.00481	SOX13	+	FALSE
chr1	35319605	A	C	0.00226	SMIM12	-	FALSE	AluSg	SINE,Alu
chr1	112170157	C	G	0.00335	RAP1A	+	FALSE	L1ME4a	SINE,Alu
chr6	42045563	A	G	4.21139E-05	TAF8	+	TRUE	AluSz	SINE,Alu
chr2	181737842	C	T	0.00350	SCHLAP1	+	FALSE
chr1	144955288	A	G	0.00574	NBPF20,PDE4DIP	+,-	FALSE
chr1	10517653	T	C	0.00228		.	FALSE	AluSx1	SINE,Alu
chr1	109817245	C	T	2.70011E-05	CELSR2	+	FALSE
chr1	145282799	G	A	0.00882	NBPF20,NOTCH2NL	+	FALSE
chr1	205737665	G	T	0.00078	RAB29	-	FALSE	AluSq2	SINE,Alu
chr1	10517623	T	C	0.00145		.	FALSE	AluSx1	SINE,Alu
chr13	76378459	T	C	0.00239	LMO7	+	FALSE
chr1	36535403	A	G	0.00320		.	FALSE	AluSx1	SINE,Alu
chr1	160966353	T	C	0.00385	F11R	-	TRUE	AluSg	SINE,Alu
chr19	1863170	G	A	0.00204	KLF16	-	FALSE
chr8	94935937	T	C	0.00338	PDP1	+	FALSE
chr21	44330047	A	G	0.00233		.	FALSE	AluSx3	SINE,Alu
chr3	52448770	A	G	0.00498	PHF7	+	TRUE	AluJb	SINE,Alu
chr2	37329307	T	C	0.00201		.	FALSE	AluJr4	SINE,Alu
chr1	10093371	C	T	0.00264	UBE4B	+	FALSE
chr15	90819444	A	G	5.90002E-05		.	FALSE	AluSx	SINE,Alu
chr17	42880118	T	C	0.00140	GJC1	-	TRUE	AluJb	SINE,Alu
chr2	206987223	T	C	0.00532		.	FALSE	AluSx	SINE,Alu
chr1	33139178	A	G	0.00108	RBBP4	+	TRUE	AluSx3	SINE,Alu
chr17	45219755	G	T	0.00592	CDC27	-	FALSE
chr3	176739663	A	G	5.46505E-07	TBL1XR1	-	FALSE

RBP	ABCF1
Knock-Method	shRNA
RBP Family	Non-canonical_RBP
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR610VTA
Platform	HiSeq
Pubmed ID	32252787

ABCF1 - Target Gene Network