RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr5	180663941	G	T	0.00166	RACK1	-	FALSE
chr1	46159823	T	A	0.00474	TMEM69	+	FALSE
chr1	33150598	T	C	4.12722E-05	SYNC,RBBP4	+,-	FALSE
chr3	39137793	C	T	0.00363	WDR48	+	FALSE
chr1	19585771	A	G	0.00029	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr4	119555142	A	G	4.95460E-05	LOC729218	+	FALSE
chr2	55516090	C	T	0.00643	CCDC88A	-	FALSE
chr1	982994	T	C	0.00432	AGRN	+	FALSE
chr1	150548881	G	A	9.52924E-05	MCL1	-	FALSE
chr9	131570178	T	C	0.00767	TBC1D13	+	FALSE
chr1	180082720	G	A	0.00577	CEP350	+	FALSE
chr1	11847902	C	A	0.00364	C1orf167,MTHFR	+,-	FALSE
chr1	1595540	T	C	0.00042	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr9	133579674	A	G	0.00018	EXOSC2	+	TRUE	AluSx3	SINE,Alu
chr10	98278593	A	T	0.00792	TM9SF3	-	FALSE
chr2	128952699	A	G	0.00497	UGGT1	+	TRUE	AluSp	SINE,Alu
chr6	30572804	C	T	2.81740E-06		.	FALSE
chr5	154196577	C	T	0.00906	LARP1	+	FALSE
chr17	4928356	A	G	0.00048	KIF1C	+	TRUE	AluSz	SINE,Alu
chr1	145284175	G	C	0.00481	NBPF20,NOTCH2NL	+	FALSE
chr1	46016687	T	C	0.00296	AKR1A1	+	FALSE
chr1	21940555	C	T	0.00907	RAP1GAP	-	FALSE
chr22	31375015	A	T	0.00990	TUG1	+	FALSE
chr1	16912085	T	C	0.00206	NBPF1	-	FALSE
chr4	2940125	T	C	4.75438E-05	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr12	96259951	G	A	0.00328	SNRPF	+	FALSE
chr3	119388380	T	C	0.00110	COX17	-	FALSE
chr1	214524178	T	C	0.00265	PTPN14	-	TRUE	AluSx	SINE,Alu
chr1	17393889	A	G	0.00390	PADI2	-	FALSE
chr2	101622886	T	A	0.00705	RPL31	+	FALSE
chr1	113001409	C	T	2.24539E-06	CTTNBP2NL	+	FALSE	AluJr	SINE,Alu
chr1	143398850	G	T	0.00639		.	FALSE
chr4	38945834	T	C	0.00287	FAM114A1	+	FALSE	AluSc	SINE,Alu
chr1	16576295	G	A	0.00139	FBXO42	-	FALSE	A-rich	SINE,Alu
chr1	74672640	T	A	0.00011	FPGT-TNNI3K,FPGT	+	FALSE
chr1	33149400	A	G	0.00407	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	246714587	G	A	0.00023	TFB2M	-	FALSE
chr1	16723840	G	A	0.00072	SZRD1	+	FALSE
chr1	19543247	T	C	0.00813	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	52306087	C	T	0.00022	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr1	28921019	A	G	0.00030	RAB42	+	TRUE	AluSx	SINE,Alu
chr1	36067760	T	C	0.00044	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	153643449	G	C	0.00704	ILF2	-	FALSE
chr7	2290637	C	T	0.00956	NUDT1	+	FALSE
chr3	69154343	C	G	0.00408	ARL6IP5	+	FALSE
chr3	169807548	T	C	0.00665	PHC3	-	TRUE	AluSx1	SINE,Alu
chr1	10520331	C	T	0.00527		.	FALSE	AluSx1	SINE,Alu
chr1	220231338	T	C	0.00762	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	108678732	T	C	0.00396	SLC25A24	-	FALSE
chr14	70838268	T	C	0.00365	SYNJ2BP-COX16,SYNJ2BP	-	TRUE	AluSg	SINE,Alu
chr7	30616247	T	C	0.00887	LOC401320	-	FALSE	THE1B	SINE,Alu
chr3	119212009	G	A	0.00241	POGLUT1	+	FALSE
chr1	28826250	A	G	0.00489	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr7	36447345	A	T	0.00553	ANLN	+	FALSE
chr2	61416403	T	G	0.00350	USP34	-	FALSE	AluSc8	SINE,Alu
chr1	204095426	C	T	0.00481	SOX13	+	FALSE
chr17	61502458	T	A	0.00317	TANC2	+	FALSE
chr3	37366459	C	A	2.94197E-05	GOLGA4	+	FALSE
chr5	40852810	G	T	0.00276	CARD6	+	FALSE
chr3	15115270	G	T	0.00177	RBSN	-	FALSE
chr7	138732191	T	C	0.00746	ZC3HAV1	-	TRUE	MER5B	SINE,Alu
chr1	16945570	A	G	0.00131	CROCCP2	-	FALSE
chr3	156258283	T	C	0.00686	SSR3	-	TRUE	AluYk3	SINE,Alu
chr2	85776832	C	T	0.00514	GGCX	-	FALSE
chr1	16891340	T	A	0.00440	NBPF1	-	FALSE
chr1	117945049	G	A	0.00030	MAN1A2	+	FALSE
chr2	37327665	T	C	2.45403E-06		.	FALSE
chr1	206579936	A	G	0.00974	SRGAP2	+	FALSE
chrX	118672600	T	C	0.00080	CXorf56	-	TRUE	AluSx	SINE,Alu
chr4	152020779	G	T	0.00925	RPS3A	+	FALSE
chr1	10517456	T	C	0.00722		.	FALSE	AluSx1	SINE,Alu
chr2	164466039	A	C	0.00456	FIGN	-	FALSE
chr1	26144435	C	G	4.88757E-05	SEPN1	+	FALSE
chr1	138356	C	A	0.00199	LOC729737	-	FALSE
chr1	36534939	A	G	0.00936		.	FALSE	AluJo	SINE,Alu
chr4	1205668	C	A	0.00132	CTBP1-AS,CTBP1	+,-	FALSE	(A)n	SINE,Alu
chr1	46077218	A	G	0.00783	NASP	+	TRUE	AluSc8	SINE,Alu
chrX	123045407	A	G	0.00153	XIAP	+	TRUE	AluJo	SINE,Alu
chr3	124732407	T	G	0.00405	HEG1	-	FALSE
chr1	20826781	C	T	9.86003E-06	MUL1	-	FALSE
chr1	6283296	T	C	0.00225	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	36068295	T	C	0.00076	PSMB2	-	TRUE	AluSc	SINE,Alu
chr16	427820	C	T	0.00240	TMEM8A	-	FALSE
chr1	10517314	T	C	0.00368		.	FALSE	AluJr	SINE,Alu
chr1	113673737	A	G	0.00798		.	FALSE	AluSx1	SINE,Alu
chr1	6683581	A	C	0.00189	PHF13	+	FALSE
chr1	62673225	G	A	0.00039	L1TD1	+	FALSE	L1MEd	SINE,Alu
chr1	28661767	A	G	0.00144	MED18	+	TRUE	AluSg	SINE,Alu
chr2	23918891	C	T	1.03047E-06	KLHL29	+	FALSE
chr2	24223251	A	G	0.00489	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr2	37330391	T	C	0.00134		.	FALSE	AluSq2	SINE,Alu
chr6	42849746	A	G	0.00042	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	17320251	G	A	0.00367	ATP13A2	-	FALSE
chr1	184761162	T	C	0.00685	FAM129A	-	TRUE	AluJo	SINE,Alu
chr3	44790781	T	C	0.00158	KIAA1143	-	TRUE	AluY	SINE,Alu
chr17	65335477	T	C	2.02482E-05	PSMD12	-	TRUE	AluSx	SINE,Alu
chr3	37368755	T	A	9.43816E-08	GOLGA4	+	FALSE
chr1	87572817	C	T	0.00514	HS2ST1	+	FALSE
chr1	168212509	A	G	0.00765		.	FALSE
chr7	44047240	G	A	0.00588	POLR2J4,SPDYE1	+,-	FALSE
chr9	130209956	A	T	0.00221	RPL12	-	FALSE
chr1	28661656	A	G	0.00106	MED18	+	TRUE	AluSg	SINE,Alu
chr16	15219677	A	G	0.00136	PDXDC1,PKD1P6-NPIPP1	+,-	FALSE
chr1	10519946	T	C	0.00578		.	FALSE	AluJr	SINE,Alu
chr3	149683508	A	G	0.00397	PFN2	-	FALSE
chr17	263417	C	T	0.00675	LOC105371430,C17orf97	+,-	FALSE
chr1	85785554	C	T	0.00365	DDAH1	-	FALSE
chr1	16921146	T	C	0.00382	NBPF1	-	FALSE
chr2	132481508	C	G	0.00093	C2orf27A	+	FALSE
chr5	37290323	T	C	0.00029		.	FALSE	AluSz	SINE,Alu
chr1	45280426	A	G	0.00802		.	FALSE	AluSx	SINE,Alu
chr20	25427856	A	G	0.00094	GINS1	+	FALSE	AluSz	SINE,Alu
chr1	36068276	T	C	5.36857E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	144595935	G	A	0.00636	NBPF20	+	FALSE	AluJb	SINE,Alu
chr2	37333924	T	C	0.00298	EIF2AK2	-	FALSE	AluSz	SINE,Alu
chr3	172350135	A	T	9.93187E-07	NCEH1	-	FALSE
chr1	10519912	T	C	0.00942		.	FALSE	AluJr	SINE,Alu
chr1	54692334	T	C	0.00021	SSBP3	-	FALSE	(T)n	SINE,Alu
chr1	95660026	G	T	0.00129	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr2	206986233	T	C	0.00109		.	FALSE	AluSz	SINE,Alu
chr1	9163328	T	C	0.00150		.	FALSE	AluSp	SINE,Alu
chr19	11257673	T	C	0.00155	SPC24	-	TRUE	AluSp	SINE,Alu
chr14	24661020	C	T	0.00504	TM9SF1	-	FALSE	AluJb	SINE,Alu
chr3	40503562	G	A	0.00017	RPL14	+	FALSE
chr2	12858202	C	T	0.00873	TRIB2	+	FALSE
chr1	10520117	T	C	0.00078		.	FALSE	AluSx	SINE,Alu
chr2	204298783	A	C	0.00179	RAPH1	-	FALSE	(AT)n	SINE,Alu
chr1	118066459	A	G	0.00360	MAN1A2	+	FALSE
chr2	112252628	G	T	7.26456E-05	MIR4435-2HG	-	FALSE
chr1	713710	G	C	0.00448	LOC100288069	-	FALSE	FRAM	SINE,Alu
chr6	33384325	G	T	0.00456		.	FALSE
chr7	128169979	T	G	0.00569		.	FALSE
chr19	11256703	T	C	2.95254E-05	SPC24	-	TRUE	AluJr4	SINE,Alu
chr1	220232138	T	C	0.00011	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	28800380	C	A	0.00709	PHACTR4	+	FALSE
chr1	110170896	T	C	0.00140	AMPD2	+	FALSE
chr6	126661502	G	T	0.00873	CENPW	+	FALSE
chr6	52860743	T	G	1.89710E-05		.	FALSE	7SK	SINE,Alu
chr1	120572572	C	T	0.00084	NOTCH2	-	FALSE
chr1	33149414	A	G	5.81443E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	16524869	T	C	0.00164	ARHGEF19	-	FALSE
chr3	52237970	C	T	0.00017	ALAS1	+	FALSE
chr1	204526631	A	G	0.00536	MDM4	+	TRUE	AluSx	SINE,Alu
chr10	13320236	C	T	0.00011	PHYH	-	FALSE
chr1	6282587	T	C	0.00487	ICMT	-	TRUE
chr1	145688961	A	G	0.00324	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr2	198416726	T	A	0.00378	HSPE1-MOB4,MOB4	+	FALSE
chr1	33149376	A	G	0.00357	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	19543282	T	C	0.00228	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	145369589	T	C	0.00046	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	180943529	C	T	0.00297	STX6	-	FALSE
chr20	25428587	A	G	0.00018	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	78483452	C	T	0.00045	DNAJB4	+	FALSE	L1MB7	SINE,Alu
chr1	9331255	A	G	0.00992	H6PD	+	TRUE	AluSx	SINE,Alu
chr15	65442483	T	C	0.00523	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	37958451	C	G	0.00882	MEAF6	-	FALSE	MER5B	SINE,Alu
chr3	196670092	C	G	0.00393	NCBP2-AS2	+	FALSE
chr2	161130521	G	A	0.00454	RBMS1	-	FALSE
chr1	33148635	A	G	5.38540E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr17	49041866	T	C	0.00153	SPAG9	-	TRUE	AluSx	SINE,Alu
chr1	206566904	T	C	0.00084	SRGAP2	+	FALSE
chr1	10093371	C	T	0.00264	UBE4B	+	FALSE
chr9	124103030	G	A	0.00193	STOM	-	FALSE	AluSq2	SINE,Alu
chr4	129795661	A	T	0.00165	JADE1	+	FALSE
chr1	11979815	A	C	0.00042	KIAA2013	-	FALSE
chr1	109475572	A	G	0.00170	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	155282600	A	G	0.00019	FDPS	+	TRUE	AluSp	SINE,Alu
chr9	137330709	G	T	0.00965	RXRA	+	FALSE	(GCTG)n	SINE,Alu
chr1	52817376	T	C	0.00175	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr1	27874481	C	A	0.00046	AHDC1	-	FALSE
chr1	202992954	T	C	0.00042	TMEM183A	+	FALSE
chr1	33148287	A	G	0.00052	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	145512951	A	G	0.00180	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr8	48889823	C	A	0.00770	MCM4	+	FALSE	AluSx3	SINE,Alu
chr1	27107650	T	A	3.71504E-05	ARID1A	+	FALSE
chr1	144594373	C	G	0.00715	NBPF20	+	FALSE
chr6	3021352	T	C	0.00082	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr3	40578843	A	G	0.00749	ZNF621	+	TRUE	AluJr	SINE,Alu
chr2	86249930	T	C	6.06022E-05	LOC90784	-	TRUE	AluJr	SINE,Alu
chr4	110971055	A	T	0.00048	ELOVL6	-	FALSE
chr2	99812414	A	G	9.82924E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	40147856	T	C	0.00205	HPCAL4	-	TRUE
chr4	129924977	C	A	0.00760	SCLT1	-	FALSE
chr4	2951804	A	G	7.08227E-08	NOP14-AS1,NOP14	+,-	FALSE
chr2	227660628	T	G	0.00025	IRS1	-	FALSE
chr5	125961079	A	G	0.00258	PHAX	+	TRUE	AluSz	SINE,Alu
chr1	144828707	G	T	0.00504	NBPF20,NBPF9	+	FALSE
chr1	76253041	T	A	0.00646	RABGGTB	+	FALSE
chr5	81571875	A	T	0.00072	RPS23	-	FALSE
chr1	28824360	A	G	0.00971	PHACTR4	+	TRUE	AluSx3	SINE,Alu
chr1	31838550	T	A	0.00595	FABP3	-	FALSE
chr1	144931330	C	T	0.00194	NBPF20,PDE4DIP	+,-	FALSE
chr1	9161142	T	C	0.00160		.	FALSE	AluSx	SINE,Alu
chr3	196670094	G	C	5.91401E-08	NCBP2-AS2	+	FALSE
chr19	49468569	G	T	0.00266	FTL	+	FALSE
chr1	16893686	G	C	0.00296	NBPF1	-	FALSE
chr9	116022896	T	C	9.26547E-05	SLC31A1	+	FALSE
chr4	113197769	T	C	0.00101	TIFA	-	FALSE
chr7	920724	A	G	0.00328	GET4	+	TRUE	AluSx1	SINE,Alu
chr2	38522138	G	T	8.89010E-06	ATL2	-	FALSE
chr1	236716959	C	T	0.00727	HEATR1	-	FALSE
chr3	195963395	A	G	0.00028		.	FALSE
chr2	39009355	A	G	0.00079		.	FALSE	AluSx3	SINE,Alu
chr7	6501819	A	T	0.00037	KDELR2	-	FALSE
chr1	569492	T	C	0.00743		.	FALSE
chr2	9629305	A	T	0.00079	ADAM17	-	FALSE
chr1	39470977	C	A	0.00347	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr1	36322433	G	A	0.00663	AGO4	+	FALSE
chr6	170887693	G	C	0.00045	PDCD2	-	FALSE
chr6	3021465	T	C	0.00029	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr4	17803748	T	A	0.00859	DCAF16	-	FALSE
chr4	37953902	T	C	0.00109	TBC1D1	+	FALSE
chr1	36388197	C	T	0.00315	AGO1	+	FALSE
chr19	9672346	T	C	0.00222		.	FALSE	AluJr	SINE,Alu
chr1	205112911	T	C	0.00161	DSTYK	-	FALSE
chr16	10623544	T	C	2.29348E-06	EMP2	-	TRUE	AluSp	SINE,Alu
chr5	175816758	T	A	0.00528		.	FALSE
chr14	88933002	C	G	0.00459	PTPN21	-	FALSE
chr1	33149373	A	G	0.00264	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	117530217	C	T	0.00048	PTGFRN	+	FALSE
chr2	201735790	G	C	0.00671	PPIL3	-	FALSE
chr1	36770045	T	C	0.00488	THRAP3	+	FALSE
chr1	228520973	C	G	0.00875	OBSCN	+	FALSE
chr12	133333936	C	T	0.00726	ANKLE2	-	FALSE	MER58A	SINE,Alu
chr1	39908506	G	A	0.00079	MACF1	+	FALSE
chr1	214524556	T	C	0.00730	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	110173775	G	T	0.00015	AMPD2	+	FALSE
chr2	36704033	T	A	0.00012	CRIM1	+	FALSE
chr1	10521200	T	C	0.00013	DFFA	-	TRUE	AluY	SINE,Alu
chr1	114306369	A	T	0.00341	RSBN1	-	FALSE
chr3	66419942	A	G	0.00284	SLC25A26	+	FALSE
chr1	27992799	T	A	0.00017	IFI6	-	FALSE	FAM	SINE,Alu
chr1	234542410	C	A	0.00832	TARBP1	-	FALSE
chr1	146649884	T	A	0.00612	PDIA3P1	+	FALSE
chr1	46269545	G	A	0.00378	MAST2	+	FALSE
chr11	65404870	C	T	0.00160	PCNX3	+	FALSE
chr14	102547384	A	T	0.00403	HSP90AA1	-	FALSE
chr1	101444065	T	C	0.00927	SLC30A7	+	FALSE	MIR3	SINE,Alu
chr1	16889413	T	C	1.64789E-05	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr3	180694862	C	T	0.00638	FXR1	+	FALSE	(T)n	SINE,Alu
chr1	85785548	C	T	0.00220	DDAH1	-	FALSE
chr2	37330435	T	C	3.14905E-06		.	FALSE	AluSq2	SINE,Alu
chr5	125961554	A	G	0.00355	PHAX	+	TRUE	AluSz6	SINE,Alu
chr3	10005650	C	T	0.00698	EMC3	-	FALSE
chr1	184762498	T	C	0.00834	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	10519912	T	C	0.00750		.	FALSE	AluJr	SINE,Alu
chr12	990912	A	C	0.00244	WNK1	+	FALSE
chr6	150047423	T	C	0.00688	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	10520258	T	C	0.00396		.	FALSE	AluSx	SINE,Alu
chr1	86049390	A	G	0.00918	CYR61	+	FALSE
chr2	234386018	A	G	0.00299	USP40	-	FALSE
chr1	109535088	G	A	0.00353	WDR47	-	FALSE
chr5	96503523	C	T	0.00072	RIOK2	-	FALSE
chr2	63817855	C	G	0.00096	MDH1	+	FALSE
chr14	50361164	C	T	0.00103	ARF6	+	FALSE	(T)n	SINE,Alu
chr10	75008847	T	C	0.00349	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	86117191	T	C	0.00987	ZNHIT6	-	TRUE	AluSg	SINE,Alu
chr2	220416967	C	T	0.00300	OBSL1	-	FALSE
chr1	29446554	C	A	0.00682	EPB41,TMEM200B	+,-	FALSE
chr6	138412313	A	G	0.00092	PERP	-	FALSE
chr2	216903544	T	C	0.00929	PECR	-	TRUE	AluSx3	SINE,Alu
chr1	146650091	C	A	0.00361	PDIA3P1	+	FALSE
chr3	196771049	T	C	0.00010	DLG1	-	FALSE
chr1	150479901	C	T	0.00228	TARS2	+	FALSE	AluSc8	SINE,Alu
chr2	242615532	C	A	0.00603	DTYMK	-	FALSE
chr1	100490274	A	G	0.00234	SLC35A3	+	TRUE	AluSc5	SINE,Alu
chr1	20978304	T	A	0.00018	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr2	29135468	C	G	0.00262	WDR43	+	FALSE
chr3	17202334	A	C	0.00770	TBC1D5	-	FALSE
chr7	2274209	T	C	0.00578	MRM2	-	FALSE	AluJr	SINE,Alu
chr4	6675519	A	C	0.00064	LOC105374366	-	FALSE
chr1	145293566	G	A	0.00103	NBPF20,NBPF10	+	FALSE
chr1	25894467	A	T	0.00136	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr7	123390058	A	G	0.00102		.	FALSE
chr1	52520867	T	A	7.48778E-05	TXNDC12	-	FALSE
chr1	144828683	C	G	3.91144E-05	NBPF20,NBPF9	+	FALSE
chr3	160134195	G	A	0.00631	SMC4	+	FALSE
chr1	11084103	T	A	0.00146	TARDBP	+	FALSE
chr1	1252652	T	C	0.00219	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	144618144	A	G	0.00725	NBPF20,NBPF9	+	FALSE
chr1	19586501	A	G	5.42567E-10	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	6281866	A	C	0.00102	ICMT	-	FALSE
chr6	29910586	G	A	1.69263E-05		.	FALSE
chr1	54692674	A	G	0.00864	SSBP3	-	FALSE
chr1	152187945	C	T	9.69718E-05	HRNR	-	FALSE	(GCCAGA)n	SINE,Alu
chr1	154554940	G	C	0.00032	ADAR	-	FALSE
chr1	10517314	T	C	8.82505E-05		.	FALSE	AluJr	SINE,Alu
chr1	16933135	G	T	0.00937	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	35319119	A	T	0.00111	SMIM12	-	FALSE	L1ME4c	SINE,Alu
chr3	33185522	C	A	1.53330E-10	CRTAP	+	FALSE	L2a	SINE,Alu
chr1	32833539	T	C	1.95166E-05	BSDC1	-	TRUE
chr7	20178460	T	C	6.50978E-05	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	160967856	T	C	0.00027	F11R	-	TRUE	AluSp	SINE,Alu
chr15	83685469	T	C	0.00976	BTBD1	-	FALSE
chr17	8378932	A	G	0.00372	MYH10	-	FALSE
chr1	21100862	C	A	0.00012	HP1BP3	-	FALSE	(AC)n	SINE,Alu
chr1	19934839	A	G	0.00052	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr5	21883662	T	G	0.00108	CDH12	-	FALSE
chr1	16096934	C	T	0.00336	FBLIM1	+	FALSE
chr8	42876058	A	G	0.00029	HOOK3	+	TRUE	AluSq2	SINE,Alu
chr1	114443609	A	G	0.00035	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr2	217366868	A	G	0.00100		.	FALSE	AluSz6	SINE,Alu
chr4	1305799	C	T	0.00730	MAEA	+	FALSE
chr1	158067061	G	T	0.00093	KIRREL	+	FALSE
chr6	43747964	G	A	0.00542	VEGFA	+	FALSE
chr2	37329307	T	C	0.00201		.	FALSE	AluJr4	SINE,Alu
chr1	29508350	C	T	0.00859	SRSF4	-	FALSE	(GGC)n	SINE,Alu
chr1	148343689	A	G	0.00517	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	1650807	T	C	0.00104	CDK11B,CDK11A	-	FALSE
chr1	28835934	A	G	0.00596	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	19934893	C	A	0.00171	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	74665493	G	A	7.81871E-05	FPGT-TNNI3K,FPGT	+	FALSE
chr5	125961648	A	G	4.28370E-08	PHAX	+	FALSE	AluSz6	SINE,Alu
chr1	93827764	A	G	0.00056	DR1	+	FALSE
chr1	231377081	C	T	0.00895	GNPAT	+	FALSE
chr1	1344893	A	G	0.00186		.	FALSE	AluSg	SINE,Alu
chr2	100897573	G	A	0.00231	LONRF2	-	FALSE
chr1	113672634	A	G	0.00967		.	FALSE	AluJb	SINE,Alu
chr1	244572643	C	A	0.00560	ADSS	-	FALSE
chr2	47387307	G	T	0.00035	CALM2	-	FALSE
chr3	4403537	C	T	0.00055	SUMF1	-	FALSE	MIR3	SINE,Alu
chr3	160154971	T	C	0.00820	TRIM59	-	FALSE	AluJb	SINE,Alu
chr1	45975269	A	G	0.00098	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr13	107196415	C	T	0.00285	ARGLU1	-	FALSE	(TTG)n	SINE,Alu
chr2	173461888	A	G	0.00110	PDK1	+	TRUE	AluJr	SINE,Alu
chr2	38971639	A	T	0.00019	SRSF7	-	FALSE
chr1	193058937	C	T	0.00652	TROVE2	+	FALSE	AluSc	SINE,Alu
chr3	14986150	T	C	7.09959E-07	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr8	12884103	T	C	0.00033	KIAA1456	+	FALSE	MIR	SINE,Alu
chr3	196079305	T	C	0.00161		.	FALSE	AluSx	SINE,Alu
chr1	179843781	T	C	0.00888	TOR1AIP2	-	TRUE	AluJb	SINE,Alu
chr5	125961166	A	G	0.00732	PHAX	+	TRUE	AluSz	SINE,Alu
chr1	23636278	A	T	0.00121	HNRNPR	-	FALSE
chr3	120115286	T	G	0.00077	FSTL1	-	FALSE
chr1	6283434	T	C	0.00285	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	210885022	C	T	0.00325	RPE	+	FALSE
chr2	50147866	G	A	0.00130	NRXN1	-	FALSE	(GT)n	SINE,Alu
chr8	38829839	A	G	0.00184	PLEKHA2	+	TRUE	AluJr4	SINE,Alu
chr2	86252038	T	C	0.00453	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr4	83406544	C	T	0.00328	TMEM150C	-	FALSE
chr1	36067677	T	C	0.00522	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	201939479	T	A	0.00645	TIMM17A	+	FALSE
chr1	10042911	A	G	0.00043	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	179043553	G	A	0.00238	FAM20B	+	FALSE
chr2	8996323	G	A	0.00159	MBOAT2	-	FALSE
chr3	40578831	A	G	0.00956	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	145282600	A	C	0.00391	NBPF20,NOTCH2NL	+	FALSE	MER126	SINE,Alu
chr2	206980072	G	A	1.35396E-05		.	FALSE	MLT1A1	SINE,Alu
chr3	58292297	T	C	0.00950	RPP14	+	FALSE
chr1	144053662	T	G	0.00173		.	FALSE
chr2	70316299	C	A	0.00650	PCBP1	+	FALSE
chr1	6651728	C	T	0.00118	KLHL21	-	FALSE
chr2	37327589	T	C	0.00253		.	FALSE
chr1	3730332	T	C	0.00025	CEP104	-	TRUE	AluSx3	SINE,Alu
chr6	13788222	T	C	0.00490	MCUR1	-	TRUE	AluSx	SINE,Alu
chr2	32533218	A	G	0.00106		.	FALSE	AluY	SINE,Alu
chr17	65335430	T	C	0.00019	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	186641127	A	T	0.00546	PTGS2	-	FALSE
chr10	72187740	C	A	0.00668	EIF4EBP2	+	FALSE
chr1	16894497	C	T	0.00454	NBPF1	-	FALSE
chr1	155161736	G	A	0.00088	MUC1	-	FALSE
chr9	124095000	T	G	0.00764	GSN	+	FALSE	(TG)n	SINE,Alu
chr1	93827995	C	T	0.00714	DR1	+	FALSE
chr1	144930940	T	C	0.00181	NBPF20,PDE4DIP	+,-	FALSE
chr1	569803	G	A	0.00166		.	FALSE
chr2	3592674	C	A	0.00011	RNASEH1	-	FALSE
chr3	69104669	C	T	0.00113	UBA3	-	FALSE
chr1	46806550	C	T	0.00105	NSUN4	+	FALSE
chr1	24175288	C	G	0.00646	FUCA1	-	FALSE
chr2	37431639	T	C	0.00160	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr3	15112501	T	C	2.98131E-05	RBSN	-	TRUE	AluSq2	SINE,Alu
chr1	53291420	A	G	6.80791E-05	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr2	128063523	G	C	0.00174	MAP3K2	-	FALSE
chr7	91630345	G	A	0.00473	AKAP9	+	FALSE
chr2	37331077	T	C	0.00937		.	FALSE	AluSx1	SINE,Alu
chr1	207943188	A	G	0.00263	CD46	+	TRUE	AluSx1	SINE,Alu
chr3	66430375	T	A	0.00091	LRIG1	-	FALSE
chr2	73957124	A	G	2.00679E-05	TPRKB	-	FALSE
chrX	73421652	T	C	0.00436	FTX	-	TRUE	L1MB7	SINE,Alu
chr8	26435508	C	T	0.00106	DPYSL2	+	FALSE	(TC)n	SINE,Alu
chr1	931807	G	A	0.00578		.	FALSE
chr2	55459824	C	T	0.00763	RPS27A	+	FALSE
chr3	195411239	A	C	5.03065E-05	SDHAP2	+	FALSE
chr2	72968440	T	A	0.00138	EXOC6B	-	FALSE
chr1	144881463	C	T	0.00147	NBPF20,PDE4DIP	+,-	FALSE
chr1	120695049	G	A	0.00129		.	FALSE
chr3	176739159	A	C	0.00304	TBL1XR1	-	FALSE
chr1	204521280	A	G	0.00519	MDM4	+	TRUE	AluSp	SINE,Alu
chr14	24661017	G	T	0.00771	TM9SF1	-	FALSE
chrX	152916235	G	A	0.00015	DUSP9	+	FALSE
chr4	57796758	T	A	6.82460E-05	REST	+	FALSE
chr1	45975574	A	G	0.00050	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr15	42707317	A	T	8.30558E-05	ZNF106	-	FALSE
chr3	49051841	C	A	0.00132	WDR6	+	FALSE
chr5	52397314	C	T	0.00249	MOCS2	-	FALSE
chr15	31231255	A	G	0.00027	FAN1,MTMR10	+,-	FALSE
chr1	67881005	C	T	0.00776	SERBP1	-	FALSE
chr1	36316571	A	C	0.00893	AGO4	+	FALSE
chr1	204526611	A	G	0.00402	MDM4	+	TRUE	AluSx	SINE,Alu
chr2	100019496	A	G	0.00789	REV1	-	FALSE
chr1	142619386	G	A	0.00637		.	FALSE
chr1	33765752	G	A	0.00963	ZNF362	+	FALSE
chr5	130537666	A	G	0.00329	LYRM7	+	TRUE	AluJb	SINE,Alu
chr7	6064007	T	A	0.00551	EIF2AK1	-	FALSE
chr1	200375835	G	T	0.00063	ZNF281	-	FALSE	(T)n	SINE,Alu
chr2	224622277	T	C	0.00138	AP1S3	-	TRUE	AluSx1	SINE,Alu
chr1	63881552	C	T	0.00293	ALG6	+	FALSE
chr1	10517672	T	C	0.00090		.	FALSE	AluSx1	SINE,Alu
chr1	23636277	A	T	0.00632	HNRNPR	-	FALSE
chr14	74388908	T	C	0.00835	ZNF410	+	FALSE
chr3	129286413	G	C	2.51503E-06	PLXND1	-	FALSE
chr19	51172526	G	C	0.00276	SHANK1	-	FALSE
chr1	145441843	G	A	0.00744	NBPF20,NBPF10,TXNIP	+	FALSE
chr11	65179818	C	T	0.00799	FRMD8	+	FALSE
chr1	109865630	C	T	0.00647	SORT1	-	FALSE
chr3	176739404	A	G	7.21134E-06	TBL1XR1	-	FALSE
chr5	151041884	T	A	0.00101	SPARC	-	FALSE
chr3	66430374	A	T	0.00275	LRIG1	-	FALSE
chr19	11256626	T	C	1.61091E-07	SPC24	-	TRUE	AluJr4	SINE,Alu
chr1	53288862	A	G	0.00570	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	45120664	C	T	0.00437	TMEM53	-	FALSE
chr2	86252043	T	C	0.00909	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	206579936	A	G	0.00747	SRGAP2	+	FALSE
chr16	10624957	T	C	0.00034	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	19232211	G	A	0.00552	IFFO2	-	FALSE	(GT)n	SINE,Alu
chr1	6282237	T	C	0.00771	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	6259025	C	T	0.00700	RPL22	-	FALSE
chr1	320211	A	G	6.69717E-05		.	FALSE	AluJo	SINE,Alu
chr2	206983115	T	C	0.00992		.	FALSE	AluJb	SINE,Alu
chr9	9442082	T	G	0.00052	PTPRD	-	FALSE	7SLRNA	SINE,Alu
chr2	32534897	A	G	0.00111		.	FALSE	AluSx1	SINE,Alu
chr2	74690039	G	A	0.00412	MOGS	-	FALSE
chr5	139931633	C	A	0.00014	SRA1	-	FALSE
chr1	19953120	G	A	0.00027	MINOS1,MINOS1-NBL1	+	FALSE
chr12	26809316	G	A	0.00150	ITPR2	-	FALSE
chr1	165877671	T	C	0.00376	UCK2	+	FALSE	(T)n	SINE,Alu
chr1	36602176	G	T	0.00017	TRAPPC3	-	FALSE
chr17	4928967	T	G	0.00921	KIF1C	+	FALSE	AluY	SINE,Alu
chr1	20826781	C	T	0.00296	MUL1	-	FALSE
chr1	40539212	C	A	0.00380	PPT1	-	FALSE
chr1	6583474	T	C	0.00438	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	160966353	T	C	0.00011	F11R	-	TRUE	AluSg	SINE,Alu
chr4	185549875	A	T	0.00616	CASP3	-	FALSE
chr2	47604176	C	T	0.00328	EPCAM	+	FALSE
chr19	50410818	G	C	0.00722	IL4I1,NUP62	-	FALSE	AluSz	SINE,Alu
chr1	10517313	T	C	0.00742		.	FALSE	AluJr	SINE,Alu
chr1	28662186	A	G	0.00774	MED18	+	TRUE	AluSq2	SINE,Alu
chr12	44181367	G	A	0.00608	IRAK4	+	FALSE	MLT1E1A	SINE,Alu
chr4	109551180	C	A	0.00369	RPL34	+	FALSE
chr2	206987136	T	C	0.00189		.	FALSE	AluSx	SINE,Alu
chr2	152334323	A	G	0.00504		.	FALSE	AluSq	SINE,Alu
chr3	185826764	C	T	0.00364	ETV5	-	FALSE
chr7	66038472	G	A	0.00964	GS1-124K5.11	-	FALSE
chr1	6161107	A	T	0.00218	KCNAB2	+	FALSE
chr1	1419700	A	G	0.00671	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr12	27953267	T	G	0.00233	KLHL42	+	FALSE
chr11	75526481	C	A	0.00995	UVRAG	+	FALSE
chr5	85916592	G	A	0.00018		.	FALSE
chr1	116234083	T	A	0.00477	VANGL1	+	FALSE
chr1	36067752	T	C	5.48772E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	8045340	C	A	0.00217	PARK7	+	FALSE
chr1	145689537	A	G	0.00341	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	53291425	A	G	0.00507	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	144598726	A	C	0.00325	NBPF20	+	FALSE
chr2	128060859	T	A	0.00016	MAP3K2	-	FALSE
chr9	34088028	T	C	0.00854	DCAF12	-	FALSE
chr5	150827307	G	T	0.00708	SLC36A1	+	FALSE
chr2	197021372	T	A	0.00285	STK17B	-	FALSE
chr4	113108680	A	G	0.00109	C4orf32	+	FALSE
chr1	146650542	A	G	0.00017	PDIA3P1	+	FALSE
chr3	49396588	T	C	0.00533	RHOA	-	FALSE

RBP	UTP3
Knock-Method	shRNA
RBP Family	Sas10_Utp3
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR910ECL
Platform	HiSeq
Pubmed ID	32252787

UTP3 - Target Gene Network