RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr11	65764473	C	G	0.00403	EIF1AD	-	FALSE	AluSz6	SINE,Alu
chr1	169811639	G	C	0.00134	C1orf112	+	FALSE
chr1	214529320	T	G	0.00365	PTPN14	-	FALSE	AluJb	SINE,Alu
chr1	91990445	A	G	0.00784	CDC7	+	FALSE	LFSINE_Vert	SINE,Alu
chr1	1251841	T	C	0.00222	CPSF3L	-	TRUE	AluSq2	SINE,Alu
chr1	78603279	A	G	0.00089	GIPC2	+	FALSE
chr1	85742157	G	C	0.00514	BCL10,LOC646626	+,-	FALSE
chr1	45976268	G	A	0.00168	MMACHC	+	FALSE
chr19	39433138	G	A	0.00276	FBXO17	-	FALSE	AluJb	SINE,Alu
chr8	146035211	T	C	0.00116	ZNF517	+	FALSE	AluSx1	SINE,Alu
chr1	160967857	T	C	0.00032	F11R	-	TRUE	AluSp	SINE,Alu
chr17	65334886	T	C	8.05380E-09	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	10043053	A	G	0.00042	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr11	63724398	T	C	0.00664	NAA40	+	FALSE	AluSx	SINE,Alu
chr10	104417853	T	A	0.00393	TRIM8	+	FALSE	(AAT)n	SINE,Alu
chr11	28134974	C	A	0.00479	METTL15	+	FALSE
chr19	2917287	C	A	0.00243	ZNF57	+	FALSE
chr2	178086786	A	G	0.00305	HNRNPA3	+	FALSE
chr12	69237056	A	G	0.00372	MDM2	+	TRUE
chr4	17804847	T	C	0.00306	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	179326908	A	G	0.00037	SOAT1	+	TRUE	AluJo	SINE,Alu
chr4	47593283	G	C	0.00110	ATP10D	+	FALSE
chr1	94702991	G	C	0.00397	ARHGAP29	-	FALSE
chr1	120572572	C	T	0.00497	NOTCH2	-	FALSE
chr4	110635488	G	T	8.00508E-05	PLA2G12A	-	FALSE
chr4	57326131	A	G	0.00164	PAICS	+	TRUE	AluJr	SINE,Alu
chr12	56215103	A	T	0.00353	DNAJC14	-	FALSE
chr1	1417649	T	G	0.00274	ATAD3B	+	FALSE
chr14	50361170	C	T	0.00096	ARF6	+	FALSE	(T)n	SINE,Alu
chr1	17199309	G	A	0.00398	LOC440570	+	FALSE
chr1	24865333	A	G	0.00087		.	FALSE	FLAM_A	SINE,Alu
chr1	44447006	T	C	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr4	57801196	G	A	0.00485	REST	+	FALSE
chr2	77745788	T	C	0.00000	LRRTM4	-	FALSE
chr12	52631385	G	C	0.00777	KRT7	+	FALSE
chr19	14203874	A	C	0.00870	PRKACA	-	FALSE	(A)n	SINE,Alu
chrX	77083897	T	C	0.00184	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	1593060	T	C	5.25946E-05	CDK11B,SLC35E2B	-	FALSE
chr5	149363218	A	G	0.00233	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr1	246714587	G	A	0.00150	TFB2M	-	FALSE
chr1	67874859	T	C	0.00027	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	10517672	T	C	0.00070		.	FALSE	AluSx1	SINE,Alu
chr17	65335316	T	C	0.00296	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	10041432	A	G	0.00132	NMNAT1	+	TRUE	AluYj4	SINE,Alu
chr1	206579936	A	G	0.00974	SRGAP2	+	FALSE
chr4	140394600	G	A	0.00950	RAB33B	+	FALSE
chr1	46828700	A	G	0.00805	NSUN4	+	FALSE
chr15	51294995	G	A	0.00268	AP4E1	+	FALSE
chr12	98943018	A	G	0.00283	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	36067858	G	A	0.00293	PSMB2	-	FALSE	AluSz	SINE,Alu
chr1	109465171	T	A	0.00989	GPSM2	+	FALSE
chr1	21544447	G	A	0.00115	ECE1	-	FALSE
chr1	16890421	G	A	0.00024	NBPF1	-	FALSE
chr7	65992665	T	C	2.17687E-05		.	FALSE	AluJr	SINE,Alu
chr1	45975345	A	G	9.37661E-05	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	53289860	A	G	0.00119	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	1593023	G	C	2.84325E-05	CDK11B,SLC35E2B	-	FALSE
chr17	3561396	C	T	0.00322	CTNS	+	FALSE
chr5	109202858	G	A	0.00054	MAN2A1	+	FALSE	(A)n	SINE,Alu
chr8	42876058	A	G	0.00029	HOOK3	+	TRUE	AluSq2	SINE,Alu
chr10	79570873	G	T	0.00292	DLG5	-	FALSE
chr3	45960558	C	T	6.37727E-08	FYCO1	-	FALSE
chr3	44869002	G	T	0.00012	KIF15	+	FALSE
chr1	6948076	C	T	0.00221	CAMTA1	+	FALSE	L2a	SINE,Alu
chr2	10923581	C	T	0.00593	ATP6V1C2,PDIA6	+,-	FALSE
chr1	40219280	T	C	8.82951E-05	PPIE	+	FALSE
chr1	153599390	T	C	0.00135	S100A13	-	FALSE
chr1	25894467	A	T	0.00136	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	6583036	T	C	0.00296	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	28864731	A	G	0.00477	RCC1	+	FALSE
chr4	42089177	G	A	0.00447	SLC30A9	+	FALSE
chr2	85773061	A	G	0.00052	GGCX	-	FALSE
chr6	32148031	A	G	1.10299E-06		.	FALSE
chrX	123045342	A	G	0.00381	XIAP	+	FALSE	(ATAA)n	SINE,Alu
chr1	6659505	G	A	0.00405	KLHL21	-	FALSE
chr12	133297956	A	G	4.23080E-06	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	31732601	A	T	0.00479	SNRNP40	-	FALSE
chr2	227597697	G	T	0.00890	IRS1	-	FALSE
chr1	39470978	T	A	0.00378	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr1	27202835	T	C	0.00094		.	FALSE	AluSq2	SINE,Alu
chr1	33149376	A	G	0.00284	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	236721608	C	T	0.00286	HEATR1	-	FALSE
chr1	25717365	C	G	0.00229	RHCE	-	FALSE
chr1	179829401	T	C	0.00118	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	8412989	A	G	0.00225	RERE	-	FALSE
chr11	9602076	T	C	7.58058E-05	WEE1	+	FALSE	AluSg	SINE,Alu
chr2	37328075	T	C	0.00335		.	FALSE
chr2	61278030	A	G	0.00218	PEX13	+	TRUE	AluY	SINE,Alu
chr2	217366534	A	G	0.00733		.	FALSE	AluSz	SINE,Alu
chr2	174090636	T	A	0.00043	ZAK,MLK7-AS1	+,-	FALSE
chr14	53242639	T	C	1.43651E-05	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr17	1684352	T	C	0.00793	SMYD4	-	TRUE	AluSx1	SINE,Alu
chr3	156258283	T	C	0.00071	SSR3	-	TRUE	AluYk3	SINE,Alu
chr6	143661166	A	C	0.00536	AIG1	+	FALSE
chr1	6651456	A	G	0.00614	KLHL21	-	FALSE
chr1	205738302	G	A	0.00247	RAB29	-	FALSE
chr1	9163290	T	C	0.00016		.	FALSE	AluSp	SINE,Alu
chr3	194790434	C	G	0.00705	XXYLT1	-	FALSE
chr3	52581295	G	A	1.21436E-06	PBRM1	-	FALSE
chr1	1252221	T	C	0.00728	CPSF3L	-	TRUE	AluSx	SINE,Alu
chr1	109465167	T	A	0.00233	GPSM2	+	FALSE
chr4	2940347	T	C	0.00113	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr5	79279309	T	G	0.00167	MTX3	-	FALSE
chr2	136541072	T	C	0.00496	UBXN4	+	FALSE
chr4	17803604	T	C	0.00206	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	144053567	C	T	0.00963		.	FALSE
chr3	42591956	G	A	0.00503	SEC22C	-	FALSE
chr5	175816759	T	A	0.00018		.	FALSE
chr2	183642652	G	A	0.00309	DNAJC10	+	FALSE
chr1	78414285	T	A	0.00179	FUBP1	-	FALSE
chr1	10518797	T	C	0.00510		.	FALSE	AluSx1	SINE,Alu
chr1	8045340	C	A	0.00285	PARK7	+	FALSE
chr1	145273431	A	G	7.55666E-05	NBPF20,NOTCH2NL	+	FALSE
chr3	14986111	T	C	0.00999	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr19	1981317	T	A	0.00539	CSNK1G2	+	FALSE
chr2	128601426	T	C	0.00034		.	FALSE	AluJr	SINE,Alu
chr1	145689717	A	G	3.41980E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr1	26802401	T	G	4.43852E-05	HMGN2	+	FALSE
chr1	9645101	C	T	0.00726		.	FALSE	(ATATTC)n	SINE,Alu
chrX	24095325	A	G	7.48023E-10	EIF2S3	+	TRUE	AluSx	SINE,Alu
chr2	29170756	A	T	0.00573	WDR43	+	FALSE
chr1	26606589	C	G	0.00420	SH3BGRL3	+	FALSE
chr1	19543253	T	C	0.00202	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	16910172	G	A	0.00023	NBPF1	-	FALSE
chr1	28826190	A	G	0.00233	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr2	132275343	G	T	0.00334	LOC150776	+	FALSE
chr6	35259646	G	C	0.00808	ZNF76	+	FALSE
chr6	42856131	A	G	0.00062	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr3	23959343	A	T	0.00116	RPL15	+	FALSE
chr4	107246251	G	T	3.16074E-09	AIMP1	+	FALSE
chr2	152314385	G	A	0.00040	RIF1	+	FALSE
chr1	144918957	T	A	0.00484	NBPF20,PDE4DIP	+,-	FALSE
chr1	144828784	A	G	0.00053	NBPF20,NBPF9	+	FALSE
chr5	52397314	C	T	0.00249	MOCS2	-	FALSE
chr1	244871041	T	A	0.00590	DESI2	+	FALSE
chr8	30535975	T	C	5.05710E-05	GSR	-	TRUE	AluJr	SINE,Alu
chr17	28963296	A	G	0.00572	LOC107133515	+	TRUE	AluJr4	SINE,Alu
chr7	129472333	C	T	0.00670	UBE2H	-	FALSE	(CA)n	SINE,Alu
chr1	18808465	T	A	0.00957	KLHDC7A	+	FALSE
chr1	149582019	A	G	0.00082	LINC00623,LINC00869,LOC103091866	+	FALSE
chr5	174956487	T	C	0.00457	SFXN1	+	FALSE
chr1	113455427	T	A	0.00814	SLC16A1	-	FALSE
chr3	30735330	G	T	0.00401	TGFBR2	+	FALSE
chr1	186321189	A	G	0.00010	TPR	-	FALSE
chr1	75171751	T	C	0.00100	CRYZ	-	FALSE
chr1	145375862	T	C	0.00072	NBPF20,NBPF10	+	FALSE
chr16	10624926	T	C	0.00029	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	145512014	A	G	0.00023	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	6282426	T	C	0.00043	ICMT	-	TRUE	AluSz	SINE,Alu
chr2	7182946	T	C	0.00748	RNF144A	+	FALSE
chr1	20976032	T	C	9.95086E-05	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	150937960	G	C	0.00014	CERS2	-	FALSE	G-rich	SINE,Alu
chr4	2940371	T	C	0.00150	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	6582470	T	C	0.00370	NOL9	-	TRUE	AluSx1	SINE,Alu
chr1	28261662	A	G	0.00872	SMPDL3B	+	FALSE
chr16	15198598	C	T	0.00494	PDXDC1,PKD1P6-NPIPP1,LOC100505915	+,-	FALSE
chr1	19934758	C	G	1.75422E-05	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr7	79848334	G	T	0.00158	GNAI1	+	FALSE
chr1	9160982	T	C	0.00304		.	FALSE	AluJb	SINE,Alu
chr1	28662254	A	G	0.00052	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	53290298	A	G	0.00063	ZYG11B	+	TRUE	AluSg4	SINE,Alu
chr1	113212976	C	T	0.00904	CAPZA1	+	FALSE
chr6	126661502	G	T	0.00873	CENPW	+	FALSE
chr7	924602	A	G	0.00195	GET4	+	TRUE	AluJb	SINE,Alu
chr1	1252441	T	C	0.00602	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr7	98015394	G	C	0.00118	BAIAP2L1	-	FALSE
chr1	19542679	T	C	0.00575	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr1	16918734	G	C	0.00083	NBPF1	-	FALSE
chr1	1595034	T	C	2.36116E-07	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	93308168	T	A	0.00314	FAM69A	-	FALSE
chr2	207146629	A	G	0.00434	ZDBF2	+	FALSE
chr2	85772404	C	A	0.00015	GGCX	-	FALSE
chr13	21547676	T	C	0.00403	LATS2	-	FALSE
chr2	217366971	A	G	0.00616		.	FALSE	AluSz6	SINE,Alu
chr1	168220529	A	G	0.00161		.	FALSE	AluSz6	SINE,Alu
chr1	53288897	A	G	0.00160	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr3	192515557	G	A	0.00130	MB21D2	-	FALSE
chr2	113962806	A	G	0.00309		.	FALSE	AluSz	SINE,Alu
chr2	113334241	A	G	0.00388	POLR1B	+	TRUE
chr7	131241049	G	A	0.00145	PODXL	-	FALSE	(GGCGAC)n	SINE,Alu
chr2	85132779	T	G	1.13350E-06	TMSB10	+	FALSE
chr12	56510696	A	T	0.00767	RPL41	+	FALSE
chr1	19542311	T	C	0.00682	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	20826786	T	A	0.00030	MUL1	-	FALSE
chr1	86047210	C	T	0.00201	CYR61	+	FALSE
chr3	179506482	A	G	0.00017	USP13	+	FALSE	MER33	SINE,Alu
chr1	19586519	A	G	0.00310	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	47840953	A	G	0.00404	CMPK1	+	FALSE
chr3	133307637	G	T	0.00092	CDV3	+	FALSE
chr2	38971644	T	G	0.00239	SRSF7	-	FALSE
chr1	145322843	C	T	0.00428	NBPF20,NBPF10	+	FALSE
chr8	1730500	A	G	3.50527E-05	CLN8	+	TRUE	AluSx1	SINE,Alu
chr1	26582091	G	A	0.00172	CEP85	+	FALSE
chr1	149783886	C	T	0.00526	HIST2H2BF	-	FALSE
chr1	6282224	T	C	0.00062	ICMT	-	TRUE	AluSz	SINE,Alu
chr16	23536684	T	C	0.00012	EARS2	-	FALSE
chr1	38423183	C	T	0.00210	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	10520692	T	C	0.00973	DFFA	-	TRUE	AluSc8	SINE,Alu
chr2	201842434	T	C	1.94652E-05	FAM126B	-	TRUE	AluJb	SINE,Alu
chr9	132268442	A	G	0.00642	LINC00963	+	TRUE	AluJb	SINE,Alu
chr22	39415796	A	T	0.00084		.	FALSE	MER49	SINE,Alu
chr3	14985983	A	T	6.81677E-14	FGD5-AS1	-	FALSE
chr15	90627429	T	C	0.00013	IDH2	-	FALSE
chr4	129924977	C	A	0.00760	SCLT1	-	FALSE
chr8	128944721	G	T	0.00074	PVT1	+	FALSE
chr1	36067817	T	C	0.00120	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	9416574	A	G	0.00144	SPSB1	+	FALSE
chr1	19633555	G	A	0.00219	AKR7A2	-	FALSE
chr1	1325721	C	T	0.00471	CCNL2	-	FALSE
chr1	244219905	G	T	0.00772	ZBTB18	+	FALSE
chr2	176791181	T	C	0.00063	LNPK	-	TRUE	MSTD	SINE,Alu
chr14	75202698	A	G	6.15110E-05	FCF1	+	TRUE	AluSc	SINE,Alu
chr12	12967264	C	G	0.00781	DDX47	+	FALSE
chr16	57505635	G	T	0.00974	POLR2C	+	FALSE
chr2	232574807	C	G	0.00134	PTMA	+	FALSE
chr1	95658358	T	C	0.00633	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr1	67896040	G	A	1.31286E-05	SERBP1	-	FALSE
chr1	900723	T	G	0.00051	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr8	57872143	C	T	0.00037	IMPAD1	-	FALSE
chr1	40214148	A	G	0.00426	PPIE	+	TRUE	AluSq2	SINE,Alu
chr8	144684474	T	C	0.00058		.	FALSE
chr1	143464946	T	C	0.00109		.	FALSE
chr3	75475670	A	C	0.00506	FAM86DP	-	FALSE
chr1	101444065	T	C	0.00927	SLC30A7	+	FALSE	MIR3	SINE,Alu
chr2	37331037	T	C	0.00036		.	FALSE	AluSx1	SINE,Alu
chr16	80636806	T	G	0.00926	CDYL2	-	FALSE
chr11	61732461	G	T	2.02182E-05	FTH1	-	FALSE
chr1	36322433	G	A	0.00663	AGO4	+	FALSE
chrX	3526615	G	T	0.00820	PRKX	-	FALSE
chr3	44790759	T	C	0.00744	KIAA1143	-	TRUE	AluY	SINE,Alu
chr2	37328075	T	C	0.00863		.	FALSE
chr9	131071533	T	C	0.00168	TRUB2	-	TRUE	FAM	SINE,Alu
chr1	36067677	T	C	1.65353E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	128949342	A	G	0.00397	UGGT1	+	TRUE	AluSg	SINE,Alu
chr2	24225006	A	G	0.00277		.	FALSE	AluSx	SINE,Alu
chr5	109204057	T	A	0.00614	MAN2A1	+	FALSE
chr4	52753346	A	G	0.00782	DCUN1D4	+	TRUE	AluSc	SINE,Alu
chr3	15483830	A	G	3.44106E-05	EAF1	+	FALSE
chr2	73339708	G	A	0.00991	RAB11FIP5	-	FALSE
chr1	145329094	G	C	0.00273	NBPF20,NBPF10	+	FALSE
chr1	109746825	A	G	0.00094	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr5	41919747	C	T	0.00814	C5orf51	+	FALSE	L2c	SINE,Alu
chr5	43575009	T	C	0.00498	NNT-AS1	-	TRUE	AluSq2	SINE,Alu
chr2	24223159	A	G	0.00717	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	9163334	T	C	0.00889		.	FALSE	AluSp	SINE,Alu
chr12	120898661	A	G	2.17580E-05	GATC	+	TRUE	AluY	SINE,Alu
chr1	118503786	A	G	0.00135	SPAG17	-	FALSE	AluSx3	SINE,Alu
chr1	203277245	G	A	0.00115	BTG2	+	FALSE
chr1	44447004	G	A	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr1	151374016	A	G	0.00822	PSMB4	+	FALSE
chr1	19586458	A	G	0.00029	MRTO4	+	TRUE	AluSz	SINE,Alu
chr7	44839297	A	T	0.00777	PPIA	+	FALSE
chr20	25428384	A	G	0.00195	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	237064432	C	G	0.00019	MTR	+	FALSE
chr2	171850175	G	T	0.00054	TLK1	-	FALSE
chr11	76733945	A	T	0.00931	ACER3	+	FALSE	A-rich	SINE,Alu
chr1	179989742	G	C	0.00019	CEP350	+	FALSE
chrX	77084007	T	C	0.00141	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	246829742	T	C	0.00037	CNST	+	FALSE	(TGTG)n	SINE,Alu
chr19	11256672	T	C	9.28647E-11	SPC24	-	TRUE	AluJr4	SINE,Alu
chr1	11083183	G	T	0.00342	TARDBP	+	FALSE
chr1	160967899	T	C	0.00011	F11R	-	TRUE	AluSp	SINE,Alu
chr3	197612430	A	G	0.00052		.	FALSE	AluSp	SINE,Alu
chr1	45975345	A	G	0.00614	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr6	111348022	A	T	2.41155E-06	RPF2	+	FALSE
chr4	39551179	T	C	0.00142	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr3	14175262	T	C	3.06250E-10	TMEM43	+	FALSE
chr1	9740896	C	T	0.00078	PIK3CD,PIK3CD-AS2	+,-	FALSE	MLT1F1	SINE,Alu
chr1	1251841	T	C	0.00915	CPSF3L	-	TRUE	AluSq2	SINE,Alu
chr5	74669972	C	T	0.00113	COL4A3BP	-	FALSE
chr1	207943385	A	G	0.00558	CD46	+	TRUE	AluSx1	SINE,Alu
chr10	75008845	T	C	4.48613E-05	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	94351064	A	T	0.00212	GCLM	-	FALSE
chr3	14986098	T	C	0.00996	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	144828765	A	T	0.00976	NBPF20,NBPF9	+	FALSE
chr1	145284175	G	C	0.00562	NBPF20,NOTCH2NL	+	FALSE
chr3	157161198	A	T	0.00486	VEPH1,PTX3	+,-	FALSE
chr19	46053369	T	C	0.00504	OPA3	-	TRUE	AluSx1	SINE,Alu
chr4	10443062	T	G	0.00303	ZNF518B	-	FALSE
chr3	42610374	A	G	0.00594	SEC22C	-	FALSE
chr1	33145959	T	G	0.00755	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chr7	66421684	T	G	0.00042	TMEM248	+	FALSE	AluJr	SINE,Alu
chr11	8707397	T	A	0.00046	RPL27A	+	FALSE
chr1	569991	T	G	0.00980		.	FALSE
chr1	1683565	G	A	0.00269	NADK	-	FALSE
chr1	44685732	T	C	8.08877E-10	DMAP1	+	FALSE
chr1	900721	T	C	0.00032	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr2	38975953	T	A	0.00432	SRSF7	-	FALSE
chr1	155403823	A	G	0.00850	ASH1L,POU5F1P4	+,-	FALSE
chr1	36299630	A	G	0.00828	AGO4	+	FALSE
chr1	10044366	A	G	0.00958	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr1	10519982	T	C	0.00572		.	FALSE	AluJr	SINE,Alu
chr2	24227417	A	G	0.00831		.	FALSE	AluSc	SINE,Alu
chr1	1252248	A	G	0.00938	CPSF3L	-	FALSE	AluSx	SINE,Alu
chr3	179115501	A	T	1.86203E-06	GNB4	-	FALSE
chr1	168218660	A	G	0.00296		.	FALSE	AluSz	SINE,Alu
chr2	37328097	T	C	0.00018		.	FALSE
chr2	11426734	T	C	4.76290E-06	ROCK2	-	FALSE
chr3	47628810	T	A	0.00934	SMARCC1	-	FALSE
chr6	150046601	T	C	0.00073	NUP43	-	TRUE	AluSq2	SINE,Alu
chr1	179042555	A	G	0.00922	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	19545145	A	T	0.00510	LOC101927895,EMC1	+,-	FALSE
chr1	28826128	A	G	0.00483	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr3	20025663	G	T	0.00612	RAB5A,PP2D1	+,-	FALSE
chrX	2824343	T	C	0.00108	ARSD	-	TRUE	AluJb	SINE,Alu
chr2	68402797	T	A	0.00656	PNO1	+	FALSE
chrX	73421652	T	C	0.00436	FTX	-	TRUE	L1MB7	SINE,Alu
chr12	133298121	A	G	1.85542E-11	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	28150601	A	T	0.00382	STX12	+	FALSE
chr1	9328242	A	G	0.00116	H6PD	+	TRUE	AluJr	SINE,Alu
chr12	9464178	G	A	0.00081	LOC642846	+	FALSE
chr2	24223291	A	G	0.00512	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr7	100031497	T	G	0.00119	MEPCE	+	FALSE
chr17	73886212	T	C	0.00724	TRIM65	-	TRUE	FRAM	SINE,Alu
chr1	145284883	A	G	0.00329	NBPF20,NOTCH2NL	+	FALSE	L2a	SINE,Alu
chr13	41635235	C	T	0.00400		.	FALSE
chr1	92975262	C	A	0.00238	EVI5	-	FALSE
chr1	220231959	T	C	0.00028	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	93603196	G	A	0.00627	MTF2	+	FALSE
chr20	43343908	G	A	9.03009E-05	KCNK15-AS1,WISP2	+,-	FALSE	(GC)n	SINE,Alu
chr1	28826118	A	G	0.00948	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr2	73460315	C	T	0.00315	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr3	88199298	T	C	0.00048	C3orf38	+	FALSE
chr1	31732677	G	A	0.00030	SNRNP40	-	FALSE	A-rich	SINE,Alu
chr1	36794266	A	G	0.00141		.	FALSE	AluJb	SINE,Alu
chr1	16889864	C	A	0.00598	NBPF1	-	FALSE
chr19	49232226	G	A	0.00887	RASIP1	-	FALSE
chr1	32661615	A	T	0.00454	TXLNA	+	FALSE
chr5	125961648	A	G	0.00031	PHAX	+	FALSE	AluSz6	SINE,Alu
chr1	168212509	A	G	0.00765		.	FALSE
chr22	18571475	A	G	0.00019	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	10518756	T	C	0.00323		.	FALSE	AluSx1	SINE,Alu
chr19	50370106	T	G	0.00359	PNKP	-	FALSE
chr1	38326700	T	C	5.61462E-05	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	3545194	C	G	0.00176	TPRG1L	+	FALSE
chr2	37331038	T	C	0.00261		.	FALSE	AluSx1	SINE,Alu
chr1	10517653	T	C	1.73226E-05		.	FALSE	AluSx1	SINE,Alu
chr1	205686520	A	G	0.00980	NUCKS1	-	FALSE
chr1	36642328	C	T	0.00971	MAP7D1	+	FALSE	GA-rich	SINE,Alu
chr4	165998226	T	C	0.00754	TMEM192	-	TRUE	AluSx	SINE,Alu
chr2	86252112	T	C	0.00233	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr7	21941393	A	T	0.00937	CDCA7L	-	FALSE
chr1	200375846	G	T	0.00040	ZNF281	-	FALSE	(T)n	SINE,Alu
chr3	196558949	A	G	6.63189E-10	PAK2	+	FALSE
chr2	232319524	T	A	0.00040	NCL	-	FALSE
chr1	32687472	G	A	0.00877	TMEM234,EIF3I	+,-	FALSE
chr1	16928622	C	A	0.00197	NBPF1	-	FALSE
chr4	2940265	T	C	0.00413	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	235272660	C	T	0.00111	TOMM20	-	FALSE	Tigger10	SINE,Alu
chr1	1597403	C	T	0.00912	CDK11B,SLC35E2B	-	FALSE
chr1	146374185	C	G	0.00376	NBPF20,NBPF10,NBPF25P,NBPF12	+	FALSE
chr1	35649803	A	C	0.00659	SFPQ	-	FALSE
chr2	55459824	C	T	0.00763	RPS27A	+	FALSE
chr3	10192784	A	G	1.73909E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	205583612	C	A	0.00311	ELK4	-	FALSE
chr9	115446668	T	C	1.81109E-05	INIP	-	TRUE	AluJr	SINE,Alu
chr15	63363388	G	T	0.00096	TPM1	+	FALSE
chr3	195635455	T	C	0.00158	TNK2	-	FALSE
chr1	35648712	G	A	0.00298	SFPQ	-	FALSE
chr3	14986461	T	C	3.09385E-06	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	16932144	A	C	7.50683E-06	NBPF1	-	FALSE
chr1	77759578	A	G	0.00031	AK5	+	FALSE
chr3	56654248	T	G	3.99921E-06	CCDC66,FAM208A	+,-	FALSE
chr1	19586458	A	G	0.00053	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	68167532	A	C	0.00916	GNG12	-	FALSE
chr1	227071525	C	T	0.00013	PSEN2	+	FALSE
chr4	17804279	G	A	0.00606	DCAF16	-	FALSE	(A)n	SINE,Alu
chr15	91044383	G	T	0.00440	IQGAP1	+	FALSE
chr1	36787880	C	T	0.00023	EVA1B	-	FALSE
chr1	179814457	A	C	0.00152	TOR1AIP2	-	FALSE
chr12	1611791	C	G	0.00971	LINC00942	+	FALSE
chr3	197611095	A	G	0.00694		.	FALSE	AluSx1	SINE,Alu
chr14	64152514	T	C	1.52259E-06	SGPP1	-	TRUE	(TA)n	SINE,Alu
chr2	46852033	A	G	0.00543	CRIPT	+	FALSE
chr10	102315864	T	A	0.00290		.	FALSE
chr1	28566404	T	G	0.00963		.	FALSE	AluSx1	SINE,Alu
chr1	9331255	A	G	0.00992	H6PD	+	TRUE	AluSx	SINE,Alu
chr11	44641025	G	A	0.00850	CD82	+	FALSE
chr1	10521200	T	C	0.00096	DFFA	-	TRUE	AluY	SINE,Alu
chr4	6644459	C	A	0.00109	MRFAP1	+	FALSE
chr1	1650801	T	C	1.21097E-05	CDK11B,CDK11A	-	FALSE
chr1	110049203	G	C	0.00530		.	FALSE
chr1	6704635	A	G	0.00978	DNAJC11	-	FALSE
chr7	6063467	G	A	0.00620	EIF2AK1	-	FALSE
chr1	16929327	C	T	0.00646	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	19543352	T	C	0.00715	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	38423182	G	C	0.00664	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	149913727	T	C	1.10479E-05	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr1	26608016	G	A	1.44245E-06		.	FALSE
chr17	65334867	T	C	1.03096E-06	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	92862764	A	G	0.00415		.	FALSE	AluJr	SINE,Alu
chr18	11852628	C	T	0.00048	GNAL,CHMP1B	+	FALSE
chr16	81745173	C	A	0.00179	CMIP	+	FALSE
chr1	79115905	T	C	0.00113	IFI44	+	FALSE
chr3	45721836	A	G	0.00714	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	28261661	G	A	0.00872	SMPDL3B	+	FALSE

RBP	GRSF1
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR674KDQ
Platform	HiSeq
Pubmed ID	32252787

GRSF1 - Target Gene Network