RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	16889502	T	C	0.00516	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	1650657	C	G	0.00379	CDK11B,CDK11A	-	FALSE
chr1	23636277	A	T	0.00188	HNRNPR	-	FALSE
chr5	36143392	C	T	0.00625	LMBRD2	-	FALSE
chr2	227597697	G	T	0.00890	IRS1	-	FALSE
chr1	118502771	A	G	0.00466	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr1	1595602	A	G	9.14189E-05	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr1	38326643	T	C	0.00458	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	16269737	C	T	0.00816	ZBTB17	-	FALSE
chr14	65400786	T	G	0.00077	CHURC1-FNTB,CHURC1	+	FALSE	AluSx	SINE,Alu
chr1	45452227	G	C	0.00279	EIF2B3	-	FALSE
chr1	36068370	T	C	4.62049E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	16912099	G	C	0.00450	NBPF1	-	FALSE
chr6	7610036	C	A	0.00545	SNRNP48	+	FALSE	L1ME1	SINE,Alu
chr19	58371837	A	G	0.00329	ZNF587	+	TRUE	AluSz	SINE,Alu
chr1	22419433	T	G	0.00156	CDC42	+	FALSE
chr5	56177845	A	T	0.00420	MAP3K1	+	FALSE
chr3	10285030	G	A	0.00384	IRAK2	+	FALSE
chr1	110300588	C	T	0.00232	EPS8L3	-	FALSE
chr2	9629305	A	T	0.00079	ADAM17	-	FALSE
chr1	1570919	C	T	0.00161	CDK11B	-	FALSE
chr1	19586360	T	C	0.00023	MRTO4	+	FALSE
chr1	145511983	A	G	0.00596	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr16	70695982	T	C	0.00926	MTSS1L	-	FALSE
chr1	70904800	G	T	0.00020	CTH	+	FALSE
chr1	10517306	T	C	0.00176		.	FALSE	AluJr	SINE,Alu
chr1	8412989	A	G	0.00190	RERE	-	FALSE
chr1	40537941	A	C	0.00216	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	180169330	C	T	0.00374	FLJ23867	+	FALSE	MIR	SINE,Alu
chr1	145500925	T	A	0.00997	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	214529740	T	C	0.00356	PTPN14	-	TRUE
chr1	6283264	T	C	0.00378	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	16112795	A	G	3.02097E-05	FBLIM1	+	FALSE
chr10	61548857	C	A	0.00046	CCDC6	-	FALSE
chr3	195412715	T	C	0.00837	SDHAP2	+	FALSE
chr2	242615532	C	A	0.00603	DTYMK	-	FALSE
chr1	19542456	T	C	0.00186	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	145511993	A	G	0.00088	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	9989022	A	G	0.00616	LZIC	-	FALSE	L1MB5	SINE,Alu
chr7	32908135	C	G	0.00076	KBTBD2	-	FALSE
chr2	206858904	C	T	0.00783	INO80D	-	FALSE
chr1	1345006	A	G	1.26297E-06		.	FALSE	AluSg	SINE,Alu
chr6	42856157	A	G	0.00081	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	16933110	T	C	0.00143	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	193054575	C	G	0.00029	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr1	6282420	T	C	0.00779	ICMT	-	TRUE	AluSz	SINE,Alu
chr6	31323203	A	G	2.54151E-09		.	FALSE
chr12	92537721	A	T	0.00057	BTG1	-	FALSE
chr2	70506338	C	T	0.00026	PCYOX1	+	FALSE
chr3	45721891	A	G	0.00163	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	33148210	A	G	0.00114	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	19542310	T	C	0.00581	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	36534086	A	G	0.00157		.	FALSE	FLAM_A	SINE,Alu
chr1	17998	C	T	0.00194	WASH7P	-	FALSE
chr3	150262004	A	T	0.00167	SERP1	-	FALSE
chr3	179306775	C	T	7.88487E-06	MRPL47	-	FALSE
chr1	228880021	C	T	4.50271E-05	RHOU	+	FALSE
chr1	6282401	T	C	0.00469	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	567191	C	T	0.00428		.	FALSE
chr10	49609751	A	G	0.00979	MAPK8	+	FALSE
chr3	45721990	A	G	0.00022	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr2	99812988	A	G	8.76694E-05	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	6314743	C	T	0.00615	GPR153	-	FALSE
chr1	179042590	A	G	0.00152	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	3730400	T	C	0.00457	CEP104	-	TRUE	AluSx3	SINE,Alu
chr4	7765042	C	T	0.00903	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	179042719	A	G	2.68049E-06	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	143189076	G	A	0.00048	LOC102723769	-	FALSE
chr17	40176809	A	T	0.00860	NKIRAS2	+	FALSE	AluSz	SINE,Alu
chr7	129472333	C	T	0.00670	UBE2H	-	FALSE	(CA)n	SINE,Alu
chr1	63881552	C	T	0.00293	ALG6	+	FALSE
chr2	8823941	G	A	0.00053	ID2	+	FALSE
chr1	36068294	T	C	0.00321	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	203741065	T	C	2.92684E-06		.	FALSE
chr1	231154935	C	T	0.00093	FAM89A	-	FALSE
chr1	45244414	T	A	0.00456		.	FALSE
chr5	176728458	G	T	0.00901	RAB24	-	FALSE
chr8	143744556	T	C	0.00586	JRK	-	TRUE	AluJr	SINE,Alu
chr3	39453160	G	A	0.00000	RPSA	+	FALSE
chr2	203743821	T	C	0.00880		.	FALSE	AluSx3	SINE,Alu
chr1	1656557	T	C	0.00061	SLC35E2	-	TRUE	AluSz	SINE,Alu
chr3	183209052	T	C	0.00041	KLHL6	-	TRUE	AluSq	SINE,Alu
chr1	9163334	T	C	0.00889		.	FALSE	AluSp	SINE,Alu
chr3	45960561	T	A	9.94810E-07	FYCO1	-	FALSE
chr1	27108245	T	C	0.00265	ARID1A	+	FALSE
chr1	181026558	G	A	0.00217	MR1	+	FALSE
chr5	6633042	C	T	0.00377	NSUN2	-	FALSE
chr3	9934605	T	C	3.00360E-07	JAGN1	+	FALSE
chr2	201774264	T	C	0.00099		.	FALSE	AluSz	SINE,Alu
chr1	46126142	G	C	0.00171	GPBP1L1	-	FALSE
chr1	28087457	G	T	0.00178	FAM76A	+	FALSE	(T)n	SINE,Alu
chr3	10168802	A	G	6.92223E-05	BRK1	+	FALSE
chr2	46414708	G	A	0.00173	PRKCE	+	FALSE
chr2	132278713	T	C	0.00317	LOC150776	+	FALSE
chr1	45110404	C	T	0.00230	RNF220	+	FALSE
chr7	152343700	T	C	0.00061	XRCC2	-	TRUE	AluSx3	SINE,Alu
chr1	100490067	A	G	0.00267	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr5	122165501	A	T	0.00051	SNX2	+	FALSE	(AC)n	SINE,Alu
chr2	206861649	T	A	0.00066	INO80D	-	FALSE
chr22	50745987	C	G	0.00683	PLXNB2	-	FALSE
chr5	32601672	A	T	0.00563	SUB1	+	FALSE
chr1	156713558	G	A	8.10199E-06	HDGF	-	FALSE
chr5	125961447	A	G	0.00025	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	19585772	G	A	2.66054E-05	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr2	114220055	T	C	9.23000E-05	CBWD2	+	FALSE
chr12	27953266	G	T	0.00198	KLHL42	+	FALSE
chr11	119533723	A	G	0.00169	NECTIN1	-	FALSE
chr1	17199303	G	A	0.00062	LOC440570	+	FALSE
chr1	16133978	T	C	0.00625	UQCRHL	-	FALSE
chr1	236702210	A	G	0.00153	LGALS8	+	FALSE
chr2	101886749	T	G	0.00534	CNOT11	+	FALSE
chr1	28920925	A	G	0.00294	RAB42	+	TRUE	AluSx	SINE,Alu
chr6	31324036	T	A	0.00378		.	FALSE
chr1	120162787	T	C	0.00925	ZNF697	-	FALSE
chr2	241825926	T	C	7.75373E-05	C2orf54	-	FALSE
chr2	178186556	G	A	0.00917	LOC100130691	-	FALSE
chr10	13320126	T	A	0.00830	PHYH	-	FALSE
chr1	10520683	T	C	0.00582	DFFA	-	TRUE	AluSc8	SINE,Alu
chr19	59095573	A	G	0.00169	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr2	113289701	T	G	0.00994	TTL	+	FALSE
chr17	4929863	A	G	0.00597	KIF1C	+	TRUE	AluJb	SINE,Alu
chr2	73339708	G	A	0.00991	RAB11FIP5	-	FALSE
chr7	17384395	A	G	1.20082E-06	AHR	+	TRUE	AluSx	SINE,Alu
chr8	12879062	T	C	0.00035	KIAA1456	+	FALSE
chr2	176791182	T	C	0.00603	LNPK	-	TRUE	MSTD	SINE,Alu
chr1	19542239	T	C	0.00038	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr6	74134781	T	C	0.00789		.	FALSE	AluSz	SINE,Alu
chr2	204162277	A	G	0.00097	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr1	22186113	T	G	0.00083	HSPG2	-	FALSE
chr2	131104524	G	A	0.00912	IMP4	+	FALSE	L1MA9	SINE,Alu
chr2	239973454	T	C	0.00091	HDAC4	-	FALSE
chr3	196315260	T	C	0.00102	FBXO45	+	FALSE
chr12	27848051	C	A	0.00245	PPFIBP1	+	FALSE
chr1	93603177	T	C	0.00364	MTF2	+	FALSE
chr11	94801633	A	T	0.00808	SRSF8	+	FALSE
chr1	327538	A	G	0.00010		.	FALSE
chr22	17129526	A	G	0.00485	TPTEP1	+	TRUE	AluSz	SINE,Alu
chr5	150647719	T	C	0.00112	GM2A	+	FALSE	AluSc	SINE,Alu
chr9	37503313	A	G	0.00584	POLR1E	+	TRUE	AluJb	SINE,Alu
chr1	38174987	T	C	0.00032	CDCA8	+	FALSE
chr1	67874731	T	C	0.00565	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	19586532	A	G	7.13982E-05	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	183105534	T	C	0.00125	LAMC1	+	FALSE
chr18	2804129	G	A	0.00157	SMCHD1	+	FALSE
chr2	10711446	T	C	0.00014	NOL10	-	FALSE	MSTA	SINE,Alu
chr1	16958833	T	A	0.00765		.	FALSE
chr1	33149495	A	G	0.00675	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr16	58054472	T	C	0.00530	USB1	+	FALSE
chr4	113108680	A	G	0.00109	C4orf32	+	FALSE
chr1	145376020	G	A	0.00067	NBPF20,NBPF10	+	FALSE
chr1	40539211	A	T	0.00105	PPT1	-	FALSE
chr3	126755134	C	T	0.00920	PLXNA1	+	FALSE
chr8	143763622	C	T	0.00470	PSCA	+	FALSE
chr1	16892276	T	C	0.00236	NBPF1	-	FALSE
chr19	53999034	A	G	0.00282		.	FALSE	AluSq2	SINE,Alu
chr1	63009329	T	G	0.00155	DOCK7	-	FALSE
chr19	53914395	A	G	0.00227	ZNF765	+	TRUE	AluSx	SINE,Alu
chr2	23865260	T	C	0.00262	KLHL29	+	FALSE
chr1	16384843	G	C	0.00049	FAM131C	-	FALSE
chr7	127947979	T	C	0.00257		.	FALSE	AluJr	SINE,Alu
chr20	25428384	A	G	0.00195	GINS1	+	TRUE	AluSz	SINE,Alu
chr2	37329331	T	C	0.00343		.	FALSE	AluJr4	SINE,Alu
chr1	220323448	C	T	0.00985	RAB3GAP2	-	FALSE
chr1	32373831	T	G	0.00252	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr3	141668922	T	C	0.00937	TFDP2	-	TRUE	AluSz	SINE,Alu
chr2	152334389	A	G	0.00308		.	FALSE	AluSq	SINE,Alu
chr1	145116149	T	A	0.00585	NBPF20,SEC22B	+	FALSE
chr3	42592874	T	C	9.28376E-05	SEC22C	-	FALSE	AluJr	SINE,Alu
chr1	204525667	A	G	3.94227E-05	MDM4	+	TRUE	AluSz	SINE,Alu
chr6	42048297	A	G	0.00307	TAF8	+	TRUE	AluSq2	SINE,Alu
chr5	37291446	T	C	6.87884E-05		.	FALSE	AluSx3	SINE,Alu
chr1	36067886	T	C	0.00150	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	45976262	A	C	0.00010	MMACHC	+	FALSE
chr5	93018883	A	T	0.00393	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr1	29519665	T	C	0.00680	MECR	-	TRUE	AluJb	SINE,Alu
chr6	74133913	T	C	0.00439		.	FALSE	AluY	SINE,Alu
chr4	185309396	G	A	0.00199	IRF2	-	FALSE	(GGGAT)n	SINE,Alu
chr1	19543465	T	C	0.00709	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr5	60050122	A	T	0.00272	ELOVL7	-	FALSE
chr2	10270757	A	T	0.00382	RRM2	+	FALSE
chr2	174090331	A	C	0.00901	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	222713503	C	G	0.00860	HHIPL2	-	FALSE
chr1	204524840	A	G	0.00557	MDM4	+	TRUE	AluSx	SINE,Alu
chr2	37327651	T	C	0.00395		.	FALSE
chr2	91843471	C	T	0.00095	LOC654342	-	FALSE
chr19	19793729	A	G	0.00124	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr10	120920588	T	C	0.00304	SFXN4	-	FALSE
chr1	205687351	T	C	2.02150E-05	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	36068196	T	C	0.00376	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	41088377	C	T	8.47840E-10	RIMS3	-	FALSE
chr1	65690461	G	A	0.00115	AK4	+	FALSE
chr1	19984346	A	G	0.00071	MINOS1-NBL1,NBL1	+	FALSE
chr16	69338754	T	C	0.00210	SNTB2	+	FALSE	AluJr	SINE,Alu
chr1	9160975	T	C	0.00347		.	FALSE	AluJb	SINE,Alu
chr1	46075779	A	G	0.00640	NASP	+	TRUE	AluSx4	SINE,Alu
chr3	5258985	T	C	1.48069E-09	EDEM1	+	FALSE
chr19	21304019	A	G	0.00111	ZNF714	+	TRUE	AluY	SINE,Alu
chr12	133298428	A	G	7.41792E-11	PGAM5	+	TRUE	AluSp	SINE,Alu
chr5	9546451	G	A	0.00030	SNHG18	+	FALSE
chr14	74524774	T	C	0.00481	BBOF1,ALDH6A1	+,-	FALSE	AluSc8	SINE,Alu
chr5	137354051	C	T	0.00098	FAM13B	-	FALSE
chr1	31905887	A	C	4.57629E-05	SERINC2	+	FALSE
chr2	203744629	T	C	0.00363		.	FALSE	AluSx1	SINE,Alu
chr2	48025764	C	T	0.00722	MSH6	+	FALSE
chr18	33831189	C	A	0.00763	MOCOS	+	FALSE
chr6	24720539	G	C	0.00225		.	FALSE
chr1	11347150	C	A	0.00016	UBIAD1	+	FALSE
chr10	22824828	A	T	0.00225	PIP4K2A	-	FALSE
chr1	10520331	C	T	2.36721E-05		.	FALSE	AluSx1	SINE,Alu
chr1	93803490	T	C	0.00572	CCDC18-AS1	-	FALSE	AluJr	SINE,Alu
chr4	17802819	T	C	0.00409	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	1650797	A	G	0.00276	CDK11B,CDK11A	-	FALSE
chr10	75008815	T	C	0.00309	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	230461079	G	A	9.74527E-05	PGBD5	-	FALSE
chr1	16717888	G	A	0.00206	SZRD1	+	FALSE
chr2	86249961	T	C	0.00292	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	36068369	T	C	0.00511	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	223436459	A	T	1.48017E-05	FARSB	-	FALSE
chr2	242447628	T	G	0.00674	STK25	-	FALSE
chr1	45975358	A	G	0.00339	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr4	177251328	C	T	9.41230E-05	SPCS3	+	FALSE
chr1	179044169	A	G	0.00039	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	201355943	C	T	0.00355	LAD1	-	FALSE
chr9	132575828	A	T	0.00445	TOR1A	-	FALSE
chr19	13884084	A	G	0.00843	MRI1	+	TRUE	AluSz	SINE,Alu
chr1	19543353	T	C	0.00101	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	19543785	T	C	0.00492	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	27203728	A	T	0.00528		.	FALSE
chr14	31916944	T	C	1.05468E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr7	5085646	C	T	0.00168	RBAK-RBAKDN,RBAK	+	FALSE
chr8	11172477	C	T	0.00805	MTMR9	+	FALSE
chr1	231557255	C	G	0.00056	EGLN1	-	FALSE	(GCC)n	SINE,Alu
chr1	9162234	T	C	0.00896		.	FALSE	AluSx	SINE,Alu
chr1	118166096	C	T	0.00861	FAM46C	+	FALSE
chr7	152342999	T	C	0.00313		.	FALSE	FRAM	SINE,Alu
chr2	203922075	A	G	0.00058	NBEAL1	+	FALSE
chr2	232319524	T	A	0.00245	NCL	-	FALSE
chr1	6582470	T	C	0.00370	NOL9	-	TRUE	AluSx1	SINE,Alu
chr12	9464350	G	C	0.00209	LOC642846	+	FALSE
chr17	49041732	T	C	0.00135	SPAG9	-	TRUE	AluSx	SINE,Alu
chr1	59148136	T	C	0.00244	MYSM1	-	FALSE
chr5	151041886	T	G	0.00176	SPARC	-	FALSE
chr5	37290323	T	C	0.00029		.	FALSE	AluSz	SINE,Alu
chr1	193054574	G	T	0.00511	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr1	10520751	T	C	0.00495	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	10518756	T	C	0.00600		.	FALSE	AluSx1	SINE,Alu
chr1	109856085	G	A	0.00684	SORT1	-	FALSE
chr5	125961487	A	G	0.00776	PHAX	+	FALSE	AluSz6	SINE,Alu
chr7	6063467	G	A	0.00620	EIF2AK1	-	FALSE
chr4	88061645	T	A	0.00049	AFF1	+	FALSE	(TATAT)n	SINE,Alu
chr1	204526554	A	G	0.00194	MDM4	+	TRUE	AluSx	SINE,Alu
chr22	44890573	T	C	1.87764E-05	LDOC1L	-	FALSE
chr1	1668943	A	C	0.00640	SLC35E2	-	FALSE
chr7	65619242	A	G	0.00545	CRCP	+	TRUE	AluSz6	SINE,Alu
chr1	28662186	A	G	0.00403	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	110170896	T	C	5.12229E-06	AMPD2	+	FALSE
chr1	11084103	T	A	0.00044	TARDBP	+	FALSE
chr17	42880118	T	C	0.00140	GJC1	-	TRUE	AluJb	SINE,Alu
chr1	144932151	G	T	0.00643	NBPF20,PDE4DIP	+,-	FALSE
chr1	33149266	A	G	0.00292	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	200941185	T	G	0.00729	KIF21B	-	FALSE
chr1	1594197	C	T	0.00097	CDK11B,SLC35E2B	-	FALSE
chr1	32687475	T	C	0.00785	TMEM234,EIF3I	+,-	FALSE
chr3	105271344	A	G	0.00460	ALCAM	+	FALSE
chr1	19953132	C	A	0.00910	MINOS1,MINOS1-NBL1	+	FALSE
chr1	1152309	A	T	0.00035	SDF4	-	FALSE
chr1	16576836	A	G	0.00885	FBXO42	-	FALSE
chr1	67874696	T	C	0.00014	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	45452227	G	C	0.00084	EIF2B3	-	FALSE
chr2	30864980	A	G	7.96700E-05	LCLAT1	+	FALSE
chr1	139233	C	A	0.00653	LOC729737	-	FALSE
chr12	125512516	A	G	8.94889E-06		.	FALSE	AluY	SINE,Alu
chr1	9328120	A	G	4.35354E-06	H6PD	+	TRUE	AluJr	SINE,Alu
chr2	277003	A	G	1.77913E-11	ACP1	+	FALSE
chr2	198339559	G	T	0.00712	COQ10B	+	FALSE
chr15	90375419	T	C	0.00521	C15orf38-AP3S2,AP3S2	-	TRUE	AluJr	SINE,Alu
chr1	230979207	C	A	0.00643	C1orf198	-	FALSE
chr8	56985612	G	T	0.00028	RPS20	-	FALSE
chr1	6314743	C	T	6.72719E-05	GPR153	-	FALSE
chr10	79800436	T	G	0.00308	RPS24	+	FALSE
chr1	46774783	A	G	1.06423E-10	UQCRH	+	FALSE	(AGG)n	SINE,Alu
chr1	6161108	C	A	0.00071	KCNAB2	+	FALSE
chr1	118069696	T	C	0.00922		.	FALSE
chr1	19585771	A	G	0.00029	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr3	52084404	A	T	0.00032	DUSP7	-	FALSE	(A)n	SINE,Alu
chr1	117617705	A	G	0.00475	TTF2	+	FALSE
chr1	145369476	A	G	0.00332	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr21	33032035	T	A	1.90109E-05	SOD1	+	FALSE
chr1	19542311	T	C	0.00682	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr19	46289409	C	T	6.23760E-05	DMWD	-	FALSE
chr4	153898334	A	G	0.00662	FHDC1	+	FALSE	AluJo	SINE,Alu
chr5	34908535	T	C	0.00054	RAD1	-	FALSE	AluSp	SINE,Alu
chr1	93297590	C	A	0.00325		.	FALSE
chr3	169807548	T	C	0.00665	PHC3	-	TRUE	AluSx1	SINE,Alu
chr1	148594563	G	T	0.00169	NBPF15	+	FALSE
chr4	10076658	T	C	6.66134E-16	WDR1	-	FALSE
chr1	53679878	T	C	0.00348	C1orf123	-	FALSE
chr15	42859452	A	G	0.00123	HAUS2	+	TRUE	AluJb	SINE,Alu
chr1	234740975	G	A	0.00106	IRF2BP2	-	FALSE
chr1	90049040	A	G	0.00190	LRRC8B	+	FALSE
chr3	40577761	A	G	0.00701	ZNF621	+	TRUE	AluSz	SINE,Alu
chr1	89518173	T	A	0.00465	GBP1	-	FALSE
chr5	79923990	T	C	0.00812	DHFR	-	TRUE	AluSp	SINE,Alu
chr1	23884661	G	A	0.00205	ID3	-	FALSE
chr3	183898428	T	G	0.00611	AP2M1	+	FALSE
chr14	24884880	T	G	0.00491	NYNRIN	+	FALSE
chr1	10520684	T	C	0.00125	DFFA	-	TRUE	AluSc8	SINE,Alu
chr15	33063527	C	T	0.00183	FMN1	-	FALSE	AluYk3	SINE,Alu
chr1	45976722	G	T	0.00292	MMACHC,PRDX1	+,-	FALSE
chr1	16959698	G	A	0.00086		.	FALSE
chr1	1636355	A	G	0.00857	CDK11B,CDK11A	-	FALSE
chr2	10586903	A	C	0.00041	ODC1,SNORA80B	-	FALSE
chr4	73957426	G	T	0.00434	ANKRD17	-	FALSE
chr1	68167935	A	G	0.00390	GNG12	-	FALSE
chr6	43747963	G	C	0.00274	VEGFA	+	FALSE
chr1	1252749	T	C	0.00875	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	93307479	C	A	0.00085	FAM69A,RPL5	+,-	FALSE
chr1	204524546	A	G	0.00054	MDM4	+	TRUE	AluY	SINE,Alu
chr1	38423182	G	C	0.00664	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	46076467	A	G	0.00475	NASP	+	TRUE	AluSx	SINE,Alu
chr1	204524914	A	G	0.00766	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	10519932	T	C	0.00323		.	FALSE	AluJr	SINE,Alu
chr1	160967856	T	C	0.00116	F11R	-	TRUE	AluSp	SINE,Alu
chr1	145513113	A	G	0.00505	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr4	76568676	T	A	0.00051	G3BP2	-	FALSE
chr2	86731651	G	A	0.00378	CHMP3,RNF103-CHMP3	-	FALSE
chr7	135285707	G	A	0.00084	NUP205	+	FALSE
chr1	115249239	G	A	0.00034	NRAS	-	FALSE
chr1	45975345	A	G	0.00071	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	10519048	T	C	0.00089		.	FALSE	AluSx3	SINE,Alu
chr1	201846675	C	T	0.00146	IPO9	+	FALSE
chr7	44841799	A	G	0.00693	PPIA	+	TRUE	AluSx	SINE,Alu
chr9	136217449	C	G	0.00158	RPL7A	+	FALSE
chr1	109181317	C	G	0.00597	FAM102B	+	FALSE
chr1	20945264	A	C	0.00605	CDA	+	FALSE
chr2	38971640	A	C	0.00050	SRSF7	-	FALSE
chr1	10517653	T	C	0.00038		.	FALSE	AluSx1	SINE,Alu
chr7	300181	G	A	2.39021E-07	FAM20C	+	FALSE
chr1	10043363	A	G	0.00509	NMNAT1	+	TRUE	AluSx3	SINE,Alu
chr15	63445744	A	T	0.00539	RPS27L	-	FALSE
chr4	2940358	G	A	2.85215E-10	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	20978024	C	A	0.00175	PINK1-AS	-	FALSE
chr1	155695985	A	G	0.00031	DAP3	+	TRUE	AluSp	SINE,Alu
chr2	152334055	A	G	0.00064		.	FALSE	AluY	SINE,Alu
chr1	92862457	A	G	0.00974		.	FALSE	AluSp	SINE,Alu
chr1	121134245	C	T	0.00174	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	(TTTCCT)n	SINE,Alu
chr4	119551832	G	A	0.00522	LOC729218	+	FALSE
chr1	202861470	C	A	0.00441	KLHL12	-	FALSE
chrX	2824894	T	C	0.00770	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	1650787	T	C	0.00071	CDK11B,CDK11A	-	FALSE
chr15	93568295	G	A	0.00225	CHD2	+	FALSE
chr12	1611798	C	T	0.00338	LINC00942	+	FALSE
chr2	114356360	G	A	0.00520	WASH2P	+	FALSE
chr1	182569291	A	T	0.00979	RGS16	-	FALSE
chr1	6283551	T	C	0.00324	ICMT	-	FALSE
chr16	81064533	A	G	0.00686	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	16889138	T	C	0.00356	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr1	10517567	T	C	0.00578		.	FALSE	AluSx1	SINE,Alu
chr1	36770073	A	T	4.33965E-05	THRAP3	+	FALSE
chr7	21941393	A	T	0.00937	CDCA7L	-	FALSE
chr1	160920966	C	T	0.00980	ITLN2	-	FALSE
chr14	23794557	T	A	0.00983	BCL2L2-PABPN1,PABPN1	+	FALSE	A-rich	SINE,Alu
chr6	44417159	A	G	0.00959	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	16893691	C	A	0.00141	NBPF1	-	FALSE
chr10	62554474	T	G	6.65730E-05	CDK1	+	FALSE
chr6	43747964	G	A	0.00542	VEGFA	+	FALSE
chr7	44800040	C	A	0.00565	ZMIZ2	+	FALSE
chr1	146650289	C	T	0.00967	PDIA3P1	+	FALSE
chr7	11148863	T	A	0.00455	PHF14	+	FALSE
chr1	85331816	A	G	0.00921	LPAR3	-	FALSE
chr15	41591417	A	G	2.88542E-07	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr5	118175329	T	C	2.47285E-05	DTWD2	-	TRUE	AluJr	SINE,Alu
chr3	124950419	C	A	0.00060	ZNF148	-	FALSE
chr3	86992161	C	G	0.00050	VGLL3	-	FALSE	(GT)n	SINE,Alu
chr1	150548877	C	G	0.00071	MCL1	-	FALSE
chr1	109239334	A	T	0.00035	PRPF38B	+	FALSE
chr1	145512944	A	G	0.00110	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	145689537	A	G	0.00341	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	46269493	G	C	0.00233	MAST2	+	FALSE
chr3	17199207	T	A	0.00075	TBC1D5	-	FALSE	A-rich	SINE,Alu
chr12	72182168	G	C	0.00867	RAB21	+	FALSE
chr1	24175288	C	G	0.00646	FUCA1	-	FALSE
chr1	16929100	C	T	0.00249	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr16	75480021	T	C	0.00270	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr1	45120664	C	T	0.00437	TMEM53	-	FALSE
chr1	172411496	A	G	0.00361	C1orf105,PIGC	+,-	FALSE
chr3	9517369	C	T	0.00395	SETD5	+	FALSE
chr2	232319610	A	T	0.00029	NCL	-	FALSE
chr2	85837797	T	C	0.00097	USP39,C2orf68	+,-	FALSE	AluSx	SINE,Alu
chr3	10143199	A	G	0.00496	FANCD2,FANCD2OS	+,-	FALSE	AluSc8	SINE,Alu
chr3	196080531	T	C	0.00952	UBXN7	-	TRUE	AluSx	SINE,Alu
chr1	1288481	C	A	0.00013	MXRA8	-	FALSE
chr3	156259331	T	C	0.00088	SSR3	-	TRUE	AluSq2	SINE,Alu
chr11	62407518	T	C	3.11115E-06	GANAB	-	TRUE	AluY	SINE,Alu
chr16	80636808	C	T	0.00881	CDYL2	-	FALSE
chr3	57743171	C	T	1.04824E-07	SLMAP	+	FALSE
chr1	36067925	T	C	4.53272E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	16912029	C	G	0.00177	NBPF1	-	FALSE
chr2	223807974	A	T	0.00593	ACSL3	+	FALSE
chr1	35223881	G	A	0.00228	GJB5	+	FALSE
chr3	141879765	T	C	0.00212	GK5	-	TRUE	AluJr	SINE,Alu
chr1	31905888	C	A	0.00667	SERINC2	+	FALSE
chr1	6282383	T	C	0.00371	ICMT	-	TRUE	AluSz	SINE,Alu
chr13	110407598	A	G	0.00222	IRS2	-	FALSE
chr2	109401284	G	C	0.00059	RANBP2	+	FALSE
chr5	178293266	G	A	0.00924	ZNF354B	+	FALSE
chr1	28661767	A	G	0.00242	MED18	+	TRUE	AluSg	SINE,Alu
chr4	169847647	A	T	0.00328	PALLD	+	FALSE
chr17	65335253	T	C	0.00344	PSMD12	-	TRUE	AluSx	SINE,Alu
chr2	200792307	G	A	0.00596	C2orf69	+	FALSE
chr17	56049824	T	C	5.91767E-06	VEZF1	-	TRUE
chr2	91805938	A	G	0.00084		.	FALSE	MLT1H1	SINE,Alu
chr1	65898873	G	C	0.00530	LEPR,LEPROT	+	FALSE
chr1	24999463	G	T	0.00012	SRRM1	+	FALSE	(T)n	SINE,Alu
chr1	23636016	T	G	0.00796	HNRNPR	-	FALSE
chrX	3526658	A	T	0.00152	PRKX	-	FALSE	(AC)n	SINE,Alu
chr3	197612406	A	G	0.00450		.	FALSE	AluSp	SINE,Alu
chr1	16892135	G	A	0.00182	NBPF1	-	FALSE
chr6	116600810	G	A	0.00028	DSE,TSPYL1	+,-	FALSE
chr8	48890293	A	G	0.00125	MCM4	+	TRUE	AluJb	SINE,Alu
chr3	33430398	T	A	0.00025	UBP1	-	FALSE
chr2	179973026	T	C	0.00210	SESTD1	-	FALSE
chr7	44917278	T	C	0.00461	PURB	-	TRUE	AluSz	SINE,Alu
chr9	115446725	T	C	0.00917	INIP	-	TRUE	AluJr	SINE,Alu
chr1	3545191	C	T	5.51731E-05	TPRG1L	+	FALSE
chr1	220232066	T	C	0.00673	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr5	95130804	C	T	0.00792	RHOBTB3	+	FALSE	AluSz	SINE,Alu
chr11	118915753	T	C	8.93388E-07	HYOU1	-	FALSE
chr1	2125114	C	T	8.70493E-12	FAAP20	-	FALSE
chr1	9642827	G	A	0.00521	SLC25A33	+	FALSE
chr1	2522392	G	A	0.00227	FAM213B,MMEL1	+,-	FALSE
chr1	202821382	T	C	0.00983		.	FALSE	AluJr	SINE,Alu
chr1	567489	T	C	0.00119		.	FALSE
chr3	194349178	C	T	0.00881	TMEM44	-	FALSE
chr4	139088295	C	T	0.00537	SLC7A11-AS1,SLC7A11	+,-	FALSE
chr1	148556726	G	T	0.00976		.	FALSE
chr20	25428646	A	G	9.98122E-05	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	209602381	G	A	0.00057	MIR205HG	+	FALSE	AluJb	SINE,Alu
chr1	53288870	A	G	0.00501	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	6257826	T	C	0.00560	RPL22	-	FALSE
chr2	86979093	G	A	0.00591	RMND5A	+	FALSE
chr17	3512398	T	C	0.00709	SHPK,TRPV1	-	TRUE	AluSx	SINE,Alu
chr1	197070776	C	T	0.00600	ASPM	-	FALSE
chr1	36067838	T	C	0.00081	PSMB2	-	TRUE	AluSz	SINE,Alu
chr17	57279257	A	G	0.00077	PRR11	+	TRUE	AluSq2	SINE,Alu
chr2	191556844	T	A	0.00261	NAB1	+	FALSE
chr1	1252468	T	C	0.00096	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr2	37329300	T	C	0.00590		.	FALSE	AluJr4	SINE,Alu
chr1	13942885	C	A	0.00038	PDPN	+	FALSE
chr1	20976163	C	T	1.02809E-07	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	179044242	A	G	0.00335	FAM20B	+	TRUE	AluSx	SINE,Alu
chr3	99517466	G	A	0.00088	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr2	61405795	G	T	0.00061	AHSA2	+	FALSE
chr4	120979130	T	C	0.00729		.	FALSE	AluSg4	SINE,Alu
chr1	156692052	T	A	0.00369	ISG20L2	-	FALSE	AluY	SINE,Alu
chr1	86815303	T	C	0.00571	ODF2L	-	FALSE
chr1	242012149	C	T	0.00334	EXO1	+	FALSE
chr1	16895634	T	G	0.00472	NBPF1	-	FALSE
chr2	36776054	C	T	0.00117	CRIM1	+	FALSE
chr2	201842323	T	C	0.00591	FAM126B	-	TRUE	AluJb	SINE,Alu
chr5	43298557	C	T	0.00643	HMGCS1	-	FALSE
chr3	195451488	C	T	1.73907E-06	MUC20	+	FALSE
chr1	24134721	T	C	0.00113	HMGCL	-	FALSE
chr1	87811103	T	G	0.00028	LMO4	+	FALSE
chr1	220231946	T	C	0.00439	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr6	32796463	A	C	0.00680		.	FALSE	(CCCCA)n	SINE,Alu
chr12	125511958	A	G	0.00010	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	247319705	T	G	6.58458E-05	ZNF124	-	FALSE
chr1	16891333	C	T	0.00281	NBPF1	-	FALSE
chr1	6283418	T	C	0.00464	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	155429590	G	T	0.00356	ASH1L	-	FALSE
chr1	118170485	T	C	0.00281	FAM46C	+	FALSE	(TG)n	SINE,Alu
chr10	15119789	T	C	0.00366	ACBD7	-	TRUE	AluSx1	SINE,Alu
chr3	56654600	C	G	0.00490	CCDC66,FAM208A	+,-	FALSE
chr1	10517653	T	C	0.00792		.	FALSE	AluSx1	SINE,Alu
chr2	3502198	T	A	0.00764	ADI1	-	FALSE
chr1	169293721	G	A	0.00978	NME7	-	FALSE
chr1	6583066	T	C	0.00209	NOL9	-	TRUE	AluSx4	SINE,Alu
chr3	169808354	G	A	0.00015	PHC3	-	FALSE
chr1	45244053	A	G	0.00621	RPS8	+	FALSE
chr1	22418122	T	C	0.00790	CDC42	+	FALSE

RBP	TRA2A
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR030GZQ
Platform	HiSeq
Pubmed ID	32252787

TRA2A - Target Gene Network