RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	65692499	C	T	0.00516	AK4	+	FALSE	(T)n	SINE,Alu
chr3	40578997	A	G	0.00094	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	27662666	A	G	0.00799	TMEM222	+	FALSE
chr14	92629726	T	A	0.00787	CPSF2	+	FALSE
chr2	37479862	C	T	0.00603	PRKD3	-	FALSE
chr3	122291688	A	G	0.00597	DTX3L	+	FALSE	AluSz	SINE,Alu
chr14	75202722	A	G	0.00022	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	138266	C	T	7.30419E-05	LOC729737	-	FALSE
chr1	180082702	G	C	0.00019	CEP350	+	FALSE
chr1	117531813	T	C	0.00751	PTGFRN	+	FALSE
chr1	160967843	T	C	0.00247	F11R	-	TRUE	AluSp	SINE,Alu
chr3	44791398	T	C	0.00081	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr3	195461650	A	G	0.00062		.	FALSE	AluSz	SINE,Alu
chr4	17804879	T	C	0.00863	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	86816600	A	G	0.00830	ODF2L	-	FALSE	L1PA7	SINE,Alu
chr1	16203172	A	G	8.98827E-07	SPEN	+	FALSE
chr3	155660873	A	G	0.00018		.	FALSE	AluSz	SINE,Alu
chr4	165998958	T	C	0.00021	TMEM192	-	TRUE	Alu	SINE,Alu
chr1	36386905	G	T	0.00065	AGO1	+	FALSE
chr3	100083425	G	A	0.00717	TOMM70	-	FALSE	FAM	SINE,Alu
chr1	231557138	C	G	0.00394	EGLN1	-	FALSE
chr1	145293012	G	A	0.00250	NBPF20	+	FALSE
chr1	54691922	T	A	0.00219	SSBP3	-	FALSE
chr2	191799592	A	G	2.07606E-11	GLS	+	TRUE
chr1	6283260	T	C	0.00071	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	184761162	T	C	0.00685	FAM129A	-	TRUE	AluJo	SINE,Alu
chr1	27107950	G	A	0.00249	ARID1A	+	FALSE
chr2	32533707	A	G	0.00054		.	FALSE	AluSp	SINE,Alu
chr1	47133835	C	A	1.43471E-05	ATPAF1	-	FALSE
chr3	120114128	A	C	6.21214E-12	FSTL1	-	FALSE
chr1	26449882	A	G	0.00783	PDIK1L	+	FALSE
chr7	63808867	C	A	0.00556	ZNF736	+	FALSE
chr5	43380822	T	C	0.00462	CCL28	-	TRUE	AluJb	SINE,Alu
chr19	39433138	G	A	0.00276	FBXO17	-	FALSE	AluJb	SINE,Alu
chr1	36068196	T	C	0.00376	PSMB2	-	TRUE	AluSc	SINE,Alu
chrX	123045103	A	G	0.00996	XIAP	+	TRUE	AluSp	SINE,Alu
chr1	6283264	T	C	0.00127	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	247319707	C	T	3.10675E-05	ZNF124	-	FALSE
chr1	154557171	G	A	0.00045	ADAR	-	FALSE	A-rich	SINE,Alu
chr1	10518797	T	C	0.00421		.	FALSE	AluSx1	SINE,Alu
chr1	1337735	T	G	3.46713E-05	MRPL20	-	FALSE
chr1	10519973	T	C	0.00586		.	FALSE	AluJr	SINE,Alu
chr2	37431604	A	G	0.00876	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr3	73431830	A	G	0.00157	PDZRN3	-	FALSE
chr2	217366192	T	A	0.00067		.	FALSE
chr2	47398328	G	A	0.00434	CALM2	-	FALSE
chr1	115313038	G	A	0.00144	SIKE1	-	FALSE
chr4	6302519	G	A	0.00195	WFS1	+	FALSE
chr2	72403387	C	A	0.00486	EXOC6B	-	FALSE
chr7	115898442	G	C	2.36867E-05	TES	+	FALSE	AluSx	SINE,Alu
chr1	44463185	T	G	0.00427	SLC6A9	-	FALSE
chr1	118502771	A	G	0.00466	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr1	172410967	G	A	1.85684E-05	C1orf105,PIGC	+,-	FALSE
chr1	145281543	C	T	0.00999	NBPF20,NOTCH2NL	+	FALSE
chr5	145506100	G	A	0.00586	LARS	-	FALSE
chr1	14590	G	A	0.00050	WASH7P	-	FALSE
chr1	33148216	A	G	0.00036	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	55207986	T	A	0.00872	MROH7-TTC4,TTC4	+	FALSE
chr1	20976075	T	C	0.00351	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr2	32535287	A	G	0.00891		.	FALSE	FLAM_C	SINE,Alu
chr1	95363042	C	G	0.00110	CNN3	-	FALSE
chr1	1252248	A	G	0.00055	CPSF3L	-	FALSE	AluSx	SINE,Alu
chr2	74334790	A	G	0.00870	TET3	+	FALSE
chr2	210885022	C	T	0.00325	RPE	+	FALSE
chr1	10519936	T	C	0.00072		.	FALSE	AluJr	SINE,Alu
chr1	26608009	T	A	0.00496	SH3BGRL3	+	FALSE
chr6	90344605	T	C	0.00013	LYRM2	-	TRUE	AluSz6	SINE,Alu
chr1	12073251	G	T	0.00957	MFN2	+	FALSE
chr1	85785548	C	T	0.00220	DDAH1	-	FALSE
chr20	62598815	C	T	0.00711	ZNF512B	-	FALSE
chr1	1534676	C	T	4.01953E-10	FNDC10	-	FALSE
chr1	109475629	A	G	0.00305	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	168220489	A	G	0.00126		.	FALSE	AluSz6	SINE,Alu
chr2	172178588	T	C	0.00369	METTL8	-	TRUE	AluSx3	SINE,Alu
chr8	48889659	A	G	1.71928E-05	MCM4	+	TRUE	AluSx3	SINE,Alu
chr9	28403	G	T	1.21037E-06	WASH1	-	FALSE	MIR	SINE,Alu
chr1	44685732	T	C	9.79150E-12	DMAP1	+	FALSE
chr1	36068364	T	C	0.00013	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	204526795	A	G	0.00199	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	27205632	T	C	0.00471		.	FALSE	FLAM_A	SINE,Alu
chr2	172412829	T	A	0.00477	CYBRD1	+	FALSE
chr3	127341226	A	G	0.00049	MCM2	+	FALSE
chr5	96110613	T	A	0.00993	ERAP1	-	FALSE
chr1	201845880	T	A	0.00491	IPO9	+	FALSE
chr3	101399945	A	G	0.00965	RPL24	-	FALSE
chr1	28261661	G	A	0.00872	SMPDL3B	+	FALSE
chr2	114352179	G	A	1.68965E-05	WASH2P	+	FALSE
chr3	45722253	A	G	0.00663	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	100203693	G	A	0.00142	FRRS1	-	FALSE
chr1	145369476	A	G	0.00332	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr2	176042871	A	T	0.00204	ATP5G3	-	FALSE
chr5	175811094	C	T	0.00700	NOP16	-	FALSE
chr1	92941357	A	G	0.00296	GFI1	-	FALSE
chr1	45976269	C	G	0.00039	MMACHC	+	FALSE
chr1	220231959	T	C	2.75997E-05	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	154323557	C	T	0.00018	ATP8B2	+	FALSE
chr1	144594373	C	G	0.00715	NBPF20	+	FALSE
chr1	19543247	T	C	5.35430E-06	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	114939633	G	A	0.00188	TRIM33	-	FALSE
chr2	61277463	A	G	0.00826	PEX13	+	TRUE	AluSx	SINE,Alu
chr3	105258861	A	G	0.00030	ALCAM	+	FALSE
chr2	99812447	A	G	0.00587	MRPL30	+	TRUE	AluSx	SINE,Alu
chr3	126752934	T	C	0.00038	PLXNA1	+	FALSE
chr7	149318375	C	T	0.00383	ZNF767P	-	FALSE
chr2	9661424	G	C	0.00130	ADAM17	-	FALSE
chr1	148004475	C	G	7.81276E-06	NBPF8	-	FALSE
chr1	180082720	G	A	0.00577	CEP350	+	FALSE
chr6	150047423	T	C	0.00688	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	16919961	C	T	0.00133	NBPF1	-	FALSE
chr18	29410068	C	T	0.00807	TRAPPC8	-	FALSE
chr3	191100561	C	A	2.52744E-07	CCDC50	+	FALSE
chr3	48787011	T	C	0.00040	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr18	2804129	G	A	0.00157	SMCHD1	+	FALSE
chr3	122283292	C	G	0.00047	DTX3L,PARP9	+,-	FALSE
chr1	214527252	G	A	0.00830	PTPN14	-	FALSE	MADE2	SINE,Alu
chr1	10517512	T	C	0.00514		.	FALSE	AluSx1	SINE,Alu
chr6	122765962	T	A	0.00362	SERINC1	-	FALSE
chr5	175816759	T	A	0.00018		.	FALSE
chr12	98943182	A	G	1.41026E-08	TMPO	+	TRUE	AluSz	SINE,Alu
chr14	63841404	T	A	0.00470	PPP2R5E	-	FALSE	(T)n	SINE,Alu
chr1	230979207	C	A	0.00643	C1orf198	-	FALSE
chr11	76733946	A	G	0.00725	ACER3	+	FALSE	A-rich	SINE,Alu
chr5	40715440	A	C	0.00646	TTC33	-	FALSE
chr1	120611964	G	C	0.00211	NOTCH2	-	FALSE
chr1	32373831	T	G	0.00252	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr1	9910357	A	T	0.00056	CTNNBIP1	-	FALSE
chr7	100804140	C	T	0.00377	AP1S1	+	FALSE
chr2	37328034	T	C	0.00035		.	FALSE
chr1	79356400	C	T	0.00714	ADGRL4	-	FALSE
chr1	183596136	A	G	0.00123	ARPC5	-	FALSE
chr7	29962586	G	A	0.00051	SCRN1	-	FALSE
chr1	31732892	G	A	0.00408	SNRNP40	-	FALSE
chr5	43298557	C	T	0.00643	HMGCS1	-	FALSE
chr19	198079	T	C	0.00933	LINC01002	-	FALSE
chr3	28390351	A	G	0.00200	AZI2	-	FALSE
chr1	53288862	A	G	0.00799	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr3	184766301	T	C	0.00025	VPS8	+	FALSE
chr1	1597403	C	T	0.00015	CDK11B,SLC35E2B	-	FALSE
chr20	25427865	A	G	0.00018	GINS1	+	FALSE	AluSz	SINE,Alu
chr1	16935130	C	T	0.00019	NBPF1	-	FALSE
chr6	29911284	T	C	0.00019		.	FALSE
chr1	165370475	G	C	0.00256	RXRG	-	FALSE
chr3	33038221	C	T	0.00379	GLB1	-	FALSE
chr5	56177849	C	G	0.00921	MAP3K1	+	FALSE	(CAA)n	SINE,Alu
chr3	16357708	A	G	0.00098	RFTN1	-	FALSE
chr1	79109353	G	T	0.00214	IFI44L	+	FALSE	LTR26	SINE,Alu
chr1	45975669	A	G	0.00695	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr3	47125385	G	A	0.00496	SETD2	-	FALSE
chr1	230975454	A	G	0.00438	C1orf198	-	FALSE
chr8	42883403	A	G	0.00204	HOOK3	+	TRUE	AluJb	SINE,Alu
chr1	10517635	T	C	7.30839E-07		.	FALSE	AluSx1	SINE,Alu
chr1	182353198	A	T	0.00473	GLUL	-	FALSE
chr1	1252510	T	C	1.62601E-05	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	90049040	A	G	0.00190	LRRC8B	+	FALSE
chr2	99772827	A	G	0.00108	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr19	9672436	T	C	3.01645E-08		.	FALSE	AluJr	SINE,Alu
chr7	44918768	T	C	3.66924E-05	PURB	-	TRUE	AluSg	SINE,Alu
chr3	65341374	T	A	0.00029	MAGI1	-	FALSE
chr3	52288956	A	T	0.00042	WDR82	-	FALSE
chr1	1337738	C	A	4.14710E-05	MRPL20	-	FALSE
chr1	1345002	A	G	0.00141		.	FALSE	AluSg	SINE,Alu
chr1	19543249	T	C	0.00564	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	16910172	G	A	0.00085	NBPF1	-	FALSE
chr1	28930023	G	A	0.00037	TAF12	-	FALSE
chr1	95658346	T	A	0.00961	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr17	65335316	T	C	0.00296	PSMD12	-	TRUE	AluSx	SINE,Alu
chr2	87002706	G	A	0.00178	RMND5A	+	FALSE
chr17	48155425	G	A	0.00603	ITGA3	+	FALSE
chr2	191829133	G	A	0.00097	GLS	+	FALSE
chr1	16893686	G	C	0.00386	NBPF1	-	FALSE
chr1	82453022	A	G	0.00532	ADGRL2	+	FALSE
chr5	156905300	A	C	0.00870	ADAM19	-	FALSE	MER92B	SINE,Alu
chr2	10586904	C	T	0.00041	ODC1,SNORA80B	-	FALSE
chr17	26672363	G	A	0.00599	TNFAIP1	+	FALSE
chr1	19934893	C	A	0.00171	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr3	10193743	T	C	0.00456	VHL	+	FALSE	AluJr	SINE,Alu
chr1	145689566	A	G	0.00331	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr4	187628394	G	A	0.00000	FAT1	-	FALSE
chr1	36390527	A	G	0.00065		.	FALSE	L2c	SINE,Alu
chr1	46828657	C	T	0.00378	NSUN4	+	FALSE
chr8	12880246	A	G	0.00012	KIAA1456	+	TRUE	AluJo	SINE,Alu
chr2	128951941	A	G	0.00624	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr2	112252629	A	C	0.00107	MIR4435-2HG	-	FALSE
chr3	172117458	A	C	0.00011	FNDC3B	+	FALSE
chr1	109818151	T	C	0.00855	CELSR2	+	FALSE
chr5	37290571	T	C	0.00097		.	FALSE	AluSz	SINE,Alu
chr2	9629305	A	T	0.00591	ADAM17	-	FALSE
chr1	1245164	C	T	0.00318	PUSL1	+	FALSE
chr3	125033835	T	G	0.00385	ZNF148	-	FALSE	AluJb	SINE,Alu
chr4	57326291	A	G	0.00279	PAICS	+	TRUE	AluJr	SINE,Alu
chr2	38522141	G	T	0.00147	ATL2	-	FALSE
chr7	135285707	G	A	0.00084	NUP205	+	FALSE
chr7	91742141	T	A	0.00620	CYP51A1	-	FALSE	AluSx3	SINE,Alu
chr1	53359745	A	G	0.00661	ZYG11A	+	TRUE	AluSx4	SINE,Alu
chr1	193054574	G	T	0.00511	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr4	165999189	T	C	0.00614	TMEM192	-	TRUE	FLAM_C	SINE,Alu
chr14	74388908	T	C	0.00835	ZNF410	+	FALSE
chr14	103372469	A	C	0.00683	TRAF3	+	FALSE	(AC)n	SINE,Alu
chr1	36770621	G	T	0.00424	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	1684347	C	T	0.00550	NADK	-	FALSE
chr4	2841551	A	G	0.00258	SH3BP2	+	TRUE	AluJr	SINE,Alu
chr20	62572487	A	C	0.00390	UCKL1	-	FALSE
chr1	156005447	C	A	0.00337	UBQLN4	-	FALSE
chr4	88061645	T	A	0.00049	AFF1	+	FALSE	(TATAT)n	SINE,Alu
chr7	44917281	T	C	0.00222	PURB	-	TRUE	AluSz	SINE,Alu
chr9	85861582	T	A	0.00604	FRMD3	-	FALSE	(TC)n	SINE,Alu
chr1	19586532	A	G	0.00769	MRTO4	+	TRUE	AluSz	SINE,Alu
chr7	112579815	G	T	0.00997	BMT2	-	FALSE	(CGC)n	SINE,Alu
chr19	16661541	T	C	0.00120	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr15	41591457	A	G	1.25234E-05	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr9	37503313	A	G	0.00584	POLR1E	+	TRUE	AluJb	SINE,Alu
chr5	37290554	T	C	0.00010		.	FALSE	AluSz	SINE,Alu
chr1	110136458	A	G	0.00136	GNAI3	+	FALSE
chr17	49041732	T	C	0.00135	SPAG9	-	TRUE	AluSx	SINE,Alu
chr3	196466874	G	T	0.00226	PAK2	+	FALSE
chr3	184429155	A	T	0.00056	MAGEF1	-	FALSE
chr5	118174745	T	C	0.00084	DTWD2	-	TRUE	AluY	SINE,Alu
chr2	187544223	T	G	0.00254	ITGAV	+	FALSE
chr1	28826150	A	G	0.00048	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	10517688	T	C	0.00630		.	FALSE	AluSx1	SINE,Alu
chr17	42879245	T	C	0.00834	GJC1	-	TRUE	AluSx1	SINE,Alu
chr1	120162587	G	A	0.00730	ZNF697	-	FALSE
chr1	1018144	T	C	0.00019	C1orf159	-	FALSE
chr17	73940888	T	C	2.69053E-06	ACOX1	-	TRUE	AluSx1	SINE,Alu
chr6	32800221	C	T	0.00900		.	FALSE	(GCATCA)n	SINE,Alu
chr2	26399214	G	A	0.00187	GAREM2	+	FALSE
chr1	9162348	T	C	0.00824		.	FALSE	AluSx	SINE,Alu
chr1	26188238	G	A	0.00148	PAQR7	-	FALSE	AluSp	SINE,Alu
chr4	187647832	C	G	0.00592		.	FALSE
chr7	44053729	T	C	0.00316	POLR2J4	-	FALSE	AluSg	SINE,Alu
chr1	101444068	A	T	0.00920	SLC30A7	+	FALSE	MIR3	SINE,Alu
chr2	91805816	G	A	2.75786E-10		.	FALSE
chr16	28620957	T	C	0.00753	SULT1A1	-	TRUE	AluJr	SINE,Alu
chr1	109465170	T	C	0.00565	GPSM2	+	FALSE
chr3	126755134	C	T	0.00920	PLXNA1	+	FALSE
chr2	1636938	C	T	0.00072	PXDN	-	FALSE	(T)n	SINE,Alu
chr5	109204057	T	A	0.00614	MAN2A1	+	FALSE
chr2	128952075	A	G	0.00919	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr6	111591610	A	G	0.00105		.	FALSE	FLAM_A	SINE,Alu
chr16	10623660	T	C	0.00074	EMP2	-	TRUE	AluSp	SINE,Alu
chr14	53242674	T	C	1.74446E-05	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr2	118589029	T	G	0.00058	DDX18	+	FALSE
chr14	75202312	A	G	3.27721E-05	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	10042987	A	G	0.00488	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	161559466	C	A	0.00491	FCGR2C	+	FALSE
chr1	6694574	G	A	0.00983	THAP3,DNAJC11	+,-	FALSE
chr1	160967855	T	C	0.00548	F11R	-	TRUE	AluSp	SINE,Alu
chr1	6582149	T	C	0.00173	NOL9	-	TRUE	AluSq4	SINE,Alu
chr1	32631809	C	T	2.91083E-08	KPNA6	+	FALSE
chr1	86852621	A	G	0.00930	ODF2L	-	FALSE
chr1	119574537	G	A	0.00935	WARS2	-	FALSE
chr1	46075719	A	G	0.00461	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	35648711	A	C	0.00377	SFPQ	-	FALSE
chr17	62541203	G	A	0.00660	SMURF2	-	FALSE
chr2	61764916	A	C	0.00361	XPO1	-	FALSE	(AC)n	SINE,Alu
chr4	57801196	G	A	0.00485	REST	+	FALSE
chr22	36677549	C	T	0.00040	MYH9	-	FALSE
chr1	9328120	A	G	1.75282E-05	H6PD	+	TRUE	AluJr	SINE,Alu
chr2	176791250	T	C	0.00078	LNPK	-	TRUE	MSTD	SINE,Alu
chr1	179876988	C	G	0.00047	TOR1AIP1	+	FALSE
chr1	11783105	A	G	4.69824E-05		.	FALSE	AluSx	SINE,Alu
chr1	20978332	A	T	0.00765	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr1	35817023	G	C	0.00030	ZMYM4	+	FALSE
chr8	71550832	T	C	0.00725	LACTB2-AS1,LACTB2	+,-	FALSE
chr1	32661600	C	T	0.00584	TXLNA	+	FALSE	(T)n	SINE,Alu
chrX	2824979	T	C	0.00049	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	38155699	T	G	0.00824	C1orf109	-	FALSE	AluSx1	SINE,Alu
chr1	85787118	G	C	0.00104	DDAH1	-	FALSE
chr1	28835201	C	T	0.00371	SNHG3,RCC1,SNORA73B	+	FALSE	U17	SINE,Alu
chr1	19543459	T	C	0.00395	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	10517653	T	C	0.00228		.	FALSE	AluSx1	SINE,Alu
chr3	179117128	T	C	0.00112	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	203277245	G	A	0.00115	BTG2	+	FALSE
chr3	195701389	C	A	0.00227	SDHAP1	-	FALSE
chr3	141879810	T	C	0.00348	GK5	-	FALSE	AluJr	SINE,Alu
chr1	165631670	T	G	0.00197	ALDH9A1	-	FALSE
chr3	23958355	C	T	0.00997	NKIRAS1,RPL15	+,-	FALSE
chr1	114226056	C	A	0.00883	MAGI3	+	FALSE
chr12	53936878	G	T	0.00036	ATF7	-	FALSE
chr5	151041885	G	T	0.00644	SPARC	-	FALSE
chr1	116943511	T	C	0.00236	ATP1A1,ATP1A1-AS1	+,-	FALSE
chr1	145512944	A	G	0.00110	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	179312752	C	T	0.00106	SOAT1	+	FALSE
chr3	14986110	T	C	0.00051	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	117645998	A	G	0.00057		.	FALSE
chr1	224573601	C	T	0.00587	WDR26	-	FALSE
chr1	145282799	G	A	0.00081	NBPF20,NOTCH2NL	+	FALSE
chr4	57326156	A	G	0.00170	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	120612154	C	G	0.00054	NOTCH2	-	FALSE
chr1	144606963	G	T	0.00080	NBPF20	+	FALSE
chr1	11721616	G	A	0.00243	FBXO44	+	FALSE
chr1	10042987	A	G	3.47016E-05	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr3	73116347	T	A	0.00109	PPP4R2	+	FALSE
chr2	132278713	T	C	0.00317	LOC150776	+	FALSE
chr2	206986926	T	C	0.00478		.	FALSE	AluJr	SINE,Alu
chr7	123390143	G	A	0.00910		.	FALSE
chr1	12638964	T	C	0.00884	DHRS3	-	FALSE
chr16	48386354	A	G	0.00064	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr1	144931727	G	A	0.00521	NBPF20,PDE4DIP	+,-	FALSE
chr1	179042905	A	G	0.00034	FAM20B	+	TRUE
chr5	43175369	G	T	7.56035E-05	ZNF131	+	FALSE
chr7	6501829	T	A	0.00124	KDELR2	-	FALSE
chr1	44402565	G	A	0.00010	ARTN	+	FALSE
chr1	6283260	T	C	0.00402	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	16894514	C	T	0.00348	NBPF1	-	FALSE
chr7	102089261	A	G	0.00028	ORAI2	+	TRUE	AluSq2	SINE,Alu
chr2	37330614	T	C	0.00410		.	FALSE	AluSq2	SINE,Alu
chr1	6283348	T	C	0.00247	ICMT	-	TRUE	AluSx3	SINE,Alu
chr16	74698531	T	C	0.00702	RFWD3	-	TRUE	AluSx3	SINE,Alu
chr1	148556087	G	C	0.00486		.	FALSE
chr3	10143199	A	G	0.00496	FANCD2,FANCD2OS	+,-	FALSE	AluSc8	SINE,Alu
chr2	69688901	T	C	0.00503	AAK1	-	TRUE	AluSq2	SINE,Alu
chr5	130729522	T	G	0.00506	CDC42SE2	+	FALSE	(T)n	SINE,Alu
chr1	55541174	A	G	0.00038	USP24	-	FALSE
chr1	26796922	G	C	0.00401	DHDDS	+	FALSE	FLAM_C	SINE,Alu
chr1	62628606	A	G	0.00164	PATJ	+	TRUE	AluSg4	SINE,Alu
chr1	89525966	T	C	0.00039	GBP1	-	FALSE
chr8	143413136	C	T	0.00267	TSNARE1	-	FALSE
chr1	109818161	C	T	6.45247E-05	CELSR2	+	FALSE
chr1	89447839	C	G	0.00488	KYAT3,RBMXL1	-	FALSE
chr17	5377119	A	T	0.00043	DERL2	-	FALSE	FLAM_C	SINE,Alu
chr4	38016395	T	G	0.00537	TBC1D1	+	FALSE
chr3	124948045	G	C	0.00784	ZNF148	-	FALSE
chr2	37328034	T	C	0.00046		.	FALSE
chr12	120898553	A	G	0.00233	GATC	+	TRUE	AluY	SINE,Alu
chr10	98281480	T	A	0.00620	TM9SF3	-	FALSE
chr3	169807548	T	C	0.00665	PHC3	-	TRUE	AluSx1	SINE,Alu
chr5	53841238	G	T	0.00267	SNX18	+	FALSE
chr1	225678219	T	C	0.00080	ENAH	-	TRUE	AluSx	SINE,Alu
chr1	144596446	A	G	0.00124	NBPF20	+	TRUE	AluJb	SINE,Alu
chr1	45244413	T	A	0.00750		.	FALSE
chr16	81064656	A	G	0.00120	CENPN	+	TRUE	AluSg	SINE,Alu
chr3	10290513	C	A	0.00577	TATDN2	+	FALSE
chr19	53155567	T	C	0.00137	ZNF83	-	TRUE	AluSg	SINE,Alu
chr1	14106404	G	C	0.00156	PRDM2	+	FALSE
chr3	194361676	C	T	0.00378	LSG1	-	FALSE	MSTA	SINE,Alu
chr1	168215575	G	A	0.00688	ANKRD36BP1	-	FALSE
chr5	118174733	T	C	0.00037	DTWD2	-	TRUE	AluY	SINE,Alu
chr3	156259299	T	C	0.00097	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	9162206	T	C	0.00882		.	FALSE	AluSx	SINE,Alu
chr1	36282608	G	T	0.00886	AGO4	+	FALSE
chr3	50139142	A	G	0.00467	RBM5	+	FALSE
chr3	191115082	G	C	0.00980	CCDC50	+	FALSE
chr2	201774774	T	C	0.00017		.	FALSE	AluJr4	SINE,Alu
chr1	28825433	A	G	0.00019	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr6	160101723	T	C	0.00234	SOD2	-	TRUE	AluSz	SINE,Alu
chr2	87821033	C	A	0.00474		.	FALSE
chr5	93018884	A	C	0.00538	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr4	190878580	A	G	0.00052	FRG1	+	FALSE
chr1	52381354	G	T	0.00157	RAB3B	-	FALSE
chr2	38522141	G	T	0.00109	ATL2	-	FALSE
chr1	16768088	G	A	0.00063	NECAP2	+	FALSE
chr1	231398555	A	G	0.00401	GNPAT	+	FALSE
chr1	8938808	C	A	0.00030	ENO1	-	FALSE
chr2	86364710	T	C	0.00056	PTCD3	+	FALSE
chr15	49283066	T	G	0.00065	SECISBP2L	-	FALSE
chr1	1252349	A	G	0.00798	CPSF3L	-	FALSE	AluJr	SINE,Alu
chr1	1469546	G	A	0.00331	ATAD3A	+	FALSE
chr1	26774224	A	G	0.00295	DHDDS	+	TRUE	AluSz6	SINE,Alu
chr1	145688682	A	C	0.00468	NBPF20,NBPF10,RNF115	+	FALSE
chr8	56985607	C	T	0.00085	RPS20	-	FALSE
chr1	89447856	A	G	0.00218	KYAT3,RBMXL1	-	FALSE
chr1	1594977	T	C	0.00075	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	202696878	C	T	0.00159	KDM5B	-	FALSE
chr2	110842200	C	A	0.00131	MALL	-	FALSE
chr2	20401859	A	T	0.00930	SDC1	-	FALSE	(A)n	SINE,Alu
chr17	79674375	C	T	0.00129	MRPL12	+	FALSE
chr3	9833986	C	T	2.34147E-05	TADA3	-	FALSE
chr4	56236480	T	A	0.00967	SRD5A3,SRD5A3-AS1	+,-	FALSE
chr1	154557184	G	A	0.00558	ADAR	-	FALSE	A-rich	SINE,Alu
chr1	52253845	T	C	0.00889	OSBPL9	+	FALSE	(AT)n	SINE,Alu
chr3	15113799	T	C	0.00200	RBSN	-	TRUE	AluSz6	SINE,Alu
chr3	124948047	C	G	0.00285	ZNF148	-	FALSE
chr1	19542401	T	C	0.00052	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr5	180663941	G	T	0.00166	RACK1	-	FALSE
chr2	202031433	A	G	0.00611	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr11	67765170	G	T	0.00185	UNC93B1	-	FALSE
chr6	114182783	A	G	0.00442	MARCKS	+	FALSE
chr3	53260620	T	G	0.00069	TKT	-	FALSE
chr7	2290522	C	T	0.00517	NUDT1	+	FALSE
chr1	85785557	T	A	0.00141	DDAH1	-	FALSE
chr1	53288894	A	G	0.00066	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr19	11256672	T	C	9.28647E-11	SPC24	-	TRUE	AluJr4	SINE,Alu
chr1	28920925	A	G	0.00294	RAB42	+	TRUE	AluSx	SINE,Alu
chr1	228880466	G	A	0.00216	RHOU	+	FALSE
chr6	31324110	G	A	0.00521		.	FALSE
chr1	27101578	A	G	1.02706E-10	ARID1A	+	FALSE
chr1	145284883	A	G	0.00329	NBPF20,NOTCH2NL	+	FALSE	L2a	SINE,Alu
chr2	37331750	T	C	0.00067		.	FALSE	AluJb	SINE,Alu
chr1	36536016	G	A	8.76996E-09		.	FALSE
chr1	1570928	G	T	0.00173	CDK11B	-	FALSE
chr1	10520702	T	C	0.00438	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	17314702	C	T	0.00140	ATP13A2	-	FALSE
chr7	44800040	C	A	0.00565	ZMIZ2	+	FALSE
chr1	220232144	T	C	1.06602E-07	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	120694990	C	A	0.00325		.	FALSE	A-rich	SINE,Alu
chr2	128952699	A	G	0.00497	UGGT1	+	TRUE	AluSp	SINE,Alu
chr1	28662105	A	G	0.00846	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	10517352	T	C	0.00311		.	FALSE	AluJr	SINE,Alu
chr4	7765043	G	A	0.00071	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	6283305	T	C	0.00554	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	120021785	T	C	0.00751	STEAP3	+	FALSE
chr1	6683578	T	C	0.00151	PHF13	+	FALSE
chr2	128620438	C	A	0.00230	AMMECR1L	-	FALSE
chr1	121133998	T	A	0.00171	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	68943486	C	T	0.00079	DEPDC1	-	FALSE	(TTCTCTT)n	SINE,Alu
chr4	39528976	C	T	8.52335E-05	UGDH	-	FALSE
chr1	100489452	A	G	0.00741	SLC35A3	+	TRUE	AluSc	SINE,Alu
chr1	43391824	A	T	0.00552	SLC2A1	-	FALSE
chr1	144852476	T	C	0.00735	NBPF20,PDE4DIP	+,-	FALSE
chr19	53914807	A	G	4.44644E-06	ZNF765	+	TRUE	AluSp	SINE,Alu
chr4	88814756	C	T	0.00145		.	FALSE
chr3	50686350	T	G	2.12445E-05	MAPKAPK3	+	FALSE
chr1	1344749	A	G	0.00307		.	FALSE	AluSx1	SINE,Alu
chr1	6662500	C	G	0.00235	KLHL21	-	FALSE
chr1	1650787	T	C	0.00590	CDK11B,CDK11A	-	FALSE
chr2	39664278	C	A	0.00053	MAP4K3	-	FALSE	(CGC)n	SINE,Alu
chr1	26143725	A	T	0.00818	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	1337737	G	C	2.51903E-05	MRPL20	-	FALSE
chr1	567783	T	C	0.00817	MIR6723	-	FALSE
chr1	16932536	C	T	0.00114	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	109855150	A	C	0.00251	SORT1	-	FALSE	A-rich	SINE,Alu
chr1	33148284	A	G	0.00793	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr7	99917927	T	C	0.00320	SPDYE3	+	FALSE	AluJb	SINE,Alu
chr2	20401856	T	G	0.00265	SDC1	-	FALSE
chr1	89447839	C	G	3.35704E-05	KYAT3,RBMXL1	-	FALSE
chr1	19542301	T	C	0.00032	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr16	10625460	T	C	0.00015	EMP2	-	TRUE	AluSx	SINE,Alu
chr15	41590982	A	G	0.00327	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr2	37329300	T	C	0.00590		.	FALSE	AluJr4	SINE,Alu
chr1	117529752	C	A	0.00024	PTGFRN	+	FALSE
chr1	59142713	T	C	0.00246	MYSM1	-	FALSE
chr7	152551581	T	A	0.00313	ACTR3B	+	FALSE
chr1	27204516	T	C	0.00028		.	FALSE	AluSg7	SINE,Alu
chr1	900717	C	T	0.00661	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr8	48889823	C	A	0.00770	MCM4	+	FALSE	AluSx3	SINE,Alu
chr4	165998654	T	C	0.00953	TMEM192	-	TRUE	AluSg	SINE,Alu
chr1	46075171	A	C	0.00280	NASP	+	FALSE	A-rich	SINE,Alu
chr1	9161137	T	C	0.00087		.	FALSE	AluSx	SINE,Alu
chr2	71412707	G	A	0.00305	PAIP2B	-	FALSE	AluJr	SINE,Alu
chr10	1086804	T	A	0.00821	IDI2-AS1,IDI1	+,-	FALSE
chr5	180682612	A	T	0.00235	CTC-338M12.4	+	FALSE
chr3	66428450	G	A	0.00355	SLC25A26	+	FALSE
chr3	139076427	C	T	0.00014		.	FALSE
chr1	113243048	C	T	0.00023	MOV10	+	FALSE
chr3	43098969	T	G	0.00596	FAM198A	+	FALSE	L1ME3G	SINE,Alu
chr1	54493197	T	C	0.00064	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr2	118583874	C	G	0.00569	DDX18	+	FALSE
chr1	184762498	T	C	0.00834	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	85786299	T	A	0.00502	DDAH1	-	FALSE
chr1	33071159	A	G	0.00947	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr2	103333653	T	C	0.00426	MFSD9	-	FALSE	AluYm1	SINE,Alu
chr15	41591418	A	G	6.38388E-06	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr1	207221096	G	A	0.00452	YOD1	-	FALSE
chr2	202032107	A	G	0.00401	CFLAR	+	TRUE	AluJo	SINE,Alu
chr15	41590978	A	G	1.05775E-06	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	27204436	T	C	1.54117E-06		.	FALSE	AluSg7	SINE,Alu
chr1	54355105	A	G	0.00325	YIPF1	-	FALSE	MIRb	SINE,Alu
chrX	133930368	T	G	0.00126	FAM122B	-	FALSE	G-rich	SINE,Alu
chr4	39551087	T	C	0.00263	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr2	72968440	T	A	0.00138	EXOC6B	-	FALSE
chr5	139931633	C	A	0.00014	SRA1	-	FALSE
chr1	1255412	C	A	0.00751	CPSF3L	-	FALSE	(GCAGG)n	SINE,Alu
chr1	6582221	T	C	6.47537E-05	NOL9	-	TRUE	AluSq4	SINE,Alu
chr12	133298417	A	G	6.66134E-16	PGAM5	+	TRUE	AluSp	SINE,Alu
chr11	63394020	A	T	0.00175	ATL3	-	FALSE
chr7	38764395	T	C	0.00139	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	15844615	A	G	0.00792	CASP9	-	FALSE
chr1	6282401	T	C	0.00469	ICMT	-	TRUE	AluSz	SINE,Alu
chr4	107246251	G	T	3.16074E-09	AIMP1	+	FALSE
chr3	17201882	C	T	0.00259	TBC1D5	-	FALSE
chr1	53291420	A	G	0.00011	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr3	10192672	G	A	5.82875E-07	VHL	+	FALSE	AluSx1	SINE,Alu
chr6	42856118	A	G	0.00743	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	36067760	T	C	0.00362	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	37328082	T	C	1.18454E-08		.	FALSE
chr2	109301115	T	A	0.00150	LIMS1	+	FALSE
chr3	49053219	A	G	1.70535E-05	WDR6,DALRD3	+,-	FALSE
chr11	75116737	G	A	0.00774	RPS3	+	FALSE
chr2	174090928	G	C	0.00852	ZAK,MLK7-AS1	+,-	FALSE
chr2	128949342	A	G	0.00397	UGGT1	+	TRUE	AluSg	SINE,Alu
chr3	37031951	G	A	0.00154	EPM2AIP1	-	FALSE	(A)n	SINE,Alu
chr16	75479484	T	C	1.12347E-07	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	45975670	A	G	0.00530	MMACHC	+	TRUE	AluSx4	SINE,Alu

RBP	DDX24
Knock-Method	shRNA
RBP Family	DEAD
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR300IEW
Platform	HiSeq
Pubmed ID	32252787

DDX24 - Target Gene Network