RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	70904800	G	T	0.00772	CTH	+	FALSE
chr2	101622884	C	A	0.00387	RPL31	+	FALSE
chr1	14150032	C	T	0.00163	PRDM2	+	FALSE
chr7	128143932	A	G	0.00332		.	FALSE	AluSq2	SINE,Alu
chr5	41917694	T	C	0.00784	C5orf51	+	FALSE
chr1	6681836	G	A	5.48259E-05	PHF13	+	FALSE
chr5	137754695	T	C	0.00266	KDM3B	+	FALSE
chr7	44839297	A	T	0.00777	PPIA	+	FALSE
chr2	37330611	T	C	0.00835		.	FALSE	AluSq2	SINE,Alu
chr1	6283296	T	C	0.00122	ICMT	-	TRUE	AluSx3	SINE,Alu
chr3	101576175	T	C	0.00246	NFKBIZ	+	FALSE
chr2	129024188	T	G	0.00051	HS6ST1	-	FALSE
chr1	144922523	C	T	0.00566	NBPF20,PDE4DIP	+,-	FALSE
chr1	205056476	T	C	0.00096	RBBP5	-	FALSE	AluSx	SINE,Alu
chr6	114182783	A	G	0.00442	MARCKS	+	FALSE
chr1	47184539	C	T	0.00425	EFCAB14	-	FALSE
chr3	48786991	T	C	0.00584	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr5	151041886	T	G	0.00176	SPARC	-	FALSE
chr4	177251290	G	A	0.00580	SPCS3	+	FALSE
chr9	131457814	G	A	0.00021	SET	+	FALSE
chr1	1595048	T	C	0.00399	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	10520751	T	C	0.00495	DFFA	-	TRUE	AluSc8	SINE,Alu
chr3	24163645	C	G	1.00972E-05	THRB	-	FALSE
chr1	40537943	A	C	0.00115	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	210416438	C	A	0.00085	SERTAD4	+	FALSE
chr7	44841489	A	G	0.00015	PPIA	+	TRUE	AluJr	SINE,Alu
chr15	23282993	G	A	0.00337	HERC2P2	-	FALSE
chr2	200792052	G	A	0.00378	C2orf69	+	FALSE
chr1	25894462	A	G	0.00101	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	144595943	A	G	0.00050	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	206578650	G	C	0.00159	SRGAP2	+	FALSE
chr12	125269475	T	C	0.00184	SCARB1	-	FALSE
chr2	219523584	C	T	0.00299	ZNF142	-	FALSE
chr1	79109353	G	T	0.00214	IFI44L	+	FALSE	LTR26	SINE,Alu
chr3	182632684	G	A	0.00116	ATP11B	+	FALSE
chr1	36614708	C	T	0.00201	TRAPPC3	-	FALSE
chr4	104062223	C	T	0.00750	CENPE	-	FALSE
chr7	94297293	G	T	0.00573	PEG10	+	FALSE
chr5	43377390	T	C	0.00062	CCL28	-	TRUE	AluSz	SINE,Alu
chr2	91955209	G	A	6.38312E-06		.	FALSE
chr1	144909956	G	A	0.00310	NBPF20,PDE4DIP	+,-	FALSE
chr1	567191	C	T	0.00428		.	FALSE
chr1	16910172	G	A	0.00958	NBPF1	-	FALSE
chr8	128944719	A	T	0.00093	PVT1	+	FALSE
chr1	17394775	G	A	0.00103	PADI2	-	FALSE
chr1	24786	G	A	0.00285	WASH7P	-	FALSE
chr5	132203384	T	A	0.00651	UQCRQ	+	FALSE
chr2	75118737	C	T	0.00154	HK2	+	FALSE
chr1	1593750	A	G	0.00191	CDK11B,SLC35E2B	-	FALSE
chr1	19543456	T	C	0.00451	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	16892275	C	T	0.00087	NBPF1	-	FALSE
chr10	61548857	C	A	0.00046	CCDC6	-	FALSE
chr1	145509570	A	G	0.00028	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	44401225	T	C	0.00802	ARTN	+	FALSE
chr12	12618715	T	C	0.00714	BORCS5	+	FALSE
chr1	142803764	C	T	1.49403E-06		.	FALSE	MIRb	SINE,Alu
chr12	124146094	A	G	2.86040E-06	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr1	113243096	G	T	0.00114	MOV10	+	FALSE
chr18	33831189	C	A	0.00763	MOCOS	+	FALSE
chr1	16944809	G	C	9.47535E-05	CROCCP2	-	FALSE
chr3	194349178	C	T	0.00881	TMEM44	-	FALSE
chr14	63841402	A	C	0.00692	PPP2R5E	-	FALSE
chr19	13054924	A	C	0.00982	CALR	+	FALSE
chr8	140475147	C	T	0.00719		.	FALSE
chr20	25427885	A	G	0.00455	GINS1	+	TRUE	AluSz	SINE,Alu
chr3	195461650	A	G	0.00062		.	FALSE	AluSz	SINE,Alu
chr1	28826150	A	G	0.00052	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	8412652	A	C	0.00929	RERE	-	FALSE
chr22	18571345	A	G	0.00113	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	6651457	G	A	0.00614	KLHL21	-	FALSE
chr7	44918772	T	C	0.00026	PURB	-	FALSE	AluSg	SINE,Alu
chr15	102516561	T	C	0.00805	WASH3P	+	FALSE
chr3	40578843	A	G	0.00221	ZNF621	+	TRUE	AluJr	SINE,Alu
chr4	66439707	T	C	0.00148	EPHA5	-	FALSE
chr1	184761350	T	C	0.00754	FAM129A	-	TRUE	AluJo	SINE,Alu
chr1	201846675	C	T	0.00145	IPO9	+	FALSE
chr1	31838550	T	A	0.00595	FABP3	-	FALSE
chr1	33147934	A	G	0.00251	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr1	16889864	C	A	0.00020	NBPF1	-	FALSE
chr3	81698130	T	C	2.93981E-08	GBE1	-	FALSE
chr9	128001436	C	T	0.00052	HSPA5	-	FALSE
chr4	79832870	A	T	0.00655	BMP2K	+	FALSE
chr1	36322433	G	A	0.00663	AGO4	+	FALSE
chr10	1086804	T	A	0.00821	IDI2-AS1,IDI1	+,-	FALSE
chr2	204301753	T	A	0.00012	RAPH1	-	FALSE
chr1	10518875	T	C	0.00127		.	FALSE	AluSx1	SINE,Alu
chr10	22824828	A	T	0.00225	PIP4K2A	-	FALSE
chr5	184393	C	T	0.00228	PLEKHG4B	+	FALSE
chr5	43175369	G	T	7.56035E-05	ZNF131	+	FALSE
chr2	217366868	A	G	0.00100		.	FALSE	AluSz6	SINE,Alu
chr1	38174366	G	T	0.00879	CDCA8	+	FALSE
chr1	159946783	A	G	0.00097	LINC01133	+	FALSE	(GAAA)n	SINE,Alu
chr1	193054154	G	A	0.00757	TROVE2	+	FALSE
chr1	6585215	C	T	0.00286	NOL9	-	FALSE	FAM	SINE,Alu
chr1	145100851	A	G	0.00066	NBPF20,SEC22B	+	FALSE	AluSg4	SINE,Alu
chr3	122283291	C	A	0.00061	DTX3L,PARP9	+,-	FALSE
chr1	145689566	A	G	2.12475E-08	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr11	93474585	T	G	0.00531	TAF1D	-	FALSE
chr1	19282314	G	T	0.00158	IFFO2	-	FALSE
chr16	87864349	C	A	0.00981	SLC7A5	-	FALSE
chr1	143399333	T	A	0.00339		.	FALSE	L1MC4	SINE,Alu
chr7	44841239	T	A	0.00199	PPIA	+	FALSE
chr5	179382563	T	C	0.00704	RNF130	-	FALSE
chr1	46075171	A	C	0.00140	NASP	+	FALSE	A-rich	SINE,Alu
chr1	52381354	G	T	0.00157	RAB3B	-	FALSE
chr1	120455441	A	G	0.00872	NOTCH2	-	FALSE
chr12	1602602	A	G	8.31525E-05	ERC1	+	FALSE	AluSx	SINE,Alu
chr1	165877575	A	C	0.00675	UCK2	+	FALSE
chr1	59123655	C	T	0.00655	MYSM1	-	FALSE
chr1	95658346	T	A	0.00098	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr2	91805833	A	G	1.63980E-13		.	FALSE	MLT1H1	SINE,Alu
chr5	64023977	C	T	0.00340	SREK1IP1	-	FALSE	(TTTTTTT)n	SINE,Alu
chr1	145688664	A	T	0.00087	NBPF20,NBPF10,RNF115	+	FALSE
chr1	26144435	C	G	0.00129	SEPN1	+	FALSE
chr1	212515613	C	T	0.00286	PPP2R5A	+	FALSE
chr1	9353122	C	G	0.00562	SPSB1	+	FALSE	(GCG)n	SINE,Alu
chr2	103333656	T	A	0.00488	MFSD9	-	FALSE	AluYm1	SINE,Alu
chr15	41590291	A	C	0.00032	OIP5-AS1	+	FALSE
chr1	53288897	A	G	0.00299	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	52306079	T	A	0.00033	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr3	196670081	C	G	0.00500	NCBP2-AS2	+	FALSE
chr1	36392543	G	T	0.00971		.	FALSE	(T)n	SINE,Alu
chr1	3731965	G	A	0.00209	CEP104	-	FALSE
chr1	35817025	T	A	0.00987	ZMYM4	+	FALSE
chr1	38326700	T	C	5.61462E-05	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	220231254	T	C	0.00974	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	28836973	A	G	0.00017	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr4	39550084	T	C	2.47241E-05	UGDH-AS1,SMIM14	+,-	FALSE	FLAM_C	SINE,Alu
chr11	65179815	C	A	0.00447	FRMD8	+	FALSE
chr3	44790773	T	C	0.00122	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	27205359	T	C	0.00301		.	FALSE	AluSc	SINE,Alu
chr1	118167515	C	T	4.87028E-05	FAM46C	+	FALSE
chr5	167898510	C	G	0.00013	WWC1	+	FALSE
chr9	33624856	C	T	0.00823	ANXA2P2	+	FALSE
chr1	1419743	A	G	0.00848	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr8	12283473	C	T	0.00582	FAM86B2	-	FALSE
chr1	156084582	T	C	0.00195	LMNA	+	FALSE
chr22	18571457	A	G	0.00493	PEX26	+	TRUE	AluSz	SINE,Alu
chr2	11426734	T	C	4.76290E-06	ROCK2	-	FALSE
chr1	202993056	T	C	0.00046	TMEM183A	+	FALSE
chr1	113240711	G	A	0.00454	MOV10	+	FALSE
chr1	90401562	C	A	0.00057	LRRC8D	+	FALSE
chr12	1085978	T	A	0.00421	RAD52	-	FALSE	L2	SINE,Alu
chr17	28506279	G	A	0.00634	NSRP1	+	FALSE
chr19	17535871	A	C	0.00948	MVB12A	+	FALSE
chr7	105162562	G	C	0.00096	PUS7	-	FALSE
chr1	145513016	A	G	0.00400	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	16929279	G	A	0.00138	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	25890189	A	G	0.00961	LDLRAP1	+	FALSE
chr5	17276088	C	A	0.00171	BASP1	+	FALSE	(TC)n	SINE,Alu
chr1	46774813	C	G	0.00766	UQCRH	+	FALSE
chr1	144833382	C	T	0.00325	NBPF20	+	FALSE	L1MEc	SINE,Alu
chr8	30535975	T	C	5.05710E-05	GSR	-	TRUE	AluJr	SINE,Alu
chr1	32372358	C	T	0.00303	PTP4A2	-	FALSE	(CA)n	SINE,Alu
chr1	33149495	A	G	0.00421	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	1594835	C	G	0.00195	CDK11B,SLC35E2B	-	FALSE
chr1	22400707	C	G	0.00232	CDC42	+	FALSE	AluSc8	SINE,Alu
chr1	6282426	T	C	0.00513	ICMT	-	TRUE	AluSz	SINE,Alu
chr6	42857028	A	G	0.00064	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr3	141879765	T	C	0.00212	GK5	-	TRUE	AluJr	SINE,Alu
chr1	27204865	T	C	0.00042		.	FALSE	AluSx	SINE,Alu
chr1	78414329	G	A	0.00874	FUBP1	-	FALSE	A-rich	SINE,Alu
chr2	67631831	G	A	0.00423	ETAA1	+	FALSE
chr1	24798520	A	C	0.00110	NIPAL3	+	FALSE
chr6	36894340	A	G	0.00575	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr1	33145958	G	T	0.00080	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chr4	152025795	T	A	0.00516	RPS3A	+	FALSE
chr1	114940228	C	T	0.00127	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	16450928	T	C	0.00113	EPHA2	-	FALSE
chr1	9161011	T	C	0.00190		.	FALSE	AluJb	SINE,Alu
chr1	1344749	A	G	3.37361E-05		.	FALSE	AluSx1	SINE,Alu
chr1	36531781	G	A	0.00288		.	FALSE
chr2	24494671	T	C	0.00244	ITSN2	-	FALSE	(TATCCT)n	SINE,Alu
chr1	59122059	G	A	0.00476	MYSM1	-	FALSE
chr1	112266787	G	T	0.00873	FAM212B	-	FALSE
chr1	10519946	T	C	0.00080		.	FALSE	AluJr	SINE,Alu
chr1	16932428	C	G	0.00620	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr2	86249961	T	C	0.00292	LOC90784	-	TRUE	AluJr	SINE,Alu
chr12	56510708	A	G	0.00050	RPL41	+	FALSE
chr1	47905554	C	G	0.00297	FOXD2	+	FALSE
chr7	65618786	A	G	3.58027E-08	CRCP	+	TRUE	AluSx3	SINE,Alu
chr1	32799439	C	T	0.00239	MARCKSL1	-	FALSE
chr1	168220427	A	G	0.00670		.	FALSE	AluSz6	SINE,Alu
chr5	14510067	G	T	0.00130	TRIO	+	FALSE
chr1	144955288	A	G	0.00574	NBPF20,PDE4DIP	+,-	FALSE
chr1	204521159	A	G	0.00158	MDM4	+	TRUE	AluSp	SINE,Alu
chr1	145273345	T	C	0.00640	NBPF20,NOTCH2NL	+	FALSE
chr1	3806074	G	A	0.00809	C1orf174	-	FALSE	AluSp	SINE,Alu
chr1	880052	C	T	0.00231	NOC2L	-	FALSE
chr1	144931581	C	G	0.00292	NBPF20,PDE4DIP	+,-	FALSE
chr1	236717926	T	C	0.00029	HEATR1	-	FALSE
chr3	49395693	C	G	0.00243	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr5	34906692	T	C	0.00021	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	10520072	T	C	0.00226		.	FALSE	AluSx	SINE,Alu
chr1	28261657	C	T	0.00327	SMPDL3B	+	FALSE
chr2	50147865	T	A	0.00112	NRXN1	-	FALSE	(GT)n	SINE,Alu
chr12	125511226	A	G	0.00205	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	26608016	G	A	1.44245E-06		.	FALSE
chr2	24224134	A	G	0.00333		.	FALSE	AluSp	SINE,Alu
chr1	179042270	T	C	0.00044	FAM20B	+	FALSE
chr3	196293764	G	C	0.00392	WDR53	-	FALSE
chr1	10519932	T	C	5.00916E-05		.	FALSE	AluJr	SINE,Alu
chr1	36642328	C	T	0.00971	MAP7D1	+	FALSE	GA-rich	SINE,Alu
chr1	118502757	G	A	0.00793	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr3	10192642	A	G	0.00714	VHL	+	TRUE	AluSx1	SINE,Alu
chr7	44918768	T	C	3.66924E-05	PURB	-	TRUE	AluSg	SINE,Alu
chr1	184761312	T	C	0.00308	FAM129A	-	TRUE	AluJo	SINE,Alu
chr1	175161849	G	T	0.00030	KIAA0040	-	FALSE
chr1	16891340	T	A	0.00724	NBPF1	-	FALSE
chr17	36936846	C	T	0.00277	PIP4K2B	-	FALSE
chrM	2619	A	T	0.00012	RNR2	+	FALSE	LSU-rRNA_Hsa	SINE,Alu
chr2	113287424	T	A	0.00361	TTL	+	FALSE
chr2	101622881	C	A	1.48865E-05	RPL31	+	FALSE
chr1	9161218	T	C	0.00581		.	FALSE	AluSx	SINE,Alu
chr10	117823566	G	T	0.00433	GFRA1	-	FALSE	(ATC)n	SINE,Alu
chr1	150937963	A	G	0.00658	CERS2	-	FALSE	G-rich	SINE,Alu
chr1	27879798	A	G	0.00899	AHDC1	-	FALSE	MIRb	SINE,Alu
chr3	72424929	A	G	0.00988	RYBP	-	FALSE
chr12	69237534	A	G	0.00106	MDM2	+	TRUE
chr1	10519912	T	C	0.00737		.	FALSE	AluJr	SINE,Alu
chr2	202252539	G	A	0.00293	TRAK2	-	FALSE
chr1	93826775	T	C	0.00172	DR1	+	FALSE
chr4	71859287	C	G	0.00557	DCK	+	FALSE
chr1	1309464	C	T	1.11022E-16	AURKAIP1	-	FALSE
chr1	144596317	C	T	0.00020	NBPF20	+	FALSE	AluJb	SINE,Alu
chr3	160154971	T	C	0.00820	TRIM59	-	FALSE	AluJb	SINE,Alu
chr1	227211026	C	G	0.00373	CDC42BPA	-	FALSE
chr1	154323560	A	T	0.00013	ATP8B2	+	FALSE
chr3	191097966	T	C	1.34670E-13	CCDC50	+	FALSE
chr1	22109952	G	A	0.00889		.	FALSE
chr1	3545185	C	A	0.00347	TPRG1L	+	FALSE
chr7	64441627	G	A	0.00478	ZNF117	-	FALSE
chr1	9643155	A	G	0.00015		.	FALSE	AluSx	SINE,Alu
chr1	10438014	A	C	0.00046	KIF1B	+	FALSE
chr3	44790772	T	C	0.00024	KIAA1143	-	TRUE	AluY	SINE,Alu
chr3	15113799	T	C	0.00200	RBSN	-	TRUE	AluSz6	SINE,Alu
chr8	146200283	T	C	0.00082	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr1	144614842	C	G	0.00015	NBPF20	+	FALSE
chr2	227660628	T	G	0.00025	IRS1	-	FALSE
chr12	3150853	C	G	0.00158		.	FALSE	(CCTCCCTG)n	SINE,Alu
chr7	130629624	T	C	0.00568	LINC-PINT	-	TRUE
chr1	16534255	C	G	0.00980	ARHGEF19	-	FALSE
chr2	100897573	G	A	0.00231	LONRF2	-	FALSE
chr2	74333234	T	C	0.00270	TET3	+	FALSE
chr15	77403107	C	A	3.43068E-05	PEAK1	-	FALSE
chr1	36068210	T	C	0.00025	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	16717888	G	A	0.00118	SZRD1	+	FALSE
chr1	10520902	A	T	0.00032	DFFA	-	FALSE
chr17	4929863	A	G	0.00597	KIF1C	+	TRUE	AluJb	SINE,Alu
chr1	87573331	T	C	0.00699	HS2ST1	+	FALSE	(AT)n	SINE,Alu
chr2	72403387	C	A	0.00486	EXOC6B	-	FALSE
chr3	176739404	A	G	7.21134E-06	TBL1XR1	-	FALSE
chr1	38327700	T	C	0.00510	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr1	94995491	C	T	0.00036	F3	-	FALSE	AluSx	SINE,Alu
chr3	48787219	A	G	0.00024	PRKAR2A	-	FALSE
chr1	10520439	T	C	0.00293		.	FALSE	AluSx1	SINE,Alu
chr3	4403260	C	T	0.00603	SUMF1	-	FALSE
chr1	67874696	T	C	0.00420	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr6	31595882	C	A	0.00450		.	FALSE
chr1	148594563	G	T	0.00169	NBPF15	+	FALSE
chr2	202242616	G	A	0.00880	TRAK2	-	FALSE
chr1	10520045	T	C	0.00085		.	FALSE	AluSx	SINE,Alu
chr17	26672364	C	G	0.00645	TNFAIP1	+	FALSE
chr2	74381319	C	A	0.00912	MOB1A	-	FALSE	AluY	SINE,Alu
chr1	1431502	G	A	0.00127	ATAD3B	+	FALSE
chr1	145292925	C	T	0.00817	NBPF20	+	FALSE
chr1	145284132	G	A	0.00338	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr1	19543456	T	C	0.00386	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr17	74555106	T	C	0.00164	SNHG16	+	FALSE
chr1	179852074	T	C	0.00033	TOR1AIP1	+	FALSE
chr1	151288172	G	A	0.00312	PI4KB	-	FALSE
chr4	17803673	T	C	0.00206	DCAF16	-	TRUE	AluY	SINE,Alu
chr10	12292344	A	G	0.00434	CDC123	+	FALSE
chr1	58946773	C	T	0.00037	OMA1	-	FALSE
chr1	9331255	A	G	0.00992	H6PD	+	TRUE	AluSx	SINE,Alu
chr1	10519190	T	C	0.00971		.	FALSE	AluSx3	SINE,Alu
chr3	40503559	C	G	0.00018	RPL14	+	FALSE
chr4	153701130	C	T	2.11271E-05	ARFIP1	+	FALSE
chr1	33322929	T	G	0.00340	S100PBP	+	FALSE	AluSp	SINE,Alu
chr1	179989742	G	C	0.00019	CEP350	+	FALSE
chr3	28390351	A	G	1.14010E-06	AZI2	-	FALSE
chr14	76045220	T	C	0.00421	LOC102724153,FLVCR2	+,-	FALSE
chr17	49041732	T	C	0.00135	SPAG9	-	TRUE	AluSx	SINE,Alu
chr1	44818525	T	C	0.00235	ERI3	-	FALSE
chr1	19543247	T	C	4.83051E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	45244411	C	A	0.00656	RPS8	+	FALSE
chr1	10521238	T	C	0.00797	DFFA	-	TRUE	AluY	SINE,Alu
chr1	62673225	G	A	0.00039	L1TD1	+	FALSE	L1MEd	SINE,Alu
chr1	145512073	A	G	0.00285	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	10519947	T	C	0.00534		.	FALSE	AluJr	SINE,Alu
chr1	16889642	T	C	0.00017	NBPF1	-	TRUE
chr5	40715440	A	C	0.00646	TTC33	-	FALSE
chr8	87485483	G	C	0.00554	RMDN1	-	FALSE
chr8	22995145	T	C	3.53807E-06	TNFRSF10D	-	FALSE
chr2	17942775	T	A	0.00367	GEN1	+	FALSE
chr1	44088556	C	A	0.00260	PTPRF	+	FALSE	A-rich	SINE,Alu
chr8	117858601	T	A	0.00891	RAD21	-	FALSE
chr1	19810692	A	C	0.00069	CAPZB	-	FALSE
chr3	197024681	T	C	0.00018	DLG1	-	FALSE
chr19	46052996	T	C	2.38036E-05	OPA3	-	TRUE	AluSz6	SINE,Alu
chr1	206566948	G	A	0.00879	SRGAP2	+	FALSE
chr3	169808354	G	A	0.00015	PHC3	-	FALSE
chr1	145511988	A	G	0.00900	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	3597974	T	C	1.93309E-05	RNASEH1	-	FALSE
chr3	10028294	G	A	1.35555E-07	EMC3	-	FALSE
chr15	101845309	A	G	0.00689	PCSK6	-	FALSE
chr19	21474901	T	C	1.34658E-06	ZNF708	-	TRUE	AluSc	SINE,Alu
chr8	11701458	T	C	1.82355E-06	CTSB	-	TRUE	AluSx1	SINE,Alu
chr1	1595074	T	C	0.00296	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr14	105270483	G	T	7.92193E-06	ZBTB42	+	FALSE
chr14	67852040	A	G	4.57409E-05	EIF2S1	+	TRUE	AluJb	SINE,Alu
chr1	21795388	A	G	0.00732	NBPF3	+	FALSE
chr1	567783	T	C	0.00427	MIR6723	-	FALSE
chr7	135285707	G	A	0.00084	NUP205	+	FALSE
chr2	37331560	T	C	0.00040		.	FALSE	AluJb	SINE,Alu
chr15	65442476	T	C	0.00084	CLPX	-	TRUE	AluSg4	SINE,Alu
chr15	90819423	A	G	3.09408E-05		.	FALSE	AluSx	SINE,Alu
chr4	89180334	T	C	0.00224	PPM1K	-	TRUE	AluSx4	SINE,Alu
chr1	9162224	T	C	0.00124		.	FALSE	AluSx	SINE,Alu
chr2	32535797	A	G	0.00910		.	FALSE	AluJb	SINE,Alu
chrX	77083845	T	C	0.00102	MAGT1	-	TRUE	AluSz	SINE,Alu
chr17	4928967	T	G	0.00921	KIF1C	+	FALSE	AluY	SINE,Alu
chr16	10624967	T	C	0.00013	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	36067851	T	C	0.00269	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	19234103	G	A	0.00014	IFFO2	-	FALSE
chr1	67451521	A	T	0.00049	MIER1	+	FALSE
chr1	12677547	G	A	0.00543	DHRS3	-	FALSE	(A)n	SINE,Alu
chr3	56654600	C	G	0.00490	CCDC66,FAM208A	+,-	FALSE
chr5	180682610	T	C	0.00014	CTC-338M12.4	+	FALSE
chr2	37329300	T	C	0.00050		.	FALSE	AluJr4	SINE,Alu
chr1	117530213	G	T	0.00256	PTGFRN	+	FALSE
chr1	145369007	T	G	0.00703	NBPF20,NBPF10	+	FALSE
chr1	51873951	G	A	1.40484E-05	EPS15	-	FALSE
chr1	40539211	A	T	0.00105	PPT1	-	FALSE
chr4	120981118	T	A	0.00024	MAD2L1	-	FALSE
chr2	62095565	A	T	0.00355	CCT4	-	FALSE
chr1	1252654	A	G	0.00125	CPSF3L	-	FALSE	AluSp	SINE,Alu
chr2	37331555	T	C	0.00132		.	FALSE	AluJb	SINE,Alu
chr1	33148118	A	G	0.00374	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	59147926	T	C	0.00601	MYSM1	-	FALSE
chr7	158719116	A	G	0.00824	WDR60	+	FALSE
chr1	28661653	A	G	9.75782E-05	MED18	+	TRUE	AluSg	SINE,Alu
chr1	10517653	T	C	0.00475		.	FALSE	AluSx1	SINE,Alu
chr3	16357494	G	A	2.87472E-06	RFTN1	-	FALSE
chr10	61548859	A	C	0.00011	CCDC6	-	FALSE
chr1	3546269	C	A	0.00260	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr20	35520229	T	C	3.77169E-05	TLDC2,SAMHD1	+,-	FALSE	AluSx3	SINE,Alu
chr3	172224303	A	G	0.00524	TNFSF10	-	FALSE
chr6	29857113	C	A	0.00582		.	FALSE
chr1	46075604	A	G	0.00365	NASP	+	TRUE	AluSx4	SINE,Alu
chr2	37327590	T	C	0.00063		.	FALSE
chr2	105881486	A	G	0.00042	TGFBRAP1	-	FALSE
chr1	20976075	T	C	0.00135	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	10367424	G	A	0.00286	KIF1B	+	FALSE	AluSx	SINE,Alu
chr1	19542631	T	C	0.00198	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr2	38975953	T	A	0.00432	SRSF7	-	FALSE
chr1	109856378	C	A	0.00804	SORT1	-	FALSE
chr2	33812352	A	G	0.00223	FAM98A	-	FALSE
chr19	39433139	T	G	0.00235	FBXO17	-	FALSE	AluJb	SINE,Alu
chr16	81064492	A	G	0.00935	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	10517653	T	C	0.00228		.	FALSE	AluSx1	SINE,Alu
chr1	19542463	T	C	0.00182	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	76255228	G	A	0.00073	RABGGTB,SNORD45B	+	FALSE
chr19	39981168	A	G	0.00446	TIMM50	+	TRUE	AluJr	SINE,Alu
chr1	36024788	C	T	2.88658E-15	NCDN	+	FALSE
chr2	207942527	A	T	0.00107	KLF7	-	FALSE
chr1	201846630	C	A	0.00041	IPO9	+	FALSE	(CA)n	SINE,Alu
chr2	36704033	T	A	0.00012	CRIM1	+	FALSE
chr1	65692498	T	C	0.00356	AK4	+	FALSE	(T)n	SINE,Alu
chr19	50370106	T	G	0.00359	PNKP	-	FALSE
chr1	36067925	T	C	0.00103	PSMB2	-	TRUE	AluSz	SINE,Alu
chr7	17384440	A	G	0.00271	AHR	+	TRUE	AluSx	SINE,Alu
chr2	86364709	G	T	0.00237	PTCD3	+	FALSE
chr1	9162247	T	C	0.00549		.	FALSE	AluSx	SINE,Alu
chr2	28002599	T	A	0.00566	MRPL33	+	FALSE
chr1	114306563	T	A	0.00191	RSBN1	-	FALSE
chr1	20826781	C	T	9.86003E-06	MUL1	-	FALSE
chr1	143135063	C	A	0.00397	LOC102723769	-	FALSE
chr1	16892135	G	A	0.00182	NBPF1	-	FALSE
chr12	27953267	T	G	0.00233	KLHL42	+	FALSE
chr2	202028727	A	G	0.00833	CFLAR	+	TRUE	AluSx1	SINE,Alu
chr1	117648269	G	A	0.00988		.	FALSE	AluSz6	SINE,Alu
chr3	14526649	T	G	0.00260	SLC6A6	+	FALSE
chr15	41591418	A	G	6.38388E-06	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr19	13883548	A	G	0.00566	MRI1	+	TRUE	AluYk3	SINE,Alu
chr1	7737791	A	C	0.00017	CAMTA1	+	FALSE
chr1	214524496	T	C	0.00879	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	3546128	A	G	0.00213	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr1	172547465	A	G	0.00725	SUCO	+	FALSE
chr2	206988452	A	T	0.00669	NDUFS1	-	FALSE
chr1	16932809	C	T	0.00887	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	10520383	T	C	0.00401		.	FALSE	AluSx1	SINE,Alu
chr17	65334802	T	C	1.10547E-05	PSMD12	-	TRUE	AluSq	SINE,Alu

RBP	DDX1
Knock-Method	shRNA
RBP Family	DEAD
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR208GPE
Platform	HiSeq
Pubmed ID	32252787

DDX1 - Target Gene Network