RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	32697110	A	T	5.19592E-06	EIF3I	+	FALSE	AluSp	SINE,Alu
chr1	16932536	C	T	0.00114	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	118502731	T	G	0.00155	WDR3,SPAG17	+,-	FALSE
chr1	159946750	G	A	0.00105	LINC01133	+	FALSE	(GAAA)n	SINE,Alu
chr1	115248084	C	T	0.00171	NRAS	-	FALSE
chr1	1309885	A	G	0.00010	AURKAIP1	-	FALSE
chr21	37789499	A	G	0.00889		.	FALSE	AluJb	SINE,Alu
chr9	131457039	C	T	0.00148	SET	+	FALSE
chr1	53366576	A	G	0.00484	ECHDC2	-	FALSE	AluJb	SINE,Alu
chr4	17488244	G	A	0.00030	QDPR	-	FALSE
chr1	67874731	T	C	0.00817	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr2	99812988	A	G	0.00700	MRPL30	+	TRUE	AluJb	SINE,Alu
chr5	137754695	T	C	0.00266	KDM3B	+	FALSE
chr1	36068275	T	C	0.00625	PSMB2	-	TRUE	AluSc	SINE,Alu
chr19	53997266	A	G	0.00173	ZNF813	+	FALSE	L1M3	SINE,Alu
chr1	154438084	C	T	0.00561	IL6R	+	FALSE
chr6	44417136	A	G	0.00644	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr19	13054905	T	C	0.00324	CALR	+	FALSE	(T)n	SINE,Alu
chr1	25570565	G	A	0.00244	RSRP1	-	FALSE	Alu	SINE,Alu
chr1	10520296	T	C	0.00108		.	FALSE	AluSx	SINE,Alu
chr2	175711942	C	T	8.43847E-05	CHN1	-	FALSE
chr17	57279167	A	G	0.00071	PRR11	+	TRUE	AluSq2	SINE,Alu
chr12	48539888	C	A	0.00088	PFKM	+	FALSE
chr10	101992783	T	C	0.00313	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr3	148748197	T	A	0.00026	HLTF	-	FALSE
chr1	180897569	C	T	0.00960	KIAA1614	+	FALSE
chr1	40537923	G	A	0.00609	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	86049364	A	G	0.00207	CYR61	+	FALSE
chr1	93803490	T	C	0.00572	CCDC18-AS1	-	FALSE	AluJr	SINE,Alu
chr1	154987526	C	T	0.00218	ZBTB7B	+	FALSE
chr6	33268621	T	C	0.00367		.	FALSE	AluY	SINE,Alu
chr1	78483452	C	T	0.00045	DNAJB4	+	FALSE	L1MB7	SINE,Alu
chr1	40539202	G	A	0.00966	PPT1	-	FALSE
chr1	144816555	C	T	0.00530	NBPF20,NBPF9	+	FALSE
chr1	9161550	G	A	0.00196		.	FALSE
chr2	29023124	G	T	0.00477	PPP1CB	+	FALSE
chr3	44839350	A	C	0.00837	KIF15	+	FALSE
chr1	28261654	T	G	0.00574	SMPDL3B	+	FALSE
chr6	41567394	T	A	0.00717	FOXP4	+	FALSE
chr1	55060362	G	A	0.00246	ACOT11	+	FALSE
chr1	19543352	T	C	0.00279	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr7	100957851	T	C	0.00028	LOC101927746,IFT22	+,-	FALSE	MADE1	SINE,Alu
chr6	43582795	A	G	0.00087	POLH	+	TRUE	AluSx1	SINE,Alu
chr1	36067925	T	C	1.59250E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	19234103	G	A	0.00014	IFFO2	-	FALSE
chr1	143189473	C	A	0.00572	LOC102723769	-	FALSE
chr3	16357708	A	G	0.00098	RFTN1	-	FALSE
chr1	145689491	A	G	0.00701	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	10518797	T	C	0.00510		.	FALSE	AluSx1	SINE,Alu
chr3	15113657	T	C	2.06253E-05	RBSN	-	TRUE	AluSz6	SINE,Alu
chr11	94801633	A	T	0.00808	SRSF8	+	FALSE
chr1	35647099	A	G	0.00092	SFPQ	-	FALSE
chr7	143003517	T	A	0.00251	CASP2	+	FALSE	AluY	SINE,Alu
chr2	202242616	G	A	0.00880	TRAK2	-	FALSE
chr2	208619675	A	G	0.00012	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr1	1246978	A	T	0.00760	PUSL1,CPSF3L	+,-	FALSE
chr1	165728775	C	T	5.75449E-06	TMCO1	-	FALSE
chr1	171486912	G	A	0.00866	PRRC2C	+	FALSE
chr1	11187199	G	T	0.00047	MTOR	-	FALSE
chr1	205111761	A	C	0.00497	DSTYK	-	FALSE
chr1	33149414	A	G	0.00990	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	212534448	T	C	0.00926	PPP2R5A	+	FALSE
chr5	41917696	T	A	0.00045	C5orf51	+	FALSE
chr3	44791062	T	C	0.00124	KIAA1143	-	FALSE
chr1	67874731	T	C	0.00613	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr12	98943192	A	G	0.00011	TMPO	+	FALSE	AluSz	SINE,Alu
chr5	178224547	A	G	0.00064	AACSP1	-	FALSE
chr1	204189357	C	T	0.00835	PLEKHA6	-	FALSE
chr1	33149256	A	G	0.00010	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr10	22824829	T	C	0.00207	PIP4K2A	-	FALSE
chr1	225974592	T	G	2.09928E-05	SRP9	+	FALSE	AluJr	SINE,Alu
chr1	206566195	C	T	0.00706	SRGAP2	+	FALSE
chr1	36067760	T	C	0.00044	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	17199207	T	A	0.00075	TBC1D5	-	FALSE	A-rich	SINE,Alu
chr1	172411768	T	C	0.00416	C1orf105,PIGC	+,-	FALSE
chr5	43609343	C	T	0.00556	NNT	+	FALSE
chr1	21808159	G	A	0.00011	NBPF3	+	FALSE
chr16	10625108	T	C	7.88488E-10	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	154323560	A	T	0.00013	ATP8B2	+	FALSE
chr1	33219771	G	C	0.00256	KIAA1522	+	FALSE
chr3	45722047	A	G	0.00319	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr16	67715404	T	C	0.00102	GFOD2	-	TRUE	AluSz	SINE,Alu
chr7	299940	G	A	8.49279E-08	FAM20C	+	FALSE
chr2	206982257	T	C	0.00023		.	FALSE	AluSg7	SINE,Alu
chr8	23294732	C	T	0.00415	ENTPD4	-	FALSE
chr1	32661578	C	T	0.00623	TXLNA	+	FALSE	(T)n	SINE,Alu
chr1	2303108	T	C	5.78895E-05	MORN1	-	FALSE	AluSp	SINE,Alu
chr19	16663345	T	C	0.00304	SLC35E1	-	TRUE	AluSg	SINE,Alu
chr1	204525548	A	G	0.00027	MDM4	+	TRUE	AluSz	SINE,Alu
chr4	2940165	T	C	0.00201	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr8	27661037	A	T	0.00314	ESCO2	+	FALSE	A-rich	SINE,Alu
chr7	128142691	A	G	0.00017	METTL2B	+	TRUE	AluSx1	SINE,Alu
chr5	70503890	A	T	0.00188		.	FALSE
chr1	36068369	T	C	5.31121E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	10290513	C	A	0.00577	TATDN2	+	FALSE
chr1	28861636	G	A	0.00754	RCC1	+	FALSE	(GCATGT)n	SINE,Alu
chr2	238005476	C	T	0.00456	COPS8	+	FALSE
chr5	176863519	G	C	0.00567	GRK6	+	FALSE
chr11	63394018	C	A	0.00103	ATL3	-	FALSE
chr1	182543666	T	G	0.00124	RNASEL	-	FALSE
chr2	105963597	C	T	0.00898	C2orf49	+	FALSE
chr4	17803568	T	C	0.00044	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	2241376	C	T	0.01000	SKI	+	FALSE
chr1	14113455	G	A	0.00647	PRDM2	+	FALSE
chr18	7012123	A	G	0.00065	LAMA1	-	FALSE
chr1	33150642	A	G	0.00316	SYNC,RBBP4	+,-	FALSE	AluJo	SINE,Alu
chr3	33187831	C	T	6.36740E-05	CRTAP	+	FALSE
chr16	57505635	G	T	0.00974	POLR2C	+	FALSE
chr2	206986314	T	C	0.00936		.	FALSE	AluSz	SINE,Alu
chr1	168220529	A	G	0.00161		.	FALSE	AluSz6	SINE,Alu
chr9	21331119	C	T	0.00343	KLHL9	-	FALSE	L1M	SINE,Alu
chr1	40537944	C	A	0.00506	CAP1	+	FALSE
chr1	9324213	C	T	0.00063	H6PD	+	FALSE
chr1	145281633	C	A	0.00022	NBPF20,NOTCH2NL	+	FALSE
chr1	146374185	C	G	0.00376	NBPF20,NBPF10,NBPF25P,NBPF12	+	FALSE
chr1	154989595	T	C	0.00264	ZBTB7B	+	FALSE
chr1	9642827	G	A	0.00985	SLC25A33	+	FALSE
chr4	120979130	T	C	0.00729		.	FALSE	AluSg4	SINE,Alu
chr1	27202981	T	C	0.00660		.	FALSE	AluSq2	SINE,Alu
chr2	73460316	G	T	0.00368	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr1	9162224	T	C	0.00523		.	FALSE	AluSx	SINE,Alu
chr2	55255313	T	A	0.00675	RTN4	-	FALSE
chr1	35319119	A	T	0.00111	SMIM12	-	FALSE	L1ME4c	SINE,Alu
chr2	190617700	T	C	1.38394E-05	OSGEPL1	-	FALSE
chr8	104082307	C	T	0.00675	ATP6V1C1	+	FALSE	L1ME3G	SINE,Alu
chr1	33147915	A	G	6.77632E-09	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr1	165877666	T	C	0.00189	UCK2	+	FALSE	(T)n	SINE,Alu
chr1	10520532	T	C	0.00150		.	FALSE	AluSx1	SINE,Alu
chr7	127947979	T	C	0.00257		.	FALSE	AluJr	SINE,Alu
chr1	10520819	T	C	0.00022	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	25894467	A	T	0.00136	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr2	112252626	A	C	0.00048	MIR4435-2HG	-	FALSE
chr8	48890293	A	G	0.00125	MCM4	+	TRUE	AluJb	SINE,Alu
chr2	25962254	A	T	0.00375	ASXL2	-	FALSE
chr1	6582221	T	C	0.00879	NOL9	-	TRUE	AluSq4	SINE,Alu
chr20	18468339	T	C	0.00062	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr6	150046734	T	C	0.00248	NUP43	-	FALSE
chr1	54692341	T	C	0.00027	SSBP3	-	FALSE	(T)n	SINE,Alu
chr6	41888827	C	G	0.00936	MED20	-	FALSE
chr1	210025751	G	A	4.42687E-05	DIEXF	+	FALSE	Tigger4a	SINE,Alu
chr4	2940347	T	C	1.36349E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr3	17202334	A	C	0.00770	TBC1D5	-	FALSE
chr17	5336210	T	C	0.00868	RPAIN,C1QBP	+,-	FALSE
chr3	15113694	T	C	0.00622	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	28835934	A	G	0.00596	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	1469546	G	A	0.00300	ATAD3A	+	FALSE
chr21	46353985	A	G	0.00985	LINC01547	-	FALSE	MER5A	SINE,Alu
chr17	57279282	A	G	7.34157E-06	PRR11	+	TRUE	AluSq2	SINE,Alu
chr5	156904831	T	C	0.00351	ADAM19	-	TRUE	MER92B	SINE,Alu
chr19	53571306	T	C	0.00481	ZNF160	-	FALSE
chr5	56177848	T	A	0.00986	MAP3K1	+	FALSE
chr1	111969752	A	G	0.00531	OVGP1	-	FALSE
chr1	24785393	C	T	0.00837	NIPAL3	+	FALSE
chr1	6282401	T	C	0.00806	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	55541174	A	G	0.00038	USP24	-	FALSE
chr4	57327022	A	G	0.00057	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	52306066	T	A	0.00154	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr5	180682610	T	C	0.00014	CTC-338M12.4	+	FALSE
chr3	15113733	T	C	0.00228	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	9161366	T	C	0.00189		.	FALSE	AluSx	SINE,Alu
chr1	38326661	T	C	0.00023	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	173457017	C	T	0.00036	PRDX6	+	FALSE
chr1	149913726	T	C	8.62683E-05	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr1	118066724	A	T	0.00979	MAN1A2	+	FALSE
chr3	58112440	A	G	8.00661E-07	FLNB	+	FALSE
chr2	3193040	G	A	0.00650	TSSC1	-	FALSE
chr1	43394612	T	C	0.00154	SLC2A1	-	FALSE
chr1	19943823	C	A	0.00752	MINOS1,MINOS1-NBL1	+	FALSE
chr1	89237556	C	T	0.00840	PKN2	+	FALSE
chr1	115299504	G	T	0.00067	CSDE1	-	FALSE
chr1	179814457	A	C	0.00152	TOR1AIP2	-	FALSE
chr2	85776590	T	C	0.00950	GGCX	-	TRUE	AluSz6	SINE,Alu
chr1	100203693	G	A	0.00142	FRRS1	-	FALSE
chr1	31905906	T	A	0.00092	SERINC2	+	FALSE
chr5	149823799	A	T	0.00672	RPS14	-	FALSE
chr3	167727417	C	T	2.31470E-08	GOLIM4	-	FALSE
chr1	19543457	T	C	0.00012	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	237035915	C	G	0.00348	AGAP1	+	FALSE
chr3	49394834	G	A	0.00000	GPX1	-	FALSE
chr1	36534934	A	G	0.00464		.	FALSE	AluJo	SINE,Alu
chrX	73421652	T	C	0.00436	FTX	-	TRUE	L1MB7	SINE,Alu
chr6	42856905	A	G	4.80826E-12	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	25889571	G	A	0.00344	LDLRAP1	+	FALSE
chr16	81064629	A	G	6.04166E-07	CENPN	+	TRUE	AluSg	SINE,Alu
chr3	49763338	T	C	2.41941E-06	IP6K1	-	FALSE
chr12	56532056	G	C	0.00743	ESYT1	+	FALSE
chr3	16301791	G	A	4.37274E-05	DPH3	-	FALSE
chr1	120458004	A	T	0.00247	NOTCH2	-	FALSE
chr16	84778690	C	T	0.00799	USP10	+	FALSE
chr1	46828734	T	C	0.00604	NSUN4	+	FALSE
chr1	41972198	A	T	0.00276	HIVEP3	-	FALSE
chr1	28825419	A	G	0.00204	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr3	126752934	T	C	0.00038	PLXNA1	+	FALSE
chr1	144014068	T	C	0.00029		.	FALSE
chr1	226333558	A	C	0.00052	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr2	102484490	G	T	0.00635	MAP4K4	+	FALSE
chr1	36068364	T	C	9.25575E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr16	1727060	G	A	0.00922	CRAMP1	+	FALSE
chr1	53365235	G	C	0.00029	ECHDC2	-	FALSE
chr1	40974799	T	C	0.00038	EXO5	+	FALSE
chr1	156613517	C	A	0.00011	BCAN	+	FALSE
chr1	10517653	T	C	0.00776		.	FALSE	AluSx1	SINE,Alu
chr1	16954981	C	A	0.00876	CROCCP2	-	FALSE
chr1	6282236	T	C	0.00388	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	6704635	A	G	0.00978	DNAJC11	-	FALSE
chr3	195243002	C	A	0.00358	PPP1R2	-	FALSE
chr1	161559407	A	G	0.00376	FCGR2C	+	FALSE
chr1	168218522	A	G	9.71811E-05		.	FALSE	AluSz	SINE,Alu
chr1	144594170	C	T	0.00636	NBPF20	+	FALSE
chr1	134370	T	C	0.00327		.	FALSE	AluSg	SINE,Alu
chr1	9644847	A	G	0.00672		.	FALSE	AluJr	SINE,Alu
chr5	135513089	T	A	7.47633E-06	SMAD5	+	FALSE
chr1	36794266	A	G	0.00141		.	FALSE	AluJb	SINE,Alu
chr15	41593352	A	G	0.00083		.	FALSE	AluSz6	SINE,Alu
chr3	10193475	A	G	0.00110	VHL	+	TRUE	AluJr	SINE,Alu
chr8	11701343	T	C	0.00280	CTSB	-	TRUE	AluSx1	SINE,Alu
chr19	19792288	A	G	0.00379	ZNF101	+	TRUE	AluJb	SINE,Alu
chr1	224380498	A	G	6.58460E-05	DEGS1	+	TRUE	AluSx	SINE,Alu
chr3	49395694	T	C	0.00074	GPX1	-	FALSE
chr19	19791273	A	G	0.00121	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr3	196660344	T	A	0.00022	SENP5	+	FALSE
chr10	13234356	A	T	3.19668E-07	MCM10	+	FALSE
chr2	31611143	C	T	0.00117	XDH	-	FALSE
chr1	33071159	A	G	0.00947	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr2	206983087	T	C	0.00364		.	FALSE	AluJb	SINE,Alu
chr2	204162597	A	G	0.00296	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr1	9161245	T	C	0.00429		.	FALSE	AluSx	SINE,Alu
chr2	43625184	T	A	0.00587	THADA	-	FALSE
chr1	40214261	A	G	0.00879	PPIE	+	TRUE	AluSq2	SINE,Alu
chr2	37331855	C	T	0.00965		.	FALSE	L1MC4	SINE,Alu
chrX	24095066	G	T	0.00603	EIF2S3	+	FALSE
chr1	10520672	T	C	0.00222	DFFA	-	TRUE	AluSc8	SINE,Alu
chr3	49395695	A	C	0.00159	GPX1	-	FALSE
chr1	85785548	C	T	0.00220	DDAH1	-	FALSE
chr1	200375837	T	G	0.00429	ZNF281	-	FALSE	(T)n	SINE,Alu
chr1	1431502	G	A	0.00127	ATAD3B	+	FALSE
chr1	67874697	T	C	0.00010	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	26755643	A	G	0.00955	LIN28A	+	FALSE	AluSc	SINE,Alu
chr7	4809333	A	G	0.00067	FOXK1	+	TRUE	AluSx1	SINE,Alu
chr1	27731933	C	A	1.77427E-09	WASF2	-	FALSE
chr2	98388811	C	G	0.00123	TMEM131	-	FALSE
chr3	45722253	A	G	0.00670	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	32373837	G	T	0.00068	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr14	53243545	T	C	3.01634E-08	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr4	57326291	A	G	0.00279	PAICS	+	TRUE	AluJr	SINE,Alu
chr3	73024350	C	A	0.00109	GXYLT2	+	FALSE
chr1	39990456	G	A	0.00749	BMP8A,PPIEL	+,-	FALSE	L2b	SINE,Alu
chrX	77083617	T	C	3.46806E-05	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	145513016	A	G	0.00400	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	153917621	G	C	0.00020	DENND4B	-	FALSE
chr2	232319529	T	A	1.32288E-06	NCL	-	FALSE
chr2	85772406	G	A	0.00278	GGCX	-	FALSE
chr1	244571947	C	T	0.00775	ADSS	-	FALSE
chr3	58308214	G	A	0.00113		.	FALSE	LTR49	SINE,Alu
chr1	90478690	A	C	0.00035	ZNF326	+	FALSE
chr2	11323276	T	C	0.00219	ROCK2	-	FALSE
chr4	2940358	G	A	2.85215E-10	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr4	761850	T	C	0.00026	PCGF3	+	FALSE
chr19	63697	G	A	0.00742	WASH5P	-	FALSE
chr7	38764332	T	C	0.00209	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	1653046	T	A	0.00686	CDK11B,CDK11A	-	FALSE
chr1	154455949	T	C	0.00416	SHE	-	FALSE
chr1	16890607	G	A	0.00869	NBPF1	-	FALSE
chr2	3592674	C	A	0.00011	RNASEH1	-	FALSE
chr3	191116133	C	T	0.00032	CCDC50	+	FALSE
chr1	120694990	C	A	0.00325		.	FALSE	A-rich	SINE,Alu
chr1	152552285	C	A	0.00400	LCE3D	-	FALSE
chr4	13602231	G	A	0.00646	BOD1L1	-	FALSE
chr1	40537941	A	C	0.00216	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	949608	G	A	0.00435	ISG15	+	FALSE
chr1	28826150	A	G	0.00048	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	209605643	A	C	0.00590	MIR205HG	+	FALSE	(AGC)n	SINE,Alu
chr1	54493259	T	C	0.00203	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr5	56177851	A	T	0.00796	MAP3K1	+	FALSE	(CAA)n	SINE,Alu
chr2	113509977	C	T	0.00197	CKAP2L	-	FALSE
chr12	133298417	A	G	0.00084	PGAM5	+	TRUE	AluSp	SINE,Alu
chrX	77083614	T	C	6.82446E-05	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	39471000	G	A	0.00518	AKIRIN1	+	FALSE
chr1	23408939	T	A	1.04314E-06	KDM1A	+	FALSE
chr5	134236206	A	G	0.00065	TXNDC15	+	TRUE	AluSq	SINE,Alu
chr7	6063283	C	T	0.00032	AIMP2,EIF2AK1	+,-	FALSE
chr1	181058313	G	A	0.00651	IER5	+	FALSE
chr2	85132777	T	C	1.13350E-06	TMSB10	+	FALSE
chr8	71550832	T	C	0.00725	LACTB2-AS1,LACTB2	+,-	FALSE
chr1	1419130	A	G	0.00685	ATAD3B	+	FALSE	AluSz	SINE,Alu
chr1	143189076	G	A	0.00048	LOC102723769	-	FALSE
chr1	23636275	G	T	0.00258	HNRNPR	-	FALSE
chr3	141667690	T	C	0.00018	TFDP2	-	TRUE	AluY	SINE,Alu
chr19	36260451	A	G	0.00854		.	FALSE	AluY	SINE,Alu
chr2	20401856	T	G	0.00265	SDC1	-	FALSE
chr1	36534830	A	G	0.00470		.	FALSE	AluJo	SINE,Alu
chr1	36531942	A	G	0.00042		.	FALSE	AluSq2	SINE,Alu
chr2	32534897	A	G	0.00111		.	FALSE	AluSx1	SINE,Alu
chr8	12286546	A	G	0.00400	FAM86B2	-	FALSE
chr1	146400122	C	G	0.00190	NBPF20,NBPF10,NBPF25P,NBPF12	+	FALSE
chr5	96368471	G	T	3.92809E-06		.	FALSE
chr7	44917291	T	C	0.00019	PURB	-	TRUE	AluSz	SINE,Alu
chr1	46774783	A	G	0.00163	UQCRH	+	FALSE	(AGG)n	SINE,Alu
chr1	161930908	G	A	0.00664	ATF6	+	FALSE
chr6	83921257	G	T	0.00876	ME1	-	FALSE
chr15	41591418	A	G	6.38388E-06	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr5	139931634	T	G	6.28154E-05	SRA1	-	FALSE
chr5	149829075	A	G	0.00277	RPS14	-	FALSE
chr1	6282400	T	C	0.00321	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	10518052	T	C	0.00179		.	FALSE	AluJr	SINE,Alu
chr2	167168093	C	T	0.00789	SCN9A	-	FALSE
chr7	99017241	C	A	0.00721	PTCD1,ATP5J2-PTCD1	-	FALSE
chr1	53288894	A	G	0.00066	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr6	109786003	T	C	0.00245	MICAL1,ZBTB24	-	TRUE	AluJr	SINE,Alu
chr1	46076543	A	G	0.00989	NASP	+	TRUE	AluSx	SINE,Alu
chrX	152916230	A	C	1.62471E-05	DUSP9	+	FALSE
chr1	16889566	T	C	0.00436	NBPF1	-	TRUE
chr1	47840953	A	G	0.00404	CMPK1	+	FALSE
chr5	130540369	C	A	0.00126	LYRM7	+	FALSE	Tigger4a	SINE,Alu
chr1	4834606	T	C	0.00647	AJAP1	+	FALSE
chr1	20976075	T	C	0.00135	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr12	133298025	A	G	6.18330E-06	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	19542250	T	C	9.94571E-09	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	10193732	A	G	0.00472	VHL	+	TRUE	AluJr	SINE,Alu
chr1	118502684	G	A	0.00682	WDR3,SPAG17	+,-	FALSE
chr1	36068370	T	C	3.60077E-09	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	52306082	A	T	0.00038	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr14	62213926	T	C	0.00226	HIF1A,HIF1A-AS2	+,-	FALSE
chr1	36752811	C	T	2.19602E-12	THRAP3	+	FALSE
chr19	19793709	A	G	0.00700	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr1	28825331	A	G	0.00051	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr12	98943187	A	G	2.29648E-09	TMPO	+	TRUE	AluSz	SINE,Alu
chr4	13604034	T	C	3.45500E-11	BOD1L1	-	FALSE
chr17	43248581	C	T	0.00012	LOC105371795	-	FALSE
chr3	48787108	T	C	0.00291	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	9326888	T	C	0.00887	H6PD	+	FALSE	AluSx1	SINE,Alu
chr1	109737090	G	A	0.00173	KIAA1324	+	FALSE
chr2	37328008	T	C	0.00733		.	FALSE
chr1	16889127	A	G	0.00213	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr1	19198414	G	A	0.00028	ALDH4A1	-	FALSE
chr1	160967833	T	C	6.62581E-12	F11R	-	TRUE	AluSp	SINE,Alu

RBP	SF3B4
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR148MQK
Platform	HiSeq
Pubmed ID	32252787

SF3B4 - Target Gene Network