RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	16933628	A	G	0.00430	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	145512059	A	G	0.00053	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	101893247	C	A	0.00237	RNF149	-	FALSE	(A)n	SINE,Alu
chr3	99463810	G	T	0.00496	MIR548G,COL8A1	+,-	FALSE
chr1	206516261	C	T	0.00020	SRGAP2	+	FALSE
chr1	46751578	T	G	0.00380	LRRC41	-	FALSE
chr1	109746728	A	G	0.00171	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr19	11560461	A	G	0.00034	PRKCSH	+	TRUE	AluSx	SINE,Alu
chr8	91637754	A	T	0.00297	TMEM64	-	FALSE
chr1	53684924	A	G	0.00347	C1orf123	-	FALSE	L1MA5A	SINE,Alu
chr1	203713133	G	A	0.00984	ATP2B4	+	FALSE
chr2	7036682	A	T	0.00335	RSAD2	+	FALSE
chr14	90509564	C	T	0.00552	TDP1	+	FALSE
chr2	55516897	A	G	1.06852E-06	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	145512098	A	G	0.00707	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	100489619	A	G	0.00319	SLC35A3	+	TRUE
chr1	38155698	G	T	0.00368	C1orf109	-	FALSE	AluSx1	SINE,Alu
chr1	19578192	G	A	0.00778	MRTO4	+	FALSE
chr3	150261569	T	G	0.00173	SERP1	-	FALSE
chr13	20246634	T	G	0.00071	MPHOSPH8	+	FALSE
chr1	160967848	T	C	0.00200	F11R	-	TRUE	AluSp	SINE,Alu
chr1	11347152	A	T	0.00401	UBIAD1	+	FALSE
chr1	10518875	T	C	0.00127		.	FALSE	AluSx1	SINE,Alu
chr16	10623631	T	C	1.36144E-05	EMP2	-	TRUE	AluSp	SINE,Alu
chr12	98942885	A	G	1.31269E-05	TMPO	+	TRUE	AluSc	SINE,Alu
chr9	80888613	A	G	0.00904		.	FALSE	AluSx	SINE,Alu
chr1	109242607	G	A	0.00652	PRPF38B	+	FALSE
chr1	45452227	G	C	0.00256	EIF2B3	-	FALSE
chr1	120163247	T	C	0.00365	ZNF697	-	FALSE
chr11	76733946	A	G	0.00725	ACER3	+	FALSE	A-rich	SINE,Alu
chr17	73773311	T	G	0.00474	H3F3B	-	FALSE
chr1	33068435	A	G	0.00081	ZBTB8A	+	TRUE	AluY	SINE,Alu
chr1	53359181	A	G	0.00699	ZYG11A	+	TRUE	AluSx	SINE,Alu
chr3	196080531	T	C	0.00952	UBXN7	-	TRUE	AluSx	SINE,Alu
chr4	88060832	T	C	0.00531	AFF1	+	FALSE
chr2	28639641	C	G	0.00431		.	FALSE
chr1	19542410	T	C	0.00270	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	145512014	A	G	0.00370	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr10	102308801	G	C	0.00127	HIF1AN	+	FALSE	(GT)n	SINE,Alu
chr4	2841802	A	G	0.00016	SH3BP2	+	TRUE	AluJb	SINE,Alu
chr1	229738170	T	G	0.00168	TAF5L	-	FALSE
chr13	107196415	C	T	0.00285	ARGLU1	-	FALSE	(TTG)n	SINE,Alu
chr2	217366194	C	A	0.00359		.	FALSE
chr2	232028396	A	G	0.00701	PSMD1	+	FALSE
chr2	20818286	A	C	0.00714	HS1BP3	-	FALSE
chr1	144822920	A	T	0.00040	NBPF20,NBPF9	+	FALSE
chr1	16893721	A	C	0.00043	NBPF1	-	FALSE
chr12	53435277	G	T	2.75857E-05	EIF4B	+	FALSE
chr5	171533782	T	C	0.00039	STK10	-	FALSE
chr1	40538317	C	A	0.00178	CAP1	+	FALSE
chr1	6659505	G	A	0.00196	KLHL21	-	FALSE
chr1	206580231	A	G	0.00100	SRGAP2	+	FALSE
chr1	95392593	C	T	0.00173	CNN3	-	FALSE	(GGCGCG)n	SINE,Alu
chr1	145513017	A	G	3.59549E-05	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	53265957	T	C	0.00493	TKT	-	FALSE
chr1	145369556	A	G	0.00061	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr1	10519982	T	C	3.22355E-05		.	FALSE	AluJr	SINE,Alu
chr4	88059194	C	T	0.00681	AFF1	+	FALSE
chr1	11979814	G	A	0.00697	KIAA2013	-	FALSE
chr1	45226084	G	A	0.00970	KIF2C	+	FALSE
chr1	46751319	G	A	0.00085	LRRC41	-	FALSE
chr9	136209399	A	T	0.00011	MED22	-	FALSE
chr4	109551185	G	A	0.00344	RPL34	+	FALSE
chr17	57279258	A	G	0.00114	PRR11	+	TRUE	AluSq2	SINE,Alu
chr2	37431485	A	G	0.00339	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr1	53289892	A	G	0.00079	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	1650807	T	C	0.00096	CDK11B,CDK11A	-	FALSE
chr6	3021465	T	C	0.00029	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr1	207219603	T	C	0.00341	YOD1	-	FALSE
chr17	5288079	A	C	0.00085	RABEP1	+	FALSE
chr20	18468404	T	C	0.00301	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr1	75671215	C	T	0.00019	SLC44A5	-	FALSE
chr19	58375707	A	G	0.00156	ZNF587	+	TRUE	AluSg	SINE,Alu
chr1	32508397	T	C	0.00166	KHDRBS1	+	FALSE
chr1	28661736	A	G	0.00048	MED18	+	TRUE	AluSg	SINE,Alu
chr11	65544575	T	C	0.00200	AP5B1	-	TRUE	AluJb	SINE,Alu
chr5	64964627	T	C	0.00998	SGTB	-	TRUE	AluSx1	SINE,Alu
chr16	75479377	T	C	0.00639	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	10521172	T	C	0.00295	DFFA	-	TRUE	AluY	SINE,Alu
chr4	2940364	T	C	0.00329	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr2	172179003	T	C	0.00192	METTL8	-	TRUE	AluY	SINE,Alu
chr1	31732514	C	T	0.00588	SNRNP40	-	FALSE
chr3	122283287	T	C	8.96368E-06	DTX3L,PARP9	+,-	FALSE
chr1	40229368	A	G	0.00209	BMP8B,PPIE	+,-	FALSE
chr2	238463408	C	G	0.00644	MLPH	+	FALSE
chr12	26809316	G	A	0.00150	ITPR2	-	FALSE
chr1	67874697	T	C	4.44446E-05	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr8	124027562	C	T	0.00674	DERL1	-	FALSE
chr19	16661421	T	C	0.00427	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr1	26755229	A	G	0.00318	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr1	204524840	A	G	0.00557	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	154554947	T	G	0.00511	ADAR	-	FALSE
chr2	74090064	A	T	0.00197	STAMBP	+	FALSE
chr1	40537941	A	C	0.00216	CAP1	+	FALSE	(A)n	SINE,Alu
chrX	123046329	A	G	0.00809	XIAP	+	FALSE	AluJb	SINE,Alu
chr2	75888160	A	C	0.00188	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr1	27205214	T	C	0.00799		.	FALSE	AluSc	SINE,Alu
chr1	6282315	T	C	5.02629E-05	ICMT	-	TRUE	AluSz	SINE,Alu
chr16	29707549	A	G	0.00025	QPRT	+	TRUE	AluJr	SINE,Alu
chr1	28662253	A	G	0.00117	MED18	+	TRUE	AluSq2	SINE,Alu
chr12	53807911	A	T	0.00355	SP1	+	FALSE
chr3	44791536	T	C	4.11776E-05	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	246829873	G	A	0.00342	CNST	+	FALSE
chr1	89570148	A	G	0.00084		.	FALSE
chr1	10517691	T	C	0.00558		.	FALSE	AluSx1	SINE,Alu
chr1	53366673	A	G	0.00243	ECHDC2	-	FALSE	AluJb	SINE,Alu
chr14	23441536	G	A	0.00793	AJUBA	-	FALSE	GA-rich	SINE,Alu
chr1	52253845	T	C	0.00889	OSBPL9	+	FALSE	(AT)n	SINE,Alu
chr3	100043289	C	T	0.00049	TBC1D23	+	FALSE
chr1	10519932	T	C	5.00916E-05		.	FALSE	AluJr	SINE,Alu
chr5	149363219	A	G	0.00866	SLC26A2	+	FALSE	AluJr	SINE,Alu
chr1	38327700	T	C	0.00132	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr16	48386295	A	G	4.77364E-05	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr4	103809241	A	T	0.00073	CISD2,SLC9B1	+,-	FALSE
chr1	143189476	A	G	0.00160	LOC102723769	-	FALSE
chr1	117532790	C	T	0.00981	PTGFRN	+	FALSE
chr4	10076959	C	G	6.37978E-10	WDR1	-	FALSE
chr1	27992823	A	C	0.00087	IFI6	-	FALSE	FAM	SINE,Alu
chr1	220871123	A	G	0.00854	C1orf115	+	FALSE
chrX	77083617	T	C	3.46806E-05	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr8	38829839	A	G	0.00184	PLEKHA2	+	TRUE	AluJr4	SINE,Alu
chr14	64951277	T	C	0.00077	ZBTB25	-	TRUE	AluSp	SINE,Alu
chr1	148752615	C	A	0.00042		.	FALSE
chr3	195701389	C	A	0.00227	SDHAP1	-	FALSE
chr1	114515903	C	T	0.00169	HIPK1	+	FALSE
chr1	201846675	C	T	0.00146	IPO9	+	FALSE
chr5	36143392	C	T	0.00625	LMBRD2	-	FALSE
chr1	220970028	A	G	0.00444	MARC1	+	FALSE
chr1	11783889	A	G	0.00746		.	FALSE	AluSq	SINE,Alu
chr3	32524229	G	T	0.00359	CMTM6	-	FALSE
chr7	102016321	C	T	0.00201	LOC100289561,LOC100630923	+	FALSE
chr10	53456599	A	G	0.00339	PRKG1,CSTF2T	+,-	FALSE
chr19	11257673	T	C	0.00211	SPC24	-	TRUE	AluSp	SINE,Alu
chr19	57804362	G	A	0.00191	ZNF460	+	FALSE
chr20	35520935	T	C	0.00120	TLDC2,SAMHD1	+,-	FALSE	FLAM_A	SINE,Alu
chr3	152555188	G	T	0.00016	P2RY1	+	FALSE
chr1	33149414	A	G	5.81443E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	25894466	A	C	0.00783	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr3	160219095	G	A	0.00620	KPNA4	-	FALSE	A-rich	SINE,Alu
chr21	33032035	T	A	1.90109E-05	SOD1	+	FALSE
chr1	3730400	T	C	0.00457	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	10519982	T	C	0.00417		.	FALSE	AluJr	SINE,Alu
chr6	32800221	C	T	0.00900		.	FALSE	(GCATCA)n	SINE,Alu
chr1	145513031	A	G	0.00014	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr4	39552022	T	C	0.00015	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr10	120795222	A	T	0.00193	EIF3A	-	FALSE
chr3	45125417	G	A	0.00024	CDCP1	-	FALSE	AluJb	SINE,Alu
chr1	9160958	T	C	3.87385E-05		.	FALSE	AluJb	SINE,Alu
chr12	133298937	A	G	0.00240	PGAM5	+	TRUE	AluSg	SINE,Alu
chr1	25655853	A	G	0.00147	RSRP1,RHD	+,-	FALSE	AluSz	SINE,Alu
chr2	239970718	C	A	0.00244	HDAC4	-	FALSE	(AAAAC)n	SINE,Alu
chr11	6703162	A	T	0.00726	MRPL17	-	FALSE
chr3	30733403	A	T	0.00110	TGFBR2	+	FALSE	(TA)n	SINE,Alu
chr3	191110320	G	A	0.00419	CCDC50	+	FALSE
chr1	150281017	A	G	0.00057	MRPS21	+	TRUE	AluSz	SINE,Alu
chr1	61921200	A	T	0.00177	NFIA	+	FALSE
chr12	51324122	A	G	0.00226	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr10	79800439	A	T	0.00380	RPS24	+	FALSE
chr1	33145957	G	T	0.00189	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chr1	1252510	T	C	1.62601E-05	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr2	72968438	G	T	0.00147	EXOC6B	-	FALSE
chr14	53242639	T	C	1.43651E-05	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr1	168220479	A	G	0.00113		.	FALSE	AluSz6	SINE,Alu
chr1	9163328	T	C	0.00150		.	FALSE	AluSp	SINE,Alu
chr1	172411768	T	C	0.00416	C1orf105,PIGC	+,-	FALSE
chr20	29631627	T	C	0.00040	FRG1BP	+	FALSE
chr2	201774264	T	C	0.00639		.	FALSE	AluSz	SINE,Alu
chr1	241796948	T	C	0.00082	OPN3,CHML	-	FALSE
chr1	31344628	T	A	0.00085	SDC3	-	FALSE
chr1	53291435	A	G	0.00049	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	32158374	T	C	0.00134	COL16A1	-	FALSE
chr1	145512937	A	G	1.47906E-06	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr8	30536078	T	C	0.00509	GSR	-	FALSE	AluJr	SINE,Alu
chr1	53288870	A	G	0.00501	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	172547465	A	G	0.00725	SUCO	+	FALSE
chr1	10368093	C	A	0.00131	KIF1B	+	FALSE
chr1	146650542	A	G	0.00172	PDIA3P1	+	FALSE
chr1	45976112	A	G	1.14998E-06	MMACHC	+	TRUE	AluJr	SINE,Alu
chr1	150337289	G	T	0.00020	RPRD2	+	FALSE
chr1	45975345	A	G	9.37661E-05	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	109856378	C	A	0.00804	SORT1	-	FALSE
chr3	107765392	G	A	0.00038	CD47	-	FALSE
chr16	81064534	A	G	0.00480	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	160966299	T	C	0.00033	F11R	-	TRUE	AluSg	SINE,Alu
chr5	79923793	T	C	0.00074	DHFR	-	TRUE	AluSp	SINE,Alu
chr6	13790964	T	C	5.10728E-05	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr1	205686522	G	T	0.00427	NUCKS1	-	FALSE
chr1	24022912	G	A	4.29449E-05	RPL11	+	FALSE
chr4	6689813	C	A	0.00141		.	FALSE	L2b	SINE,Alu
chr2	24225006	A	G	0.00555		.	FALSE	AluSx	SINE,Alu
chr1	87379498	T	G	0.00784	SEP15	-	FALSE
chr3	195243006	C	A	0.00982	PPP1R2	-	FALSE
chr12	120898728	A	G	0.00947	GATC	+	TRUE	AluY	SINE,Alu
chr12	76423035	A	G	0.00025	PHLDA1	-	FALSE
chr1	220231276	T	C	0.00937	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	201939479	T	A	0.00645	TIMM17A	+	FALSE
chr5	41917695	C	T	0.00019	C5orf51	+	FALSE
chr15	90820083	A	G	4.07036E-06		.	FALSE	AluY	SINE,Alu
chr1	204526554	A	G	0.00194	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	10437995	G	A	0.00427	KIF1B	+	FALSE	AluSg	SINE,Alu
chr1	10519064	T	C	0.00192		.	FALSE	AluSx3	SINE,Alu
chr17	42876730	T	C	0.00024	GJC1	-	TRUE	AluSz6	SINE,Alu
chr1	10520045	T	C	0.00085		.	FALSE	AluSx	SINE,Alu
chr1	95362514	G	T	0.00658	CNN3	-	FALSE
chr2	203426264	C	T	0.00948	BMPR2	+	FALSE
chr5	93018884	A	C	0.00538	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr1	28060574	A	G	0.00206	FAM76A	+	FALSE
chr15	63988357	C	G	0.00539	HERC1	-	FALSE
chr5	118174668	T	C	1.32199E-05	DTWD2	-	TRUE	AluY	SINE,Alu
chr3	194361768	C	T	1.49766E-06	LSG1	-	FALSE	MSTA	SINE,Alu
chr16	747231	T	G	0.00269	FBXL16	-	FALSE
chr1	16892135	G	A	0.00221	NBPF1	-	FALSE
chr1	154179193	A	T	0.00122	C1orf43	-	FALSE
chr1	16890639	C	T	5.60894E-05	NBPF1	-	FALSE
chr17	78091513	G	A	0.00810	GAA	+	FALSE
chr1	113212976	C	T	0.00043	CAPZA1	+	FALSE
chr19	4428790	A	T	0.00000	CHAF1A	+	FALSE
chr1	182993025	C	T	0.00490	LAMC1	+	FALSE
chr17	55761035	G	A	0.00125	MSI2	+	FALSE
chr1	17733531	G	A	0.00223	RCC2	-	FALSE
chr3	15112612	T	C	0.00634	RBSN	-	TRUE	AluSq2	SINE,Alu
chr1	85278665	A	G	0.00242		.	FALSE
chr2	109401285	G	A	0.00087	RANBP2	+	FALSE
chr2	37327685	T	C	6.61966E-05		.	FALSE
chr1	145512925	A	G	0.00230	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	10520331	C	T	0.00527		.	FALSE	AluSx1	SINE,Alu
chr1	990773	C	T	0.00486	AGRN	+	FALSE
chr2	44459528	G	A	0.00126	PPM1B	+	FALSE
chr1	89477559	C	T	0.00044	GBP3	-	FALSE
chr2	101010038	G	A	0.00339	CHST10	-	FALSE
chr1	46075189	C	A	0.00597	NASP	+	FALSE	A-rich	SINE,Alu
chr2	24494638	T	G	0.00507	ITSN2	-	FALSE	(TATCCT)n	SINE,Alu
chr1	36068231	T	C	0.00508	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	46269493	G	C	0.00233	MAST2	+	FALSE
chr1	16945780	C	T	0.00034	CROCCP2	-	FALSE
chr4	84525985	T	G	0.00041	GPAT3	+	FALSE	(TTGTT)n	SINE,Alu
chr1	214529170	T	C	0.00120	PTPN14	-	TRUE
chr4	16258050	C	T	0.00617	TAPT1-AS1	+	FALSE
chr3	160134195	G	A	0.00631	SMC4	+	FALSE
chr12	117467580	A	G	0.00064	FBXW8	+	TRUE	AluSz	SINE,Alu
chr7	154796171	G	A	0.00066	PAXIP1-AS1	+	FALSE	AluSx3	SINE,Alu
chr1	6684050	G	A	2.21294E-05	PHF13	+	FALSE
chr1	40537924	G	A	0.00404	CAP1	+	FALSE	(A)n	SINE,Alu
chr16	10626624	T	C	0.00334	EMP2	-	FALSE	(T)n	SINE,Alu
chr6	71299074	A	G	0.00824		.	FALSE	AluSx1	SINE,Alu
chr3	100428460	G	C	5.60949E-08	TFG	+	FALSE
chr7	131188652	G	C	0.00684	PODXL	-	FALSE	MIR3	SINE,Alu
chr19	46052996	T	C	2.38036E-05	OPA3	-	TRUE	AluSz6	SINE,Alu
chr17	57656854	C	T	0.00928	DHX40	+	FALSE
chr9	86554217	C	T	0.00272	C9orf64	-	FALSE	AluSq2	SINE,Alu
chr1	154321623	G	A	0.00782	ATP8B2	+	FALSE
chr1	91486839	T	C	0.00329	ZNF644	-	FALSE
chr12	133334739	T	C	0.00388	ANKLE2	-	TRUE	AluSz	SINE,Alu
chr1	145369556	A	G	0.00373	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr7	102089261	A	G	0.00028	ORAI2	+	TRUE	AluSq2	SINE,Alu
chr4	73923043	T	C	0.00236	COX18	-	TRUE	AluSz	SINE,Alu
chr10	75008876	T	C	0.00255	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	145209366	A	G	0.00499	NBPF20,NOTCH2NL	+	FALSE
chr1	118411057	T	G	0.00254	GDAP2	-	FALSE
chr7	137612915	G	A	0.00057	CREB3L2	-	FALSE
chr11	118621699	T	C	0.00108	DDX6	-	FALSE
chr21	33974092	G	C	0.00865	C21orf59	-	FALSE
chr16	81064494	A	G	8.13539E-06	CENPN	+	TRUE	AluSg	SINE,Alu
chr2	37329261	T	C	0.00123		.	FALSE	AluJr4	SINE,Alu
chr3	49452957	A	T	0.00066	TCTA	+	FALSE	AluSg	SINE,Alu
chr7	131241049	G	A	0.00145	PODXL	-	FALSE	(GGCGAC)n	SINE,Alu
chr2	37331077	T	C	0.00937		.	FALSE	AluSx1	SINE,Alu
chr2	234775941	A	G	0.00161	MSL3P1	-	FALSE
chr3	45721905	A	G	0.00238	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr3	44791293	A	T	0.00031	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr4	57326291	A	G	0.00415	PAICS	+	TRUE	AluJr	SINE,Alu
chr2	128950491	A	G	0.00043	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	47685593	A	C	0.00891	TAL1	-	FALSE	(CCACCC)n	SINE,Alu
chr2	101638888	A	G	0.00127	TBC1D8	-	FALSE
chr1	100548868	T	C	0.00114	MFSD14A	+	FALSE
chr8	23294732	C	T	0.00415	ENTPD4	-	FALSE
chr3	33909611	C	T	0.00598	PDCD6IP	+	FALSE
chr1	6583701	T	C	0.00029	NOL9	-	FALSE
chr1	10519064	T	C	0.00515		.	FALSE	AluSx3	SINE,Alu
chr1	145512078	A	G	0.00099	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	30733690	C	A	0.00353	TGFBR2	+	FALSE
chr3	52800284	T	C	6.08396E-05	NEK4	-	FALSE
chr11	118880839	A	G	0.00922	CCDC84	+	TRUE	AluJb	SINE,Alu
chr11	125525572	A	C	0.00016	CHEK1	+	FALSE
chr1	65898263	A	G	0.00767	LEPR,LEPROT	+	FALSE	MIRc	SINE,Alu
chr3	49396588	T	C	0.00533	RHOA	-	FALSE
chr6	3022725	T	C	0.00081	HTATSF1P2	-	TRUE	AluSz	SINE,Alu
chr1	26801731	G	T	0.00146	HMGN2	+	FALSE	(T)n	SINE,Alu
chr2	70677439	A	G	0.00498	TGFA	-	FALSE
chr22	37962318	T	C	0.00884	CDC42EP1	+	FALSE
chr8	98736864	T	A	0.00086	MTDH	+	FALSE
chr2	99812978	A	G	0.00167	MRPL30	+	TRUE	AluJb	SINE,Alu
chr6	37138024	G	C	0.00892	PIM1	+	FALSE	(GCA)n	SINE,Alu
chr4	47593283	G	C	0.00110	ATP10D	+	FALSE
chr4	2940164	T	C	0.00381	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	1655474	G	A	0.00694	CDK11B,CDK11A	-	FALSE
chr1	15993699	C	A	0.00011		.	FALSE	AluSx4	SINE,Alu
chr1	92862862	A	G	0.00024		.	FALSE	AluJr	SINE,Alu
chr5	125962086	A	G	0.00231	PHAX	+	TRUE	AluSz	SINE,Alu
chr2	99812447	A	G	0.00587	MRPL30	+	TRUE	AluSx	SINE,Alu
chr3	10142949	C	T	0.00612	FANCD2,FANCD2OS	+,-	FALSE
chr16	69151495	T	A	0.00304	HAS3	+	FALSE	(T)n	SINE,Alu
chr2	223807622	G	T	0.00875	ACSL3	+	FALSE
chr1	26143725	A	T	0.00291	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	2161135	A	G	0.00028	SKI	+	FALSE
chr5	38904482	G	A	0.00048	OSMR	+	FALSE
chr1	36921372	A	T	0.00259	MRPS15	-	FALSE
chr7	44841238	T	A	0.00108	PPIA	+	FALSE
chr14	50792837	A	G	0.00550	ATP5S	+	TRUE	AluSx	SINE,Alu
chr1	144618144	A	G	0.00725	NBPF20,NBPF9	+	FALSE
chr2	33046027	G	C	0.00397	TTC27	+	FALSE
chr1	205684067	T	C	0.00499	NUCKS1	-	FALSE
chr9	116139063	G	C	0.00321	HDHD3	-	FALSE
chr1	231557255	C	G	0.00056	EGLN1	-	FALSE	(GCC)n	SINE,Alu
chr3	15112510	T	C	0.00710	RBSN	-	FALSE	AluSq2	SINE,Alu
chr1	10521200	T	C	0.00013	DFFA	-	TRUE	AluY	SINE,Alu
chr8	56985608	A	T	0.00077	RPS20	-	FALSE
chr12	120898554	A	G	0.00124	GATC	+	TRUE	AluY	SINE,Alu
chr17	5288081	C	T	0.00518	RABEP1	+	FALSE
chr1	179012947	C	G	0.00501	FAM20B	+	FALSE
chr1	118167515	C	T	2.81283E-05	FAM46C	+	FALSE
chr1	145116325	T	C	0.00101	NBPF20,SEC22B	+	FALSE	(TTTTGTTT)n	SINE,Alu
chr1	19543364	T	C	0.00447	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr5	43175369	G	T	7.56035E-05	ZNF131	+	FALSE
chr4	843695	A	G	0.00602	GAK	-	FALSE
chr1	36067784	T	C	0.00821	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	196999052	C	G	0.00358	STK17B	-	FALSE	MER1B	SINE,Alu
chr2	128601426	T	C	0.00034		.	FALSE	AluJr	SINE,Alu
chr17	38788606	G	T	1.11022E-15	SMARCE1	-	FALSE
chr3	101369192	C	T	0.00761	ZBTB11	-	FALSE
chr2	217366673	A	G	0.00517		.	FALSE	AluSz	SINE,Alu
chr3	14175262	T	C	3.06250E-10	TMEM43	+	FALSE
chr8	48889705	A	G	0.00339	MCM4	+	TRUE	AluSx3	SINE,Alu
chr1	145441838	C	G	0.00790	NBPF20,NBPF10,TXNIP	+	FALSE
chr7	22983890	T	C	0.00097	FAM126A	-	FALSE
chr7	44841237	T	A	8.97456E-05	PPIA	+	FALSE
chr3	195962244	G	T	0.00083		.	FALSE
chr1	236208773	C	T	0.00722	NID1	-	FALSE
chr1	28859267	A	C	2.52971E-07	RCC1	+	FALSE
chr7	154796233	A	G	0.00545	PAXIP1-AS1	+	TRUE	AluSx3	SINE,Alu
chr3	50296330	G	A	0.00645	GNAI2	+	FALSE
chr12	120898661	A	G	2.17580E-05	GATC	+	TRUE	AluY	SINE,Alu
chr1	9644558	A	G	0.00451		.	FALSE	AluSx	SINE,Alu
chr1	114443475	A	G	0.00538	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr1	36068276	T	C	2.73596E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr22	18571457	A	G	0.00493	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	1152309	A	T	0.00035	SDF4	-	FALSE
chr4	120979190	T	C	0.00970		.	FALSE	AluSg4	SINE,Alu
chr1	145283718	G	A	0.00897	NBPF20,NOTCH2NL	+	FALSE
chr11	119533726	A	G	0.00169	NECTIN1	-	FALSE
chr1	26144434	G	T	0.00945	SEPN1	+	FALSE
chr1	16901668	T	C	0.00177	NBPF1	-	FALSE
chr1	184663537	A	C	0.00256	EDEM3	-	FALSE
chr1	161338504	C	G	0.00343		.	FALSE
chr5	125880589	T	C	0.00122	ALDH7A1	-	FALSE
chr4	2070260	G	A	0.00724	NAT8L	+	FALSE	(TG)n	SINE,Alu
chr1	11979814	G	A	0.00041	KIAA2013	-	FALSE
chr9	139698779	C	G	0.00106	CCDC183,CCDC183-AS1	+,-	FALSE	L2b	SINE,Alu
chr1	220232066	T	C	0.00673	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	43391823	C	T	0.00718	SLC2A1	-	FALSE
chr1	54871874	C	T	1.50809E-06	SSBP3	-	FALSE
chr19	63721	T	G	0.00602	WASH5P	-	FALSE
chr1	46075791	A	G	0.00120	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	37958451	C	G	0.00882	MEAF6	-	FALSE	MER5B	SINE,Alu
chr2	102484482	G	A	0.00213	MAP4K4	+	FALSE
chr2	206983255	T	C	0.00246		.	FALSE	AluJb	SINE,Alu
chr6	13790931	T	C	0.00122	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr3	10192704	A	G	0.00402	VHL	+	TRUE	AluSx1	SINE,Alu
chr4	36121334	C	G	0.00057	ARAP2	-	FALSE
chr1	68167217	G	T	0.00036	GNG12	-	FALSE
chr2	103333654	A	T	0.00488	MFSD9	-	FALSE	AluYm1	SINE,Alu
chr3	10192672	G	A	5.82875E-07	VHL	+	FALSE	AluSx1	SINE,Alu
chr1	38158211	C	T	0.00091	CDCA8	+	FALSE
chr1	31732603	A	C	0.00148	SNRNP40	-	FALSE
chr1	1251847	T	C	0.00999	CPSF3L	-	FALSE	AluSq2	SINE,Alu
chr1	36068364	T	C	9.25575E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	19934839	A	G	0.00052	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr4	6925237	C	G	0.00870	TBC1D14	+	FALSE
chr1	17522430	A	G	0.00684		.	FALSE
chr8	11700373	T	C	0.00212	CTSB	-	TRUE	AluSq2	SINE,Alu
chr5	112350098	C	T	7.36383E-05	DCP2	+	FALSE
chr1	45976723	T	C	0.00340	MMACHC,PRDX1	+,-	FALSE
chr1	22357435	A	C	0.00454	LINC00339	+	FALSE
chr5	140025058	G	T	0.00392	NDUFA2	-	FALSE
chr16	88789700	C	T	0.00703	PIEZO1	-	FALSE
chr3	183889337	A	T	3.46641E-05	DVL3	+	FALSE
chr3	11596302	T	C	0.00110	ATG7	+	FALSE
chr5	180262080	A	G	0.00259	LINC00847	+	TRUE	MLT2B3	SINE,Alu
chr3	63996230	A	T	0.00309	PSMD6-AS2,PSMD6	+,-	FALSE
chr1	205056301	A	G	0.00506	RBBP5	-	FALSE
chr12	69237019	A	G	2.84819E-05	MDM2	+	TRUE
chr1	12677525	G	A	0.00122	DHRS3	-	FALSE	(A)n	SINE,Alu
chr4	2940413	T	C	0.00311	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr4	25236017	T	C	2.76644E-09	PI4K2B	+	FALSE
chr1	19543282	T	C	0.00228	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	16889217	G	C	0.00795	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr1	19543456	T	C	3.77297E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr14	75202950	A	G	0.00307	FCF1	+	TRUE	AluSx	SINE,Alu
chr1	19542679	T	C	1.36514E-06	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr1	97144750	T	C	0.00262		.	FALSE
chr3	40578933	A	G	0.00947	ZNF621	+	TRUE	AluJr	SINE,Alu
chr3	183900680	G	C	0.00294	AP2M1	+	FALSE	MIR3	SINE,Alu
chr1	145512074	A	G	0.00084	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	19542455	T	C	0.00263	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	154317153	C	T	0.00567	ATP8B2	+	FALSE
chr1	32373837	G	T	0.00681	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr2	10586904	C	T	0.00041	ODC1,SNORA80B	-	FALSE
chr9	132268440	A	G	3.40625E-05	LINC00963	+	TRUE	AluJb	SINE,Alu
chr3	20025679	A	G	0.00292	RAB5A,PP2D1	+,-	FALSE
chr6	36894341	G	A	0.00575	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr1	1234095	C	A	0.00039	ACAP3	-	FALSE
chr1	23631625	A	G	0.00536	HNRNPR	-	FALSE	UCON44	SINE,Alu
chr16	81064543	A	G	0.00066	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	45975269	A	G	0.00098	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr2	37327685	T	C	0.00057		.	FALSE
chr1	8045343	C	A	0.00162		.	FALSE
chr15	90819409	A	G	5.75884E-05		.	FALSE	AluSx	SINE,Alu
chr1	67518534	C	T	0.00030	SLC35D1	-	FALSE

RBP	LARP7
Knock-Method	shRNA
RBP Family	RRM_3
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR770OWW
Platform	HiSeq
Pubmed ID	32252787

LARP7 - Target Gene Network