RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	62282907	C	T	9.50704E-05	PTPRG-AS1	-	FALSE
chr1	11083183	G	T	0.00342	TARDBP	+	FALSE
chr11	20101744	C	A	0.00540	NAV2	+	FALSE
chr1	70718273	A	T	0.00256		.	FALSE
chr1	92862896	A	G	6.86172E-05		.	FALSE	AluJr	SINE,Alu
chr1	36068295	T	C	0.00057	PSMB2	-	TRUE	AluSc	SINE,Alu
chr6	160101723	T	C	0.00234	SOD2	-	TRUE	AluSz	SINE,Alu
chr2	37331929	T	C	0.00518		.	FALSE	L1MC4	SINE,Alu
chr5	6633042	C	T	0.00348	NSUN2	-	FALSE
chr3	197611095	A	G	0.00694		.	FALSE	AluSx1	SINE,Alu
chr3	49396588	T	C	0.00239	RHOA	-	FALSE
chr2	228421461	G	C	0.00069	AGFG1	+	FALSE
chr2	64863970	C	T	9.52027E-09	SERTAD2	-	FALSE
chr3	47036756	C	G	0.00091	NBEAL2	+	FALSE
chr11	768386	T	C	0.00208	PDDC1	-	TRUE	AluSc	SINE,Alu
chr2	37328042	T	C	6.80414E-06		.	FALSE
chr1	28865500	T	A	0.00509	RCC1	+	FALSE
chr7	64435678	T	A	0.00256	ZNF117	-	FALSE
chr1	28661633	A	G	0.00053	MED18	+	TRUE	AluSg	SINE,Alu
chr1	44818528	T	G	0.00486	ERI3	-	FALSE
chr1	16890639	C	T	0.00095	NBPF1	-	FALSE
chr1	169101270	T	G	0.00036	ATP1B1	+	FALSE	(T)n	SINE,Alu
chr4	17802890	T	C	0.00303	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	165370475	G	C	0.00256	RXRG	-	FALSE
chr1	9162223	T	C	0.00586		.	FALSE	AluSx	SINE,Alu
chr1	16933135	G	T	2.86961E-06	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr3	44791536	T	C	4.11776E-05	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr12	98942644	A	G	0.00133	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	244219905	G	T	0.00772	ZBTB18	+	FALSE
chr1	26774224	A	G	0.00100	DHDDS	+	TRUE	AluSz6	SINE,Alu
chr1	36068231	T	C	0.00935	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	145284136	G	A	0.00072	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr1	145512151	C	A	0.00723	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr5	96366326	G	C	0.00120		.	FALSE	(TG)n	SINE,Alu
chr1	10521170	T	C	0.00104	DFFA	-	TRUE	AluY	SINE,Alu
chr3	48787052	T	C	0.00226	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	17998	C	T	0.00194	WASH7P	-	FALSE
chr5	180001389	G	A	0.00138	CNOT6	+	FALSE
chr6	31322980	C	T	0.00091		.	FALSE
chr6	159395409	T	C	0.00136		.	FALSE
chr2	36704035	C	A	0.00012	CRIM1	+	FALSE
chr1	205687351	T	C	2.02150E-05	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr21	40567665	G	A	0.00786	BRWD1	-	FALSE
chr7	149318375	C	T	0.00383	ZNF767P	-	FALSE
chr1	6282224	T	C	0.00062	ICMT	-	TRUE	AluSz	SINE,Alu
chr3	88104073	G	C	0.00887	CGGBP1	-	FALSE
chr5	34906662	T	C	4.70471E-07	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	26796922	G	C	0.00401	DHDDS	+	FALSE	FLAM_C	SINE,Alu
chr1	2125114	C	T	8.70493E-12	FAAP20	-	FALSE
chr1	27107650	T	A	3.71504E-05	ARID1A	+	FALSE
chr16	80636808	C	T	0.00881	CDYL2	-	FALSE
chr1	53291434	A	G	6.17060E-06	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr3	42594019	C	T	3.51223E-05	SEC22C	-	FALSE
chr1	168218735	A	G	0.00924		.	FALSE	AluSz	SINE,Alu
chr4	57326313	A	G	0.00132	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	1570919	C	T	0.00161	CDK11B	-	FALSE
chr3	172350135	A	T	9.93187E-07	NCEH1	-	FALSE
chrX	16781186	A	G	0.00220		.	FALSE	AluJo	SINE,Alu
chr1	179042687	A	G	0.00163	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	53288862	A	G	0.00155	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr3	58306666	A	G	0.00139		.	FALSE	AluSz	SINE,Alu
chr15	71124666	C	A	4.50846E-10	LARP6	-	FALSE
chr1	16933135	G	T	0.00363	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	9328120	A	G	4.35354E-06	H6PD	+	TRUE	AluJr	SINE,Alu
chr14	53242652	T	C	0.00081	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr10	47221452	T	C	0.00869		.	FALSE	AluJb	SINE,Alu
chr1	20510981	G	C	0.00197	UBXN10-AS1	-	FALSE
chr2	86252080	T	C	0.00017	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	1419888	A	G	0.00630	ATAD3B	+	TRUE	AluSp	SINE,Alu
chr1	9162362	T	C	0.00526		.	FALSE	AluSx	SINE,Alu
chr19	63633	C	T	0.00999	WASH5P	-	FALSE	MLT1K	SINE,Alu
chr2	238678004	A	G	0.00631	LRRFIP1	+	FALSE
chr1	36067760	T	C	0.00021	PSMB2	-	TRUE	AluSz	SINE,Alu
chr16	10623545	T	C	0.00142	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	44447006	T	C	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr1	179325847	A	G	7.26692E-05	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	213069783	A	G	0.00600	FLVCR1	+	FALSE
chr8	62538200	A	T	0.00552	ASPH	-	FALSE
chr1	9160976	T	C	0.00015		.	FALSE	AluJb	SINE,Alu
chr1	145689025	A	G	0.00541	NBPF20,NBPF10	+	TRUE	AluSc8	SINE,Alu
chr9	136229572	T	C	3.43806E-09	SURF4	-	TRUE
chr15	90820171	A	G	0.00185		.	FALSE
chr4	164245873	T	A	0.00014	NPY1R	-	FALSE
chr1	236714710	C	T	0.00014	LGALS8,HEATR1	+,-	FALSE
chr17	29578724	C	T	0.00514	NF1	+	FALSE
chr3	172117459	C	A	0.00791	FNDC3B	+	FALSE
chr2	75118856	T	C	1.43220E-05	HK2	+	FALSE	(ATTTTA)n	SINE,Alu
chr3	44791398	T	C	0.00081	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr6	13788222	T	C	0.00490	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	50906945	C	T	0.00178	FAF1	-	FALSE
chr1	214525603	A	G	0.00047	PTPN14	-	FALSE
chr10	75008955	T	C	0.00058	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	117648269	G	A	0.00988		.	FALSE	AluSz6	SINE,Alu
chr2	201774641	T	C	0.00928		.	FALSE	AluJr4	SINE,Alu
chr1	228880098	T	A	4.07865E-05	RHOU	+	FALSE
chr2	37328075	T	C	0.00863		.	FALSE
chr12	98942885	A	G	1.31269E-05	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	20976843	G	C	0.00202	PINK1,PINK1-AS	+,-	FALSE
chr1	22855441	C	T	0.00884	ZBTB40	+	FALSE
chr1	35816903	C	T	0.00174	ZMYM4	+	FALSE
chr2	99812864	A	G	0.00458	MRPL30	+	TRUE	AluJb	SINE,Alu
chr15	90627429	T	C	0.00013	IDH2	-	FALSE
chr1	109747415	A	G	0.00549	KIAA1324	+	TRUE	AluJr4	SINE,Alu
chr1	45976220	A	G	0.00031	MMACHC	+	TRUE
chr2	99812988	A	G	8.76694E-05	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	20976023	T	C	6.30669E-06	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr2	86252038	T	C	0.00453	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	200375835	G	T	0.00063	ZNF281	-	FALSE	(T)n	SINE,Alu
chr17	48771486	G	A	0.00081	ANKRD40	-	FALSE	AluSz	SINE,Alu
chr2	37329369	T	C	0.00010		.	FALSE	AluJr4	SINE,Alu
chr1	33148623	A	G	0.00221	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr2	206987635	T	C	0.00930		.	FALSE	AluJb	SINE,Alu
chr1	66100980	A	T	0.00033	LEPR	+	FALSE
chr7	29962282	G	C	0.00023	SCRN1	-	FALSE
chr1	145283718	G	A	0.00989	NBPF20,NOTCH2NL	+	FALSE
chr1	51822219	G	A	0.00223	EPS15	-	FALSE
chr6	34231288	A	G	0.00143		.	FALSE
chr1	204524546	A	G	0.00054	MDM4	+	TRUE	AluY	SINE,Alu
chr16	57505637	T	A	0.00643	POLR2C	+	FALSE
chr5	149361415	A	G	0.00290	SLC26A2	+	TRUE
chr2	128620436	C	T	0.00342	AMMECR1L	-	FALSE
chr22	36677549	C	T	0.00040	MYH9	-	FALSE
chr12	80014907	A	T	0.00737	PAWR	-	FALSE
chr7	29963082	G	A	0.00118	SCRN1	-	FALSE
chr7	112579815	G	T	0.00997	BMT2	-	FALSE	(CGC)n	SINE,Alu
chr1	145688956	A	G	0.00155	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	77759578	A	G	0.00492	AK5	+	FALSE
chr17	65335253	T	C	0.00344	PSMD12	-	TRUE	AluSx	SINE,Alu
chr6	74134075	T	C	0.00018		.	FALSE	AluY	SINE,Alu
chr1	38423184	C	T	4.70100E-06	SF3A3	-	FALSE	AluJo	SINE,Alu
chr2	191184475	A	G	0.00895	HIBCH	-	FALSE
chr1	3806074	G	A	0.00809	C1orf174	-	FALSE	AluSp	SINE,Alu
chr1	38423205	A	G	0.00923	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	184661932	A	G	0.00063	EDEM3	-	FALSE
chr2	201774341	T	C	0.00073		.	FALSE	AluSz	SINE,Alu
chr1	116235186	A	G	0.00054	VANGL1	+	FALSE
chr1	19543356	T	C	0.00110	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr6	42856905	A	G	4.80826E-12	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr2	71214819	A	T	0.00346	TEX261	-	FALSE
chr1	111721354	G	T	0.00616	CEPT1	+	FALSE
chr2	162268108	G	A	0.00091	PSMD14	+	FALSE
chr1	9330479	C	T	0.00027	H6PD	+	FALSE
chr1	21102501	G	A	0.00148	HP1BP3	-	FALSE
chr1	179326882	A	G	0.00020	SOAT1	+	TRUE	AluJo	SINE,Alu
chr4	84525985	T	G	0.00041	GPAT3	+	FALSE	(TTGTT)n	SINE,Alu
chr20	57603730	A	T	0.00101		.	FALSE
chr1	24086794	G	T	0.00309	TCEB3	+	FALSE	(T)n	SINE,Alu
chr1	179044242	A	G	0.00335	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	109746728	A	G	0.00171	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr19	11256725	T	C	0.00096	SPC24	-	TRUE	AluJr4	SINE,Alu
chr17	45761109	T	G	0.00018		.	FALSE
chrX	3523058	A	C	0.00019	PRKX	-	FALSE	(AC)n	SINE,Alu
chr3	155660773	A	G	0.00592		.	FALSE	AluSz	SINE,Alu
chr9	130209956	A	T	0.00221	RPL12	-	FALSE
chr13	50102992	T	C	0.00956	SETDB2-PHF11,PHF11	+	FALSE	L2a	SINE,Alu
chr3	133538762	A	T	0.00804	SRPRB	+	FALSE
chr1	45975345	A	G	0.00071	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr6	24720539	G	C	0.00225		.	FALSE
chr1	154554940	G	C	0.00032	ADAR	-	FALSE
chr7	117832138	G	A	0.00885	LSM8	+	FALSE
chr1	33148721	A	G	0.00359	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr6	43747964	G	A	0.00542	VEGFA	+	FALSE
chr2	37329238	T	C	0.00754		.	FALSE	AluJr4	SINE,Alu
chr11	4159457	A	G	0.00764	RRM1	+	FALSE
chr1	19542458	T	C	7.14858E-05	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	10519946	T	C	0.00578		.	FALSE	AluJr	SINE,Alu
chr1	67874731	T	C	0.00613	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	156565056	C	T	0.00498	GPATCH4	-	FALSE
chr1	9740895	A	T	0.00136	PIK3CD,PIK3CD-AS2	+,-	FALSE	MLT1F1	SINE,Alu
chr4	57194712	A	C	0.00399	KIAA1211	+	FALSE
chr2	37330612	T	C	0.00136		.	FALSE	AluSq2	SINE,Alu
chr8	30536078	T	C	5.73232E-10	GSR	-	FALSE	AluJr	SINE,Alu
chr10	5499824	A	G	0.00070	NET1	+	FALSE
chr1	6583457	T	C	0.00075	NOL9	-	TRUE	AluSq	SINE,Alu
chr17	78921108	G	A	0.00065	RPTOR	+	FALSE
chr4	1205667	A	C	0.00990	CTBP1-AS,CTBP1	+,-	FALSE	(A)n	SINE,Alu
chr13	30084952	G	A	0.00045	SLC7A1	-	FALSE
chr4	39552022	T	C	0.00840	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr19	19792444	A	G	0.00686	ZNF101	+	TRUE	AluJb	SINE,Alu
chr7	36447345	A	T	0.00553	ANLN	+	FALSE
chr3	48787052	T	C	0.00866	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr4	16040617	C	T	0.00032	PROM1	-	FALSE
chr1	85787118	G	C	0.00104	DDAH1	-	FALSE
chr1	16945027	T	C	0.00819	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr19	42376675	A	G	0.00085		.	FALSE
chr3	195395399	G	A	0.00556	SDHAP2	+	FALSE
chr14	74526154	T	C	0.00030	BBOF1,ALDH6A1	+,-	FALSE	AluSp	SINE,Alu
chr1	23636875	T	A	0.00686	HNRNPR	-	FALSE
chr2	106510202	C	T	0.00854	NCK2	+	FALSE
chr3	10065426	C	T	0.00776	CIDECP	-	FALSE
chr1	19420619	C	G	0.00339	UBR4	-	FALSE
chr1	44088117	G	T	0.00731	PTPRF	+	FALSE	(T)n	SINE,Alu
chr5	70248478	G	A	0.00229	SMN1,SMN2	+	FALSE	L1MC5a	SINE,Alu
chr1	16768088	G	A	0.00063	NECAP2	+	FALSE
chr1	116234313	A	G	0.00016	VANGL1	+	FALSE
chr1	145688983	A	G	0.00072	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr4	68587786	G	T	0.00658	UBA6-AS1	+	FALSE	MER41B	SINE,Alu
chr1	36068231	T	C	0.00508	PSMB2	-	TRUE	AluSc	SINE,Alu
chr18	691521	T	C	0.00150	ENOSF1	-	TRUE	AluJr	SINE,Alu
chr7	35840866	A	G	0.00947	SEPT7	+	FALSE
chr1	117531096	C	T	0.00168	PTGFRN	+	FALSE
chr1	204521580	A	G	0.00469	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	16952896	G	A	2.20079E-06	CROCCP2	-	FALSE
chr1	28785729	G	A	0.00181	PHACTR4	+	FALSE
chr19	42376692	A	G	0.00540		.	FALSE	AluSp	SINE,Alu
chr1	25570563	A	T	0.00276	RSRP1	-	FALSE	Alu	SINE,Alu
chr2	99812988	A	G	0.00700	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	200521297	C	T	0.00133	KIF14	-	FALSE	(T)n	SINE,Alu
chr1	16889502	T	C	5.54778E-06	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	210004332	G	A	0.00813	DIEXF	+	FALSE
chr4	129924977	C	A	0.00760	SCLT1	-	FALSE
chr5	130537154	A	G	0.00951	LYRM7	+	TRUE	AluSp	SINE,Alu
chr2	191065246	T	A	0.00594	C2orf88	+	FALSE
chr2	128603114	T	C	0.00143		.	FALSE	AluSp	SINE,Alu
chr2	176042866	A	T	0.00596	ATP5G3	-	FALSE
chr5	150647744	A	G	0.00036	GM2A	+	TRUE	AluSc	SINE,Alu
chr6	34252328	T	A	0.00062		.	FALSE	(T)n	SINE,Alu
chr6	42856959	A	G	6.63353E-07	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr7	2290637	C	T	0.00956	NUDT1	+	FALSE
chr1	19542693	T	C	0.00024	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr7	2394991	C	T	9.93448E-08	EIF3B	+	FALSE
chr5	149363214	A	G	6.58903E-07	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr13	25473685	C	T	0.00580	CENPJ	-	FALSE
chr1	40145850	G	C	0.00035	HPCAL4	-	FALSE
chr1	9328120	A	G	0.00128	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	214524044	T	C	0.00242	PTPN14	-	TRUE	AluSx	SINE,Alu
chr2	128063523	G	C	0.00174	MAP3K2	-	FALSE
chr5	149829076	G	C	0.00288	RPS14	-	FALSE
chr3	109049177	A	T	0.00044	DPPA4	-	FALSE	AluSp	SINE,Alu
chr4	17803578	T	C	0.00712	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	20977533	G	C	0.00234	PINK1,PINK1-AS	+,-	FALSE
chr1	36067677	T	C	5.01583E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr6	31947917	C	T	0.00670		.	FALSE
chr2	9630247	T	G	0.00638	ADAM17	-	FALSE
chr3	48787909	T	C	6.24209E-06	PRKAR2A	-	TRUE	AluJr	SINE,Alu
chr2	37872508	G	A	5.12140E-05	CDC42EP3	-	FALSE
chr4	17804872	T	C	0.00096	DCAF16	-	TRUE	AluSx	SINE,Alu
chr3	88199298	T	C	0.00048	C3orf38	+	FALSE
chr1	93803490	T	C	0.00572	CCDC18-AS1	-	FALSE	AluJr	SINE,Alu
chr2	232574807	C	G	0.00134	PTMA	+	FALSE
chr2	86252136	T	C	0.00015	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	3545194	C	G	0.00254	TPRG1L	+	FALSE
chr1	40537941	A	C	0.00216	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	93827991	A	C	0.00533	DR1	+	FALSE
chr10	75008815	T	C	0.00309	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	120163248	G	A	4.97770E-06	ZNF697	-	FALSE
chr15	34634033	A	G	0.00939	NOP10	-	FALSE
chr3	10192617	A	G	2.94246E-06	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	11782935	A	G	0.00067		.	FALSE	AluSx	SINE,Alu
chr2	7182946	T	C	0.00748	RNF144A	+	FALSE
chr1	45244413	T	A	0.00750		.	FALSE
chr1	138156	G	T	0.00177	LOC729737	-	FALSE
chr2	28635740	T	C	0.00358	FOSL2	+	FALSE
chr11	69468187	G	T	0.00827	CCND1	+	FALSE	(T)n	SINE,Alu
chr1	40537924	G	A	0.00476	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	183155546	G	A	0.00103	LAMC2	+	FALSE
chr3	69151152	C	A	0.00750	ARL6IP5	+	FALSE
chr7	131241085	G	A	0.00600	PODXL	-	FALSE	(GCA)n	SINE,Alu
chr14	31916927	T	C	1.57126E-05	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr2	44115183	T	A	0.00914	LRPPRC	-	FALSE
chr1	40539208	A	T	2.90582E-07	PPT1	-	FALSE
chr1	27190857	C	T	0.00160	SFN	+	FALSE
chr1	10520715	T	C	0.00119	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	10521126	T	C	0.00560	DFFA	-	TRUE	AluY	SINE,Alu
chr4	38945689	C	T	1.01800E-05	FAM114A1	+	FALSE	AluSc	SINE,Alu
chr16	67715404	T	C	0.00102	GFOD2	-	TRUE	AluSz	SINE,Alu
chr1	35644503	T	A	0.00551	SFPQ	-	FALSE
chr1	38158211	C	T	0.00113	CDCA8	+	FALSE
chr5	93018883	A	T	0.00393	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr5	149829068	C	T	0.00038	RPS14	-	FALSE
chr12	56510559	A	G	0.00137	RPL41	+	FALSE
chr4	39550612	T	C	0.00023	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr16	88763958	G	A	7.55606E-05	RNF166	-	FALSE
chr2	201842323	T	C	0.00390	FAM126B	-	TRUE	AluJb	SINE,Alu
chr1	65297860	A	T	0.00847	RAVER2	+	FALSE
chr1	214529320	T	G	0.00365	PTPN14	-	FALSE	AluJb	SINE,Alu
chr8	30536544	T	C	0.00122	GSR	-	TRUE	AluSp	SINE,Alu
chr1	149885583	A	G	0.00030	SV2A	-	FALSE
chr1	19586501	A	G	0.00288	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	6165419	C	T	0.00883	CHD5	-	FALSE
chr15	63111739	T	C	0.00914	TLN2	+	FALSE
chr17	41144609	G	A	0.00821	RUNDC1	+	FALSE
chr1	46077268	A	G	0.00311	NASP	+	TRUE	AluSc8	SINE,Alu
chr1	10520174	T	C	0.00158		.	FALSE	AluSx	SINE,Alu
chr1	86117122	T	C	0.00462	ZNHIT6	-	FALSE	AluSg	SINE,Alu
chr1	19542239	T	C	0.00038	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	127341226	A	G	0.00049	MCM2	+	FALSE
chr1	32669918	G	A	0.00344	CCDC28B	+	FALSE
chr1	150281090	A	G	3.10555E-05	MRPS21	+	TRUE	AluSz	SINE,Alu
chr3	196044972	C	T	0.00258	TCTEX1D2,TM4SF19-TCTEX1D2	-	FALSE
chr1	150621090	G	A	0.00212	GOLPH3L	-	FALSE
chr1	190234133	A	C	5.13910E-06	BRINP3	-	FALSE
chr3	9848198	G	T	0.00295	ARPC4,ARPC4-TTLL3	+	FALSE	(T)n	SINE,Alu
chr6	42856157	A	G	0.00081	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr7	44917316	T	C	0.00564	PURB	-	FALSE	AluSz	SINE,Alu
chr1	212277584	G	C	0.00997	DTL	+	FALSE
chr5	151041886	T	G	0.00176	SPARC	-	FALSE
chr2	206986245	T	C	0.00979		.	FALSE	AluSz	SINE,Alu
chr1	10519888	T	C	0.00218		.	FALSE	AluJr	SINE,Alu
chr1	154323560	A	T	0.00013	ATP8B2	+	FALSE
chr1	138156	G	T	0.00413	LOC729737	-	FALSE
chr8	26435509	T	C	0.00121	DPYSL2	+	FALSE	(TC)n	SINE,Alu
chr14	31916783	T	C	3.40362E-05	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr2	37331065	T	C	0.00585		.	FALSE	AluSx1	SINE,Alu
chr1	53291425	A	G	2.55913E-05	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr2	102793246	A	G	0.00904	IL1R1	+	FALSE
chr1	1594977	T	C	0.00487	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	36024788	C	T	5.60663E-14	NCDN	+	FALSE
chr2	32235359	A	C	0.00664	MEMO1	-	FALSE
chr1	27202835	T	C	0.00094		.	FALSE	AluSq2	SINE,Alu
chr10	13320111	G	T	0.00571	PHYH	-	FALSE
chr9	131457814	G	A	0.00021	SET	+	FALSE
chr1	148003752	T	C	3.77288E-10	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	1459332	G	A	1.33172E-08	ATAD3A	+	FALSE
chr3	14986104	T	C	6.84901E-10	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr8	95804615	A	G	0.00968	DPY19L4	+	TRUE	AluSq2	SINE,Alu
chr1	10517527	T	C	8.32015E-05		.	FALSE	AluSx1	SINE,Alu
chr1	36770601	G	T	0.00055	THRAP3	+	FALSE	(T)n	SINE,Alu
chr9	17829	G	A	0.00142	WASH1	-	FALSE
chr1	53289759	A	G	0.00329	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	16891379	C	T	0.00074	NBPF1	-	FALSE
chr5	1317949	C	T	0.00173	CLPTM1L	-	FALSE
chr4	57326315	A	G	0.00281	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	44447006	T	C	0.00767	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr1	9329105	T	A	0.00233	H6PD	+	FALSE
chr1	1653093	A	G	0.00642	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr12	64842925	A	G	0.00345		.	FALSE	AluSz	SINE,Alu
chr1	16932429	C	G	0.00221	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr3	185009713	G	T	0.00106	MAP3K13	+	FALSE
chr3	12624763	T	C	1.62214E-06	MKRN2	+	FALSE
chr2	37329307	T	C	0.00137		.	FALSE	AluJr4	SINE,Alu
chr2	172412829	T	A	0.00477	CYBRD1	+	FALSE
chr6	42047553	A	G	0.00359	TAF8	+	TRUE	AluSz6	SINE,Alu
chr1	179326847	A	G	0.00021	SOAT1	+	TRUE	AluJo	SINE,Alu
chr2	167168093	C	T	0.00789	SCN9A	-	FALSE
chr2	32534897	A	G	0.00111		.	FALSE	AluSx1	SINE,Alu
chr1	67896025	G	A	5.77574E-06	SERBP1	-	FALSE
chr2	99813020	A	G	0.00015	MRPL30	+	TRUE	AluJb	SINE,Alu
chr16	10623688	T	C	0.00766	EMP2	-	TRUE	AluSp	SINE,Alu
chr4	6302519	G	A	0.00195	WFS1	+	FALSE
chr1	16935130	C	T	0.00155	NBPF1	-	FALSE
chr8	30536437	T	C	0.00062	GSR	-	FALSE	AluSp	SINE,Alu
chr1	1595006	T	C	1.43617E-06	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr20	62572487	A	C	0.00390	UCKL1	-	FALSE
chr1	20976075	T	C	0.00351	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	46075724	A	G	1.14407E-05	NASP	+	TRUE	AluSx4	SINE,Alu
chr15	85184816	T	C	3.05793E-06	WDR73,SCAND2P	+,-	FALSE	AluSz	SINE,Alu
chr2	101893247	C	A	0.00237	RNF149	-	FALSE	(A)n	SINE,Alu
chr1	95362953	T	C	0.00072	CNN3	-	FALSE
chr1	145311900	C	T	0.00286	NBPF20,NBPF10	+	FALSE
chr6	158613395	C	A	0.00031	GTF2H5	+	FALSE
chr1	3545194	C	G	0.00176	TPRG1L	+	FALSE
chr5	87566384	A	T	0.00584	TMEM161B-AS1	+	FALSE
chr1	45279898	C	T	0.00271		.	FALSE	(TCTT)n	SINE,Alu
chrX	123046302	A	G	0.00649	XIAP	+	TRUE	AluJb	SINE,Alu
chr6	38140503	C	T	0.00065	BTBD9	-	FALSE
chr1	144521099	A	G	0.00049	NBPF20	+	FALSE
chr1	179326908	A	G	0.00037	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	90401562	C	A	0.00057	LRRC8D	+	FALSE
chr9	140709880	C	T	0.00178	EHMT1	+	FALSE
chr12	133298349	A	G	0.00000	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	9328094	A	G	0.00107	H6PD	+	TRUE	AluJr	SINE,Alu
chr7	21941586	A	C	0.00016	CDCA7L	-	FALSE
chr1	121115958	T	C	0.00818	SRGAP2-AS1,SRGAP2D,SRGAP2B,SRGAP2C	+,-	FALSE
chr1	1717439	T	A	0.00663	GNB1	-	FALSE
chr2	86249906	T	C	0.00352	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	1650832	A	G	0.00263	CDK11B,CDK11A	-	FALSE
chr14	21929014	T	C	0.00749	RAB2B	-	TRUE	AluSp	SINE,Alu
chr6	108363821	T	C	0.00769	OSTM1	-	TRUE	AluJb	SINE,Alu
chr19	37073373	T	C	0.00492	ZNF529,ZNF529-AS1	+,-	FALSE	AluY	SINE,Alu
chr1	27533879	G	A	0.00877		.	FALSE
chr1	109535128	G	A	0.00063	WDR47	-	FALSE
chr1	40539213	A	G	0.00693	PPT1	-	FALSE
chr2	61277775	A	G	0.00113	PEX13	+	TRUE	AluY	SINE,Alu
chr1	1647902	A	T	0.00191	CDK11B,CDK11A	-	FALSE
chr1	16945227	G	T	0.00139	CROCCP2	-	FALSE
chr3	191114309	A	T	1.88175E-05	CCDC50	+	FALSE
chr5	179157298	T	G	0.00816	CANX	+	FALSE
chr8	144332082	T	C	7.73207E-05	ZFP41	+	FALSE
chr14	95555551	C	T	0.00404	DICER1	-	FALSE
chr8	128944717	G	T	0.00091	PVT1	+	FALSE
chr3	142776250	A	C	0.00926	U2SURP	+	FALSE
chr4	83406545	A	G	0.00156	TMEM150C	-	FALSE
chr3	25777072	C	T	4.38639E-06	NGLY1	-	FALSE	L1MEg	SINE,Alu
chr2	99812447	A	G	0.00587	MRPL30	+	TRUE	AluSx	SINE,Alu
chr2	109401285	G	A	0.00087	RANBP2	+	FALSE
chr1	203277245	G	A	0.00115	BTG2	+	FALSE
chr3	65341374	T	A	0.00029	MAGI1	-	FALSE
chr1	23636278	A	T	0.00442	HNRNPR	-	FALSE
chr5	56177848	T	A	0.00986	MAP3K1	+	FALSE
chr5	114951140	T	G	0.00761	TMED7-TICAM2,LOC101927100,TMED7	+,-	FALSE
chr1	40430967	G	T	0.00567	MFSD2A	+	FALSE
chr1	109465167	T	A	0.00233	GPSM2	+	FALSE
chr1	33148736	A	G	2.35913E-09	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	46076481	A	G	0.00144	NASP	+	TRUE	AluSx	SINE,Alu
chr1	11783106	A	G	0.00022		.	FALSE	AluSx	SINE,Alu
chr2	37330620	T	C	0.00216		.	FALSE	AluSq2	SINE,Alu
chr2	37431521	A	G	0.00783	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr1	11084103	T	A	0.00146	TARDBP	+	FALSE
chr1	19586501	A	G	2.56701E-06	MRTO4	+	TRUE	AluSz	SINE,Alu
chr3	15113893	T	C	0.00042	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	179310439	C	T	0.00907	SOAT1	+	FALSE
chr2	8823956	A	G	2.51922E-06	ID2	+	FALSE

RBP	SFPQ
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR782MXN
Platform	HiSeq
Pubmed ID	32252787

SFPQ - Target Gene Network