RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	19244904	G	A	0.00487	IFFO2	-	FALSE
chr1	156044213	G	T	7.72130E-05	MEX3A	-	FALSE	(T)n	SINE,Alu
chr1	93298516	A	G	0.00493	FAM69A,RPL5	+,-	FALSE
chr3	128339057	A	T	0.00535	RPN1	-	FALSE	(A)n	SINE,Alu
chr19	9673107	T	C	1.71894E-07		.	FALSE	AluSx3	SINE,Alu
chr11	65404866	T	G	0.00664	PCNX3	+	FALSE	(T)n	SINE,Alu
chr5	74072648	T	A	0.00036	NSA2	+	FALSE
chr1	40537924	G	A	0.00476	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	94353045	G	T	0.00351	GCLM	-	FALSE	AluSg	SINE,Alu
chr21	9908316	C	T	0.00719	TEKT4P2	-	FALSE
chr1	55317685	G	A	0.00121	DHCR24	-	FALSE	MIRb	SINE,Alu
chr8	48890293	A	G	0.00125	MCM4	+	TRUE	AluJb	SINE,Alu
chr1	3729587	A	G	0.00580	CEP104	-	FALSE	(AT)n	SINE,Alu
chr3	196670094	G	C	0.00669	NCBP2-AS2	+	FALSE
chr1	32799435	A	T	0.00515	MARCKSL1	-	FALSE
chr3	9848222	A	T	0.00083	ARPC4,ARPC4-TTLL3	+	FALSE
chr1	32385070	T	A	0.00593	PTP4A2	-	FALSE
chr1	28835937	A	G	0.00121	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	19542455	T	C	0.00048	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	19934793	G	A	0.00068	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr3	56763316	G	A	0.00830	ARHGEF3	-	FALSE
chr1	1469546	G	A	0.00300	ATAD3A	+	FALSE
chrX	123046741	A	G	0.00169	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	115299508	A	T	0.00070	CSDE1	-	FALSE
chr1	172410967	G	A	1.85684E-05	C1orf105,PIGC	+,-	FALSE
chr12	124146100	A	G	4.66106E-08	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr1	160967816	T	C	0.00025	F11R	-	TRUE	AluSp	SINE,Alu
chr8	145159718	G	C	0.00409	MAF1	+	FALSE
chr4	17804785	T	C	0.00083	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	19585771	A	G	0.00029	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr1	115313028	T	A	0.00448	SIKE1	-	FALSE	AluSx1	SINE,Alu
chr7	6501830	G	A	0.00110	KDELR2	-	FALSE
chr1	153609268	G	A	0.00263	CHTOP	+	FALSE
chr1	36322433	G	A	0.00663	AGO4	+	FALSE
chr12	64842920	A	G	2.84792E-05		.	FALSE	AluSz	SINE,Alu
chr7	4809333	A	G	0.00067	FOXK1	+	TRUE	AluSx1	SINE,Alu
chr1	45244411	C	A	0.00656	RPS8	+	FALSE
chr1	20945055	C	T	0.00269	CDA	+	FALSE
chr8	23049112	T	C	0.00774	TNFRSF10A	-	TRUE
chr6	105546950	T	C	0.00443	BVES	-	TRUE	AluJb	SINE,Alu
chr1	28661718	A	G	0.00520	MED18	+	TRUE	AluSg	SINE,Alu
chr1	206566195	C	T	7.54522E-05	SRGAP2	+	FALSE
chr1	33145958	G	T	0.00080	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chr2	218696215	A	G	0.00915	TNS1	-	FALSE
chr4	2940397	T	C	0.00010	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr17	73940077	T	C	0.00146	ACOX1	-	TRUE	AluJb	SINE,Alu
chr5	34906750	T	C	0.00527	RAD1	-	TRUE	AluJo	SINE,Alu
chr3	40503554	A	C	0.00197	RPL14	+	FALSE
chr1	6257826	T	C	0.00192	RPL22	-	FALSE
chr1	16861718	C	T	0.00891	LOC100132147	-	FALSE
chr1	16933110	T	C	0.00821	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	19578192	G	A	0.00778	MRTO4	+	FALSE
chr1	85785552	T	C	0.00334	DDAH1	-	FALSE
chr3	52237970	C	T	0.00017	ALAS1	+	FALSE
chr1	46076533	A	G	1.88265E-05	NASP	+	TRUE	AluSx	SINE,Alu
chr3	196558949	A	G	6.63189E-10	PAK2	+	FALSE
chr16	2821989	C	T	0.00709	TCEB2	-	FALSE
chr2	206986972	T	C	0.00462		.	FALSE	AluJr	SINE,Alu
chr1	10517313	T	C	0.00661		.	FALSE	AluJr	SINE,Alu
chr1	16958047	C	T	0.00193		.	FALSE
chr1	168218522	A	G	0.00073		.	FALSE	AluSz	SINE,Alu
chr3	10193358	A	G	0.00765	VHL	+	TRUE	L1ME4a	SINE,Alu
chr1	3395039	G	A	0.00027	ARHGEF16	+	FALSE
chr4	89180334	T	C	0.00224	PPM1K	-	TRUE	AluSx4	SINE,Alu
chr2	158636910	G	A	0.00160	ACVR1	-	FALSE
chr3	10290508	C	T	0.00682	TATDN2	+	FALSE
chr6	42854580	A	G	0.00330	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr1	1419752	A	G	7.69134E-06	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr4	87846547	T	C	0.00250	LOC100506746	-	TRUE	AluSz6	SINE,Alu
chr1	23833608	G	A	0.00890	E2F2	-	FALSE
chr1	150446028	G	T	0.00624	RPRD2	+	FALSE
chr1	10520296	T	C	0.00108		.	FALSE	AluSx	SINE,Alu
chr1	1469546	G	A	0.00331	ATAD3A	+	FALSE
chr2	110373938	T	G	0.00413	SOWAHC	+	FALSE	(GAAT)n	SINE,Alu
chr1	154554950	G	T	0.00599	ADAR	-	FALSE
chr2	114356336	C	T	0.00680	WASH2P	+	FALSE
chr1	44447004	G	A	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr1	121134169	A	T	0.00660	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	(TTTCCT)n	SINE,Alu
chr1	113511408	A	G	0.00738		.	FALSE	AluY	SINE,Alu
chr1	19542456	T	C	0.00135	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	86979093	G	A	0.00591	RMND5A	+	FALSE
chr1	36529575	A	G	2.40551E-05		.	FALSE	AluJr	SINE,Alu
chr3	192515557	G	A	0.00130	MB21D2	-	FALSE
chr1	146740502	C	G	0.00692	CHD1L	+	FALSE
chr15	90820171	A	G	0.00185		.	FALSE
chr1	31905905	G	C	0.00028	SERINC2	+	FALSE
chr6	31324110	G	A	0.00521		.	FALSE
chr1	16901668	T	C	0.00177	NBPF1	-	FALSE
chr16	81064611	A	G	0.00075	CENPN	+	TRUE	AluSg	SINE,Alu
chr4	53364	G	A	0.00714	ZNF718,ZNF595	+	FALSE
chr1	6683581	A	C	0.00504	PHF13	+	FALSE
chr3	183861750	A	C	1.09807E-05	EIF2B5	+	FALSE
chr1	47133835	C	A	1.43471E-05	ATPAF1	-	FALSE
chr1	160967856	T	C	0.00027	F11R	-	TRUE	AluSp	SINE,Alu
chr1	10517352	T	C	0.00983		.	FALSE	AluJr	SINE,Alu
chr12	69237507	A	G	0.00889	MDM2	+	TRUE
chr11	68523472	T	C	0.00649	CPT1A	-	TRUE	AluSq	SINE,Alu
chr1	113243096	G	T	0.00114	MOV10	+	FALSE
chr1	19665310	C	T	0.00618	CAPZB	-	FALSE	(TTTCT)n	SINE,Alu
chr2	201842391	T	C	0.00081	FAM126B	-	TRUE	AluJb	SINE,Alu
chr8	12880246	A	G	0.00012	KIAA1456	+	TRUE	AluJo	SINE,Alu
chr1	179042692	A	G	0.00707	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr2	188330198	C	A	0.00091	TFPI	-	FALSE	AluJb	SINE,Alu
chr8	23087535	A	G	0.00491	LOC389641	+	FALSE	AluSx1	SINE,Alu
chr19	42375564	A	G	0.00117		.	FALSE	AluSx	SINE,Alu
chr1	145689537	A	G	0.00341	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr15	33064465	C	G	0.00735	FMN1	-	FALSE
chr1	1650832	A	G	0.00065	CDK11B,CDK11A	-	FALSE
chr1	179326847	A	G	0.00512	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	214557685	C	A	0.00205	PTPN14	-	FALSE
chr20	46284868	A	T	0.00681	NCOA3	+	FALSE
chr1	40537924	G	A	0.00245	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	45452227	G	C	0.00046	EIF2B3	-	FALSE
chr1	92862682	A	G	0.00381		.	FALSE	AluJr	SINE,Alu
chr1	144828688	C	T	0.00024	NBPF20,NBPF9	+	FALSE
chr1	10367424	G	A	0.00286	KIF1B	+	FALSE	AluSx	SINE,Alu
chr1	26161104	C	A	0.00030	AUNIP	-	FALSE	AluSc8	SINE,Alu
chr1	16890598	T	A	0.00428	NBPF1	-	FALSE
chr2	8823954	G	A	7.64310E-06	ID2	+	FALSE
chr1	145369589	T	C	0.00046	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr2	176791250	T	C	0.00078	LNPK	-	TRUE	MSTD	SINE,Alu
chr4	57326329	A	G	0.00077	PAICS	+	TRUE	AluJr	SINE,Alu
chr6	160113872	A	G	0.00863	SOD2	-	FALSE
chr1	26188238	G	A	0.00148	PAQR7	-	FALSE	AluSp	SINE,Alu
chr2	74333235	C	T	0.00022	TET3	+	FALSE
chr2	42577806	T	A	0.00276	COX7A2L	-	FALSE
chr1	9329105	T	A	0.00233	H6PD	+	FALSE
chr3	99463810	G	T	0.00496	MIR548G,COL8A1	+,-	FALSE
chr2	272203	C	T	1.58440E-08	ACP1	+	FALSE
chr1	28661633	A	G	0.00053	MED18	+	TRUE	AluSg	SINE,Alu
chr1	19543456	T	C	0.00451	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr19	46289409	C	T	6.23760E-05	DMWD	-	FALSE
chr2	178129405	C	T	0.00295	NFE2L2	-	FALSE	(CGG)n	SINE,Alu
chr1	161929879	A	T	0.00680	ATF6	+	FALSE
chr1	15904318	C	T	9.04121E-06	AGMAT	-	FALSE
chr5	21883662	T	G	0.00108	CDH12	-	FALSE
chr5	61683960	A	G	0.00491		.	FALSE
chr1	159946783	A	G	0.00097	LINC01133	+	FALSE	(GAAA)n	SINE,Alu
chr4	128756628	A	G	0.00011		.	FALSE	AluSx	SINE,Alu
chr2	10194192	T	C	0.00715	KLF11	+	FALSE
chr2	204300093	A	C	0.00105	RAPH1	-	FALSE	FLAM_C	SINE,Alu
chr3	62282908	C	T	0.00281	PTPRG-AS1	-	FALSE
chr3	15113694	T	C	0.00622	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	40214296	A	G	0.00485	PPIE	+	TRUE	AluSq2	SINE,Alu
chr1	1245164	C	T	0.00318	PUSL1	+	FALSE
chr1	27107650	T	A	3.71504E-05	ARID1A	+	FALSE
chr9	131872852	G	C	0.00064	CRAT	-	FALSE
chr1	236702210	A	G	0.00153	LGALS8	+	FALSE
chr1	54412181	T	C	0.00524	LRRC42	+	FALSE
chr1	10520532	T	C	0.00142		.	FALSE	AluSx1	SINE,Alu
chr1	6283305	T	C	0.00129	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	87002706	G	A	0.00178	RMND5A	+	FALSE
chr4	119952955	C	T	0.00278	SYNPO2	+	FALSE
chr1	145688664	A	T	0.00298	NBPF20,NBPF10,RNF115	+	FALSE
chr1	150704483	T	C	0.00028	CTSS	-	TRUE	AluJo	SINE,Alu
chr2	37328034	T	C	0.00035		.	FALSE
chr3	56654248	T	G	3.99921E-06	CCDC66,FAM208A	+,-	FALSE
chr2	161130868	A	C	0.00297	RBMS1	-	FALSE
chr2	99812289	A	G	0.00282	MRPL30	+	TRUE	AluSx	SINE,Alu
chr17	4574751	T	A	0.00246	PELP1	-	FALSE
chr2	37331855	C	T	0.00965		.	FALSE	L1MC4	SINE,Alu
chr1	201299882	T	G	0.00145	PKP1	+	FALSE
chr1	28825331	A	G	0.00051	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr2	37331546	T	C	0.00936		.	FALSE	AluJb	SINE,Alu
chr17	49042216	T	C	0.00746	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	10521172	T	C	0.00178	DFFA	-	TRUE	AluY	SINE,Alu
chr12	56215103	A	T	0.00353	DNAJC14	-	FALSE
chr3	15115284	G	A	0.00305	RBSN	-	FALSE
chr5	157184013	A	G	0.00631	LSM11	+	TRUE	AluY	SINE,Alu
chr2	242384528	G	T	2.14488E-07	FARP2	+	FALSE	AluJr	SINE,Alu
chr1	1152309	A	T	0.00035	SDF4	-	FALSE
chr1	93826819	A	T	0.00086	DR1	+	FALSE	(GTTTT)n	SINE,Alu
chr1	100549600	G	T	0.00181	SASS6	-	FALSE
chr1	9331101	A	G	0.00072	H6PD	+	FALSE	AluSx	SINE,Alu
chr1	44447006	T	C	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr1	19420619	C	G	0.00339	UBR4	-	FALSE
chr1	1597403	C	T	0.00015	CDK11B,SLC35E2B	-	FALSE
chr1	45671429	G	A	0.00054	ZSWIM5	-	FALSE
chr1	65898269	C	T	0.00399	LEPR,LEPROT	+	FALSE	MIRc	SINE,Alu
chr1	19542310	T	C	0.00582	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr17	45761109	T	G	0.00018		.	FALSE
chr3	15113681	T	C	0.00048	RBSN	-	TRUE	AluSz6	SINE,Alu
chr11	65179817	T	C	0.00599	FRMD8	+	FALSE
chr2	1636938	C	T	0.00072	PXDN	-	FALSE	(T)n	SINE,Alu
chr2	24223159	A	G	0.00717	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	118166096	C	T	0.00861	FAM46C	+	FALSE
chr1	120163518	C	T	0.00646	ZNF697	-	FALSE
chr1	53289688	A	G	0.00059	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	16889624	T	C	0.00614	NBPF1	-	TRUE
chr1	1594498	C	T	0.00024	CDK11B,SLC35E2B	-	FALSE
chr1	6681836	G	A	5.48259E-05	PHF13	+	FALSE
chr1	118066724	A	T	0.00979	MAN1A2	+	FALSE
chr6	107113955	A	G	0.00265	QRSL1	+	TRUE	AluSg	SINE,Alu
chr1	16912099	G	C	0.00928	NBPF1	-	FALSE
chr2	204162036	A	G	0.00369	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr5	6748659	T	C	0.00032	PAPD7	+	FALSE
chr5	140025058	G	T	0.00392	NDUFA2	-	FALSE
chr1	173860808	A	G	0.00042		.	FALSE	FLAM_A	SINE,Alu
chr3	10192617	A	G	2.94246E-06	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	161488401	T	A	0.00622	FCGR2A	+	FALSE
chr17	46941448	G	T	0.00017	CALCOCO2	+	FALSE	AluSz6	SINE,Alu
chr1	179044110	A	G	0.00931	FAM20B	+	TRUE	AluSx	SINE,Alu
chr3	105258861	A	G	0.00030	ALCAM	+	FALSE
chr10	129910475	T	G	0.00061	MKI67	-	FALSE
chr1	1252662	T	C	0.00136	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	16912085	T	C	0.00206	NBPF1	-	FALSE
chr1	148003749	T	C	0.00050	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr2	233199107	C	T	0.00675	DIS3L2	+	FALSE
chr1	16921146	T	C	0.00382	NBPF1	-	FALSE
chr1	28826023	A	G	0.00143	PHACTR4	+	FALSE	AluJb	SINE,Alu
chr2	132481529	C	T	0.00028	C2orf27A	+	FALSE
chr1	145512014	A	G	0.00370	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	113672616	A	G	0.00940		.	FALSE	AluJb	SINE,Alu
chr3	45721891	A	G	0.00163	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	8045340	C	A	0.00056	PARK7	+	FALSE
chr7	38765149	C	T	0.00785	VPS41	-	FALSE
chr1	23409538	G	A	0.00292	KDM1A	+	FALSE
chr4	1305799	C	T	0.00271	MAEA	+	FALSE
chr2	174086933	C	A	0.00457	ZAK,MLK7-AS1	+,-	FALSE	AluJo	SINE,Alu
chr1	225974581	A	G	0.00732	SRP9	+	TRUE	AluJr	SINE,Alu
chr1	36068295	T	C	2.11660E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr4	128756738	A	G	0.00408		.	FALSE	AluSx	SINE,Alu
chr1	36032229	A	C	0.00806	NCDN	+	FALSE
chr2	27001973	C	T	0.00327	SLC35F6	+	FALSE	AluSx	SINE,Alu
chr2	99992822	A	C	0.00266	EIF5B	+	FALSE
chr1	79003523	C	G	0.00036	PTGFR	+	FALSE
chr1	1361641	C	T	0.00928	TMEM88B	+	FALSE
chr1	6354955	G	A	0.00090	ACOT7	-	FALSE
chr1	12628188	T	C	3.43513E-08	DHRS3	-	FALSE
chr1	156613401	T	C	5.47226E-05	BCAN	+	FALSE
chr19	7084578	A	G	0.00346	ZNF557	+	TRUE	AluJb	SINE,Alu
chr1	33086758	T	C	0.00818		.	FALSE	AluY	SINE,Alu
chr3	10193797	A	G	0.00261	VHL	+	TRUE	AluSx	SINE,Alu
chr5	122359498	A	C	0.00038	PPIC	-	FALSE	(AC)n	SINE,Alu
chr1	144922523	C	T	0.00566	NBPF20,PDE4DIP	+,-	FALSE
chr1	46032974	T	C	0.00196	AKR1A1	+	FALSE
chr1	19542631	T	C	0.00031	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr1	67874696	T	C	0.00839	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	155660279	A	G	0.00594		.	FALSE
chr6	71298815	T	A	0.00287		.	FALSE
chr2	24225006	A	G	0.00078		.	FALSE	AluSx	SINE,Alu
chr1	19578192	G	A	0.00246	MRTO4	+	FALSE
chr1	16932144	A	C	0.00559	NBPF1	-	FALSE
chr1	145369007	T	G	0.00703	NBPF20,NBPF10	+	FALSE
chr1	1255401	G	T	0.00216	CPSF3L	-	FALSE	(GCAGG)n	SINE,Alu
chr17	38438362	G	A	0.00016	WIPF2	+	FALSE	A-rich	SINE,Alu
chr1	143399198	C	T	0.00146		.	FALSE
chr2	120022385	C	T	0.00184	STEAP3	+	FALSE
chr11	86646405	C	A	9.05139E-05	PRSS23	+	FALSE	L2b	SINE,Alu
chr1	86118685	G	A	0.00440	ZNHIT6	-	FALSE
chr1	46076467	A	G	0.00475	NASP	+	TRUE	AluSx	SINE,Alu
chr1	110466466	T	C	0.00377	CSF1	+	FALSE
chr20	25428617	A	G	0.00622	GINS1	+	FALSE	AluJb	SINE,Alu
chr1	94342564	C	A	0.00098	DNTTIP2	-	FALSE
chr12	990912	A	C	0.00244	WNK1	+	FALSE
chr1	90401416	T	C	6.95799E-05	LRRC8D	+	FALSE
chr1	201846675	C	T	0.00145	IPO9	+	FALSE
chr1	16112795	A	G	0.00106	FBLIM1	+	FALSE
chr1	10521254	T	C	0.00522	DFFA	-	TRUE	AluY	SINE,Alu
chr2	1637648	T	C	9.03854E-11	PXDN	-	FALSE
chr7	105162562	G	C	0.00096	PUS7	-	FALSE
chr3	195412864	G	A	0.00725	SDHAP2	+	FALSE
chr1	33149363	A	G	0.00237	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr19	24103951	A	G	0.00082	ZNF726	+	TRUE	AluSg4	SINE,Alu
chr15	45366812	A	G	0.00446	SORD	+	FALSE
chr1	201438097	G	C	2.75480E-05	PHLDA3	-	FALSE
chr2	188385337	C	T	0.00210	TFPI	-	FALSE	L1MC3	SINE,Alu
chr2	102793246	A	G	0.00904	IL1R1	+	FALSE
chr3	10192633	A	G	8.20807E-06	VHL	+	TRUE	AluSx1	SINE,Alu
chr12	69237053	A	G	0.00331	MDM2	+	TRUE
chr11	75116734	C	A	0.00453	RPS3	+	FALSE
chr19	21302045	A	G	0.00020	ZNF714	+	TRUE	AluSg4	SINE,Alu
chr6	38140503	C	T	0.00065	BTBD9	-	FALSE
chr2	56611541	G	A	0.00521	CCDC85A	+	FALSE
chr1	1152310	C	T	0.00862	SDF4	-	FALSE
chr3	14183410	T	C	1.62266E-06	TMEM43	+	FALSE
chr1	32799439	C	T	0.00239	MARCKSL1	-	FALSE
chr19	58420152	C	A	0.00322	ZNF417	-	FALSE
chr1	40539213	A	G	0.00693	PPT1	-	FALSE
chr3	40578935	A	G	0.00063	ZNF621	+	TRUE	AluJr	SINE,Alu
chr2	172179003	T	C	0.00192	METTL8	-	TRUE	AluY	SINE,Alu
chr3	10290515	G	A	0.00904	TATDN2	+	FALSE
chr14	20940606	G	A	0.00710	PNP	+	FALSE
chr2	233744021	G	A	0.00460	NGEF	-	FALSE
chr1	46033514	G	A	0.00073	AKR1A1	+	FALSE	AluYk3	SINE,Alu
chr1	145512098	A	G	0.00707	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr19	13054924	A	C	0.00982	CALR	+	FALSE
chr2	152976703	T	A	0.00217	STAM2	-	FALSE
chr1	113000565	A	G	0.00216	CTTNBP2NL	+	FALSE
chr1	16933658	G	A	0.00699	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	51822219	G	A	0.00325	EPS15	-	FALSE
chr9	28607	T	C	0.00146	WASH1	-	FALSE
chr7	102016322	A	G	0.00223	LOC100289561,LOC100630923	+	FALSE
chr1	54382632	T	C	0.00219		.	FALSE	AluSq2	SINE,Alu
chr16	2553869	A	T	0.00089	TBC1D24	+	FALSE
chr1	12677525	G	A	0.00122	DHRS3	-	FALSE	(A)n	SINE,Alu
chr2	99772827	A	G	0.00377	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr3	125248838	A	T	0.00899	OSBPL11	-	FALSE
chr11	769459	T	C	0.00082	PDDC1	-	TRUE	AluSq2	SINE,Alu
chr1	100659985	T	C	0.00600	DBT	-	FALSE	AluSx3	SINE,Alu
chr2	9629306	G	T	0.00255	ADAM17	-	FALSE
chr1	10517513	T	C	0.00088		.	FALSE	AluSx1	SINE,Alu
chr1	206579798	T	C	0.00476	SRGAP2	+	FALSE
chr1	28836975	A	G	0.00202	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	9163393	T	C	0.00327		.	FALSE	AluSp	SINE,Alu
chr1	23240255	G	A	0.00873	EPHB2	+	FALSE
chr2	206480819	C	T	0.00663	PARD3B	+	FALSE
chr2	204301753	T	A	0.00012	RAPH1	-	FALSE
chr2	32532809	A	G	0.00255		.	FALSE	AluSx1	SINE,Alu
chr16	75479467	T	C	0.00160	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	40974799	T	C	0.00038	EXO5	+	FALSE
chr1	64114301	T	C	0.00955	PGM1	+	FALSE
chr7	72480095	A	G	0.00590	PMS2P2	+	FALSE
chr1	149818472	T	C	0.00131		.	FALSE	MLT1D	SINE,Alu
chr1	33086876	T	C	0.00399	ZBTB8OS	-	TRUE	AluY	SINE,Alu
chr1	207943211	G	A	0.00248	CD46	+	FALSE	AluSx1	SINE,Alu
chr7	102004748	T	C	0.00050	LOC100289561,LOC100630923	+	FALSE
chr1	227071525	C	T	0.00085	PSEN2	+	FALSE
chr6	44222156	A	T	0.00856	SLC35B2	-	FALSE
chr1	114940227	T	C	0.00852	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	16112795	A	G	4.56234E-06	FBLIM1	+	FALSE
chr1	155695998	A	G	0.00574	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	179829595	T	C	0.00115	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	10517527	T	C	8.32015E-05		.	FALSE	AluSx1	SINE,Alu
chr9	136209399	A	T	0.00011	MED22	-	FALSE
chr4	129795672	C	A	0.00284	JADE1	+	FALSE
chr4	190873405	C	T	0.00325	FRG1	+	FALSE
chr17	74710572	T	C	0.00594	JMJD6	-	FALSE
chr17	46803538	C	T	0.00492	HOXB13	-	FALSE
chr5	96110544	T	C	0.00295	ERAP1	-	TRUE
chr1	19543253	T	C	0.00202	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	156692052	T	A	0.00369	ISG20L2	-	FALSE	AluY	SINE,Alu
chr2	238678002	C	G	0.00711	LRRFIP1	+	FALSE
chr3	15114486	T	C	3.99101E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr1	203711876	G	A	0.00444	ATP2B4	+	FALSE
chr1	59120961	G	A	0.00383	MYSM1	-	FALSE
chr17	74556011	A	G	0.00819	SNHG16	+	TRUE	AluSq2	SINE,Alu
chr1	179813613	T	C	0.00595	TOR1AIP2	-	FALSE
chr1	148556726	G	T	0.00023		.	FALSE
chr1	100654769	T	C	0.00318	DBT	-	TRUE	AluSz	SINE,Alu
chr1	36067760	T	C	0.00021	PSMB2	-	TRUE	AluSz	SINE,Alu
chr17	46025078	A	G	0.00021	PNPO	+	TRUE	AluSc	SINE,Alu
chr2	74332837	G	T	4.72839E-05	TET3	+	FALSE
chr2	129024313	A	G	0.00612	HS6ST1	-	FALSE
chr16	80636808	C	T	0.00881	CDYL2	-	FALSE
chr3	81539382	C	T	1.63276E-05	GBE1	-	FALSE
chr6	143382534	C	T	0.00252	AIG1	+	FALSE
chr2	161130521	G	A	0.00454	RBMS1	-	FALSE
chr1	1534205	G	A	1.69659E-11	FNDC10	-	FALSE
chr1	1650832	A	G	0.00241	CDK11B,CDK11A	-	FALSE
chr3	24019990	A	G	0.00308	NR1D2	+	FALSE
chr12	124105948	C	T	0.00778	EIF2B1	-	FALSE
chr1	1419823	A	G	0.00816	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	177976440	C	T	0.00148	LOC730102	-	FALSE
chr10	98281496	T	C	0.00509	TM9SF3	-	FALSE
chr1	16944953	T	G	0.00158	CROCCP2	-	FALSE
chr7	138764145	T	C	0.00399	ZC3HAV1	-	FALSE
chr2	187544234	C	T	0.00078	ITGAV	+	FALSE
chr3	88205579	G	T	2.47620E-05	C3orf38	+	FALSE
chr7	64435683	T	A	0.00239	ZNF117	-	FALSE
chr9	102977295	C	T	3.70755E-05	INVS	+	FALSE	HERVL40-int	SINE,Alu
chr1	25570562	T	A	0.00028	RSRP1	-	FALSE	Alu	SINE,Alu
chr2	174086940	C	A	0.00047	ZAK,MLK7-AS1	+,-	FALSE	AluJo	SINE,Alu
chr1	38174665	G	A	0.00339	CDCA8	+	FALSE
chr1	28835847	A	G	5.60567E-05	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	116609833	G	A	0.00773	SLC22A15	+	FALSE
chr1	54355105	A	G	0.00325	YIPF1	-	FALSE	MIRb	SINE,Alu
chr1	1595604	A	T	0.00233	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr4	2940147	T	C	0.00061	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	9326888	T	C	0.00887	H6PD	+	FALSE	AluSx1	SINE,Alu
chr3	124948049	T	C	0.00709	ZNF148	-	TRUE
chr4	140394600	G	A	0.00950	RAB33B	+	FALSE
chr18	6986227	G	A	3.73397E-05	LAMA1	-	FALSE
chr6	150046603	T	C	0.00730	NUP43	-	TRUE	AluSq2	SINE,Alu
chr1	16861804	G	A	0.00903	LOC100132147	-	FALSE	tRNA-Glu-GAA	SINE,Alu
chr1	145441843	G	A	0.00744	NBPF20,NBPF10,TXNIP	+	FALSE
chr3	122283290	G	C	0.00029	DTX3L,PARP9	+,-	FALSE
chr1	10520296	T	C	0.00299		.	FALSE	AluSx	SINE,Alu
chr2	73301687	G	A	0.00618	RAB11FIP5	-	FALSE
chr15	43767774	G	C	0.00057	TP53BP1	-	FALSE
chr4	178256913	C	G	4.41796E-05	NEIL3	+	FALSE
chr3	52289298	G	T	0.00059	WDR82	-	FALSE
chr1	10044366	A	G	0.00531	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr3	57743171	C	T	1.04824E-07	SLMAP	+	FALSE
chr2	37329347	T	C	0.00155		.	FALSE	AluJr4	SINE,Alu
chr19	37073373	T	C	0.00492	ZNF529,ZNF529-AS1	+,-	FALSE	AluY	SINE,Alu
chr1	32373563	G	A	0.00089	PTP4A2	-	FALSE
chr17	57279258	A	G	0.00095	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	89518120	A	G	0.00453	GBP1	-	FALSE
chr17	27586605	G	A	0.00053	NUFIP2	-	FALSE
chr1	15993699	C	A	0.00011		.	FALSE	AluSx4	SINE,Alu
chr12	56510704	G	A	0.00042	RPL41	+	FALSE
chr4	17802772	G	T	0.00328	DCAF16	-	FALSE	AluSz	SINE,Alu
chr1	1595388	A	G	0.00135	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr15	65442592	T	C	8.95444E-05	CLPX	-	TRUE	AluSg4	SINE,Alu
chr4	7764131	A	T	5.82585E-11	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	10521103	T	C	0.00788	DFFA	-	TRUE	AluY	SINE,Alu
chr3	194789330	G	T	0.00699	XXYLT1	-	FALSE	AluJr	SINE,Alu
chr1	207247477	T	C	2.68116E-05	PFKFB2	+	FALSE	MER5B	SINE,Alu
chr2	206988452	A	T	0.00669	NDUFS1	-	FALSE
chr2	128620436	C	T	0.00342	AMMECR1L	-	FALSE
chr1	19954014	G	T	0.00055	MINOS1,MINOS1-NBL1	+	FALSE	L2c	SINE,Alu
chr2	143638993	C	G	0.00016	KYNU	+	FALSE
chr2	37330343	C	T	0.00055		.	FALSE	AluSq2	SINE,Alu
chr21	34728099	A	G	1.57787E-05	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr1	179044110	A	G	0.00885	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	89648082	G	A	0.00074	GBP4	-	FALSE	LTR2B	SINE,Alu
chr1	24296869	G	T	0.00973		.	FALSE	AluSg	SINE,Alu
chr17	5377119	A	T	0.00043	DERL2	-	FALSE	FLAM_C	SINE,Alu
chr1	78414285	T	A	0.00256	FUBP1	-	FALSE
chr2	114352238	G	A	1.72390E-05	WASH2P	+	FALSE

RBP	NSUN2
Knock-Method	shRNA
RBP Family	Methyltr_RsmB-F
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR629RUG
Platform	HiSeq
Pubmed ID	32252787

NSUN2 - Target Gene Network