RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	156259229	T	C	0.00225	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	28836974	A	G	9.88453E-07	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr5	72801321	T	A	0.00212	BTF3	+	FALSE
chr1	222713503	C	G	0.00860	HHIPL2	-	FALSE
chr1	19542250	T	C	9.94571E-09	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	31732603	A	C	0.00164	SNRNP40	-	FALSE
chr1	16933642	G	A	0.00679	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	9416151	G	A	0.00292	SPSB1	+	FALSE
chr2	69688917	T	C	0.00254	AAK1	-	TRUE	AluSq2	SINE,Alu
chr1	120163518	C	T	0.00646	ZNF697	-	FALSE
chr8	145159709	C	A	0.00314	MAF1	+	FALSE
chr3	69151152	C	A	0.00750	ARL6IP5	+	FALSE
chr1	21100856	A	C	0.00010	HP1BP3	-	FALSE	(AC)n	SINE,Alu
chr1	38478446	C	G	4.10892E-09	UTP11	+	FALSE
chr1	10521170	T	C	0.00498	DFFA	-	TRUE	AluY	SINE,Alu
chr20	18469048	T	C	0.00213	RBBP9	-	TRUE	AluJr	SINE,Alu
chr1	16889566	T	C	0.00305	NBPF1	-	TRUE
chr3	17201882	C	T	0.00259	TBC1D5	-	FALSE
chr6	42856029	A	G	7.18756E-05	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr2	20648145	A	C	3.92667E-06	RHOB	+	FALSE
chr1	1636355	A	G	0.00857	CDK11B,CDK11A	-	FALSE
chr17	27586605	G	A	0.00053	NUFIP2	-	FALSE
chr1	150937771	T	A	0.00026	CERS2	-	FALSE	(ATTTTTT)n	SINE,Alu
chr1	144595935	G	A	0.00860	NBPF20	+	FALSE	AluJb	SINE,Alu
chr5	125961648	A	G	4.28370E-08	PHAX	+	FALSE	AluSz6	SINE,Alu
chr17	73819348	T	C	0.00213	UNK	+	FALSE
chr1	157092836	G	A	0.00383		.	FALSE
chr1	1650832	A	G	0.00263	CDK11B,CDK11A	-	FALSE
chr3	195963399	G	A	0.00341		.	FALSE
chr11	64084160	C	T	0.00895	ESRRA,TRMT112	+,-	FALSE
chr12	124146100	A	G	4.66106E-08	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr1	204526713	A	G	0.00078	MDM4	+	TRUE	AluSx	SINE,Alu
chr9	117050998	G	A	0.00326	COL27A1	+	FALSE
chr2	17942775	T	A	0.00367	GEN1	+	FALSE
chr2	99812817	A	G	0.00201	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	53366673	A	G	0.00243	ECHDC2	-	FALSE	AluJb	SINE,Alu
chr1	19420619	C	G	0.00339	UBR4	-	FALSE
chr1	100440553	A	G	0.00179	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr1	11347150	C	A	0.00016	UBIAD1	+	FALSE
chr4	140394600	G	A	0.00950	RAB33B	+	FALSE
chr1	70728523	A	G	0.00051	ANKRD13C	-	FALSE
chr7	2473753	C	T	0.00806	CHST12	+	FALSE	(CCGC)n	SINE,Alu
chr4	2940347	T	C	1.36349E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr7	100031495	C	T	0.00475	MEPCE	+	FALSE
chr1	46075715	A	G	0.00058	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	1594940	T	C	0.00115	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr4	108834529	G	T	1.01126E-06	SGMS2,LOC101929595	+,-	FALSE
chr1	16932809	C	T	0.00074	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	53712727	C	T	0.00313	LRP8	-	FALSE
chr1	10518921	C	T	0.00398		.	FALSE	AluSx3	SINE,Alu
chr4	39550978	T	C	3.11849E-06	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	19542463	T	C	0.00182	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	144823139	G	A	0.00941	NBPF20,NBPF9	+	FALSE
chr5	145666109	A	T	0.00728	RBM27	+	FALSE
chr20	25428588	A	G	0.00068	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	1152309	A	T	0.00035	SDF4	-	FALSE
chr1	2522392	G	A	0.00227	FAM213B,MMEL1	+,-	FALSE
chr1	172411496	A	G	0.00361	C1orf105,PIGC	+,-	FALSE
chr1	10043053	A	G	0.00318	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	6583538	T	C	0.00455	NOL9	-	TRUE	AluSq	SINE,Alu
chr4	129924977	C	A	0.00760	SCLT1	-	FALSE
chr3	196670092	C	G	0.00393	NCBP2-AS2	+	FALSE
chr19	3467756	C	T	0.00485	NFIC	+	FALSE	(TA)n	SINE,Alu
chr1	31405707	G	T	0.00431	PUM1	-	FALSE
chr3	49315588	T	G	0.00182	USP4	-	FALSE
chr17	49042386	T	C	4.28426E-05	SPAG9	-	TRUE	AluJb	SINE,Alu
chrX	16781156	A	G	0.00061		.	FALSE	AluJo	SINE,Alu
chr14	20923558	A	C	0.00373	APEX1	+	FALSE
chr2	219100706	A	G	0.00874	ARPC2	+	TRUE	AluSx1	SINE,Alu
chr2	101638888	A	G	0.00127	TBC1D8	-	FALSE
chr2	191224981	G	T	0.00245	INPP1	+	FALSE
chr1	38327542	T	C	0.00068	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr3	99517466	G	A	0.00088	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr1	36068276	T	C	0.00110	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	16912015	G	A	0.00092	NBPF1	-	FALSE
chr1	10520331	C	T	0.00527		.	FALSE	AluSx1	SINE,Alu
chr5	118174855	T	C	1.06010E-07	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	33149333	A	G	0.00980	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	16953672	C	T	0.00243	CROCCP2	-	FALSE
chr8	41399722	A	G	0.00065	LOC102723729,GINS4	+,-	FALSE	AluSx3	SINE,Alu
chr1	20976759	C	T	2.31016E-05	PINK1,PINK1-AS	+,-	FALSE
chr3	42591956	G	A	0.00503	SEC22C	-	FALSE
chr1	120539711	G	T	0.00627	NOTCH2	-	FALSE
chr1	28662105	A	G	0.00846	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	113672640	A	G	0.00629		.	FALSE	AluJb	SINE,Alu
chr2	11321779	A	T	0.00033	ROCK2	-	FALSE	AluSx1	SINE,Alu
chr14	103372465	C	A	0.00600	TRAF3	+	FALSE	(AC)n	SINE,Alu
chr6	24720533	C	G	0.00023		.	FALSE
chr15	33064465	C	G	0.00735	FMN1	-	FALSE
chr5	125961011	A	G	0.00075	PHAX	+	TRUE	AluSz	SINE,Alu
chr11	111431662	T	A	0.00204	LAYN	+	FALSE
chr1	158631171	A	C	0.00815	SPTA1	-	FALSE
chr1	1246979	G	T	0.00168	PUSL1,CPSF3L	+,-	FALSE
chr7	4809089	A	G	0.00552	FOXK1	+	TRUE	AluSx1	SINE,Alu
chr21	34728099	A	G	1.57787E-05	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr5	79922263	T	G	0.00913	DHFR	-	FALSE	HAL1	SINE,Alu
chr1	1417649	T	G	0.00274	ATAD3B	+	FALSE
chr1	109240643	A	C	0.00608	PRPF38B	+	FALSE
chr5	109204057	T	A	0.00614	MAN2A1	+	FALSE
chr19	200571	T	C	0.00079	LINC01002	-	FALSE
chr2	101622888	T	A	0.00210	RPL31	+	FALSE
chr1	145329095	C	G	0.00261	NBPF20,NBPF10	+	FALSE
chr5	82877162	G	A	0.00296	VCAN	+	FALSE	(A)n	SINE,Alu
chr1	204526727	A	G	0.00033	MDM4	+	TRUE	AluSx	SINE,Alu
chr15	85185205	T	C	0.00459	WDR73,SCAND2P	+,-	FALSE	FLAM_C	SINE,Alu
chr5	43527402	T	C	0.00539	PAIP1	-	FALSE
chr3	42253664	C	T	0.00065	TRAK1	+	FALSE
chr19	9672979	T	C	0.00028		.	FALSE	AluSx3	SINE,Alu
chr7	154796171	G	A	0.00066	PAXIP1-AS1	+	FALSE	AluSx3	SINE,Alu
chr2	161130521	G	A	0.00454	RBMS1	-	FALSE
chr1	38280010	C	T	0.00990	MTF1	-	FALSE
chr1	179042544	A	G	0.00722	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	1684347	C	T	0.00550	NADK	-	FALSE
chr8	30536016	T	C	2.97001E-06	GSR	-	TRUE	AluJr	SINE,Alu
chr15	41590932	A	G	0.00055	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr10	101992783	T	C	0.00313	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr1	36068237	T	C	0.00812	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	109202858	G	A	0.00054	MAN2A1	+	FALSE	(A)n	SINE,Alu
chr17	61502460	T	A	0.00161	TANC2	+	FALSE
chr1	1597423	C	T	2.12697E-10	CDK11B,SLC35E2B	-	FALSE
chr1	85715978	C	G	0.00815	C1orf52	-	FALSE
chr1	6653508	G	A	0.00320	KLHL21	-	FALSE
chr1	19542631	T	C	0.00176	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr1	160966301	T	C	7.77749E-07	F11R	-	TRUE	AluSg	SINE,Alu
chr4	184238324	G	A	0.00870	WWC2	+	FALSE
chr11	76733945	A	T	0.00931	ACER3	+	FALSE	A-rich	SINE,Alu
chr7	128144035	A	G	0.00054		.	FALSE	AluSq2	SINE,Alu
chr5	32586597	G	C	0.00970	SUB1	+	FALSE
chr1	19543247	T	C	5.23836E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	180144485	G	A	0.00665	QSOX1	+	FALSE
chr1	54871874	C	T	2.61533E-07	SSBP3	-	FALSE
chr17	49042216	T	C	0.00746	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	36032229	A	C	0.00806	NCDN	+	FALSE
chr2	64119875	G	A	0.00781	VPS54	-	FALSE
chr1	10518052	T	C	7.90759E-05		.	FALSE	AluJr	SINE,Alu
chr1	15990912	T	C	0.00133		.	FALSE	AluSx3	SINE,Alu
chr1	25168124	G	C	0.00669	CLIC4	+	FALSE
chr2	189877305	T	C	0.00612	COL3A1	+	FALSE
chr1	9160996	T	C	0.00023		.	FALSE	AluJb	SINE,Alu
chr1	113001409	C	T	2.24539E-06	CTTNBP2NL	+	FALSE	AluJr	SINE,Alu
chr11	9771768	A	G	0.00891	SWAP70	+	TRUE	AluSx1	SINE,Alu
chr1	109746825	A	G	0.00281	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr16	81064543	A	G	0.00066	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	32827843	G	C	0.00275	FAM229A	-	FALSE
chr3	93846831	G	A	0.00547		.	FALSE	AluSq2	SINE,Alu
chr1	44438961	A	G	0.00013	DPH2	+	FALSE	MER3	SINE,Alu
chr2	152314385	G	A	0.00040	RIF1	+	FALSE
chr1	109465171	T	A	0.00989	GPSM2	+	FALSE
chr1	46774783	A	G	1.06423E-10	UQCRH	+	FALSE	(AGG)n	SINE,Alu
chr17	43364293	C	G	0.00144	MAP3K14	-	FALSE
chr1	44088117	G	T	0.00731	PTPRF	+	FALSE	(T)n	SINE,Alu
chr6	42856978	A	G	0.00819	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr2	227660628	T	G	0.00025	IRS1	-	FALSE
chr19	53914411	A	G	8.16883E-05	ZNF765	+	TRUE	AluSx	SINE,Alu
chr1	54231850	T	A	0.00681	NDC1	-	FALSE
chr1	111682307	G	C	0.00637	DRAM2,CEPT1	+,-	FALSE
chr2	85132773	C	A	5.10736E-05	TMSB10	+	FALSE
chr1	241796949	G	A	0.00053	OPN3,CHML	-	FALSE
chr3	184429718	A	G	0.00914	MAGEF1	-	FALSE
chr2	37330506	T	C	0.00140		.	FALSE	AluSq2	SINE,Alu
chr18	47014856	T	A	0.00722	RPL17-C18orf32,RPL17	-	FALSE
chr5	53841240	A	G	0.00416	SNX18	+	FALSE
chr8	30536554	T	C	0.00023	GSR	-	TRUE	AluSp	SINE,Alu
chr1	33148211	A	G	9.09328E-07	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	180859304	T	C	2.77658E-06	XPR1	+	FALSE
chr1	145688973	A	G	0.00283	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	19545144	G	T	0.00071	LOC101927895,EMC1	+,-	FALSE
chr6	42855200	A	G	2.13337E-05	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	38423235	C	A	0.00040	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	2113565	T	G	0.00429	PRKCZ	+	FALSE
chr2	99812978	A	G	0.00167	MRPL30	+	TRUE	AluJb	SINE,Alu
chr11	32625925	A	G	0.00845	CCDC73	-	FALSE	AluJb	SINE,Alu
chr1	6314743	C	T	6.72719E-05	GPR153	-	FALSE
chr6	44417835	A	G	8.27091E-07	CDC5L	+	TRUE	AluSx	SINE,Alu
chr5	37290397	T	C	0.00305		.	FALSE	AluSz	SINE,Alu
chr4	3219613	A	C	0.00361	HTT	+	FALSE
chr14	102547384	A	T	0.00403	HSP90AA1	-	FALSE
chr19	53914448	A	G	0.00583	ZNF765	+	TRUE	AluSx	SINE,Alu
chr3	172115476	A	G	0.00892	FNDC3B	+	FALSE	(A)n	SINE,Alu
chr5	140594470	G	A	0.00041	PCDHB13	+	FALSE
chr1	10519064	T	C	0.00192		.	FALSE	AluSx3	SINE,Alu
chr1	16892938	T	C	0.00569	NBPF1	-	FALSE
chr1	229762054	T	A	0.00084	URB2	+	FALSE
chr2	86364707	G	T	0.00131	PTCD3	+	FALSE
chr1	26608018	G	A	2.25777E-05		.	FALSE
chr1	35648710	G	C	0.00377	SFPQ	-	FALSE
chr2	20401859	A	T	0.00023	SDC1	-	FALSE	(A)n	SINE,Alu
chr1	167973198	A	G	0.00061	DCAF6	+	FALSE
chr3	57549504	A	G	0.00384	PDE12	+	TRUE	AluJb	SINE,Alu
chr1	86049390	A	G	0.00918	CYR61	+	FALSE
chr19	48753070	T	C	0.00214	CARD8	-	TRUE
chr3	122283291	C	A	0.00061	DTX3L,PARP9	+,-	FALSE
chr1	144931727	G	A	4.04936E-05	NBPF20,PDE4DIP	+,-	FALSE
chr5	32404176	C	T	0.00342	ZFR	-	FALSE
chr1	21544601	C	T	0.00196	ECE1	-	FALSE
chr2	239973454	T	C	0.00091	HDAC4	-	FALSE
chr4	17802824	T	C	0.00594	DCAF16	-	TRUE	AluSz	SINE,Alu
chr5	125962344	A	G	0.00101	PHAX	+	TRUE	AluSc	SINE,Alu
chr3	57199227	A	C	0.00638	IL17RD	-	FALSE
chr1	183486859	G	A	0.00831	SMG7	+	FALSE
chr1	120612194	C	G	0.00091	NOTCH2	-	FALSE	(CCG)n	SINE,Alu
chr2	203742188	T	C	0.00522		.	FALSE	AluJb	SINE,Alu
chr2	37331560	T	C	0.00040		.	FALSE	AluJb	SINE,Alu
chr14	53109810	T	C	0.00463	ERO1A	-	TRUE	MER53	SINE,Alu
chr4	57326291	A	G	0.00549	PAICS	+	TRUE	AluJr	SINE,Alu
chr3	197612370	A	G	0.00157		.	FALSE	AluSp	SINE,Alu
chr1	153782011	C	T	0.00913	GATAD2B	-	FALSE
chr1	25687901	T	C	0.00926	TMEM50A	+	FALSE
chr1	59124634	C	A	0.00322	MYSM1	-	FALSE	(AC)n	SINE,Alu
chr12	26809316	G	A	0.00150	ITPR2	-	FALSE
chr1	117532372	G	T	0.00678	PTGFRN	+	FALSE
chr6	31324643	G	C	5.95617E-06		.	FALSE
chr7	131188652	G	C	0.00684	PODXL	-	FALSE	MIR3	SINE,Alu
chr7	44918768	T	C	3.66924E-05	PURB	-	TRUE	AluSg	SINE,Alu
chr1	6282401	T	C	0.00026	ICMT	-	TRUE	AluSz	SINE,Alu
chr6	74134744	T	C	0.00214		.	FALSE	AluSz	SINE,Alu
chr1	92862764	A	G	0.00415		.	FALSE	AluJr	SINE,Alu
chr1	16891340	T	A	0.00440	NBPF1	-	FALSE
chr3	15780233	C	T	1.83528E-06	ANKRD28	-	FALSE	MER11B	SINE,Alu
chr1	222906392	C	T	0.00804	BROX	+	FALSE	AluSx	SINE,Alu
chr3	10192704	A	G	0.00402	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	160966301	T	C	8.33949E-06	F11R	-	TRUE	AluSg	SINE,Alu
chr12	98943096	A	G	2.86698E-09	TMPO	+	TRUE	AluSz	SINE,Alu
chr3	10193797	A	G	0.00261	VHL	+	TRUE	AluSx	SINE,Alu
chr1	28662254	A	G	0.00505	MED18	+	TRUE	AluSq2	SINE,Alu
chr3	15114293	T	C	2.60553E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr10	81114959	C	T	0.00048	PPIF	+	FALSE	MSTA	SINE,Alu
chr1	205737682	A	G	0.00320	RAB29	-	FALSE	AluSq2	SINE,Alu
chr2	176792535	T	G	0.00211	LNPK	-	FALSE
chr20	25428750	A	G	3.17139E-06	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	32801745	A	G	0.00357	MARCKSL1	-	FALSE
chr2	201774393	T	C	0.00971		.	FALSE	AluSz	SINE,Alu
chr6	29912348	A	G	0.00429		.	FALSE
chr1	16893686	G	C	0.00296	NBPF1	-	FALSE
chr7	137561077	C	A	0.00995	CREB3L2	-	FALSE
chr16	48387215	A	G	0.00864	LONP2,MIR5095	+	TRUE	AluJb	SINE,Alu
chr1	53684924	A	G	0.00347	C1orf123	-	FALSE	L1MA5A	SINE,Alu
chr3	112720120	T	G	0.00573	GTPBP8	+	FALSE
chr1	17394048	T	A	0.00055	PADI2	-	FALSE
chr14	74526975	T	C	0.00024	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr3	20025661	C	T	4.83976E-05	RAB5A,PP2D1	+,-	FALSE
chr2	202029998	T	A	0.00350	CFLAR	+	FALSE	(TTA)n	SINE,Alu
chr1	10042937	A	G	2.41028E-05	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	1469546	G	A	0.00300	ATAD3A	+	FALSE
chr1	33149443	A	G	2.90388E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr14	31916770	T	C	0.00153	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr2	61705067	A	T	0.00084		.	FALSE
chr1	27216740	G	A	0.00801	GPN2	-	FALSE
chr2	174090928	G	C	0.00852	ZAK,MLK7-AS1	+,-	FALSE
chr1	16889866	G	A	0.00051	NBPF1	-	FALSE
chr12	133333936	C	T	0.00726	ANKLE2	-	FALSE	MER58A	SINE,Alu
chr4	39552174	T	C	0.00026	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr6	27425185	C	A	0.00577	ZNF184	-	FALSE
chr1	205686522	G	T	0.00427	NUCKS1	-	FALSE
chr1	109818161	C	T	0.00864	CELSR2	+	FALSE
chr1	16945027	T	C	0.00819	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr1	16958064	A	G	0.00240		.	FALSE
chr6	43582750	A	G	0.00844	POLH	+	TRUE	AluSx1	SINE,Alu
chrX	73421601	T	C	0.00219	FTX	-	TRUE	L1MB7	SINE,Alu
chr1	53289940	A	G	0.00245	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr2	46524711	C	T	0.00513	EPAS1	+	FALSE
chr3	195243024	C	A	0.00729	PPP1R2	-	FALSE
chr1	3753136	A	T	0.00088	CEP104	-	FALSE
chr5	145838680	A	G	0.00395	TCERG1	+	FALSE	(GCCCAG)n	SINE,Alu
chr1	145281633	C	A	0.00059	NBPF20,NOTCH2NL	+	FALSE
chr7	135285707	G	A	0.00084	NUP205	+	FALSE
chr5	1574319	T	A	0.00158	SDHAP3	-	FALSE
chr3	195963398	A	G	0.00271		.	FALSE
chr4	17803604	T	C	0.00174	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	144931392	G	A	0.00286	NBPF20,PDE4DIP	+,-	FALSE
chr5	141690819	G	A	0.00062	SPRY4	-	FALSE
chr3	37317605	A	G	9.02711E-05	GOLGA4	+	FALSE
chr2	113334357	G	A	8.00796E-05	POLR1B	+	FALSE	AluSz	SINE,Alu
chr3	45722396	A	G	0.00231	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	109816462	C	T	0.00083	CELSR2	+	FALSE
chr2	220406239	T	G	0.00014	CHPF	-	FALSE	MIRb	SINE,Alu
chr6	42855972	A	G	3.93003E-05	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr5	126889370	C	T	0.00713	PRRC1	+	FALSE
chr1	85785550	C	A	0.00156	DDAH1	-	FALSE
chr1	66100450	G	A	0.00528	LEPR	+	FALSE
chr1	160965379	T	C	0.00010	F11R	-	TRUE	AluSc	SINE,Alu
chr3	66428450	G	A	0.00355	SLC25A26	+	FALSE
chr3	191114309	A	T	1.88175E-05	CCDC50	+	FALSE
chr1	6283348	T	C	0.00082	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	32535691	A	G	0.00023		.	FALSE	AluJb	SINE,Alu
chr1	36770621	G	T	0.00424	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	33148706	A	G	0.00038	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	15015	G	C	0.00809	WASH7P	-	FALSE
chr1	84373309	T	C	0.00627	TTLL7	-	FALSE
chr2	8996701	G	T	0.00063	MBOAT2	-	FALSE	AluSz	SINE,Alu
chr1	149913513	T	C	0.00495	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr1	1361641	C	T	0.00928	TMEM88B	+	FALSE
chr1	144594107	C	G	0.00706	NBPF20	+	FALSE
chr6	29857589	A	G	0.00280		.	FALSE
chr21	40567667	A	G	0.00658	BRWD1	-	FALSE
chr1	16919961	C	T	0.00133	NBPF1	-	FALSE
chr1	6282587	T	C	7.24363E-07	ICMT	-	TRUE
chr1	67451522	A	T	0.00883	MIER1	+	FALSE
chr19	19791650	A	G	1.64958E-05	ZNF101	+	TRUE	AluSc	SINE,Alu
chr2	85772407	T	A	0.00232	GGCX	-	FALSE
chr1	11734730	C	T	4.90909E-09	MAD2L2	-	FALSE
chr1	10517689	T	C	0.00504		.	FALSE	AluSx1	SINE,Alu
chr1	115299505	A	T	0.00064	CSDE1	-	FALSE
chr2	37327702	T	C	0.00989		.	FALSE
chr20	35409827	T	C	0.00267	SOGA1	-	TRUE	AluSx	SINE,Alu
chr4	17629434	A	G	0.00661		.	FALSE	AluSx3	SINE,Alu
chr10	51943605	C	T	0.00508		.	FALSE	MLT1J	SINE,Alu
chr7	29961884	C	G	0.00024	SCRN1	-	FALSE
chr1	1717502	T	G	0.00239	GNB1	-	FALSE
chr5	115165731	T	C	0.00410	ATG12	-	TRUE	AluSq2	SINE,Alu
chr5	40835311	A	T	0.00632	RPL37	-	FALSE
chr2	11053740	C	T	0.00402	KCNF1	+	FALSE
chr3	10192596	A	G	7.92003E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	145375869	G	A	0.00480	NBPF20,NBPF10	+	FALSE
chr1	148343689	A	G	0.00517	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	59246520	A	C	7.56706E-05	JUN	-	FALSE
chr11	769459	T	C	0.00082	PDDC1	-	TRUE	AluSq2	SINE,Alu
chr1	109476780	C	T	0.00990	GPSM2,CLCC1	+,-	FALSE
chr1	35658260	C	G	0.00477	SFPQ	-	FALSE
chr1	230416399	G	T	5.37638E-05	GALNT2	+	FALSE
chr1	19238562	G	A	3.36880E-06	IFFO2	-	FALSE
chr3	41281407	G	T	0.00011	CTNNB1	+	FALSE
chr6	42854611	A	G	0.00541	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr1	36067760	T	C	0.00203	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	150704633	T	C	1.58455E-05	CTSS	-	TRUE	AluJo	SINE,Alu
chr4	2940485	T	C	0.00676	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	160967899	T	C	0.00011	F11R	-	TRUE	AluSp	SINE,Alu
chr6	114182783	A	G	0.00442	MARCKS	+	FALSE
chr1	143399383	T	A	0.00198		.	FALSE	L1MC4	SINE,Alu
chr1	10520751	T	C	0.00495	DFFA	-	TRUE	AluSc8	SINE,Alu
chr4	139966801	A	G	0.00282	NOCT	+	TRUE	AluYj4	SINE,Alu
chr17	48155425	G	A	0.00603	ITGA3	+	FALSE
chr2	3502198	T	A	0.00764	ADI1	-	FALSE
chr3	156258308	T	C	9.02162E-07	SSR3	-	TRUE	AluYk3	SINE,Alu
chr2	88327464	C	T	0.00046	KRCC1	-	FALSE
chr1	156044222	G	T	0.00758	MEX3A	-	FALSE	(T)n	SINE,Alu
chr1	100548868	T	C	8.06321E-05	MFSD14A	+	FALSE
chr2	105881071	C	A	0.00851	TGFBRAP1	-	FALSE
chr10	24873171	G	T	0.00329	ARHGAP21	-	FALSE
chr1	109818162	T	C	0.00253	CELSR2	+	FALSE
chr7	158525786	G	A	0.00453	ESYT2	-	FALSE
chr1	179077613	T	C	0.00731	ABL2	-	FALSE
chr5	151041883	G	A	0.00343	SPARC	-	FALSE
chr1	26128521	A	G	0.00251	SEPN1	+	TRUE	AluJb	SINE,Alu
chr1	52498140	G	A	0.00044	TXNDC12,KTI12	-	FALSE
chr12	57450118	T	A	0.00669	NEMP1	-	FALSE
chr5	140751128	C	G	0.00647	PCDHGA1,PCDHGA2,PCDHGA3,PCDHGB1,PCDHGA4,PCDHGB2,PCDHGA5,PCDHGB3	+	FALSE
chr5	177019196	G	C	0.00509	TMED9	+	FALSE	(GCG)n	SINE,Alu
chr1	144912233	C	T	0.00066	NBPF20,PDE4DIP	+,-	FALSE
chr3	40503555	A	T	0.00177	RPL14	+	FALSE
chr1	3545191	C	T	0.00165	TPRG1L	+	FALSE
chr1	11782984	A	G	0.00107		.	FALSE	AluSx	SINE,Alu
chr1	889183	C	T	3.20836E-06	NOC2L	-	FALSE
chr9	115447527	T	C	0.00200	INIP	-	TRUE	AluJb	SINE,Alu
chr4	39528976	C	T	8.52335E-05	UGDH	-	FALSE
chr1	246829742	T	C	0.00960	CNST	+	FALSE	(TGTG)n	SINE,Alu
chr1	92946618	A	G	0.00062	GFI1	-	FALSE
chr16	10623566	T	C	0.00019	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	16890630	T	G	0.00147	NBPF1	-	FALSE
chr4	165998958	T	C	0.00021	TMEM192	-	TRUE	Alu	SINE,Alu
chr1	27182751	C	A	0.00122		.	FALSE
chr2	183817957	T	A	0.00031	NCKAP1	-	FALSE
chr19	19793795	A	G	0.00030	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr1	28835847	A	G	4.14471E-06	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	16905837	G	A	0.00029	NBPF1	-	FALSE
chr1	144822330	C	T	6.80810E-06	NBPF20,NBPF9	+	FALSE
chr1	169824104	G	A	0.00744	SCYL3	-	FALSE
chr2	74090062	T	G	0.00248	STAMBP	+	FALSE
chr1	66058513	A	G	0.00091	LEPR	+	FALSE
chr3	48787011	T	C	0.00040	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr3	13670508	G	A	0.00017	FBLN2	+	FALSE
chr8	26492397	C	T	0.00709	DPYSL2	+	FALSE
chr1	113672569	A	G	0.00742		.	FALSE	AluJb	SINE,Alu
chr17	57279281	A	G	0.00918	PRR11	+	TRUE	AluSq2	SINE,Alu
chr3	14986138	T	C	1.80576E-11	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr3	16301148	T	C	0.00050	DPH3	-	FALSE
chr1	46075724	A	G	1.14407E-05	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	16787985	A	G	0.00053		.	FALSE	AluSz	SINE,Alu
chr4	57327058	A	G	0.00315	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	16952920	G	A	0.00475	CROCCP2	-	FALSE
chr1	27181647	G	A	0.00103	ZDHHC18	+	FALSE
chr11	118915753	T	C	8.93388E-07	HYOU1	-	FALSE
chr7	38764459	T	C	0.00789	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	36067817	T	C	7.91657E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	45452227	G	C	0.00046	EIF2B3	-	FALSE
chr7	64023437	A	G	0.00073	ZNF680	-	FALSE
chr3	14526653	G	T	0.00936	SLC6A6	+	FALSE
chr1	1650801	T	C	1.21097E-05	CDK11B,CDK11A	-	FALSE
chr1	87811100	A	T	0.00084	LMO4	+	FALSE
chr1	148004548	T	C	0.00110	NBPF8	-	FALSE
chr1	150597527	T	C	0.00058	ENSA	-	FALSE
chr7	193091	C	T	1.15297E-06	FAM20C	+	FALSE
chr3	49452957	A	T	0.00066	TCTA	+	FALSE	AluSg	SINE,Alu
chr1	40705200	G	A	3.20116E-08	RLF	+	FALSE
chr1	179829093	T	C	0.00056	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	53679610	G	A	0.00084	CPT2	+	FALSE	AluSz	SINE,Alu
chr1	144596317	C	T	0.00020	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	38174987	T	C	0.00032	CDCA8	+	FALSE
chr1	10521237	T	C	0.00200	DFFA	-	TRUE	AluY	SINE,Alu
chr1	28835937	A	G	0.00181	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr12	51325237	A	G	5.73531E-05	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr1	26901090	C	T	0.00056	RPS6KA1	+	FALSE
chr1	19441410	G	A	7.84348E-05	UBR4	-	FALSE
chr1	46828734	T	C	0.00604	NSUN4	+	FALSE
chr1	10517653	T	C	0.00776		.	FALSE	AluSx1	SINE,Alu
chr3	124950418	T	A	0.00039	ZNF148	-	FALSE
chr1	39924765	C	A	0.00303	MACF1	+	FALSE
chr4	17803616	T	C	4.59289E-05	DCAF16	-	TRUE	AluY	SINE,Alu
chr12	98942621	A	G	4.05531E-12	TMPO	+	TRUE	AluSc	SINE,Alu
chr7	22984967	A	G	0.00108	FAM126A	-	FALSE
chr1	17393260	T	C	0.00094	PADI2	-	FALSE
chr5	125961532	A	G	0.00039	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	40982042	G	A	0.00330	EXO5	+	FALSE	AluSx	SINE,Alu
chr9	131457814	G	A	0.00021	SET	+	FALSE
chr2	198416734	A	T	0.00257	HSPE1-MOB4,MOB4	+	FALSE
chr7	6500726	A	T	0.00560	KDELR2	-	FALSE
chr1	212277618	T	G	0.00173	DTL	+	FALSE
chr1	67874270	G	A	0.00019	SERBP1	-	FALSE
chr1	27678712	A	G	0.00215	SYTL1	+	TRUE	AluSx1	SINE,Alu
chr19	42376675	A	G	0.00085		.	FALSE
chr1	11734730	C	T	7.77156E-16	MAD2L2	-	FALSE
chr1	236748403	G	C	0.00519	HEATR1	-	FALSE
chr1	201845899	G	T	1.72907E-05	IPO9	+	FALSE
chrX	123046598	A	G	0.00371	XIAP	+	TRUE	AluSz	SINE,Alu
chr5	37291636	T	C	0.00518		.	FALSE	AluSx3	SINE,Alu
chr1	206635244	T	A	0.00195	SRGAP2	+	FALSE
chr2	28636644	A	G	0.00918	FOSL2	+	FALSE
chr1	142700116	C	T	0.00081	ANKRD20A12P	-	FALSE
chr5	14510071	G	T	0.00130	TRIO	+	FALSE
chr1	10518052	T	C	0.00179		.	FALSE	AluJr	SINE,Alu
chr1	20978451	T	C	0.00193	PINK1-AS,DDOST	-	TRUE	AluY	SINE,Alu
chr12	7175047	A	G	0.00634	C1S	+	FALSE
chr1	62628531	A	G	0.00716	PATJ	+	TRUE	AluSg4	SINE,Alu
chr3	88199298	T	C	0.00048	C3orf38	+	FALSE
chr1	180897569	C	T	0.00960	KIAA1614	+	FALSE
chr12	124105948	C	T	0.00778	EIF2B1	-	FALSE
chr2	206987738	T	C	0.00859		.	FALSE	AluJb	SINE,Alu
chr1	24798068	C	A	0.00381	NIPAL3	+	FALSE	AluJr	SINE,Alu
chr1	45976722	G	T	0.00292	MMACHC,PRDX1	+,-	FALSE
chr14	74526976	T	C	0.00469	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr2	102508658	T	A	0.00275	MAP4K4	+	FALSE
chr14	53242652	T	C	0.00081	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr4	88061645	T	A	0.00049	AFF1	+	FALSE	(TATAT)n	SINE,Alu
chr3	113370193	C	T	4.09251E-05	USF3	-	FALSE	UCON34	SINE,Alu
chr7	116339672	C	T	0.00876	MET	+	FALSE
chr6	100005419	A	G	2.18273E-06	CCNC	-	FALSE	AluSg	SINE,Alu
chr1	145311900	C	T	0.00286	NBPF20,NBPF10	+	FALSE
chr1	16889620	T	C	0.00884	NBPF1	-	FALSE
chr1	121133779	C	G	0.00567	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr3	33877626	G	A	2.14228E-08	PDCD6IP	+	FALSE
chr1	16889014	C	T	0.00722	NBPF1	-	FALSE
chr2	191829133	G	A	0.00097	GLS	+	FALSE
chr2	191556844	T	A	0.00261	NAB1	+	FALSE
chr1	179813613	T	C	7.15786E-05	TOR1AIP2	-	FALSE
chr1	54692334	T	C	0.00021	SSBP3	-	FALSE	(T)n	SINE,Alu
chr1	54493197	T	C	0.00489	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr3	10192827	A	G	1.26958E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	16893721	A	C	0.00179	NBPF1	-	FALSE
chr1	182360930	A	G	0.00506	GLUL	-	FALSE
chr1	33148045	A	G	0.00264	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr4	17629926	C	T	0.00319		.	FALSE	MER90	SINE,Alu
chr1	235272660	C	T	0.00111	TOMM20	-	FALSE	Tigger10	SINE,Alu
chr6	13788387	T	C	0.00240	MCUR1	-	TRUE	AluSx	SINE,Alu
chr15	89739348	A	G	0.00035	ABHD2	+	FALSE	MER5A	SINE,Alu
chr1	184761350	T	C	0.00219	FAM129A	-	TRUE	AluJo	SINE,Alu
chr2	55516911	A	G	0.00719	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr11	9602076	T	C	7.58058E-05	WEE1	+	FALSE	AluSg	SINE,Alu
chr2	128602455	T	C	0.00632		.	FALSE	AluSq2	SINE,Alu
chr2	11426734	T	C	4.76290E-06	ROCK2	-	FALSE
chr3	15113736	T	C	0.00641	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	569991	T	G	0.00980		.	FALSE
chr1	16254872	C	A	4.87895E-08	SPEN	+	FALSE
chr17	57281021	A	G	1.37320E-05	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	100657416	C	T	0.00228	DBT	-	FALSE	AluJb	SINE,Alu
chr1	156675377	G	C	0.00935	CRABP2	-	FALSE
chr1	65897981	G	A	0.00071	LEPR,LEPROT	+	FALSE
chr1	21810903	A	G	0.00154	NBPF3	+	FALSE	L1MC4	SINE,Alu
chr1	36067925	T	C	1.81623E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chrX	123046892	A	G	0.00064	XIAP	+	TRUE	AluSx	SINE,Alu
chr1	3395039	G	A	0.00027	ARHGEF16	+	FALSE
chrX	123046779	A	G	0.00629	XIAP	+	TRUE	AluSz	SINE,Alu
chr2	114356360	G	A	0.00520	WASH2P	+	FALSE
chr1	35649804	C	A	0.00127	SFPQ	-	FALSE
chr1	179326418	A	G	0.00626	SOAT1	+	TRUE	AluSg	SINE,Alu
chr1	327441	A	G	1.08612E-09		.	FALSE
chr13	47325380	G	A	0.00270	LRCH1	+	FALSE
chr7	6064010	C	A	0.00304	EIF2AK1	-	FALSE
chr15	90819594	A	G	9.20455E-05		.	FALSE	AluSx	SINE,Alu
chr6	42857057	A	G	0.00020	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	19953132	C	A	0.00910	MINOS1,MINOS1-NBL1	+	FALSE
chr9	136897584	C	A	0.00060	BRD3	-	FALSE	A-rich	SINE,Alu
chr2	191799592	A	G	2.07606E-11	GLS	+	TRUE
chr1	115110683	A	C	0.00168	BCAS2	-	FALSE
chr1	206566195	C	T	0.00052	SRGAP2	+	FALSE
chr2	74381319	C	A	0.00912	MOB1A	-	FALSE	AluY	SINE,Alu
chr2	61277775	A	G	0.00640	PEX13	+	TRUE	AluY	SINE,Alu
chr1	38327700	T	C	0.00509	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr1	46076642	A	G	0.00552	NASP	+	TRUE	AluSx	SINE,Alu
chr15	85190470	G	T	8.70862E-05	WDR73	-	FALSE

RBP	LIN28B
Knock-Method	shRNA
RBP Family	CSD
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR927SLP
Platform	HiSeq
Pubmed ID	32252787

LIN28B - Target Gene Network