RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	10192608	A	G	0.00030	VHL	+	TRUE	AluSx1	SINE,Alu
chr3	169988286	C	T	0.00029	PRKCI	+	FALSE
chr1	788840	T	C	0.00299	LINC01128	+	FALSE
chr12	133298938	A	G	0.00034	PGAM5	+	TRUE	AluSg	SINE,Alu
chr17	4849959	G	T	0.00636	PFN1	-	FALSE
chr1	15909744	C	T	0.00225	AGMAT	-	FALSE
chr1	168218504	T	C	0.00748		.	FALSE	AluSz	SINE,Alu
chr1	10044366	A	G	0.00531	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr14	90871942	C	A	0.00057	CALM1	+	FALSE
chr5	130536847	A	G	0.00917	LYRM7	+	TRUE	AluSx4	SINE,Alu
chr1	109967951	A	C	0.00095	PSMA5	-	FALSE
chr1	120612006	G	A	0.00930	NOTCH2	-	FALSE
chr1	16959698	G	A	0.00086		.	FALSE
chr2	65432447	C	T	0.00486		.	FALSE
chr2	37327677	T	C	0.00019		.	FALSE
chrX	77083915	T	C	0.00075	MAGT1	-	TRUE	AluSz	SINE,Alu
chr4	129795661	A	T	0.00165	JADE1	+	FALSE
chr1	10520702	T	C	0.00438	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	24989266	A	T	0.00392	SRRM1	+	FALSE
chr1	36067760	T	C	0.00213	PSMB2	-	TRUE	AluSz	SINE,Alu
chr18	60998527	C	G	0.00078	KDSR	-	FALSE	(AGAGAGAC)n	SINE,Alu
chr5	133956668	G	A	0.00419	SAR1B	-	FALSE
chr4	123859284	C	T	0.00034	SPATA5	+	FALSE
chr1	95362949	A	T	0.00012	CNN3	-	FALSE	(A)n	SINE,Alu
chr1	144930940	T	C	0.00181	NBPF20,PDE4DIP	+,-	FALSE
chr1	36068184	T	C	0.00177	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	179829200	T	C	0.00497	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	93828011	G	T	0.00464	DR1	+	FALSE
chr3	160134195	G	A	0.00631	SMC4	+	FALSE
chr1	109818158	C	T	4.51493E-05	CELSR2	+	FALSE
chr4	140394600	G	A	0.00950	RAB33B	+	FALSE
chr19	16661431	T	C	0.00017	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr2	37331546	T	C	0.00936		.	FALSE	AluJb	SINE,Alu
chr7	38764464	T	C	0.00193	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	6354955	G	A	0.00090	ACOT7	-	FALSE
chr1	9740894	C	T	0.00097	PIK3CD,PIK3CD-AS2	+,-	FALSE	MLT1F1	SINE,Alu
chr2	207027628	A	G	2.96026E-05	EEF1B2	+	FALSE
chr1	36068294	T	C	0.00321	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	99812311	A	G	0.00016	MRPL30	+	TRUE	AluSx	SINE,Alu
chr7	100031498	T	C	0.00110	MEPCE	+	FALSE
chr1	46117185	C	T	0.00714	GPBP1L1	-	FALSE
chr1	144606963	G	T	0.00080	NBPF20	+	FALSE
chr1	65330637	C	T	0.00047	JAK1	-	FALSE
chr6	31601344	T	C	0.00569		.	FALSE
chr1	67875026	A	T	0.00557	SERBP1	-	FALSE
chr1	36068276	T	C	5.36857E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	23833607	A	T	0.00890	E2F2	-	FALSE
chr16	81064560	A	G	0.00014	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	115249239	G	A	0.00034	NRAS	-	FALSE
chr2	130807905	G	T	0.00634	FAR2P1	-	FALSE
chr1	230979207	C	A	0.00643	C1orf198	-	FALSE
chr1	19934879	T	C	0.00454	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	109465167	T	A	0.00233	GPSM2	+	FALSE
chr4	114135223	A	T	5.22810E-05	ANK2	+	FALSE
chr1	19585917	T	A	0.00308	MRTO4	+	FALSE	AluJr	SINE,Alu
chr2	74332840	G	C	4.77205E-06	TET3	+	FALSE
chr2	206987629	T	C	0.00208		.	FALSE	AluJb	SINE,Alu
chr1	10520117	T	C	0.00078		.	FALSE	AluSx	SINE,Alu
chr17	49041866	T	C	0.00153	SPAG9	-	TRUE	AluSx	SINE,Alu
chr3	140695493	C	A	0.00559	SLC25A36	+	FALSE
chr2	3597974	T	C	1.93309E-05	RNASEH1	-	FALSE
chr1	94351064	A	T	0.00620	GCLM	-	FALSE
chr1	16861804	G	A	0.00903	LOC100132147	-	FALSE	tRNA-Glu-GAA	SINE,Alu
chr6	153314040	G	A	0.00041	MTRF1L	-	FALSE
chr10	75008845	T	C	4.48613E-05	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr4	165998152	T	C	0.00288	TMEM192	-	TRUE	AluSx	SINE,Alu
chr1	33961147	T	G	0.00911	ZSCAN20	+	FALSE
chr6	37138022	C	G	0.00953	PIM1	+	FALSE
chr19	13883548	A	G	0.00566	MRI1	+	TRUE	AluYk3	SINE,Alu
chr2	242615532	C	A	0.00603	DTYMK	-	FALSE
chr3	49395692	G	A	0.00049	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr5	70248476	T	G	0.00273	SMN1,SMN2	+	FALSE	L1MC5a	SINE,Alu
chr3	15780233	C	T	1.83528E-06	ANKRD28	-	FALSE	MER11B	SINE,Alu
chr1	10003320	G	A	0.00168	LZIC,NMNAT1	+,-	FALSE
chr6	150046734	T	C	0.00248	NUP43	-	FALSE
chr3	57199227	A	C	0.00638	IL17RD	-	FALSE
chr1	19585772	G	A	0.00576	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr2	37331277	T	C	0.00366		.	FALSE	AluSx1	SINE,Alu
chr9	19376252	A	T	0.00367		.	FALSE
chr4	2940165	T	C	0.00201	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr5	125962169	A	G	0.00013	PHAX	+	TRUE	AluSc	SINE,Alu
chr2	206980072	G	A	1.35396E-05		.	FALSE	MLT1A1	SINE,Alu
chr1	36067886	T	C	0.00150	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	73115786	T	C	3.88619E-05	PPP4R2	+	FALSE
chr2	91847976	C	T	0.00010		.	FALSE	TAR1	SINE,Alu
chr6	31324110	G	A	0.00521		.	FALSE
chr1	94335335	G	T	0.00425	DNTTIP2	-	FALSE
chr7	140153699	C	A	0.00075	MKRN1	-	FALSE
chr2	37331525	T	C	0.00091		.	FALSE	AluJb	SINE,Alu
chr19	23542157	T	C	0.00140	ZNF91	-	TRUE	AluY	SINE,Alu
chr1	193058937	C	T	0.00195	TROVE2	+	FALSE	AluSc	SINE,Alu
chr2	86249930	T	C	0.00054	LOC90784	-	TRUE	AluJr	SINE,Alu
chr7	127947979	T	C	0.00257		.	FALSE	AluJr	SINE,Alu
chr5	134670071	A	T	0.00405	C5orf66,H2AFY	+,-	FALSE
chr12	98942696	A	G	3.06836E-07	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	33139061	T	C	0.00079	RBBP4	+	FALSE	AluSx3	SINE,Alu
chr1	148251875	T	C	0.00436	NBPF8,NBPF14,NBPF9	-	FALSE
chr4	2940347	T	C	1.36349E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	59122056	G	C	1.57132E-06	MYSM1	-	FALSE
chr1	154323598	T	A	0.00198	ATP8B2	+	FALSE	(TA)n	SINE,Alu
chr1	93308173	T	G	0.00380	FAM69A	-	FALSE
chr1	53680205	C	T	9.80404E-07	C1orf123	-	FALSE
chr1	235392546	T	C	0.00312	ARID4B	-	FALSE
chr4	38937372	T	C	0.00388	FAM114A1	+	FALSE
chr2	3504687	A	G	0.00755	ADI1	-	FALSE
chr2	113334357	G	A	8.00796E-05	POLR1B	+	FALSE	AluSz	SINE,Alu
chr1	54871874	C	T	1.50809E-06	SSBP3	-	FALSE
chr6	114182271	G	A	0.00011	MARCKS	+	FALSE
chr1	65299548	T	A	0.00852	JAK1	-	FALSE
chr6	42857057	A	G	0.00020	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	6283305	T	C	0.00129	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	176792535	T	G	0.00211	LNPK	-	FALSE
chr1	1595602	A	G	9.14189E-05	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr1	212910930	G	A	2.01027E-05	NSL1	-	FALSE
chr2	188385337	C	T	0.00210	TFPI	-	FALSE	L1MC3	SINE,Alu
chr3	156258319	T	C	0.00909	SSR3	-	TRUE	AluYk3	SINE,Alu
chr13	50102992	T	C	0.00956	SETDB2-PHF11,PHF11	+	FALSE	L2a	SINE,Alu
chr1	28662254	A	G	0.00052	MED18	+	TRUE	AluSq2	SINE,Alu
chr15	91044387	T	G	0.00077	IQGAP1	+	FALSE
chr1	179811337	C	A	0.00670	TOR1AIP2	-	FALSE	AluSp	SINE,Alu
chr1	28825337	A	G	0.00838	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr8	12283440	A	G	0.00041	FAM86B2	-	FALSE
chr1	9160958	T	C	0.00108		.	FALSE	AluJb	SINE,Alu
chr2	128064448	G	T	0.00637	MAP3K2	-	FALSE	(GT)n	SINE,Alu
chr1	9162362	T	C	0.00042		.	FALSE	AluSx	SINE,Alu
chr1	31838550	T	A	0.00595	FABP3	-	FALSE
chr1	86047210	C	T	0.00201	CYR61	+	FALSE
chr12	109886822	A	C	0.00406	KCTD10	-	FALSE
chr1	121133779	C	G	0.00567	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr2	113287424	T	A	0.00361	TTL	+	FALSE
chr3	49453834	C	T	0.00518	TCTA	+	FALSE
chr7	35840866	A	G	0.00947	SEPT7	+	FALSE
chr1	39317318	C	A	1.55431E-15	RRAGC	-	FALSE
chr5	36687341	T	C	0.00930	SLC1A3	+	FALSE
chr1	40306898	T	C	9.21891E-07	TRIT1	-	FALSE
chr3	45721934	A	G	0.00639	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr2	26617209	A	G	5.06124E-05	EPT1	+	FALSE	AluSz	SINE,Alu
chr1	82453022	A	G	0.00532	ADGRL2	+	FALSE
chr1	900721	T	C	0.00109	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	87328397	A	T	0.00252	SEP15	-	FALSE
chr1	161932324	A	G	0.00104	ATF6	+	FALSE
chr2	203744629	T	C	0.00363		.	FALSE	AluSx1	SINE,Alu
chr1	109239335	G	T	0.00011	PRPF38B	+	FALSE
chr3	184429155	A	T	0.00056	MAGEF1	-	FALSE
chr3	195701389	C	A	0.00227	SDHAP1	-	FALSE
chr3	181430334	G	A	0.00305	SOX2-OT,SOX2	+	FALSE
chr1	65898251	A	T	0.00143	LEPR,LEPROT	+	FALSE	MIRc	SINE,Alu
chr6	47200348	T	C	0.00274	TNFRSF21	-	FALSE
chr1	162752670	G	A	0.00594		.	FALSE
chr1	31732677	G	A	0.00030	SNRNP40	-	FALSE	A-rich	SINE,Alu
chr15	66791657	G	T	0.00422	RPL4	-	FALSE
chr1	244571947	C	T	0.00775	ADSS	-	FALSE
chr2	91843429	G	A	0.00037	LOC654342	-	FALSE
chr1	8413317	A	C	0.00957	RERE	-	FALSE
chr17	41133089	C	T	0.00179	RUNDC1	+	FALSE
chr6	150046601	T	C	0.00073	NUP43	-	TRUE	AluSq2	SINE,Alu
chr14	76662778	C	T	0.00261	GPATCH2L	+	FALSE
chr1	148556726	G	T	0.00023		.	FALSE
chr5	34906587	T	C	0.00442	RAD1	-	TRUE	AluJo	SINE,Alu
chr21	44330355	A	G	0.00062		.	FALSE	AluSq2	SINE,Alu
chr17	5288077	G	C	0.00066	RABEP1	+	FALSE
chr1	145281613	C	A	0.00979	NBPF20,NOTCH2NL	+	FALSE
chr9	7798518	G	C	0.00423	TMEM261	-	FALSE
chr3	193854148	T	A	0.00106	HES1	+	FALSE
chr1	214524576	T	C	0.00337	PTPN14	-	TRUE	AluSg	SINE,Alu
chr2	54858511	C	T	0.00124	SPTBN1	+	FALSE
chr3	196080624	T	C	0.00795	UBXN7	-	TRUE	AluSx	SINE,Alu
chr1	15991645	T	C	0.00361		.	FALSE	AluSp	SINE,Alu
chr17	58156064	G	A	9.79781E-05	HEATR6	-	FALSE
chrX	123046598	A	G	0.00371	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	116234313	A	G	0.00262	VANGL1	+	FALSE
chr6	138412313	A	G	0.00092	PERP	-	FALSE
chr1	19543247	T	C	0.00813	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr16	5134599	G	C	0.00355	ALG1,EEF2KMT	+,-	FALSE
chr1	201438098	T	G	2.75480E-05	PHLDA3	-	FALSE
chr20	3848225	A	G	0.00075	MAVS	+	TRUE	AluJr	SINE,Alu
chr1	163288931	G	A	0.00284	RGS5	-	FALSE	MamRep1527	SINE,Alu
chr1	145689693	A	G	0.00088	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr22	36677551	T	C	7.06365E-05	MYH9	-	FALSE
chr6	42857111	A	G	0.00681	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr1	155695968	A	G	0.00439	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	93827995	C	T	0.00236	DR1	+	FALSE
chr1	2333763	G	A	0.00867	RER1	+	FALSE
chr1	153521525	G	A	0.00013	LOC101928034,S100A3	+,-	FALSE
chr2	239360542	C	A	0.00989	ASB1	+	FALSE
chr1	949472	G	A	9.07885E-12	ISG15	+	FALSE
chr2	128950497	A	G	4.96654E-06	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	89447839	C	G	3.35704E-05	KYAT3,RBMXL1	-	FALSE
chr11	60658566	A	C	0.00387	PRPF19	-	FALSE
chr2	174090332	A	C	0.00918	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	19543459	T	C	0.00074	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	99812447	A	G	0.00587	MRPL30	+	TRUE	AluSx	SINE,Alu
chr2	37328012	T	C	6.47624E-05		.	FALSE
chr1	54691922	T	A	0.00219	SSBP3	-	FALSE
chr16	10623631	T	C	1.36144E-05	EMP2	-	TRUE	AluSp	SINE,Alu
chr17	74555106	T	C	0.00164	SNHG16	+	FALSE
chr15	45775144	T	C	0.00867	SLC30A4	-	TRUE	AluJr	SINE,Alu
chr1	16939857	C	T	0.00091	NBPF1	-	FALSE
chr16	28620957	T	C	0.00753	SULT1A1	-	TRUE	AluJr	SINE,Alu
chr19	10602447	C	T	0.00878	KEAP1	-	FALSE
chr4	83351845	G	T	0.00422	ENOPH1	+	FALSE
chr1	47844500	T	G	0.00169	CMPK1	+	FALSE
chr1	160112340	A	G	0.00374	ATP1A2	+	TRUE	AluSx3	SINE,Alu
chr3	12877522	A	T	0.00956	RPL32	-	FALSE
chr1	10518688	T	C	0.00154		.	FALSE	AluSx1	SINE,Alu
chr1	931807	G	A	0.00578		.	FALSE
chr1	24286327	G	A	0.00053	PNRC2	+	FALSE
chr1	148753329	A	G	7.42327E-05		.	FALSE
chr17	17971644	G	T	0.00154	GID4	+	FALSE
chr1	154554940	G	C	0.00032	ADAR	-	FALSE
chr1	78142856	T	C	0.00086	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr1	36530674	A	G	0.00603		.	FALSE	AluSg	SINE,Alu
chr2	61277486	A	G	0.00355	PEX13	+	TRUE	AluSx	SINE,Alu
chr6	31321883	G	A	0.00000		.	FALSE
chr1	231557138	C	G	0.00394	EGLN1	-	FALSE
chr4	184238324	G	A	0.00870	WWC2	+	FALSE
chr1	109181317	C	G	0.00166	FAM102B	+	FALSE
chr1	146649884	T	A	0.00612	PDIA3P1	+	FALSE
chr1	40213234	A	G	0.00146	PPIE	+	TRUE	AluSx3	SINE,Alu
chr12	69237057	A	G	0.00259	MDM2	+	TRUE
chr3	45721874	A	G	0.00296	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	19984461	C	T	0.00112	MINOS1-NBL1,NBL1	+	FALSE
chr5	74063154	C	G	0.00255	GFM2,NSA2	+,-	FALSE
chr2	204082516	G	A	0.00094	NBEAL1	+	FALSE
chr1	89447720	G	A	0.00497	KYAT3,RBMXL1	-	FALSE
chr8	17087341	C	A	0.00197	CNOT7	-	FALSE
chr14	19684445	A	G	0.00351	DUXAP10	+	FALSE
chr1	21100862	C	A	0.00012	HP1BP3	-	FALSE	(AC)n	SINE,Alu
chr1	67874689	T	C	1.54545E-05	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	154455949	T	C	0.00416	SHE	-	FALSE
chr1	36067817	T	C	0.00016	PSMB2	-	TRUE	AluSz	SINE,Alu
chr12	32532505	G	A	0.00385		.	FALSE
chr11	119533724	C	G	0.00232	NECTIN1	-	FALSE
chr3	72424929	A	G	0.00988	RYBP	-	FALSE
chr5	125962354	A	G	3.71532E-05	PHAX	+	TRUE	AluSc	SINE,Alu
chr3	86991598	G	T	0.00179	VGLL3	-	FALSE
chr15	83826212	C	T	0.00278	HDGFRP3	-	FALSE	(CTT)n	SINE,Alu
chr1	111969752	A	G	0.00531	OVGP1	-	FALSE
chr6	74134804	T	C	0.00386		.	FALSE	AluSz	SINE,Alu
chr1	150771703	T	C	0.00500	CTSK	-	FALSE
chr12	25358969	T	G	0.00965	KRAS	-	FALSE
chr1	89447868	G	T	0.00585	KYAT3,RBMXL1	-	FALSE
chr1	19244904	G	A	0.00487	IFFO2	-	FALSE
chr1	31905887	A	C	0.00221	SERINC2	+	FALSE
chr1	3761479	C	T	0.00226	CEP104	-	FALSE
chr15	39887848	G	A	0.00664	THBS1	+	FALSE
chr1	150619971	G	A	0.00126	GOLPH3L	-	FALSE	AluJo	SINE,Alu
chr1	10518797	T	C	0.00421		.	FALSE	AluSx1	SINE,Alu
chr1	145509570	A	G	0.00037	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	10519787	A	T	0.00037		.	FALSE	(A)n	SINE,Alu
chr1	19665557	A	C	0.00365	CAPZB	-	FALSE
chr1	53712569	C	A	0.00061	LRP8	-	FALSE	(CA)n	SINE,Alu
chr17	61502463	T	G	0.00370	TANC2	+	FALSE
chr2	206984202	T	C	0.00849		.	FALSE	AluSx	SINE,Alu
chr1	36067925	T	C	3.39837E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr6	150046484	T	C	0.00953	NUP43	-	TRUE	AluSq2	SINE,Alu
chr1	203277242	T	C	0.00023	BTG2	+	FALSE
chr17	73940167	T	C	0.00035	ACOX1	-	TRUE	AluJb	SINE,Alu
chr1	36032229	A	C	0.00806	NCDN	+	FALSE
chr5	37290571	T	C	0.00097		.	FALSE	AluSz	SINE,Alu
chr1	27879797	C	A	0.00246	AHDC1	-	FALSE	MIRb	SINE,Alu
chr9	127711532	T	C	0.00018	SCAI	-	TRUE	AluSp	SINE,Alu
chr1	158424898	G	A	0.00153		.	FALSE
chr1	138156	G	T	0.00177	LOC729737	-	FALSE
chr1	25889176	C	T	3.50303E-06	LDLRAP1	+	FALSE
chr9	137330709	G	T	0.00965	RXRA	+	FALSE	(GCTG)n	SINE,Alu
chr5	125961661	A	G	4.29043E-06	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	16933135	G	T	2.86961E-06	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr3	197612430	A	G	0.00052		.	FALSE	AluSp	SINE,Alu
chr1	31905886	C	A	0.00273	SERINC2	+	FALSE
chr1	145688664	A	T	0.00298	NBPF20,NBPF10,RNF115	+	FALSE
chr4	83406544	C	T	0.00328	TMEM150C	-	FALSE
chr1	23833607	A	T	0.00831	E2F2	-	FALSE
chr4	141600320	A	G	0.00179	TBC1D9	-	FALSE
chr1	16944953	T	G	0.00158	CROCCP2	-	FALSE
chr1	28662253	A	G	0.00187	MED18	+	TRUE	AluSq2	SINE,Alu
chr12	98942904	A	G	0.00259	TMPO	+	TRUE	AluSc	SINE,Alu
chr3	73116347	T	A	0.00109	PPP4R2	+	FALSE
chr2	206985727	C	T	0.00786		.	FALSE	MIRc	SINE,Alu
chr7	44918772	T	C	0.00026	PURB	-	FALSE	AluSg	SINE,Alu
chr2	64859679	T	C	0.00824	SERTAD2	-	FALSE
chr19	21366997	A	G	0.00727	ZNF431	+	TRUE	AluSc	SINE,Alu
chr2	28002599	T	A	0.00566	MRPL33	+	FALSE
chr1	28662105	A	G	9.98367E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	6583138	T	C	0.00010	NOL9	-	TRUE	AluSx4	SINE,Alu
chr3	98518158	A	T	1.44910E-06	DCBLD2	-	FALSE
chr1	94351062	T	A	0.00189	GCLM	-	FALSE
chr1	27248275	C	T	0.00047	NUDC	+	FALSE
chr1	27182751	C	A	0.00122		.	FALSE
chr2	37334184	T	A	0.00202	EIF2AK2	-	FALSE	AluSz	SINE,Alu
chr1	26755229	A	G	0.00318	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr1	16932144	A	C	7.50683E-06	NBPF1	-	FALSE
chr1	6583066	T	C	0.00180	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	157043632	C	T	0.00085		.	FALSE
chr1	9331101	A	G	0.00026	H6PD	+	FALSE	AluSx	SINE,Alu
chr3	148863151	A	G	0.00062	HPS3	+	FALSE
chr1	36068325	T	C	0.00638	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	26604691	G	C	0.00043	CEP85	+	FALSE
chr1	10519951	T	C	0.00378		.	FALSE	AluJr	SINE,Alu
chr1	87213188	C	A	0.00236	SH3GLB1	+	FALSE
chr6	37142192	C	T	0.00850	PIM1	+	FALSE
chr2	183643241	C	A	0.00108	DNAJC10	+	FALSE
chr1	54231847	A	C	0.00097	NDC1	-	FALSE
chr1	16890071	G	A	0.00246	NBPF1	-	FALSE
chr3	156259331	T	C	0.00088	SSR3	-	TRUE	AluSq2	SINE,Alu
chrX	23721424	G	C	0.00651		.	FALSE
chr2	204301757	C	T	0.00999	RAPH1	-	FALSE
chr2	203744550	T	C	0.00037		.	FALSE	AluSx1	SINE,Alu
chr1	23847464	C	A	0.00895	E2F2	-	FALSE
chr1	210416438	C	A	0.00085	SERTAD4	+	FALSE
chr3	14986138	T	C	1.80576E-11	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	54692358	G	A	0.00195	SSBP3	-	FALSE
chr4	17803616	T	C	4.59289E-05	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	92862457	A	G	0.00974		.	FALSE	AluSp	SINE,Alu
chr2	68402794	T	G	0.00630	PNO1	+	FALSE
chr1	19542679	T	C	0.00738	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr12	56215103	A	T	0.00353	DNAJC14	-	FALSE
chr4	1305799	C	T	0.00271	MAEA	+	FALSE
chr1	115313051	T	C	0.00853	SIKE1	-	FALSE
chr1	246714587	G	A	0.00023	TFB2M	-	FALSE
chr2	105881071	C	A	0.00851	TGFBRAP1	-	FALSE
chr1	36068278	T	C	0.00068	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	101186088	C	T	0.00817	PDCL3	+	FALSE
chr2	227597207	T	C	0.00209	IRS1	-	FALSE	(TA)n	SINE,Alu
chr1	204189357	C	T	0.00835	PLEKHA6	-	FALSE
chr19	17414126	C	T	0.00029	ABHD8	-	FALSE
chr2	1637201	C	T	5.10703E-15	PXDN	-	FALSE
chr5	125961079	A	G	0.00258	PHAX	+	TRUE	AluSz	SINE,Alu
chr1	32697063	T	C	0.00035	EIF3I	+	FALSE	AluSp	SINE,Alu
chr1	45474230	G	A	0.00012	HECTD3	-	FALSE
chr1	9163839	A	G	0.00237		.	FALSE
chr1	10521254	T	C	0.00684	DFFA	-	TRUE	AluY	SINE,Alu
chr1	51822219	G	A	0.00325	EPS15	-	FALSE
chrX	77083941	T	C	0.00271	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	36068276	T	C	0.00110	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	86049392	C	A	0.00322	CYR61	+	FALSE
chr1	120497841	T	C	0.00673	NOTCH2	-	FALSE
chr1	20519808	G	A	0.00882	UBXN10	+	FALSE
chr1	45976268	G	A	0.00168	MMACHC	+	FALSE
chr19	53155674	T	C	1.27993E-05	ZNF83	-	TRUE	AluSg	SINE,Alu
chrX	135300092	T	C	0.00075	MAP7D3	-	TRUE	AluSz	SINE,Alu
chr5	149823795	A	T	0.00722	RPS14	-	FALSE
chr1	67874731	T	C	0.00125	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr5	37289087	T	C	4.02459E-05		.	FALSE	AluSp	SINE,Alu
chr14	74526975	T	C	0.00024	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr1	100489619	A	G	0.00319	SLC35A3	+	TRUE
chr19	57802824	G	A	0.00924	ZNF460	+	FALSE
chr1	17735300	C	A	0.00128	RCC2	-	FALSE
chr1	93602673	C	T	0.00252	MTF2	+	FALSE
chr1	19542310	T	C	9.10228E-06	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chrX	16781687	A	G	0.00298		.	FALSE	AluSx1	SINE,Alu
chr12	125511961	A	G	1.08093E-06	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	38275802	T	C	2.04657E-06	MTF1	-	FALSE
chr1	32801745	A	G	0.00357	MARCKSL1	-	FALSE
chr1	6283273	T	C	0.00109	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	37328013	T	C	0.00765		.	FALSE
chr3	124950419	C	A	0.00060	ZNF148	-	FALSE
chr3	184766301	T	C	0.00025	VPS8	+	FALSE
chr2	128063526	C	A	0.00759	MAP3K2	-	FALSE
chr1	204525548	A	G	0.00501	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	222907790	C	T	0.00253	BROX	+	FALSE
chr1	204521580	A	G	0.00469	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	205687351	T	C	2.02150E-05	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	67468124	G	C	0.00201	SLC35D1	-	FALSE
chr14	31916784	T	C	2.67040E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	949472	G	A	2.93477E-10	ISG15	+	FALSE
chr1	47142539	T	A	0.00066	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr1	145511983	A	G	0.00596	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	12677547	G	A	0.00015	DHRS3	-	FALSE	(A)n	SINE,Alu
chr1	19954014	G	T	0.00055	MINOS1,MINOS1-NBL1	+	FALSE	L2c	SINE,Alu
chr2	55516090	C	T	0.00643	CCDC88A	-	FALSE
chr14	53242652	T	C	0.00081	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr2	202029998	T	A	0.00350	CFLAR	+	FALSE	(TTA)n	SINE,Alu
chrX	24095325	A	G	7.48023E-10	EIF2S3	+	TRUE	AluSx	SINE,Alu
chr1	1421186	C	T	0.00834	ATAD3B	+	FALSE
chr3	196729939	C	T	0.00862	MELTF,MFI2-AS1	+,-	FALSE	G-rich	SINE,Alu
chr2	8823952	T	G	1.04377E-05	ID2	+	FALSE
chr1	109475572	A	G	0.00096	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr8	42043493	G	A	0.00045	PLAT	-	FALSE	MLT2C1	SINE,Alu
chr1	179044100	A	G	0.00487	FAM20B	+	TRUE	AluSx	SINE,Alu
chr16	57505656	T	G	0.00107	POLR2C	+	FALSE	(GGTGGG)n	SINE,Alu
chr12	69237020	A	G	0.00378	MDM2	+	TRUE
chr1	118167515	C	T	3.85084E-05	FAM46C	+	FALSE
chr3	172115476	A	G	0.00892	FNDC3B	+	FALSE	(A)n	SINE,Alu
chr17	65335477	T	C	2.02482E-05	PSMD12	-	TRUE	AluSx	SINE,Alu
chr2	242384368	G	A	0.00031	FARP2	+	FALSE	AluJr	SINE,Alu
chr1	3546132	G	A	0.00113	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr1	145360700	C	T	0.00134	NBPF20,NBPF10	+	FALSE
chr3	75779644	C	A	0.00177	ZNF717	-	FALSE
chr1	6282587	T	C	7.24363E-07	ICMT	-	TRUE
chr2	37331038	T	C	4.65669E-05		.	FALSE	AluSx1	SINE,Alu
chr19	23926877	A	T	0.00896	ZNF681	-	FALSE
chr1	16890421	G	A	0.00024	NBPF1	-	FALSE
chr15	32820880	C	G	0.00672	WHAMMP1	-	FALSE
chr3	156259299	T	C	0.00097	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	145512014	A	G	0.00144	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	10520378	T	C	8.57705E-06		.	FALSE	AluSx1	SINE,Alu
chr6	34845648	T	C	0.00790	TAF11	-	FALSE
chr3	52567617	A	G	0.00025	NT5DC2	-	FALSE	G-rich	SINE,Alu
chr1	145500917	G	C	0.00930	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	89479063	G	A	0.00076	GBP3	-	FALSE
chr2	91805938	A	G	0.00000		.	FALSE	MLT1H1	SINE,Alu
chr3	98307696	T	G	3.25383E-09	CPOX	-	FALSE
chr2	101622884	C	A	0.00387	RPL31	+	FALSE
chr13	111301048	T	C	0.00037	CARS2	-	FALSE
chr2	191799592	A	G	2.07606E-11	GLS	+	TRUE
chr1	184762627	T	C	0.00416	FAM129A	-	TRUE	AluSz	SINE,Alu
chr5	135513089	T	A	7.47633E-06	SMAD5	+	FALSE
chr14	50792966	A	T	0.00852		.	FALSE	AluSx	SINE,Alu
chr2	85546320	G	T	0.00749	TGOLN2	-	FALSE	AluSc	SINE,Alu
chr5	118811533	G	A	0.00781	HSD17B4	+	FALSE
chr19	46289409	C	T	6.23760E-05	DMWD	-	FALSE
chr6	42857031	A	G	0.00022	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr3	197611095	A	G	0.00694		.	FALSE	AluSx1	SINE,Alu
chr1	16889413	T	C	8.21040E-06	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	33148691	A	G	0.00207	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	100440553	A	G	0.00179	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr1	28825331	A	G	1.84239E-05	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	19198414	G	A	0.00028	ALDH4A1	-	FALSE
chr2	37329300	T	C	0.00925		.	FALSE	AluJr4	SINE,Alu
chr13	25473685	C	T	0.00580	CENPJ	-	FALSE
chr7	102277600	T	C	0.00240	POLR2J2,UPK3BL	-	TRUE	AluSc	SINE,Alu
chr1	79356178	C	A	0.00678	ADGRL4	-	FALSE
chr3	20025662	T	G	0.00028	RAB5A,PP2D1	+,-	FALSE
chr11	125525572	A	C	0.00016	CHEK1	+	FALSE
chr1	156565057	T	C	0.00423	GPATCH4	-	FALSE
chr15	42550349	A	C	0.00120	TMEM87A	-	FALSE
chr1	10521162	T	C	0.00911	DFFA	-	TRUE	AluY	SINE,Alu
chr7	920724	A	G	0.00328	GET4	+	TRUE	AluSx1	SINE,Alu
chr1	53290057	A	G	0.00142	ZYG11B	+	TRUE	AluSg4	SINE,Alu
chr1	25894468	C	G	0.00357	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr2	50148477	C	T	0.00741	NRXN1	-	FALSE
chr2	217366499	A	G	0.00063		.	FALSE	AluSz	SINE,Alu
chr5	133738270	T	C	0.00067	CDKN2AIPNL	-	TRUE	FRAM	SINE,Alu
chr2	46808168	C	T	0.00377	RHOQ	+	FALSE
chr1	27107950	G	A	0.00249	ARID1A	+	FALSE
chr16	75479484	T	C	1.12347E-07	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	6659505	G	A	0.00196	KLHL21	-	FALSE
chr4	17629926	C	T	0.00319		.	FALSE	MER90	SINE,Alu
chrX	77083952	T	C	0.00045	MAGT1	-	TRUE	AluSz	SINE,Alu
chr2	170403030	T	C	0.00294	FASTKD1	-	FALSE
chr5	38478062	A	T	0.00914	LIFR	-	FALSE
chr1	54493197	T	C	0.00148	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr3	45125417	G	A	0.00024	CDCP1	-	FALSE	AluJb	SINE,Alu
chr12	98942695	A	G	0.00204	TMPO	+	TRUE	AluSc	SINE,Alu
chr19	19793875	A	G	0.00198	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr4	128758152	A	G	0.00198		.	FALSE	AluSx	SINE,Alu
chr1	59004766	G	T	0.00213	OMA1	-	FALSE
chr2	37328034	T	C	8.99638E-05		.	FALSE
chr1	25169634	A	G	0.00843	CLIC4	+	FALSE
chr1	200521297	C	T	0.00133	KIF14	-	FALSE	(T)n	SINE,Alu
chr1	44071221	G	A	0.00105	PTPRF	+	FALSE
chr2	100897573	G	A	0.00231	LONRF2	-	FALSE
chr1	47716039	A	G	0.00863	STIL	-	FALSE
chr2	37328082	T	C	0.00530		.	FALSE
chr1	26755643	A	G	0.00955	LIN28A	+	FALSE	AluSc	SINE,Alu
chr1	120572572	C	T	0.00497	NOTCH2	-	FALSE
chr2	152132130	A	G	6.12116E-05	NMI	-	FALSE
chr2	103332887	T	A	0.00515	MFSD9	-	FALSE	L2d2	SINE,Alu
chr1	148751869	A	G	0.00011		.	FALSE
chr1	120165040	T	C	0.00195	ZNF697	-	FALSE
chr2	44459528	G	A	0.00100	PPM1B	+	FALSE
chr1	36770605	C	T	0.00041	THRAP3	+	FALSE	(T)n	SINE,Alu
chr14	102547384	A	T	0.00403	HSP90AA1	-	FALSE
chr19	11256725	T	C	0.00096	SPC24	-	TRUE	AluJr4	SINE,Alu
chr1	38002251	G	C	0.00624	SNIP1	-	FALSE
chr2	86364710	T	C	0.00273	PTCD3	+	FALSE
chr1	1594977	T	C	7.82676E-05	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu

RBP	U2AF2
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR904CJQ
Platform	HiSeq
Pubmed ID	32252787

U2AF2 - Target Gene Network