RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	189713205	T	C	4.97145E-05	P3H2	-	FALSE
chr20	25428587	A	G	0.00137	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	40537941	A	C	0.00216	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	237065583	G	T	0.00959	MTR	+	FALSE
chr14	36784095	C	T	0.00866	MBIP	-	FALSE
chr2	37328100	T	C	0.00027		.	FALSE
chr1	26143726	G	T	0.00560	SEPN1	+	FALSE	AluSx	SINE,Alu
chr2	20450819	T	C	0.00807	PUM2	-	TRUE
chr17	73773311	T	G	0.00474	H3F3B	-	FALSE
chr1	144931330	C	T	0.00194	NBPF20,PDE4DIP	+,-	FALSE
chr1	244219905	G	T	0.00772	ZBTB18	+	FALSE
chr4	57326313	A	G	0.00132	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	144014068	T	C	0.00118		.	FALSE
chr18	212601	C	A	0.00189	USP14	+	FALSE	AluSz	SINE,Alu
chr2	227600369	A	G	0.00577	IRS1	-	FALSE
chr1	35648840	G	T	0.00543	SFPQ	-	FALSE	AluSx3	SINE,Alu
chr1	16932429	C	G	0.00106	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr15	22969232	G	A	0.00017	CYFIP1	+	FALSE
chr1	51738627	A	G	0.00024	RNF11	+	FALSE
chr4	42088291	C	A	0.00000	SLC30A9	+	FALSE
chr1	169101257	A	T	0.00144	ATP1B1	+	FALSE
chr5	32586387	T	C	0.00569	SUB1	+	FALSE
chr5	68850966	G	T	0.00134	OCLN	+	FALSE	AluSx4	SINE,Alu
chr2	86249906	T	C	0.00352	LOC90784	-	TRUE	AluJr	SINE,Alu
chr3	15113656	T	C	1.73787E-06	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	11084103	T	A	0.00162	TARDBP	+	FALSE
chr12	10311392	T	C	0.00177	OLR1	-	FALSE
chr15	40954864	A	G	0.00636	KNL1	+	TRUE
chr2	191745655	C	G	0.00163	GLS	+	FALSE
chr2	24224134	A	G	9.70565E-06		.	FALSE	AluSp	SINE,Alu
chr4	42091668	A	G	0.00430		.	FALSE	AluSp	SINE,Alu
chr1	118068558	G	A	0.00876		.	FALSE
chr1	74672474	G	A	0.00292	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr1	28662205	C	T	0.00010	MED18	+	FALSE	AluSq2	SINE,Alu
chr2	201253956	A	G	1.78964E-05	SPATS2L	+	FALSE
chr3	100083423	T	C	0.00678	TOMM70	-	FALSE	FAM	SINE,Alu
chr1	47074462	A	G	0.00011	MOB3C	-	FALSE
chr1	59122059	G	A	0.00476	MYSM1	-	FALSE
chr1	100489452	A	G	0.00741	SLC35A3	+	TRUE	AluSc	SINE,Alu
chr1	16933631	G	A	0.00442	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr7	65844563	G	A	0.00581	LINC00174	-	FALSE
chr6	43747963	G	C	0.00274	VEGFA	+	FALSE
chr1	143399383	T	A	0.00053		.	FALSE	L1MC4	SINE,Alu
chr1	143399383	T	A	0.00198		.	FALSE	L1MC4	SINE,Alu
chr19	18047216	C	A	0.00113	CCDC124	+	FALSE
chr1	36068295	T	C	0.00057	PSMB2	-	TRUE	AluSc	SINE,Alu
chr16	88891240	C	A	0.00826	GALNS	-	FALSE
chr4	57326960	A	G	2.00220E-09	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	1419768	A	G	0.00189	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr5	43380822	T	C	0.00462	CCL28	-	TRUE	AluJb	SINE,Alu
chr1	212114663	G	A	0.00858	INTS7	-	FALSE
chr11	126147713	C	G	0.00384	FOXRED1	+	FALSE
chr2	73460314	C	T	0.00333	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr3	179306775	C	T	7.88487E-06	MRPL47	-	FALSE
chr9	19063167	C	T	0.00539	HAUS6	-	FALSE
chr2	99772827	A	G	0.00108	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr1	144909956	G	A	0.00310	NBPF20,PDE4DIP	+,-	FALSE
chr2	176042866	A	T	0.00596	ATP5G3	-	FALSE
chr21	34728068	A	G	0.00188	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr1	204524400	A	G	0.00029	MDM4	+	TRUE	AluY	SINE,Alu
chr1	154987526	C	T	0.00218	ZBTB7B	+	FALSE
chr6	134492485	C	T	0.00245	SGK1	-	FALSE
chr2	32533707	A	G	0.00054		.	FALSE	AluSp	SINE,Alu
chr3	194999609	G	T	0.00796	ACAP2	-	FALSE
chr1	19542239	T	C	0.00038	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	26796922	G	C	0.00401	DHDDS	+	FALSE	FLAM_C	SINE,Alu
chr1	17735300	C	A	0.00128	RCC2	-	FALSE
chr1	145511983	A	G	0.00596	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	39453610	C	T	0.00025	RPSA	+	FALSE
chr7	112579815	G	T	0.00997	BMT2	-	FALSE	(CGC)n	SINE,Alu
chr3	15483744	A	G	0.00083	EAF1	+	FALSE
chr2	37328034	T	C	0.00047		.	FALSE
chr1	16723840	G	A	0.00072	SZRD1	+	FALSE
chr2	8823951	A	T	0.00251	ID2	+	FALSE
chr1	113212974	A	T	0.00424	CAPZA1	+	FALSE
chr5	174956493	T	A	0.00466	SFXN1	+	FALSE
chr1	19953132	C	A	0.00910	MINOS1,MINOS1-NBL1	+	FALSE
chr1	116947396	A	G	0.00226	ATP1A1,ATP1A1-AS1	+,-	FALSE
chr1	22852880	G	C	0.00247	ZBTB40	+	FALSE
chr2	207146631	C	A	9.52905E-05	ZDBF2	+	FALSE
chr4	84215880	T	C	4.10546E-05	HPSE	-	TRUE	AluJr	SINE,Alu
chr1	144596317	C	T	0.00020	NBPF20	+	FALSE	AluJb	SINE,Alu
chr2	176792536	G	T	0.00211	LNPK	-	FALSE
chr1	212277616	C	T	0.00248	DTL	+	FALSE
chr3	119212009	G	A	0.00241	POGLUT1	+	FALSE
chr1	16889217	G	C	0.00696	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr1	168220364	A	G	6.18665E-05		.	FALSE	AluSz6	SINE,Alu
chr1	6314743	C	T	6.72719E-05	GPR153	-	FALSE
chr1	201845881	A	G	0.00422	IPO9	+	FALSE
chr1	220231959	T	C	0.00028	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	9160982	T	C	0.00350		.	FALSE	AluJb	SINE,Alu
chr5	140751128	C	G	0.00647	PCDHGA1,PCDHGA2,PCDHGA3,PCDHGB1,PCDHGA4,PCDHGB2,PCDHGA5,PCDHGB3	+	FALSE
chr1	55319888	T	G	0.00000	DHCR24	-	FALSE
chr1	46774783	A	G	0.00163	UQCRH	+	FALSE	(AGG)n	SINE,Alu
chr1	28150601	A	T	0.00382	STX12	+	FALSE
chr3	141164940	C	A	0.00194	ZBTB38	+	FALSE
chr1	172410967	G	A	1.85684E-05	C1orf105,PIGC	+,-	FALSE
chr1	114940230	T	G	0.00413	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	27212513	T	C	0.00260	GPN2	-	FALSE
chr1	93298756	T	C	0.00264	FAM69A,RPL5	+,-	FALSE	MER5C	SINE,Alu
chr1	16889414	T	C	0.00384	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr3	194790434	C	G	0.00705	XXYLT1	-	FALSE
chrX	123047170	A	G	0.00855	XIAP	+	FALSE	AluSx	SINE,Alu
chr3	44772983	C	T	0.00795	ZNF501	+	FALSE
chr1	46075189	C	A	0.00597	NASP	+	FALSE	A-rich	SINE,Alu
chr1	1570921	C	T	0.00411	CDK11B	-	FALSE
chr2	217366901	A	G	0.00143		.	FALSE	AluSz6	SINE,Alu
chr1	89271574	T	C	3.83690E-05	PKN2	+	FALSE
chr15	41590973	A	G	1.61675E-06	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	27202831	T	C	0.00392		.	FALSE	AluSq2	SINE,Alu
chr1	145688956	A	G	0.00155	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr5	171533782	T	C	0.00039	STK10	-	FALSE
chr6	118029818	T	G	0.00119	NUS1	+	FALSE
chr17	78226862	A	C	0.00590	SLC26A11	+	FALSE
chr1	28826085	A	G	0.00196	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr15	90819579	A	G	0.00933		.	FALSE	AluSx	SINE,Alu
chr5	38478065	T	A	0.00049	LIFR	-	FALSE
chr1	100657416	C	T	0.00102	DBT	-	FALSE	AluJb	SINE,Alu
chr1	109240641	T	A	0.00090	PRPF38B	+	FALSE
chr4	25278988	T	C	2.09007E-08	PI4K2B	+	FALSE
chr12	53435277	G	T	2.75857E-05	EIF4B	+	FALSE
chr5	37290323	T	C	0.00029		.	FALSE	AluSz	SINE,Alu
chr4	10443060	T	G	0.00167	ZNF518B	-	FALSE
chrX	135300016	T	C	0.00358	MAP7D3	-	TRUE	AluSz	SINE,Alu
chr1	10042988	A	G	0.00359	NMNAT1	+	TRUE	AluSc	SINE,Alu
chrM	10307	A	C	0.00046		.	FALSE
chr1	16932931	C	A	0.00169	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr5	149829073	A	G	0.00866	RPS14	-	FALSE
chr19	24103951	A	G	0.00082	ZNF726	+	TRUE	AluSg4	SINE,Alu
chr2	3627302	A	T	0.00021	RPS7	+	FALSE
chr1	87811105	G	A	0.00025	LMO4	+	FALSE
chr1	24785393	C	T	0.00837	NIPAL3	+	FALSE
chr1	28261662	A	G	0.00872	SMPDL3B	+	FALSE
chr1	1469782	G	C	0.00544	ATAD3A	+	FALSE
chr3	48787094	T	C	0.00518	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr3	14986150	T	C	7.09959E-07	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	20826781	C	T	0.00110	MUL1	-	FALSE
chr1	36068370	T	C	0.00789	PSMB2	-	TRUE	AluSc	SINE,Alu
chr7	152342445	T	C	0.00059		.	FALSE	AluJo	SINE,Alu
chr2	37333930	T	C	0.00073	EIF2AK2	-	FALSE	AluSz	SINE,Alu
chr1	86816600	A	G	0.00830	ODF2L	-	FALSE	L1PA7	SINE,Alu
chr3	42826041	T	G	0.00019	HIGD1A	-	FALSE
chr7	128607384	G	A	0.00925	TNPO3	-	FALSE
chr1	10518613	A	T	0.00819		.	FALSE	AluSx1	SINE,Alu
chr1	184762524	T	C	0.00260	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	10520076	T	C	0.00763		.	FALSE	AluSx	SINE,Alu
chr18	10691357	G	A	0.00082	PIEZO2	-	FALSE
chr1	92862896	A	G	6.86172E-05		.	FALSE	AluJr	SINE,Alu
chr3	182639121	A	G	0.00048	ATP11B	+	FALSE
chr1	11846104	C	T	0.00297	C1orf167,MTHFR	+,-	FALSE	L1ME4a	SINE,Alu
chr1	181026558	G	A	0.00217	MR1	+	FALSE
chr17	48771484	C	A	0.00737	ANKRD40	-	FALSE	AluSz	SINE,Alu
chr1	156675377	G	C	0.00935	CRABP2	-	FALSE
chr3	63996262	C	T	0.00273	PSMD6-AS2,PSMD6	+,-	FALSE
chr1	100440553	A	G	9.79324E-05	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr2	86250013	T	C	0.00867	LOC90784	-	TRUE	AluSx	SINE,Alu
chr1	118420452	C	G	0.00713	GDAP2	-	FALSE
chr10	47221465	T	C	0.00201		.	FALSE	AluJb	SINE,Alu
chr4	56236480	T	A	0.00967	SRD5A3,SRD5A3-AS1	+,-	FALSE
chr1	33071096	A	G	0.00692	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr5	77655392	T	C	0.00080	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu
chr10	100177984	C	T	6.55965E-05	HPS1	-	FALSE
chr6	158517308	A	G	0.00959	SYNJ2	+	FALSE
chr3	160969268	C	T	0.00375	NMD3	+	FALSE
chr22	18572597	A	G	0.00322	PEX26	+	TRUE	AluYf1	SINE,Alu
chr1	118472382	G	T	0.00029	WDR3	+	FALSE
chr16	81064533	A	G	0.00686	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	179829096	T	C	4.38746E-06	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	241795525	A	G	0.00165	OPN3,CHML	-	FALSE	THE1B	SINE,Alu
chr10	75008845	T	C	4.48613E-05	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chrX	3526615	G	T	0.00820	PRKX	-	FALSE
chr3	22424406	A	T	0.00760		.	FALSE
chr17	43471481	G	A	0.00412		.	FALSE
chr2	43625184	T	A	0.00587	THADA	-	FALSE
chr1	145689025	A	G	0.00541	NBPF20,NBPF10	+	TRUE	AluSc8	SINE,Alu
chr7	135291501	T	C	0.00627	NUP205	+	FALSE
chr1	200375835	G	T	0.00063	ZNF281	-	FALSE	(T)n	SINE,Alu
chr14	75202287	T	C	0.00757	FCF1	+	FALSE	AluSc	SINE,Alu
chr1	146649854	C	T	0.00033	PDIA3P1	+	FALSE
chr7	65619242	A	G	0.00545	CRCP	+	TRUE	AluSz6	SINE,Alu
chr2	206981832	T	C	0.00251		.	FALSE	AluJb	SINE,Alu
chr1	148556784	G	A	0.00543		.	FALSE
chr4	17803568	T	C	0.00044	DCAF16	-	TRUE	AluY	SINE,Alu
chr14	19685015	C	G	0.00069	DUXAP10	+	FALSE
chr4	3514695	A	G	1.35580E-12	LRPAP1	-	FALSE
chr1	6582701	T	C	1.54245E-05	NOL9	-	TRUE	AluSg	SINE,Alu
chr1	145688664	A	T	0.00298	NBPF20,NBPF10,RNF115	+	FALSE
chr3	12940346	G	A	0.00411	IQSEC1	-	FALSE
chr1	233518885	T	C	0.00021	MLK4	+	FALSE	(TTTC)n	SINE,Alu
chr1	9160975	T	C	0.00858		.	FALSE	AluJb	SINE,Alu
chr4	39551976	T	C	0.00041	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	120286837	A	G	0.00153	PHGDH	+	FALSE
chr1	16928737	C	T	0.00448	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	10521238	T	C	0.00797	DFFA	-	TRUE	AluY	SINE,Alu
chr1	212273639	C	T	0.00710	DTL	+	FALSE
chr2	39210398	A	T	0.00180	SOS1	-	FALSE
chr1	44423703	C	T	1.17684E-14	IPO13	+	FALSE
chr1	45976723	T	C	0.00239	MMACHC,PRDX1	+,-	FALSE
chr2	201676441	G	A	0.00140	LOC101927795,BZW1	+,-	FALSE
chr1	165370475	G	C	0.00256	RXRG	-	FALSE
chr1	145689693	A	G	0.00088	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr2	217366195	C	A	0.00929		.	FALSE
chr1	10521172	T	C	0.00178	DFFA	-	TRUE	AluY	SINE,Alu
chr19	21304019	A	G	0.00111	ZNF714	+	TRUE	AluY	SINE,Alu
chr1	92195511	C	T	0.00681	TGFBR3	-	FALSE
chr3	49395693	C	G	0.00243	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr4	119526740	C	G	0.00435	LOC729218	+	FALSE
chr2	109401259	C	T	0.00889	RANBP2	+	FALSE
chr1	218617066	A	T	0.00211	TGFB2-OT1,TGFB2	+	FALSE
chr1	46164493	T	C	0.00822	IPP	-	TRUE	AluJb	SINE,Alu
chr3	17200677	T	G	0.00371	TBC1D5	-	FALSE
chr1	144828765	A	T	0.00976	NBPF20,NBPF9	+	FALSE
chr3	69038160	G	A	0.00557	EOGT	-	FALSE
chr2	37329300	T	C	0.00092		.	FALSE	AluJr4	SINE,Alu
chr5	138705183	T	A	9.01084E-05	PAIP2,SLC23A1	+,-	FALSE
chr1	225683182	C	T	0.00056	ENAH	-	FALSE
chr1	28836872	A	G	0.00019	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr3	141667632	T	G	1.45044E-05	TFDP2	-	FALSE
chr1	21810586	C	T	0.00540	NBPF3	+	FALSE
chr7	44618353	T	C	0.00168	TMED4	-	TRUE	AluSq2	SINE,Alu
chr4	2516791	T	G	4.75740E-05	RNF4	+	FALSE
chr4	2940164	T	C	0.00381	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr14	74524774	T	C	0.00481	BBOF1,ALDH6A1	+,-	FALSE	AluSc8	SINE,Alu
chr2	37328075	T	C	0.00335		.	FALSE
chr3	129033736	T	C	0.00309	H1FX	-	FALSE
chr1	145329095	C	G	0.00261	NBPF20,NBPF10	+	FALSE
chr1	33149414	A	G	0.00990	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr5	41917696	T	A	0.00045	C5orf51	+	FALSE
chr15	23282589	A	G	0.00291	HERC2P2	-	FALSE
chr2	206987229	T	C	0.00743		.	FALSE	AluSx	SINE,Alu
chr1	179044242	A	G	0.00335	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	47141718	T	C	0.00978	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr19	4428790	A	T	0.00000	CHAF1A	+	FALSE
chr1	16717888	G	A	0.00206	SZRD1	+	FALSE
chr1	117910682	G	A	0.00013	MAN1A2	+	FALSE
chr2	17897488	T	C	0.00430	SMC6	-	FALSE
chr2	153512503	C	T	0.00082	PRPF40A	-	FALSE
chr1	19441410	G	A	7.84348E-05	UBR4	-	FALSE
chr6	31947917	C	T	0.00670		.	FALSE
chr1	153507176	C	T	0.00957	S100A6	-	FALSE
chr2	204312707	C	T	0.00154	RAPH1	-	FALSE
chr1	28826190	A	G	0.00233	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr13	110407579	T	G	0.00751	IRS2	-	FALSE	(T)n	SINE,Alu
chr1	100489992	A	G	0.00938	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr1	145281656	A	T	0.00768	NBPF20,NOTCH2NL	+	FALSE
chr2	206987205	T	C	0.00039		.	FALSE	AluSx	SINE,Alu
chr17	57279257	A	G	0.00077	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	65299548	T	A	0.00852	JAK1	-	FALSE
chr1	1595538	T	C	0.00586	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr5	93018883	A	T	0.00181	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr5	37290554	T	C	0.00010		.	FALSE	AluSz	SINE,Alu
chr6	100005419	A	G	2.18273E-06	CCNC	-	FALSE	AluSg	SINE,Alu
chr1	94352646	G	T	0.00645	GCLM	-	FALSE	AluSx1	SINE,Alu
chr1	145284432	G	A	0.00795	NBPF20,NOTCH2NL	+	FALSE
chr7	22981942	G	A	0.00041	FAM126A	-	FALSE
chr2	76672504	A	G	2.97414E-06		.	FALSE	7SK	SINE,Alu
chr1	52498140	G	A	0.00044	TXNDC12,KTI12	-	FALSE
chr15	65442523	G	A	0.00068	CLPX	-	FALSE	AluSg4	SINE,Alu
chr1	1595388	A	G	0.00135	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr19	18476176	A	G	0.00452	PGPEP1	+	TRUE	AluJb	SINE,Alu
chr14	50361164	C	T	0.00103	ARF6	+	FALSE	(T)n	SINE,Alu
chr5	79923361	T	C	0.00013	DHFR	-	TRUE	AluJr	SINE,Alu
chr4	5743512	T	C	0.00045	EVC	+	FALSE
chr2	46612338	T	G	0.00018	EPAS1	+	FALSE
chr6	132780768	G	A	0.00668	STX7	-	FALSE
chr1	27434251	G	A	0.00504	SLC9A1	-	FALSE
chr5	52389811	T	G	0.00561	ITGA2	+	FALSE
chr3	49762662	G	T	6.99764E-06	IP6K1	-	FALSE
chr1	36770045	T	C	0.00488	THRAP3	+	FALSE
chr1	145511998	A	G	0.00715	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	20401855	G	A	0.00107	SDC1	-	FALSE
chr1	145116027	T	C	1.71852E-07	NBPF20,SEC22B	+	FALSE
chr3	160969268	C	T	0.00835	NMD3	+	FALSE
chr11	125452298	A	G	0.00583	EI24,STT3A-AS1	+,-	FALSE
chr4	17804852	T	C	0.00056	DCAF16	-	TRUE	AluSx	SINE,Alu
chr2	161130867	C	A	0.00034	RBMS1	-	FALSE
chr5	70503941	C	A	0.00130		.	FALSE
chr2	74375276	A	C	0.00328	BOLA3-AS1	+	FALSE
chr12	109039004	C	A	0.00564	CORO1C	-	FALSE
chr1	54691922	T	A	0.00415	SSBP3	-	FALSE
chr1	142804438	G	T	0.00522		.	FALSE
chr4	2940485	T	C	2.93326E-08	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	153617980	A	G	8.13079E-05	CHTOP	+	FALSE
chr15	41593268	A	G	0.00084		.	FALSE	AluSz6	SINE,Alu
chr5	61683960	A	G	0.00491		.	FALSE
chr1	36322433	G	A	0.00663	AGO4	+	FALSE
chr16	10623531	T	C	1.32618E-09	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	70718273	A	T	0.00256		.	FALSE
chr2	28002599	T	A	0.00566	MRPL33	+	FALSE
chr1	155282600	A	G	0.00019	FDPS	+	TRUE	AluSp	SINE,Alu
chrX	16781275	A	G	0.00417		.	FALSE	AluJo	SINE,Alu
chr12	133298917	A	G	0.00612	PGAM5	+	TRUE	AluSg	SINE,Alu
chr10	75632760	C	T	0.00013	CAMK2G	-	FALSE
chr2	71411975	A	C	0.00463	PAIP2B	-	FALSE
chr1	19420619	C	G	0.00339	UBR4	-	FALSE
chr1	33149333	A	G	0.00980	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr7	44841799	A	G	0.00693	PPIA	+	TRUE	AluSx	SINE,Alu
chr3	58304244	G	A	0.00560	RPP14	+	FALSE	AluSz	SINE,Alu
chr1	138266	C	T	0.00802	LOC729737	-	FALSE
chr2	242384368	G	A	0.00096	FARP2	+	FALSE	AluJr	SINE,Alu
chr1	86046472	G	T	0.00409	CYR61	+	FALSE
chr6	13788294	T	C	0.00017	MCUR1	-	TRUE	AluSx	SINE,Alu
chr5	31554465	A	T	1.69098E-06	C5orf22	+	FALSE
chr2	207174868	G	A	1.60070E-05	ZDBF2	+	FALSE
chr1	205687358	T	C	0.00692	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	26608015	T	A	3.80922E-07		.	FALSE
chr3	39137789	G	A	0.00579	WDR48	+	FALSE
chr1	6282400	T	C	0.00601	ICMT	-	TRUE	AluSz	SINE,Alu
chr8	56985612	G	T	0.00028	RPS20	-	FALSE
chr8	11701485	T	C	0.00027	CTSB	-	TRUE	AluSx1	SINE,Alu
chr2	48025764	C	T	0.00722	MSH6	+	FALSE
chr1	11783902	A	G	0.00336		.	FALSE	AluSq	SINE,Alu
chr2	61764895	C	A	0.00862	XPO1	-	FALSE	(AC)n	SINE,Alu
chr17	10578246	A	G	0.00093		.	FALSE
chr7	94297301	G	T	0.00145	PEG10	+	FALSE
chr1	145688983	A	G	0.00101	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr2	54896390	G	T	0.00110	SPTBN1	+	FALSE
chr16	11445552	T	C	0.00533	RMI2	+	FALSE
chr2	61315734	A	G	0.00396	KIAA1841	+	TRUE	AluSg	SINE,Alu
chr1	26755643	A	G	0.00955	LIN28A	+	FALSE	AluSc	SINE,Alu
chr1	120839681	C	A	0.00125	FAM72B	+	FALSE
chr1	11347155	C	T	0.00273	UBIAD1	+	FALSE
chr20	54963816	T	C	0.00750	AURKA	-	TRUE	AluSq10	SINE,Alu
chr1	70717293	G	A	0.00716	SRSF11	+	FALSE
chr1	28661665	A	G	0.00808	MED18	+	TRUE	AluSg	SINE,Alu
chr10	72648336	C	T	0.00461	PCBD1	-	FALSE	(GGCCG)n	SINE,Alu
chr1	35644504	A	T	0.00242	SFPQ	-	FALSE
chr1	148003730	T	C	0.00636	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr16	48388258	A	G	8.02686E-05	MIR5095	+	TRUE	AluSz	SINE,Alu
chr1	145511991	A	G	0.00044	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	28826150	A	G	0.00052	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	40537923	G	A	6.08919E-05	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	1550392	C	T	0.00617		.	FALSE	AluSg	SINE,Alu
chr1	1653093	A	G	0.00674	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr14	53243434	T	C	5.94655E-10	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr1	899810	G	A	3.12519E-10	KLHL17	+	FALSE
chr1	3730400	T	C	0.00584	CEP104	-	TRUE	AluSx3	SINE,Alu
chr2	30748507	C	T	0.00103	LCLAT1	+	FALSE
chr1	210025751	G	A	0.00067	DIEXF	+	FALSE	Tigger4a	SINE,Alu
chr1	45976269	C	G	0.00039	MMACHC	+	FALSE
chr2	75882576	T	C	0.00328	MRPL19	+	FALSE
chr1	19542269	T	C	0.00744	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	113334241	A	G	0.00388	POLR1B	+	TRUE
chr4	40631476	C	A	5.49937E-05	RBM47	-	FALSE
chr12	7074517	C	T	0.00369	PHB2	-	FALSE
chr1	6582868	T	C	0.00368	NOL9	-	TRUE	AluSg	SINE,Alu
chr1	19543247	T	C	5.23836E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	111682307	G	C	0.00637	DRAM2,CEPT1	+,-	FALSE
chr1	16933625	A	G	0.00536	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr6	31321806	C	T	6.66134E-15		.	FALSE
chr1	33149363	A	G	0.00237	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	156692052	T	A	0.00369	ISG20L2	-	FALSE	AluY	SINE,Alu
chr1	20976078	T	C	0.00344	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr2	85132777	T	C	1.13350E-06	TMSB10	+	FALSE
chr2	206862015	G	A	0.00026	INO80D	-	FALSE
chr1	45242861	A	G	0.00911	RPS8	+	TRUE	AluSz	SINE,Alu
chr1	32508534	A	G	0.00666	KHDRBS1	+	FALSE
chr7	2394991	C	T	9.93448E-08	EIF3B	+	FALSE
chr3	44487862	G	A	0.00262	ZNF445	-	FALSE
chr3	194124421	A	G	0.00024	ATP13A3	-	FALSE
chr1	35319580	T	A	0.00988	SMIM12	-	FALSE	AluSg	SINE,Alu
chr12	1611798	C	T	0.00338	LINC00942	+	FALSE
chr1	206580231	A	G	0.00100	SRGAP2	+	FALSE

RBP	TRIM25
Knock-Method	siRNA
RBP Family	Non-canonical_RBP
Biosample Name	BT549
Tissue Type	Breast
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE79586
Platform	GPL167891
Pubmed ID	28813674

TRIM25 - Target Gene Network