RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr19	9673275	T	C	0.00081		.	FALSE	Tigger1	SINE,Alu
chr4	52888499	G	A	0.00366	SGCB	-	FALSE
chr10	47221465	T	C	0.00201		.	FALSE	AluJb	SINE,Alu
chr7	44918736	T	C	4.05417E-05	PURB	-	TRUE	AluSg	SINE,Alu
chr16	89623607	A	G	0.00915	SPG7	+	FALSE
chr1	93616202	T	C	0.00194	TMED5	-	FALSE
chr1	201846635	A	T	0.00293	IPO9	+	FALSE	(CA)n	SINE,Alu
chr7	105162638	G	C	0.00155	PUS7	-	FALSE
chr5	130538043	A	G	0.00713	LYRM7	+	TRUE	AluSp	SINE,Alu
chr2	10270757	A	T	0.00382	RRM2	+	FALSE
chr7	156763332	A	G	0.00090	NOM1	+	TRUE	AluSx	SINE,Alu
chr1	78414334	C	A	0.00702	FUBP1	-	FALSE	A-rich	SINE,Alu
chr1	36068052	G	T	1.69686E-12	PSMB2	-	FALSE	L1ME4b	SINE,Alu
chr2	86731654	G	A	0.00931	CHMP3,RNF103-CHMP3	-	FALSE	AluJr	SINE,Alu
chr1	16932429	C	G	0.00221	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	220231347	T	C	0.00963	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr10	13320111	G	T	0.00571	PHYH	-	FALSE
chr2	224622277	T	C	0.00138	AP1S3	-	TRUE	AluSx1	SINE,Alu
chr1	25663918	G	A	0.00951	RSRP1	-	FALSE
chr5	37291508	T	C	0.00430		.	FALSE	AluSx3	SINE,Alu
chr5	34906661	T	C	9.12853E-06	RAD1	-	TRUE	AluJo	SINE,Alu
chr3	15112612	T	C	0.00634	RBSN	-	TRUE	AluSq2	SINE,Alu
chr4	155457051	A	T	0.00378	PLRG1	-	FALSE	L2d2	SINE,Alu
chr9	133777993	G	T	0.00959	FIBCD1	-	FALSE
chr1	67874697	T	C	5.54610E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr16	28296456	T	C	0.00772		.	FALSE	AluJb	SINE,Alu
chr1	16932495	A	C	0.00199	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr2	101622889	T	A	0.00022	RPL31	+	FALSE
chr2	37328027	T	C	0.00026		.	FALSE
chr3	66430372	T	A	0.00300	LRIG1	-	FALSE
chr1	70728523	A	G	0.00051	ANKRD13C	-	FALSE
chr1	71531596	A	G	1.07667E-05	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr1	76227022	A	G	0.00035	ACADM	+	FALSE
chr1	9162348	T	C	0.00359		.	FALSE	AluSx	SINE,Alu
chr1	120162442	T	C	0.00065	ZNF697	-	FALSE
chr1	206579936	A	G	0.00424	SRGAP2	+	FALSE
chr1	19586532	A	G	7.13982E-05	MRTO4	+	TRUE	AluSz	SINE,Alu
chr13	76378459	T	C	0.00239	LMO7	+	FALSE
chr11	93466866	G	T	0.00559	MIR1304	-	FALSE	AluJr	SINE,Alu
chr1	120695197	G	A	2.17750E-05		.	FALSE
chr2	37328097	T	C	3.71887E-07		.	FALSE
chr3	14986098	T	C	0.00996	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr7	131241052	A	G	0.00663	PODXL	-	FALSE	(GGCGAC)n	SINE,Alu
chr1	79356400	C	T	0.00714	ADGRL4	-	FALSE
chr1	160965379	T	C	0.00081	F11R	-	TRUE	AluSc	SINE,Alu
chr16	90037828	G	A	0.00029	CENPBD1	-	FALSE	Tigger12	SINE,Alu
chr2	24225509	A	G	0.00132		.	FALSE	AluSq2	SINE,Alu
chr1	55316322	A	G	0.00266	DHCR24	-	FALSE
chr1	19934893	C	A	0.00171	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr12	64842925	A	G	0.00345		.	FALSE	AluSz	SINE,Alu
chr14	31916783	T	C	3.40362E-05	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	46828460	C	T	0.00393	NSUN4	+	FALSE
chr14	75202704	A	G	2.33511E-06	FCF1	+	TRUE	AluSc	SINE,Alu
chr5	125880589	T	C	0.00122	ALDH7A1	-	FALSE
chr17	42113064	A	G	0.00014	LSM12	-	FALSE	(A)n	SINE,Alu
chr1	17299387	T	A	0.00941	CROCC	+	FALSE
chr1	38155698	G	T	0.00368	C1orf109	-	FALSE	AluSx1	SINE,Alu
chr15	90819579	A	G	0.00933		.	FALSE	AluSx	SINE,Alu
chr1	114940209	G	T	5.13716E-05	TRIM33	-	FALSE	(T)n	SINE,Alu
chr2	219433597	G	A	0.00328	CNOT9	+	FALSE
chr3	195393406	C	T	0.00690	SDHAP2	+	FALSE
chr2	86251114	T	C	0.00709		.	FALSE	AluSx	SINE,Alu
chr1	205687344	C	T	0.00633	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr4	77057501	A	G	0.00547	NUP54	-	FALSE
chr1	19953120	G	A	0.00024	MINOS1,MINOS1-NBL1	+	FALSE
chr5	102345546	A	C	0.00463	PAM	+	FALSE
chr12	133298019	A	G	2.77684E-05	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	6282236	T	C	0.00388	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	26755643	A	G	0.00728	LIN28A	+	FALSE	AluSc	SINE,Alu
chr3	133307642	T	G	0.00523	CDV3	+	FALSE	(TT)n	SINE,Alu
chr5	125961447	A	G	0.00563	PHAX	+	TRUE	AluSz6	SINE,Alu
chr2	242512736	G	C	0.00492	BOK	+	FALSE
chr19	41220529	C	T	0.00175	COQ8B	-	FALSE
chr1	33149443	A	G	2.90388E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr19	39982631	A	G	0.00316	TIMM50	+	TRUE	AluJr	SINE,Alu
chr3	52109841	T	C	7.35943E-05	POC1A	-	FALSE
chr7	920724	A	G	0.00328	GET4	+	TRUE	AluSx1	SINE,Alu
chr15	90819655	A	G	0.00174		.	FALSE	AluSx	SINE,Alu
chr1	148558269	A	G	0.00538	NBPF15	+	FALSE	AluJb	SINE,Alu
chr3	48787684	T	C	0.00813	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr9	136335345	G	A	0.00490	CACFD1	+	FALSE	(TG)n	SINE,Alu
chr12	56215103	A	T	0.00353	DNAJC14	-	FALSE
chr3	40503557	T	C	0.00487	RPL14	+	FALSE
chr1	10518734	T	C	0.00249		.	FALSE	AluSx1	SINE,Alu
chr1	10517314	T	C	0.00073		.	FALSE	AluJr	SINE,Alu
chr1	9162247	T	C	0.00549		.	FALSE	AluSx	SINE,Alu
chr5	72876776	C	A	0.00875	UTP15	+	FALSE
chr6	31626580	G	A	0.00291		.	FALSE
chr14	74431191	A	G	0.00670	ENTPD5	-	FALSE
chr10	23408278	C	T	0.00042	MSRB2	+	FALSE
chr1	54412181	T	C	0.00524	LRRC42	+	FALSE
chr1	6583592	T	C	0.00939	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	54571491	A	G	0.00538	TCEANC2	+	TRUE	AluSc	SINE,Alu
chr3	10290507	G	C	0.00367	TATDN2	+	FALSE
chr6	149912307	A	G	0.00026		.	FALSE	AluSc	SINE,Alu
chr1	10517290	T	C	0.00366		.	FALSE	AluJr	SINE,Alu
chr8	144940792	G	C	9.20360E-05	EPPK1	-	FALSE
chr15	63616881	G	A	0.00026	CA12	-	FALSE
chr3	100428460	G	C	5.60949E-08	TFG	+	FALSE
chr1	117530477	G	A	0.00223	PTGFRN	+	FALSE
chr3	48787094	T	C	0.00518	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	16889624	T	C	0.00614	NBPF1	-	TRUE
chr3	52288956	A	T	0.00042	WDR82	-	FALSE
chr19	4423353	G	A	0.00057	CHAF1A	+	FALSE	GA-rich	SINE,Alu
chr10	5499824	A	G	0.00070	NET1	+	FALSE
chr8	25272447	A	T	0.00770	DOCK5	+	FALSE
chr1	115313038	G	A	0.00144	SIKE1	-	FALSE
chr15	65442483	T	C	0.00523	CLPX	-	TRUE	AluSg4	SINE,Alu
chr14	24760808	C	T	0.00203	DHRS1	-	FALSE
chr2	23865260	T	C	0.00262	KLHL29	+	FALSE
chr2	74333232	C	T	0.00274	TET3	+	FALSE
chr7	128144035	A	G	0.00054		.	FALSE	AluSq2	SINE,Alu
chr1	120611964	G	C	0.00077	NOTCH2	-	FALSE
chr1	46075191	C	A	0.00056	NASP	+	FALSE	A-rich	SINE,Alu
chr7	44841791	C	T	0.00182	PPIA	+	FALSE
chr1	16889014	C	T	0.00722	NBPF1	-	FALSE
chr1	19542464	T	C	0.00736	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr6	160526905	C	A	0.00268	IGF2R	+	FALSE
chr1	32096265	A	G	0.00208	PEF1	-	FALSE
chr6	11577085	C	T	1.34362E-05	TMEM170B	+	FALSE
chr2	203742141	T	C	0.00044		.	FALSE	AluJb	SINE,Alu
chr16	89627988	G	T	5.83717E-06	RPL13	+	FALSE
chr5	70248477	T	A	0.00163	SMN1,SMN2	+	FALSE	L1MC5a	SINE,Alu
chr19	42375586	A	G	0.00016		.	FALSE	AluSx	SINE,Alu
chr6	38140503	C	T	0.00065	BTBD9	-	FALSE
chr3	98517013	T	C	1.12976E-12	DCBLD2	-	FALSE
chr3	156258295	T	C	0.00096	SSR3	-	TRUE	AluYk3	SINE,Alu
chr5	170837887	T	A	0.00401	NPM1	+	FALSE
chr1	226333558	A	C	0.00052	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr3	124948049	T	C	0.00069	ZNF148	-	TRUE
chr1	10520692	T	C	0.00973	DFFA	-	TRUE	AluSc8	SINE,Alu
chr3	10192642	A	G	0.00714	VHL	+	TRUE	AluSx1	SINE,Alu
chr3	10285030	G	A	0.00384	IRAK2	+	FALSE
chr1	3654747	C	A	0.00691	TP73-AS1	-	FALSE
chr1	10520076	T	C	0.00075		.	FALSE	AluSx	SINE,Alu
chr1	19543282	T	C	0.00020	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	10520984	G	T	0.00305	DFFA	-	FALSE	AluY	SINE,Alu
chr2	217366534	A	G	0.00733		.	FALSE	AluSz	SINE,Alu
chr1	145695329	A	G	0.00400	NBPF20,NBPF10	+	FALSE	AluSz	SINE,Alu
chr6	42855101	A	G	0.00329	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr2	206986949	T	C	0.00693		.	FALSE	AluJr	SINE,Alu
chr1	22419433	T	G	0.00156	CDC42	+	FALSE
chr13	79188534	T	A	0.00698	RNF219-AS1,RNF219	+,-	FALSE
chr3	11598816	C	A	0.00118	ATG7,VGLL4	+,-	FALSE
chr1	24935369	A	G	0.00454	NCMAP	+	TRUE	AluJb	SINE,Alu
chr1	19543459	T	C	0.00074	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	104097685	C	T	0.00721	RNPC3,AMY2B	+	FALSE
chr3	53260620	T	G	0.00069	TKT	-	FALSE
chr1	94335332	G	T	0.00973	DNTTIP2	-	FALSE
chr15	33064474	G	C	0.00653	FMN1	-	FALSE
chr1	1721936	G	A	0.00731	GNB1	-	FALSE
chr2	85554792	C	A	0.00634	TGOLN2	-	FALSE
chr1	21806710	T	G	0.00194	NBPF3	+	FALSE
chr3	183889337	A	T	3.46641E-05	DVL3	+	FALSE
chr1	110023610	G	A	0.00636	SYPL2	+	FALSE
chr19	9673005	T	C	0.00017		.	FALSE	AluSx3	SINE,Alu
chr1	26608012	C	A	0.00564	SH3BGRL3	+	FALSE
chr1	179044110	A	G	5.39593E-06	FAM20B	+	TRUE	AluSx	SINE,Alu
chr16	69338754	T	C	0.00210	SNTB2	+	FALSE	AluJr	SINE,Alu
chr7	44918672	T	C	0.00150	PURB	-	TRUE	AluSg	SINE,Alu
chr7	128142833	A	G	6.82570E-05	METTL2B	+	TRUE	AluSx1	SINE,Alu
chr7	86816663	A	G	0.00103	DMTF1	+	TRUE	AluJr	SINE,Alu
chr1	33066859	A	G	0.00403	ZBTB8A	+	TRUE	AluSq4	SINE,Alu
chr3	196670094	G	C	0.00669	NCBP2-AS2	+	FALSE
chr1	100657328	A	G	0.00682	DBT	-	FALSE	(AC)n	SINE,Alu
chr1	9163839	A	G	0.00237		.	FALSE
chr3	196658640	C	T	0.00444	SENP5	+	FALSE
chr1	169811639	G	C	0.00134	C1orf112	+	FALSE
chr1	25889176	C	T	3.50303E-06	LDLRAP1	+	FALSE
chr14	78390880	T	C	0.00050	ADCK1	+	FALSE
chr1	45976261	T	A	0.00018	MMACHC	+	FALSE
chr11	62299945	A	C	0.00314	AHNAK	-	FALSE
chr1	27202901	T	C	0.00224		.	FALSE	AluSq2	SINE,Alu
chr1	24022437	A	G	0.00342	RPL11	+	FALSE
chr1	145273431	A	G	0.00203	NBPF20,NOTCH2NL	+	FALSE
chr16	10625101	T	C	0.00804	EMP2	-	TRUE	AluSx3	SINE,Alu
chr5	177576460	C	T	0.00635		.	FALSE
chr1	988503	A	T	0.00141	AGRN	+	FALSE
chr5	150647744	A	G	0.00036	GM2A	+	TRUE	AluSc	SINE,Alu
chr1	1647814	T	C	7.10450E-06	CDK11B,CDK11A	-	FALSE
chr5	49692280	T	C	9.73531E-05	EMB	-	FALSE	L2c	SINE,Alu
chr2	174828621	A	C	0.00315	SP3	-	FALSE
chr4	165998692	T	C	0.00568	TMEM192	-	TRUE	AluSg	SINE,Alu
chr6	116256595	C	A	5.71236E-05		.	FALSE
chr2	37506939	A	G	0.00119	PRKD3	-	FALSE
chr1	27434251	G	A	0.00504	SLC9A1	-	FALSE
chr4	17803604	T	C	0.00174	DCAF16	-	TRUE	AluY	SINE,Alu
chr4	10076658	T	C	6.66134E-16	WDR1	-	FALSE
chr2	130795675	C	T	0.00578	FAR2P1	-	FALSE
chr3	39137789	G	A	0.00579	WDR48	+	FALSE
chr17	46025078	A	G	0.00021	PNPO	+	TRUE	AluSc	SINE,Alu
chr10	89005496	T	G	0.00138	NUTM2A-AS1	-	FALSE	MSTB1	SINE,Alu
chr1	40537923	G	A	0.00609	CAP1	+	FALSE	(A)n	SINE,Alu
chr3	44791454	A	T	3.12862E-05	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr1	145512166	T	A	0.00736	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	16889414	T	C	0.00012	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr2	201842492	T	C	0.00107	FAM126B	-	TRUE	AluJb	SINE,Alu
chr13	96506664	A	G	5.36176E-05	UGGT2	-	FALSE
chr2	196602326	T	G	0.00503	SLC39A10	+	FALSE
chr1	114515903	C	T	0.00169	HIPK1	+	FALSE
chr1	145511998	A	G	0.00675	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr4	68484330	G	A	0.00131	UBA6	-	FALSE
chr1	19586532	A	G	0.00166	MRTO4	+	TRUE	AluSz	SINE,Alu
chr4	39550558	T	C	0.00441	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr1	16927391	T	C	0.00110	NBPF1	-	FALSE
chr9	14764	C	T	0.00491	WASH1	-	FALSE
chr1	16890639	C	T	8.47214E-05	NBPF1	-	FALSE
chr2	85776832	C	T	0.00514	GGCX	-	FALSE
chr1	145513098	A	G	0.00514	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr16	2553869	A	T	0.00089	TBC1D24	+	FALSE
chr4	188925184	G	A	0.00032	ZFP42	+	FALSE
chr1	179044100	A	G	0.00219	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	120612037	T	G	0.00044	NOTCH2	-	FALSE	(CGC)n	SINE,Alu
chr19	42376872	A	G	0.00647		.	FALSE	AluSp	SINE,Alu
chr1	144821888	C	G	0.00093	NBPF20,NBPF9	+	FALSE
chr1	46159809	T	A	0.00605	TMEM69	+	FALSE
chr2	55516908	A	G	0.00016	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	1594977	T	C	0.00487	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr20	25428308	A	G	0.00185	GINS1	+	TRUE	AluSz	SINE,Alu
chr2	99812311	A	G	0.00016	MRPL30	+	TRUE	AluSx	SINE,Alu
chr6	17557412	C	T	0.00986	CAP2	+	FALSE
chr1	1309885	A	G	0.00010	AURKAIP1	-	FALSE
chr11	65404870	C	T	0.00160	PCNX3	+	FALSE
chr1	36068295	T	C	0.00058	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	53288894	A	G	8.27269E-06	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	62380298	G	A	0.00025	PATJ	+	FALSE
chr3	30735330	G	T	0.00402	TGFBR2	+	FALSE
chr1	6584872	T	C	9.65243E-06	NOL9	-	TRUE	AluYk2	SINE,Alu
chr5	37290554	T	C	0.00010		.	FALSE	AluSz	SINE,Alu

RBP	METTL14
Knock-Method	siRNA
RBP Family	MT-A70
Biosample Name	HEK293
Tissue Type	Kidney
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE56010
Platform	GPL11154
Pubmed ID	25719671

METTL14 - Target Gene Network