RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr19	42753649	G	C	0.00723	ERF	-	FALSE
chr3	15114385	T	C	0.00146	RBSN	-	TRUE	AluY	SINE,Alu
chrX	77083116	T	C	0.00658	MAGT1	-	TRUE	AluSg	SINE,Alu
chr15	90820171	A	G	0.00185		.	FALSE
chr5	77655330	T	C	0.00050	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu
chr1	149913731	T	C	0.00198	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr3	16301148	T	C	0.00050	DPH3	-	FALSE
chr7	22765456	G	T	5.19964E-05	LOC541472	-	FALSE
chr1	109476780	C	T	0.00990	GPSM2,CLCC1	+,-	FALSE
chr1	11084103	T	A	0.00146	TARDBP	+	FALSE
chr1	53289892	A	G	0.00178	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	179041693	T	C	0.00845	FAM20B	+	FALSE
chr1	205056844	T	A	0.00225	RBBP5	-	FALSE
chr2	37330476	T	C	0.00269		.	FALSE	AluSq2	SINE,Alu
chr3	40578815	A	G	0.00041	ZNF621	+	FALSE	AluJr	SINE,Alu
chr5	130537933	A	G	0.00084	LYRM7	+	TRUE	AluSp	SINE,Alu
chr9	136209396	C	T	0.00126	MED22	-	FALSE
chr1	949472	G	A	9.07885E-12	ISG15	+	FALSE
chr3	179117270	T	C	0.00478	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	33149443	A	G	0.00327	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	36299630	A	G	0.00828	AGO4	+	FALSE
chr1	949472	G	A	2.93477E-10	ISG15	+	FALSE
chr21	33974092	G	C	0.00865	C21orf59	-	FALSE
chr1	179042482	A	G	1.77761E-07	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	40219280	T	C	0.00025	PPIE	+	FALSE
chrX	2825075	T	C	0.00410	ARSD	-	TRUE	AluSx1	SINE,Alu
chr5	112312528	T	C	0.00827	DCP2	+	FALSE
chr1	10520715	T	C	0.00119	DFFA	-	TRUE	AluSc8	SINE,Alu
chr3	10192672	G	A	5.82875E-07	VHL	+	FALSE	AluSx1	SINE,Alu
chr1	182360930	A	G	0.00506	GLUL	-	FALSE
chr1	26143727	A	T	0.00917	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	144909956	G	A	0.00310	NBPF20,PDE4DIP	+,-	FALSE
chr1	11734730	C	T	4.90909E-09	MAD2L2	-	FALSE
chr17	79476999	G	T	6.09622E-06	ACTG1	-	FALSE
chr1	68940885	G	A	0.00500	DEPDC1	-	FALSE	MIR	SINE,Alu
chr7	6202695	A	C	0.00013	CYTH3	-	FALSE
chr2	203744241	T	C	0.00511		.	FALSE	AluSx	SINE,Alu
chr2	176790393	C	T	0.00282	LNPK	-	FALSE	AluSp	SINE,Alu
chr3	14986104	T	C	0.00307	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr4	2940085	T	C	0.00801	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr19	53997266	A	G	0.00173	ZNF813	+	FALSE	L1M3	SINE,Alu
chr5	74072648	T	A	0.00036	NSA2	+	FALSE
chr3	93780109	G	C	8.09346E-05	DHFR2	-	FALSE
chr1	17730	C	A	0.00256	WASH7P	-	FALSE
chr1	24086788	C	T	0.00040	TCEB3	+	FALSE
chr6	150045919	T	C	0.00206	NUP43	-	TRUE	AluSq	SINE,Alu
chr2	11966317	T	C	0.00011	LPIN1	+	FALSE
chr19	11945631	A	G	0.00091	ZNF440	+	TRUE	AluSp	SINE,Alu
chr1	79109337	G	T	0.00790	IFI44L	+	FALSE	LTR26	SINE,Alu
chr1	36067677	T	C	0.00048	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	16892135	G	A	0.00221	NBPF1	-	FALSE
chr2	32535746	A	G	0.00085		.	FALSE	AluJb	SINE,Alu
chr1	28826150	A	G	0.00152	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr3	141667149	T	C	0.00273	TFDP2	-	TRUE	AluSx	SINE,Alu
chr3	20195395	C	T	3.65176E-06	KAT2B	+	FALSE
chr7	38765149	C	T	0.00785	VPS41	-	FALSE
chr1	153520954	C	T	0.00910	LOC101928034,S100A3	+,-	FALSE
chr3	40503555	A	T	0.00177	RPL14	+	FALSE
chr4	165998958	T	C	0.00021	TMEM192	-	TRUE	Alu	SINE,Alu
chr1	179045500	C	A	0.00043	FAM20B	+	FALSE
chr1	92862879	A	G	3.90108E-09		.	FALSE	AluJr	SINE,Alu
chr1	214529247	T	C	0.00233	PTPN14	-	TRUE
chr3	33187831	C	T	6.36740E-05	CRTAP	+	FALSE
chr1	44818525	T	C	0.00235	ERI3	-	FALSE
chr16	10623545	T	C	0.00142	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	92946618	A	G	0.00062	GFI1	-	FALSE
chr5	53842079	C	T	0.00067	SNX18	+	FALSE
chr1	31344628	T	A	0.00085	SDC3	-	FALSE
chr1	32697085	T	C	0.00366	EIF3I	+	FALSE	AluSp	SINE,Alu
chr1	1458255	T	G	0.00438	ATAD3A	+	FALSE
chr1	10518720	T	C	0.00530		.	FALSE	AluSx1	SINE,Alu
chr4	39549703	T	C	0.00150	UGDH-AS1,SMIM14	+,-	FALSE	AluSp	SINE,Alu
chr1	11783889	A	G	0.00746		.	FALSE	AluSq	SINE,Alu
chr4	177241194	C	T	6.44832E-08	SPCS3	+	FALSE
chr1	10517953	T	A	0.00535		.	FALSE
chr3	9935263	A	G	1.04104E-09	JAGN1	+	FALSE
chr1	15909850	C	G	0.00660	AGMAT	-	FALSE
chr12	53936878	G	T	0.00036	ATF7	-	FALSE
chr4	190883001	C	G	0.00297	FRG1	+	FALSE
chr1	26161108	A	C	7.55238E-06	AUNIP	-	FALSE	AluSc8	SINE,Alu
chr2	232574807	C	G	0.00134	PTMA	+	FALSE
chr1	10519912	T	C	0.00185		.	FALSE	AluJr	SINE,Alu
chr8	144662353	G	A	0.00951	EEF1D	-	FALSE
chr1	168218543	A	G	0.00547		.	FALSE	AluSz	SINE,Alu
chr8	133859871	T	A	0.00027	PHF20L1	+	FALSE
chr1	10520331	C	T	0.00065		.	FALSE	AluSx1	SINE,Alu
chr1	32687472	G	A	0.00877	TMEM234,EIF3I	+,-	FALSE
chr3	100083426	C	T	0.00908	TOMM70	-	FALSE	FAM	SINE,Alu
chr2	39009425	A	G	0.00607		.	FALSE	AluSx3	SINE,Alu
chr19	42375611	A	G	0.00426		.	FALSE	AluSx	SINE,Alu
chr1	6282298	T	C	2.81673E-05	ICMT	-	TRUE	AluSz	SINE,Alu
chr3	98518158	A	T	1.44910E-06	DCBLD2	-	FALSE
chr1	27202812	T	C	0.00388		.	FALSE	AluSq2	SINE,Alu
chr1	11783001	A	G	0.00012		.	FALSE	AluSx	SINE,Alu
chr5	74669972	C	T	0.00711	COL4A3BP	-	FALSE
chr7	29962665	C	T	0.00059	SCRN1	-	FALSE
chr1	17394775	G	A	0.00103	PADI2	-	FALSE
chr14	24661017	G	T	0.00771	TM9SF1	-	FALSE
chr1	149885583	A	G	0.00030	SV2A	-	FALSE
chr5	150647719	T	C	0.00112	GM2A	+	FALSE	AluSc	SINE,Alu
chr1	120839743	C	T	0.00647	FAM72B	+	FALSE
chr1	231398555	A	G	0.00401	GNPAT	+	FALSE
chr1	142619487	A	G	0.00511		.	FALSE
chr2	17897488	T	C	0.00430	SMC6	-	FALSE
chr4	248783	A	G	0.00901	ZNF876P	+	FALSE	L1MA3	SINE,Alu
chr12	76423035	A	G	0.00025	PHLDA1	-	FALSE
chr14	77581481	C	A	0.00997	CIPC	+	FALSE
chr1	148556743	G	A	0.00402		.	FALSE
chr3	12940377	G	T	0.00878	IQSEC1	-	FALSE
chr12	125511404	A	G	0.00201	THRIL	-	FALSE	AluSx1	SINE,Alu
chr16	4935146	C	T	0.00676	PPL	-	FALSE
chr6	150046734	T	C	0.00248	NUP43	-	FALSE
chr1	145512073	A	G	0.00505	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	187544234	C	T	0.00078	ITGAV	+	FALSE
chr1	16889414	T	C	0.00012	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	179042687	A	G	0.00163	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	160966299	T	C	1.46976E-05	F11R	-	TRUE	AluSg	SINE,Alu
chr1	212254067	G	A	0.00714	DTL	+	FALSE
chr7	129592510	G	T	0.00165	UBE2H	-	FALSE
chr9	132268942	A	G	0.00104	LINC00963	+	TRUE	AluYf1	SINE,Alu
chr2	98090925	T	C	0.00056	LOC100506076	-	FALSE	L1PREC2	SINE,Alu
chr1	990773	C	T	0.00486	AGRN	+	FALSE
chr2	47130850	A	G	0.00875	MCFD2	-	FALSE
chr5	175803244	A	G	0.00245		.	FALSE	AluSc8	SINE,Alu
chr3	40577755	A	G	0.00044	ZNF621	+	TRUE	AluSz	SINE,Alu
chr1	144930596	C	A	0.00103	NBPF20,PDE4DIP	+,-	FALSE
chr1	38155699	T	G	0.00734	C1orf109	-	FALSE	AluSx1	SINE,Alu
chr2	73460299	G	C	0.00180	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr2	99812464	A	G	0.00998	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	225974614	A	G	0.00209	SRP9	+	TRUE	AluJr	SINE,Alu
chr2	99812447	A	G	0.00587	MRPL30	+	TRUE	AluSx	SINE,Alu
chr4	2940243	T	A	0.00028	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chrX	152916233	C	A	0.00758	DUSP9	+	FALSE
chr4	39549693	T	C	0.00170	UGDH-AS1,SMIM14	+,-	FALSE	AluSp	SINE,Alu
chr7	2394991	C	T	9.93448E-08	EIF3B	+	FALSE
chr10	45499895	G	A	0.00255	ZNF22	+	FALSE
chrX	16781156	A	G	0.00061		.	FALSE	AluJo	SINE,Alu
chr6	41900765	A	G	0.00256	BYSL	+	FALSE
chr7	75958129	T	A	0.00162	YWHAG	-	FALSE
chr1	118071289	A	G	0.00023		.	FALSE
chr1	179042544	A	G	0.00722	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	161088583	T	G	0.00822	NIT1	+	FALSE
chr1	9330740	G	C	0.00077	H6PD	+	FALSE
chr6	25600772	A	G	0.00269	CARMIL1	+	FALSE
chr11	44641025	G	A	0.00850	CD82	+	FALSE
chr1	153720690	G	A	0.00786	INTS3	+	FALSE
chrX	123045405	A	G	0.00551	XIAP	+	TRUE	AluJo	SINE,Alu
chr15	23313171	A	G	0.00257	HERC2P2	-	FALSE
chr4	6675519	A	C	0.00064	LOC105374366	-	FALSE
chr1	16910172	G	A	0.00958	NBPF1	-	FALSE
chr1	46093161	C	T	0.00628	GPBP1L1	-	FALSE
chr3	63996227	G	T	0.00114	PSMD6-AS2,PSMD6	+,-	FALSE
chr7	6501832	A	C	0.00175	KDELR2	-	FALSE
chr5	40830064	T	C	0.00554		.	FALSE	AluSp	SINE,Alu
chr5	40832552	G	T	1.14652E-07	RPL37	-	FALSE
chr1	33071146	A	G	0.00899	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr2	242176182	G	A	2.43141E-09	HDLBP	-	FALSE
chr1	15899549	T	C	0.00960	AGMAT	-	TRUE	AluSq2	SINE,Alu
chr1	155851645	A	G	4.46102E-05	SYT11	+	TRUE	AluSq2	SINE,Alu
chr1	9160963	T	C	0.00130		.	FALSE	AluJb	SINE,Alu
chr1	9161365	T	C	4.68504E-05		.	FALSE	AluSx	SINE,Alu
chr17	42876730	T	C	0.00024	GJC1	-	TRUE	AluSz6	SINE,Alu
chr2	86249961	T	C	0.00262	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	109181304	C	A	0.00592	FAM102B	+	FALSE
chr1	52817376	T	C	0.00175	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr3	9934605	T	C	3.00360E-07	JAGN1	+	FALSE
chr5	154194457	A	C	0.00466	LARP1	+	FALSE
chr1	109419841	C	T	0.00057	GPSM2	+	FALSE
chr2	31491629	A	G	2.09863E-05		.	FALSE
chr2	85132777	T	C	1.13350E-06	TMSB10	+	FALSE
chr1	10520764	T	C	0.00542	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	6259025	C	T	0.00700	RPL22	-	FALSE
chr1	224575827	T	C	0.00214	WDR26	-	FALSE
chr1	27202959	T	C	0.00094		.	FALSE	AluSq2	SINE,Alu
chr5	177023119	T	A	0.00295	TMED9	+	FALSE
chr1	109855150	A	C	0.00062	SORT1	-	FALSE	A-rich	SINE,Alu
chr1	62627128	A	G	2.94675E-05	PATJ	+	TRUE	AluSx	SINE,Alu
chr1	94335330	A	T	0.00366	DNTTIP2	-	FALSE
chr2	86249930	T	C	0.00054	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	45280109	A	G	0.00251		.	FALSE	AluYk3	SINE,Alu
chr4	57326873	A	G	0.00342	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	932618	C	G	0.00569		.	FALSE
chr1	9161245	T	C	0.00071		.	FALSE	AluSx	SINE,Alu
chr7	128167988	T	C	0.00290		.	FALSE	AluSg	SINE,Alu
chr2	11323079	T	A	0.00586	ROCK2	-	FALSE	(TA)n	SINE,Alu
chr1	113213009	A	T	0.00556	CAPZA1	+	FALSE
chr1	26188238	G	A	0.00148	PAQR7	-	FALSE	AluSp	SINE,Alu
chr5	177577138	T	C	0.00163	NHP2	-	FALSE
chr1	33149373	A	G	0.00918	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	179326315	A	G	0.00187	SOAT1	+	TRUE
chr1	16932144	A	C	1.90883E-05	NBPF1	-	FALSE
chr2	37327702	T	C	0.00519		.	FALSE
chr2	85824711	G	A	0.00198	RNF181	+	FALSE
chr1	43394612	T	C	0.00154	SLC2A1	-	FALSE
chr1	53359745	A	G	0.00129	ZYG11A	+	TRUE	AluSx4	SINE,Alu
chr1	11783902	A	G	0.00336		.	FALSE	AluSq	SINE,Alu
chr1	53716416	G	A	0.00967	LRP8	-	FALSE
chr5	175811094	C	T	0.00700	NOP16	-	FALSE
chr1	6283348	T	C	0.00082	ICMT	-	TRUE	AluSx3	SINE,Alu
chr7	157129834	C	G	1.26796E-05	DNAJB6	+	FALSE
chr1	145100772	A	G	0.00945	NBPF20,SEC22B	+	TRUE	AluSg4	SINE,Alu
chr1	65298626	T	A	0.00580	RAVER2	+	FALSE	X12_DNA	SINE,Alu
chr3	86991598	G	T	0.00179	VGLL3	-	FALSE
chr1	16932428	C	G	0.00197	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr7	20178567	T	C	1.15326E-05	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr7	38764332	T	C	0.00209	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	45242978	A	G	0.00604	RPS8	+	TRUE	AluSz	SINE,Alu
chr1	53291420	A	G	0.00213	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	37949224	C	T	7.78396E-10	ZC3H12A	+	FALSE
chr8	27661036	C	A	0.00339	ESCO2	+	FALSE	A-rich	SINE,Alu
chr6	24719384	A	C	0.00215	C6orf62	-	FALSE	(A)n	SINE,Alu
chr2	202083872	A	G	0.00022	CASP10	+	TRUE	AluSz	SINE,Alu
chr5	64023977	C	T	0.00340	SREK1IP1	-	FALSE	(TTTTTTT)n	SINE,Alu
chr2	67631831	G	A	0.00423	ETAA1	+	FALSE
chr2	187544223	T	G	0.00254	ITGAV	+	FALSE
chr1	145283718	G	A	0.00897	NBPF20,NOTCH2NL	+	FALSE
chr5	52389811	T	G	0.00561	ITGA2	+	FALSE
chr1	46032311	A	G	0.00043	AKR1A1	+	FALSE
chr1	10043053	A	G	0.00318	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr2	99812988	A	G	0.00793	MRPL30	+	TRUE	AluJb	SINE,Alu
chr5	53841240	A	G	0.00416	SNX18	+	FALSE
chr3	40578843	A	G	0.00749	ZNF621	+	TRUE	AluJr	SINE,Alu
chr16	19715543	T	C	0.00879		.	FALSE	AluSg	SINE,Alu
chr1	16892275	C	T	0.00087	NBPF1	-	FALSE
chr1	220231997	T	C	0.00244	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr2	217366194	C	A	0.00359		.	FALSE
chr14	76671382	A	G	0.00777	GPATCH2L	+	TRUE	AluJr4	SINE,Alu
chr1	46033514	G	A	0.00073	AKR1A1	+	FALSE	AluYk3	SINE,Alu
chr1	67518534	C	T	0.00682	SLC35D1	-	FALSE
chr1	112266790	C	T	0.00892	FAM212B	-	FALSE
chr1	148251952	C	A	0.00905	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	1549354	G	A	0.00132		.	FALSE	HAL1	SINE,Alu
chr1	10521254	T	C	0.00023	DFFA	-	TRUE	AluY	SINE,Alu
chr7	44917406	T	C	0.00021	PURB	-	TRUE	AluSz	SINE,Alu
chr1	28824041	T	A	0.00627	PHACTR4	+	FALSE	AluSx	SINE,Alu
chr1	10517653	T	C	0.00228		.	FALSE	AluSx1	SINE,Alu
chr2	65539437	C	T	0.00076	SPRED2	-	FALSE
chr1	120611964	G	C	0.00211	NOTCH2	-	FALSE
chr1	109239335	G	T	0.00011	PRPF38B	+	FALSE
chr1	145509569	A	G	0.00777	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr3	10065426	C	T	0.00776	CIDECP	-	FALSE
chr5	130540368	A	C	0.00420	LYRM7	+	FALSE	Tigger4a	SINE,Alu
chr2	106510202	C	T	0.00854	NCK2	+	FALSE
chr1	179832748	G	C	7.50400E-12	TOR1AIP2	-	FALSE	FLAM_C	SINE,Alu
chr1	16945027	T	C	0.00819	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr2	32533707	A	G	0.00395		.	FALSE	AluSp	SINE,Alu
chr1	117645998	A	G	0.00057		.	FALSE
chr2	176791183	T	C	0.00252	LNPK	-	TRUE	MSTD	SINE,Alu
chr10	62554474	T	G	6.65730E-05	CDK1	+	FALSE
chr1	179070646	T	C	0.00283	ABL2	-	TRUE	AluSz	SINE,Alu
chr5	178986978	C	G	0.00341	RUFY1	+	FALSE
chr1	161160460	T	A	0.00298	ADAMTS4	-	FALSE	(CA)n	SINE,Alu
chr5	178293266	G	A	0.00924	ZNF354B	+	FALSE
chr3	179117241	T	C	0.00133	GNB4	-	TRUE	AluSz	SINE,Alu
chr2	162849312	G	C	0.00840	DPP4	-	FALSE
chr3	149679162	T	A	0.00235	RNF13	+	FALSE
chr15	93198678	T	C	0.00064	FAM174B	-	FALSE	(GCCGCT)n	SINE,Alu
chr2	102484490	G	T	0.00635	MAP4K4	+	FALSE
chr7	100957851	T	C	0.00028	LOC101927746,IFT22	+,-	FALSE	MADE1	SINE,Alu
chr1	46774783	A	G	1.06423E-10	UQCRH	+	FALSE	(AGG)n	SINE,Alu
chr1	24151858	C	T	0.00104	HMGCL	-	FALSE
chr7	65619243	A	G	9.04168E-05	CRCP	+	TRUE	AluSz6	SINE,Alu
chr1	16933638	G	A	4.07227E-05	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	87811249	T	A	0.00653	LMO4	+	FALSE
chr3	44790759	T	C	0.00744	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	10520725	T	C	0.00795	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	145291217	C	T	0.00075	NBPF20	+	FALSE
chr6	42855256	A	G	0.00572	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr3	15114493	T	C	2.42944E-10	RBSN	-	TRUE	AluY	SINE,Alu
chr12	98942885	A	G	1.31269E-05	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	15988702	T	C	0.00362		.	FALSE
chr2	230629138	C	T	0.00958	TRIP12	-	FALSE
chr1	19545144	G	T	0.00071	LOC101927895,EMC1	+,-	FALSE
chr1	33149373	A	G	0.00239	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr4	103715820	A	C	0.00652	LOC102723704,UBE2D3	+,-	FALSE	(A)n	SINE,Alu
chr10	104661031	A	G	0.00265	BORCS7-ASMT,AS3MT	+	TRUE	AluY	SINE,Alu
chr7	17384354	A	G	0.00908	AHR	+	TRUE	AluSx	SINE,Alu
chr1	36316571	A	C	0.00893	AGO4	+	FALSE
chr1	43391824	A	T	0.00552	SLC2A1	-	FALSE
chr4	3770069	G	C	0.00018	ADRA2C	+	FALSE
chr1	67874697	T	C	0.00642	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	100550370	T	A	0.00743	SASS6	-	FALSE
chr2	206986978	T	C	0.00159		.	FALSE	AluJr	SINE,Alu
chr1	24296849	T	C	0.00125		.	FALSE
chr17	79674375	C	T	0.00129	MRPL12	+	FALSE
chr19	19792288	A	G	0.00379	ZNF101	+	TRUE	AluJb	SINE,Alu
chr3	15113810	T	C	0.00201	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	65898263	A	G	0.00767	LEPR,LEPROT	+	FALSE	MIRc	SINE,Alu
chr6	79595097	A	G	0.00712	IRAK1BP1	+	FALSE
chr3	52289298	G	T	0.00059	WDR82	-	FALSE
chr2	128601490	T	C	0.00013		.	FALSE	AluJr	SINE,Alu
chr1	25570561	T	A	0.00425	RSRP1	-	FALSE	Alu	SINE,Alu
chr2	170495929	T	A	0.00625		.	FALSE
chr1	118502771	A	G	0.00466	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr1	44088556	C	A	0.00260	PTPRF	+	FALSE	A-rich	SINE,Alu
chr1	16918502	A	G	0.00098	NBPF1	-	FALSE
chr1	214529320	T	G	0.00365	PTPN14	-	FALSE	AluJb	SINE,Alu
chr1	1345006	A	G	1.26297E-06		.	FALSE	AluSg	SINE,Alu
chr1	53366673	A	G	0.00243	ECHDC2	-	FALSE	AluJb	SINE,Alu
chr6	42048297	A	G	0.00307	TAF8	+	TRUE	AluSq2	SINE,Alu
chr1	15993714	T	A	0.00066		.	FALSE
chr6	42855967	A	G	0.00151	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr8	12283440	A	G	0.00041	FAM86B2	-	FALSE
chr1	228881129	A	G	0.00199	RHOU	+	FALSE
chr3	112320485	T	C	0.00107	LINC01279	-	TRUE	AluJb	SINE,Alu
chr1	23636875	T	A	0.00686	HNRNPR	-	FALSE
chrX	123046306	A	G	0.00016	XIAP	+	TRUE	AluJb	SINE,Alu
chr1	36068052	G	T	1.43241E-12	PSMB2	-	FALSE	L1ME4b	SINE,Alu
chr10	75008847	T	C	0.00349	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr5	44819912	A	G	0.00176		.	FALSE	AluSz	SINE,Alu
chr1	246829873	G	A	0.00342	CNST	+	FALSE
chr1	24798089	G	A	0.00815	NIPAL3	+	FALSE
chr1	93617403	T	G	0.00053	TMED5	-	FALSE
chr3	183209036	T	C	1.78981E-05	KLHL6	-	TRUE	AluSq	SINE,Alu
chr1	206566195	C	T	0.00462	SRGAP2	+	FALSE
chr1	179843725	T	C	0.00028	TOR1AIP2	-	TRUE	AluJb	SINE,Alu
chr1	52306079	T	A	0.00033	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr1	21100779	T	C	0.00086	HP1BP3	-	TRUE	AluJr	SINE,Alu
chr7	128142691	A	G	0.00017	METTL2B	+	TRUE	AluSx1	SINE,Alu
chr1	38326728	T	C	0.00399	INPP5B	-	TRUE	AluJr	SINE,Alu
chr16	81064533	A	G	0.00686	CENPN	+	TRUE	AluSg	SINE,Alu
chr3	156259340	T	C	0.00070	SSR3	-	TRUE	AluSq2	SINE,Alu
chr3	122283287	T	C	8.96368E-06	DTX3L,PARP9	+,-	FALSE
chr7	6501820	A	T	0.00288	KDELR2	-	FALSE
chr3	52084404	A	T	0.00032	DUSP7	-	FALSE	(A)n	SINE,Alu
chr2	217366444	A	G	2.40359E-05		.	FALSE
chr3	32496328	C	A	0.00013	CMTM7	+	FALSE
chr10	75008955	T	C	0.00058	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	33145959	T	G	0.00755	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chr1	8938276	T	A	0.00178	ENO1	-	FALSE
chr1	2282776	G	C	0.00011	MORN1,LOC100129534	-	FALSE
chr1	1419823	A	G	0.00816	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr3	24019989	C	T	0.00339	NR1D2	+	FALSE
chr1	179042687	A	G	0.00782	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	220231959	T	C	1.45735E-05	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr19	18476232	A	G	0.00189	PGPEP1	+	TRUE	AluJb	SINE,Alu
chr15	39879717	G	A	0.00162	THBS1	+	FALSE
chr1	19586437	A	G	0.00056	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	217366919	A	G	0.00480		.	FALSE	AluSz6	SINE,Alu
chr1	15904318	C	T	9.04121E-06	AGMAT	-	FALSE
chr1	3416449	C	A	0.00748	MEGF6	-	FALSE
chr1	145283980	C	T	0.00113	NBPF20,NOTCH2NL	+	FALSE
chr1	36534830	A	G	0.00470		.	FALSE	AluJo	SINE,Alu
chr5	140594470	G	A	0.00041	PCDHB13	+	FALSE
chr5	141690772	C	T	0.00632	SPRY4	-	FALSE
chr15	65442523	G	A	0.00068	CLPX	-	FALSE	AluSg4	SINE,Alu
chr1	168214098	T	G	0.00134		.	FALSE
chr1	28825418	A	G	0.00961	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr2	232576431	T	C	0.00593	PTMA	+	FALSE
chr1	145513031	A	G	0.00014	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr2	218696215	A	G	0.00915	TNS1	-	FALSE
chr7	29961659	C	G	7.23387E-07	SCRN1	-	FALSE
chr2	228421461	G	C	0.00069	AGFG1	+	FALSE
chr3	69154081	G	A	0.00999	ARL6IP5	+	FALSE
chr11	63394018	C	A	0.00103	ATL3	-	FALSE
chr11	110128567	A	T	0.00634	RDX	-	FALSE
chr1	19586519	A	G	0.00015	MRTO4	+	TRUE	AluSz	SINE,Alu
chr5	43377390	T	C	0.00062	CCL28	-	TRUE	AluSz	SINE,Alu
chr4	159176109	C	A	0.00042	TMEM144	+	FALSE	MIR	SINE,Alu
chr1	118166877	C	T	0.00980	FAM46C	+	FALSE
chr1	47142539	T	A	0.00066	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr3	33907945	A	G	3.34896E-07	PDCD6IP	+	FALSE
chr2	39210398	A	T	0.00180	SOS1	-	FALSE
chr1	36068227	T	C	0.00398	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	36068275	T	C	0.00625	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	33909611	C	T	0.00598	PDCD6IP	+	FALSE
chr14	68144079	G	T	0.00974	RDH11	-	FALSE
chr1	10438014	A	C	0.00046	KIF1B	+	FALSE
chr2	20401859	A	T	0.00930	SDC1	-	FALSE	(A)n	SINE,Alu
chr1	152186699	T	A	0.00891	HRNR	-	FALSE
chr1	20945055	C	T	0.00269	CDA	+	FALSE
chr1	78414308	T	C	0.00024	FUBP1	-	FALSE
chr5	139931631	G	C	0.00138	SRA1	-	FALSE
chr10	75008876	T	C	0.00255	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	44415424	A	G	0.00213	IPO13	+	FALSE
chr6	33384325	G	T	0.00456		.	FALSE
chr1	6282324	T	C	0.00142	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	100489297	G	C	0.00669	SLC35A3	+	FALSE	AluSc	SINE,Alu
chr3	10193358	A	G	1.11864E-10	VHL	+	TRUE	L1ME4a	SINE,Alu
chr2	24225013	A	G	0.00103		.	FALSE	AluSx	SINE,Alu
chr2	11728089	C	T	0.00352	GREB1	+	FALSE	AluSz	SINE,Alu
chr1	148556753	G	A	0.00472		.	FALSE
chr2	101622888	T	A	0.00210	RPL31	+	FALSE
chr1	9160982	T	C	0.00695		.	FALSE	AluJb	SINE,Alu
chr1	22200473	C	T	0.00039	HSPG2	-	FALSE
chr17	8378694	A	C	0.00735	MYH10	-	FALSE
chr3	172117458	A	C	0.00011	FNDC3B	+	FALSE
chr1	19934839	A	G	0.00605	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	144607387	G	C	0.00016	NBPF20	+	FALSE
chr14	75202288	C	T	0.00706	FCF1	+	FALSE	AluSc	SINE,Alu

RBP	TRIM25
Knock-Method	siRNA
RBP Family	Non-canonical_RBP
Biosample Name	MCF7
Tissue Type	Breast
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE79586
Platform	GPL167891
Pubmed ID	28813674

TRIM25 - Target Gene Network