RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr2	86252025	T	C	3.86923E-05	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	19934758	C	G	1.75422E-05	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr17	4929863	A	G	0.00597	KIF1C	+	TRUE	AluJb	SINE,Alu
chr2	37330611	T	C	0.00835		.	FALSE	AluSq2	SINE,Alu
chr1	145511991	A	G	0.00044	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	14986471	T	C	3.70393E-05	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	113511341	A	G	0.00283		.	FALSE	AluY	SINE,Alu
chr1	197477932	C	T	0.00488	DENND1B	-	FALSE
chr13	20246634	T	G	0.00071	MPHOSPH8	+	FALSE
chr1	19542433	T	C	0.00076	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	88205579	G	T	2.47620E-05	C3orf38	+	FALSE
chr1	53291408	A	G	0.00931	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	178447798	T	C	2.92578E-05	RASAL2	+	FALSE
chr1	117529752	C	A	0.00024	PTGFRN	+	FALSE
chr1	10044272	A	G	0.00737	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr18	2544702	G	A	0.00522	METTL4	-	FALSE
chr21	34729969	A	G	0.00077	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr2	155555207	A	C	0.00073	KCNJ3	+	FALSE
chr1	53292875	G	T	8.43181E-07	ZYG11B	+	FALSE
chr3	40577761	A	G	0.00701	ZNF621	+	TRUE	AluSz	SINE,Alu
chr1	16933583	T	C	0.00050	NBPF1	-	FALSE	GA-rich	SINE,Alu
chrX	77084042	T	C	0.00703	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	1469782	G	C	0.00544	ATAD3A	+	FALSE
chr6	31110789	T	C	0.00798		.	FALSE
chr1	230416038	G	A	0.00626	GALNT2	+	FALSE
chr5	154194457	A	C	0.00466	LARP1	+	FALSE
chr1	38327542	T	C	0.00068	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr3	33907945	A	G	3.34896E-07	PDCD6IP	+	FALSE
chr1	16890607	G	A	0.00869	NBPF1	-	FALSE
chr8	26435509	T	C	0.00121	DPYSL2	+	FALSE	(TC)n	SINE,Alu
chr2	233446265	T	C	0.00177	EIF4E2	+	FALSE
chr1	87573331	T	C	0.00699	HS2ST1	+	FALSE	(AT)n	SINE,Alu
chr1	16933135	G	T	2.86961E-06	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr2	47085954	C	T	0.00805	LINC01119	+	FALSE
chr2	204300093	A	C	0.00105	RAPH1	-	FALSE	FLAM_C	SINE,Alu
chr6	27860480	G	A	0.00908	HIST1H2AM	-	FALSE
chr1	10520296	T	C	0.00108		.	FALSE	AluSx	SINE,Alu
chr1	45975584	T	C	0.00327	MMACHC	+	FALSE	AluSx4	SINE,Alu
chr7	102004748	T	C	0.00050	LOC100289561,LOC100630923	+	FALSE
chr1	155161704	G	C	0.00034	MUC1	-	FALSE
chr2	38975954	A	C	0.00381	SRSF7	-	FALSE
chr7	6501833	A	T	0.00937	KDELR2	-	FALSE
chr1	1597423	C	T	1.10134E-13	CDK11B,SLC35E2B	-	FALSE
chr1	53291434	A	G	0.00318	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	19543353	T	C	0.00077	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	179813613	T	C	0.00595	TOR1AIP2	-	FALSE
chr2	128064446	G	T	0.00652	MAP3K2	-	FALSE	(GT)n	SINE,Alu
chr1	145303971	A	G	0.00060	NBPF20,NBPF10	+	FALSE
chr17	72784932	G	A	0.00444	TMEM104	+	FALSE
chr3	179042832	A	G	0.00308	ZNF639	+	TRUE	AluSp	SINE,Alu
chr1	23636875	T	A	0.00686	HNRNPR	-	FALSE
chr1	24796838	A	G	0.00484	NIPAL3	+	FALSE	MER5A	SINE,Alu
chr4	113108680	A	G	0.00109	C4orf32	+	FALSE
chr2	203744241	T	C	0.00511		.	FALSE	AluSx	SINE,Alu
chrX	77083617	T	C	3.46806E-05	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr14	72041443	C	T	0.00842	SIPA1L1	+	FALSE
chr2	27293352	A	T	0.00314	AGBL5,OST4	+,-	FALSE
chr2	37327665	T	C	2.45403E-06		.	FALSE
chr1	67874689	T	C	0.00146	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr17	5288083	T	A	0.00232	RABEP1	+	FALSE
chr1	16935130	C	T	0.00155	NBPF1	-	FALSE
chr4	10443060	T	G	0.00167	ZNF518B	-	FALSE
chr5	140482871	T	G	0.00650	PCDHB3	+	FALSE
chr1	9163400	T	C	0.00726		.	FALSE	AluSp	SINE,Alu
chr1	156565045	C	A	0.00995	GPATCH4	-	FALSE
chr2	174773510	T	A	0.00775	SP3	-	FALSE	A-rich	SINE,Alu
chr1	20975992	T	C	2.78350E-06	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	19542463	T	C	0.00447	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	10519048	T	C	0.00089		.	FALSE	AluSx3	SINE,Alu
chr1	53288897	A	G	0.00299	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	23636275	G	T	0.00258	HNRNPR	-	FALSE
chr1	10520117	T	C	0.00188		.	FALSE	AluSx	SINE,Alu
chr3	46007825	T	C	4.58354E-06	FYCO1	-	FALSE
chr1	116943511	T	C	0.00236	ATP1A1,ATP1A1-AS1	+,-	FALSE
chr12	9464350	G	C	0.00209	LOC642846	+	FALSE
chr4	95588274	G	A	0.00095	PDLIM5	+	FALSE
chr19	53155625	T	C	0.00074	ZNF83	-	TRUE	AluSg	SINE,Alu
chr1	247319705	T	G	6.58458E-05	ZNF124	-	FALSE
chr4	152583924	A	T	0.00284	FAM160A1	+	FALSE
chr1	31905887	A	C	0.00221	SERINC2	+	FALSE
chr1	16717888	G	A	0.00118	SZRD1	+	FALSE
chr9	136209402	A	G	0.00431	MED22	-	FALSE	(CAGGG)n	SINE,Alu
chr14	31916770	T	C	0.00153	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr2	234775941	A	G	0.00161	MSL3P1	-	FALSE
chr3	16301791	G	A	4.37274E-05	DPH3	-	FALSE
chr1	143189473	C	A	0.00626	LOC102723769	-	FALSE
chr9	136209398	G	A	0.00150	MED22	-	FALSE
chr1	36032230	C	A	0.00297	NCDN	+	FALSE
chr3	156258319	T	C	0.00909	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	36068369	T	C	5.31121E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	6684050	G	A	2.21294E-05	PHF13	+	FALSE
chr20	25428384	A	G	0.00195	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	184761350	T	C	0.00219	FAM129A	-	TRUE	AluJo	SINE,Alu
chr6	3022544	T	C	7.02821E-06	HTATSF1P2	-	TRUE	AluJr	SINE,Alu
chr1	145322843	C	T	0.00271	NBPF20,NBPF10	+	FALSE
chr4	139086857	G	A	0.00809	SLC7A11-AS1,SLC7A11	+,-	FALSE
chr1	86852621	A	G	0.00930	ODF2L	-	FALSE
chr1	16891365	G	A	0.00475	NBPF1	-	FALSE
chr1	16909129	T	C	0.00131	NBPF1	-	FALSE
chr1	93828011	G	T	0.00464	DR1	+	FALSE
chrX	77083981	T	C	0.00647	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	109884775	T	G	0.00026	SORT1	-	FALSE
chr7	86816663	A	G	0.00103	DMTF1	+	TRUE	AluJr	SINE,Alu
chr1	153917621	G	C	0.00020	DENND4B	-	FALSE
chr17	5288081	C	T	0.00518	RABEP1	+	FALSE
chr2	174086940	C	A	0.00047	ZAK,MLK7-AS1	+,-	FALSE	AluJo	SINE,Alu
chr9	132268440	A	G	3.40625E-05	LINC00963	+	TRUE	AluJb	SINE,Alu
chr1	1594977	T	C	0.00075	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	160990906	G	A	0.00270	F11R	-	FALSE
chr1	47746678	G	C	0.00328	STIL	-	FALSE
chr2	20401856	T	G	0.00263	SDC1	-	FALSE
chr1	10520076	T	C	0.00075		.	FALSE	AluSx	SINE,Alu
chr2	37328034	T	C	8.99638E-05		.	FALSE
chr1	36787880	C	T	0.00023	EVA1B	-	FALSE
chr13	99056476	A	T	0.00535	FARP1	+	FALSE
chr4	10443059	A	T	0.00187	ZNF518B	-	FALSE
chr1	10518756	T	C	0.00937		.	FALSE	AluSx1	SINE,Alu
chr17	17425631	C	T	0.00036	PEMT	-	FALSE
chr8	124262076	G	T	0.00115	ZHX1-C8orf76,ZHX1	-	FALSE
chr3	160219095	G	A	0.00620	KPNA4	-	FALSE	A-rich	SINE,Alu
chr1	3371371	C	G	0.00844	ARHGEF16	+	FALSE
chr1	53708528	T	C	0.00057	LRP8	-	FALSE	(TA)n	SINE,Alu
chr1	180082720	G	A	0.00577	CEP350	+	FALSE
chr1	10093457	C	T	0.00777	UBE4B	+	FALSE
chr2	158636910	G	A	0.00160	ACVR1	-	FALSE
chr1	19585493	A	G	3.52757E-05	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr16	58054477	T	C	0.00180	USB1	+	FALSE
chr1	169101270	T	G	0.00036	ATP1B1	+	FALSE	(T)n	SINE,Alu
chr15	77403107	C	A	3.43068E-05	PEAK1	-	FALSE
chr6	138413269	A	G	0.00743	PERP	-	FALSE
chr2	37431639	T	C	0.00160	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr1	145311900	C	T	0.00011	NBPF20,NBPF10	+	FALSE
chr1	6282295	T	C	0.00060	ICMT	-	TRUE	AluSz	SINE,Alu
chr4	3770069	G	C	0.00018	ADRA2C	+	FALSE
chr7	29960462	G	A	5.89775E-06	SCRN1	-	FALSE
chr1	33087433	C	T	0.00687	ZBTB8OS	-	FALSE
chr2	191556844	T	A	0.00261	NAB1	+	FALSE
chr1	46830110	A	G	0.00283	NSUN4	+	TRUE	AluSx1	SINE,Alu
chr17	49041732	T	C	0.00135	SPAG9	-	TRUE	AluSx	SINE,Alu
chr1	9161218	T	C	0.00641		.	FALSE	AluSx	SINE,Alu
chr4	41956313	A	G	0.00710	TMEM33	+	FALSE
chr2	178086785	C	A	0.00808	HNRNPA3	+	FALSE
chr2	234438139	A	G	0.00220	USP40	-	FALSE
chr1	32669918	G	A	0.00639	CCDC28B	+	FALSE
chr11	125526125	A	G	0.00374	CHEK1	+	TRUE	FRAM	SINE,Alu
chr1	28662199	A	G	0.00011	MED18	+	TRUE	AluSq2	SINE,Alu
chr7	65618249	A	G	0.00785	CRCP	+	TRUE	AluSp	SINE,Alu
chr3	100043289	C	T	0.00049	TBC1D23	+	FALSE
chr6	114182783	A	G	0.00442	MARCKS	+	FALSE
chr14	53243438	T	C	7.89901E-12	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr1	19586458	A	G	0.00053	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	32535692	A	G	0.00236		.	FALSE	AluJb	SINE,Alu
chr1	205581853	C	T	0.00750	ELK4	-	FALSE
chr16	10623531	T	C	1.32618E-09	EMP2	-	TRUE	AluSp	SINE,Alu
chr5	40832555	A	T	0.00347	RPL37	-	FALSE
chr3	32997308	A	G	0.00082		.	FALSE	AluY	SINE,Alu
chr3	194789330	G	T	0.00699	XXYLT1	-	FALSE	AluJr	SINE,Alu
chr1	28608338	A	G	0.00341	SESN2	+	FALSE
chr2	69688852	T	C	0.00414	AAK1	-	TRUE	AluSq2	SINE,Alu
chr1	11084103	T	A	0.00044	TARDBP	+	FALSE
chr3	191115082	G	C	0.00037	CCDC50	+	FALSE
chr2	239360542	C	A	0.00989	ASB1	+	FALSE
chr4	2940164	T	C	2.22609E-06	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	10364612	A	C	0.00860	KIF1B	+	FALSE
chr4	77996969	T	G	0.00971	CCNI	-	FALSE
chr3	142776250	A	C	0.00926	U2SURP	+	FALSE
chr2	8823954	G	A	7.64310E-06	ID2	+	FALSE
chr3	196079390	T	C	2.00948E-06		.	FALSE	AluSx	SINE,Alu
chr1	36534934	A	G	0.00464		.	FALSE	AluJo	SINE,Alu
chr1	36614708	C	T	0.00201	TRAPPC3	-	FALSE
chr8	145159718	G	C	0.00409	MAF1	+	FALSE
chr3	99517483	C	T	0.00070	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr1	20977380	T	C	0.00695	PINK1,PINK1-AS	+,-	FALSE
chr5	180665123	G	A	0.00259	RACK1	-	FALSE
chr6	111591610	A	G	0.00105		.	FALSE	FLAM_A	SINE,Alu
chr2	105883650	T	G	0.00086	TGFBRAP1	-	FALSE
chr1	145512074	A	G	0.00084	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	160175191	A	C	0.00509	LOC729867,PEA15	+,-	FALSE	(GGC)n	SINE,Alu
chr1	162497663	G	A	0.00335	UHMK1	+	FALSE
chr3	10192826	A	G	0.00037	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	987670	T	G	0.00148	AGRN	+	FALSE
chr1	33071146	A	G	0.00899	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	53289892	A	G	0.00079	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr17	41133087	A	G	0.00141	RUNDC1	+	FALSE
chr4	2516790	G	T	7.50309E-05	RNF4	+	FALSE
chr4	17804847	T	C	0.00306	DCAF16	-	TRUE	AluSx	SINE,Alu
chr22	41252612	G	A	0.00561	ST13	-	FALSE
chr7	44918728	T	C	0.00192	PURB	-	TRUE	AluSg	SINE,Alu
chr2	37429627	A	G	0.00027	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr1	16933753	G	A	0.00740	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr7	63808867	C	A	0.00556	ZNF736	+	FALSE
chr1	19542456	T	C	0.00193	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	131129926	G	T	0.00034	PTPN18	+	FALSE
chr17	57281098	A	G	0.00181	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	110136458	A	G	0.00136	GNAI3	+	FALSE
chr2	174090630	C	A	0.00025	ZAK,MLK7-AS1	+,-	FALSE
chr14	63841401	G	C	0.00014	PPP2R5E	-	FALSE
chr7	7918285	G	A	0.00255	UMAD1	+	FALSE
chr1	1593023	G	C	2.84325E-05	CDK11B,SLC35E2B	-	FALSE
chr1	224573601	C	T	0.00587	WDR26	-	FALSE
chr7	44841931	A	G	0.00054	PPIA	+	TRUE	AluSx	SINE,Alu
chr15	33063527	C	T	0.00183	FMN1	-	FALSE	AluYk3	SINE,Alu
chr6	100005419	A	G	2.18273E-06	CCNC	-	FALSE	AluSg	SINE,Alu
chrX	77083828	T	C	1.52468E-05	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	114306372	A	G	0.00443	RSBN1	-	FALSE
chr1	53288894	A	G	0.00066	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	146650916	C	T	0.00025	PDIA3P1	+	FALSE
chr3	86991598	G	T	0.00179	VGLL3	-	FALSE
chr5	56177846	G	C	0.00952	MAP3K1	+	FALSE
chr7	99917927	T	C	0.00320	SPDYE3	+	FALSE	AluJb	SINE,Alu
chr10	28971535	T	A	0.00169	BAMBI	+	FALSE
chr1	19984346	A	G	0.00071	MINOS1-NBL1,NBL1	+	FALSE
chr3	37407769	A	T	0.00406	GOLGA4	+	FALSE
chr1	25889176	C	T	3.50303E-06	LDLRAP1	+	FALSE
chr14	103372465	C	A	0.00600	TRAF3	+	FALSE	(AC)n	SINE,Alu
chr1	28825465	A	G	0.00496	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr2	39009355	A	G	0.00079		.	FALSE	AluSx3	SINE,Alu
chr2	99812429	A	G	0.00504	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	36522615	A	G	0.00658		.	FALSE	AluSc	SINE,Alu
chr1	212273639	C	T	0.00710	DTL	+	FALSE
chr9	91724517	C	T	0.00289	SHC3	-	FALSE
chr20	35869801	G	A	0.00150	RPN2	+	FALSE
chr1	10519932	T	C	0.00710		.	FALSE	AluJr	SINE,Alu
chr2	3592638	T	C	0.00164	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr1	10043840	G	T	6.08980E-05	NMNAT1	+	FALSE
chr1	204525713	A	G	0.00501	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	26608021	T	A	0.00069		.	FALSE
chr1	109192040	T	C	6.39517E-05	HENMT1	-	TRUE	AluJr	SINE,Alu
chr1	110049203	G	C	0.00530		.	FALSE
chr1	115299508	A	T	0.00070	CSDE1	-	FALSE
chr1	115259543	C	T	0.00492	CSDE1	-	FALSE
chr1	33961147	T	G	0.00236	ZSCAN20	+	FALSE
chr3	39453610	C	T	0.00025	RPSA	+	FALSE
chr9	70648427	G	A	0.00096		.	FALSE	TAR1	SINE,Alu
chr3	184039666	A	G	0.00010	EIF4G1	+	FALSE
chr9	85861561	C	T	0.00287	FRMD3	-	FALSE	(TC)n	SINE,Alu
chr1	145512073	A	G	0.00056	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr5	125961623	A	G	6.78430E-09	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	46075777	A	G	0.00268	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	145273302	A	G	0.00656	NBPF20,NOTCH2NL	+	FALSE
chr1	788840	T	C	0.00299	LINC01128	+	FALSE
chr9	19373160	A	G	0.00404	DENND4C	+	FALSE	MADE1	SINE,Alu
chr3	98299365	T	G	3.92075E-11	CPOX	-	FALSE
chr4	56294560	A	G	0.00965	CLOCK	-	FALSE
chr8	95805070	A	G	0.00721	DPY19L4	+	TRUE	AluYf1	SINE,Alu
chr11	65404877	G	A	0.00106	PCNX3	+	FALSE
chr6	33281842	G	T	0.00514		.	FALSE
chr1	51822219	G	A	0.00283	EPS15	-	FALSE
chr8	41401497	A	G	0.00051	LOC102723729,GINS4	+,-	FALSE	AluSq2	SINE,Alu
chr1	28661656	A	G	0.00106	MED18	+	TRUE	AluSg	SINE,Alu
chr5	93018884	A	C	0.00538	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr1	179044181	A	G	0.00660	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	26755136	A	G	0.00279	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr2	128061053	A	G	0.00184	MAP3K2	-	FALSE
chr20	57603729	A	T	0.00444		.	FALSE
chr1	153533586	T	C	0.00358	S100A2	-	FALSE	Charlie18a	SINE,Alu
chr17	38974612	T	C	0.00963	KRT10	-	FALSE
chr1	204521616	A	G	0.00455	MDM4	+	TRUE	AluSg	SINE,Alu
chr3	57913810	G	A	0.00477	SLMAP	+	FALSE
chr2	24224134	A	G	9.70565E-06		.	FALSE	AluSp	SINE,Alu
chr9	89627066	A	G	0.00588	LOC440173	-	FALSE
chr3	32524229	G	T	0.00359	CMTM6	-	FALSE
chr11	94863488	C	T	0.00615	ENDOD1	+	FALSE
chr8	10689212	C	T	3.39921E-05	PINX1	-	FALSE
chr3	15114385	T	C	0.00146	RBSN	-	TRUE	AluY	SINE,Alu
chr5	175811091	G	A	0.00592	NOP16	-	FALSE
chr1	179044110	A	G	0.00931	FAM20B	+	TRUE	AluSx	SINE,Alu
chr5	115166350	T	C	0.00148	ATG12	-	TRUE	AluJr	SINE,Alu
chr9	115447531	T	C	0.00164	INIP	-	TRUE	AluJb	SINE,Alu
chr1	148004422	T	A	0.00017	NBPF8	-	FALSE
chr1	143915747	G	A	0.00603		.	FALSE
chr4	17803748	T	A	0.00859	DCAF16	-	FALSE
chr20	10036845	A	G	0.00110	SNAP25-AS1,ANKEF1	+,-	FALSE
chr2	37329307	T	C	0.00137		.	FALSE	AluJr4	SINE,Alu
chr1	173864944	G	T	0.00415		.	FALSE
chr2	206983132	T	C	0.00861		.	FALSE	AluJb	SINE,Alu
chr19	39669597	T	C	0.00610	PAK4	+	FALSE	(TG)n	SINE,Alu
chr1	146649854	C	T	0.00033	PDIA3P1	+	FALSE
chr15	86290940	A	C	1.28576E-05	AKAP13	+	FALSE
chr1	1597403	C	T	0.00015	CDK11B,SLC35E2B	-	FALSE
chr2	71411977	T	A	0.00468	PAIP2B	-	FALSE
chr1	44818525	T	C	0.00235	ERI3	-	FALSE
chr11	125452298	A	G	0.00583	EI24,STT3A-AS1	+,-	FALSE
chr1	118502732	C	T	0.00151	WDR3,SPAG17	+,-	FALSE
chr2	10179657	A	C	0.00035		.	FALSE	L1ME4b	SINE,Alu
chr1	38279666	C	T	0.00521	MTF1	-	FALSE	(T)n	SINE,Alu
chr2	26613949	A	G	0.00669	EPT1	+	FALSE
chr1	900505	G	C	0.00388	KLHL17	+	FALSE
chr1	25655853	A	G	0.00147	RSRP1,RHD	+,-	FALSE	AluSz	SINE,Alu
chr1	8072233	T	C	0.00647	ERRFI1	-	FALSE
chr2	190636411	C	G	0.00870	ORMDL1	-	FALSE
chrX	123046892	A	G	0.00064	XIAP	+	TRUE	AluSx	SINE,Alu
chr2	201774264	T	C	0.00099		.	FALSE	AluSz	SINE,Alu
chr15	42192345	T	C	0.00039	EHD4	-	TRUE
chr1	16889503	T	C	0.00130	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr1	53291435	A	G	0.00790	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	19934879	T	C	0.00454	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr2	9770610	A	G	0.00466	YWHAQ	-	FALSE
chrX	71492446	A	T	0.00281		.	FALSE
chr1	115275398	T	G	0.00474	CSDE1	-	FALSE
chr3	24019990	A	G	0.00308	NR1D2	+	FALSE
chr2	120439459	C	A	0.00273	TMEM177	+	FALSE
chr9	119162301	A	T	0.00778	PAPPA,PAPPA-AS1	+,-	FALSE	(GAAA)n	SINE,Alu
chr2	176791182	T	C	0.00015	LNPK	-	TRUE	MSTD	SINE,Alu
chr3	10192709	C	T	0.00082	VHL	+	FALSE	AluSx1	SINE,Alu
chr8	11701429	T	C	0.00758	CTSB	-	TRUE	AluSx1	SINE,Alu
chr19	39440966	T	C	0.00011	FBXO17	-	FALSE
chr1	19566382	A	G	0.00513	LOC101927895,EMC1	+,-	FALSE
chr5	64964627	T	C	2.01273E-05	SGTB	-	TRUE	AluSx1	SINE,Alu
chr1	145689566	A	G	0.00331	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	40923019	G	A	0.00019	ZFP69B	+	FALSE
chr1	11347155	C	T	0.00366	UBIAD1	+	FALSE
chr16	88789702	G	A	0.00125	PIEZO1	-	FALSE
chr3	98304403	G	A	0.00997	CPOX	-	FALSE
chr1	145509570	A	G	0.00037	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	94703005	C	G	0.00180	ARHGAP29	-	FALSE
chr1	145513031	A	G	0.00014	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr2	217366192	T	A	0.00067		.	FALSE
chr2	85776621	T	C	0.00194	GGCX	-	TRUE	AluSz6	SINE,Alu
chr1	46075191	C	A	0.00457	NASP	+	FALSE	A-rich	SINE,Alu
chr1	1597356	G	C	0.00995	CDK11B,SLC35E2B	-	FALSE
chr1	145513098	A	G	0.00067	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr17	65335445	T	C	0.00084	PSMD12	-	TRUE	AluSx	SINE,Alu
chr12	133314509	T	C	0.00229	ANKLE2	-	TRUE	AluJr	SINE,Alu
chr7	6202056	G	A	0.00019	CYTH3	-	FALSE
chr1	205687358	T	C	0.00692	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	17766126	A	G	0.00017	RCC2	-	FALSE
chr1	94995653	A	C	0.00035	F3	-	FALSE	AluSx	SINE,Alu
chr6	42856007	A	G	0.00212	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	36067752	T	C	0.00123	PSMB2	-	TRUE	AluSz	SINE,Alu
chr15	91044382	A	G	0.00453	IQGAP1	+	FALSE
chr1	202984020	A	T	0.00842	TMEM183A,TMEM183B	+	FALSE
chr1	168220427	A	G	0.00670		.	FALSE	AluSz6	SINE,Alu
chr1	246931057	A	G	0.00048	SCCPDH	+	FALSE
chr2	77745788	T	C	0.00000	LRRTM4	-	FALSE
chr1	36067760	T	C	0.00768	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	117531179	G	A	0.00116	PTGFRN	+	FALSE
chr1	119683390	G	A	0.00283	LOC101929147	+	FALSE
chr1	16910172	G	A	0.00023	NBPF1	-	FALSE
chr3	121351277	A	T	0.00388	HCLS1	-	FALSE
chr1	144821900	C	G	6.24876E-05	NBPF20,NBPF9	+	FALSE
chr1	6283548	A	G	0.00286	ICMT	-	FALSE
chr1	16952481	A	G	0.00093	CROCCP2	-	FALSE
chr1	9427842	A	G	0.00923	SPSB1	+	FALSE
chr20	35409839	T	C	0.00556	SOGA1	-	TRUE	AluSx	SINE,Alu
chr3	45960851	C	T	0.00299	FYCO1	-	FALSE
chr1	93826819	A	T	0.00086	DR1	+	FALSE	(GTTTT)n	SINE,Alu
chr1	116234313	A	G	0.00016	VANGL1	+	FALSE
chr2	206983298	T	C	0.00811		.	FALSE	AluJb	SINE,Alu
chr6	160100882	T	C	3.93365E-05	SOD2	-	TRUE	AluSz	SINE,Alu
chr19	42375627	A	G	0.00463		.	FALSE	AluSx	SINE,Alu
chr2	96934504	T	C	0.00021	CIAO1	+	FALSE
chr4	57326291	A	G	0.00017	PAICS	+	TRUE	AluJr	SINE,Alu
chr2	37430603	T	C	0.00483	CEBPZOS,CEBPZ	+,-	FALSE
chr17	65334886	T	C	8.05380E-09	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	23636452	A	G	0.00294	HNRNPR	-	FALSE
chr12	98943187	A	G	2.29648E-09	TMPO	+	TRUE	AluSz	SINE,Alu
chr4	140394600	G	A	0.00950	RAB33B	+	FALSE
chr1	94351063	A	T	0.00907	GCLM	-	FALSE
chr1	9161011	T	C	7.97270E-05		.	FALSE	AluJb	SINE,Alu

RBP	TRIM25
Knock-Method	siRNA
RBP Family	Non-canonical_RBP
Biosample Name	T47D
Tissue Type	Breast
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE79586
Platform	GPL167891
Pubmed ID	28813674

TRIM25 - Target Gene Network