| RBP | WDR5 |
| Knock-Method | shRNA |
| RBP Family | eIF2A |
| Biosample Name | PDXs |
| Tissue Type | Breast |
| Biosample Type | Cell line |
| # of Control | 3 |
| # of Treat | 3 |
| Species | Human |
| Data Source | GEO |
| Profile ID | GSE113288 |
| Platform | GPL9115 |
| Pubmed ID | 31752957 |
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| Chrom | Site | Ref_allele | Alt_allele | Pvalue | Genename | Strand | KnownRNAediting | RepeatName | RepeatFamily |
|---|---|---|---|---|---|---|---|---|---|
| chr6 | 42857028 | A | G | 0.00064 | RPL7L1 | + | TRUE | AluSp | SINE,Alu |
| chr1 | 20519808 | G | A | 0.00882 | UBXN10 | + | FALSE | ||
| chr1 | 228880466 | G | A | 0.00216 | RHOU | + | FALSE | ||
| chr1 | 26755643 | A | G | 0.00068 | LIN28A | + | FALSE | AluSc | SINE,Alu |
| chr7 | 116339672 | C | T | 0.00876 | MET | + | FALSE | ||
| chr1 | 9161231 | T | C | 0.00481 | . | FALSE | AluSx | SINE,Alu | |
| chr2 | 86251114 | T | C | 0.00709 | . | FALSE | AluSx | SINE,Alu | |
| chr1 | 163116048 | G | T | 3.38683E-05 | RGS5 | - | FALSE | ||
| chr1 | 153932212 | G | C | 0.00340 | SLC39A1 | - | FALSE | ||
| chr14 | 23795204 | G | T | 0.00938 | BCL2L2-PABPN1,PABPN1 | + | FALSE | ||
| chr5 | 79279310 | T | A | 0.00167 | MTX3 | - | FALSE | ||
| chr1 | 16929100 | C | T | 0.00249 | NBPF1 | - | FALSE | LTR16B2 | SINE,Alu |
| chr16 | 23582262 | T | G | 0.00101 | UBFD1 | + | FALSE | ||
| chr1 | 33148196 | A | G | 0.00303 | SYNC,RBBP4 | +,- | FALSE | AluSg | SINE,Alu |
| chr5 | 49692633 | T | G | 0.00808 | EMB | - | FALSE | ||
| chr1 | 36529549 | A | G | 0.00806 | . | FALSE | AluJr | SINE,Alu | |
| chr19 | 53914448 | A | G | 0.00583 | ZNF765 | + | TRUE | AluSx | SINE,Alu |
| chr9 | 115447534 | T | C | 0.00203 | INIP | - | TRUE | AluJb | SINE,Alu |
| chr1 | 178447798 | T | C | 2.92578E-05 | RASAL2 | + | FALSE | ||
| chr19 | 45406536 | G | T | 0.00518 | TOMM40 | + | FALSE | ||
| chr1 | 225682175 | C | T | 0.00610 | ENAH | - | FALSE | ||
| chr2 | 185802243 | C | A | 0.00172 | ZNF804A | + | FALSE | ||
| chr1 | 144615138 | T | G | 0.00196 | NBPF20,NBPF9 | + | FALSE | ||
| chr12 | 98942904 | A | G | 0.00259 | TMPO | + | TRUE | AluSc | SINE,Alu |
| chr3 | 197611262 | A | G | 0.00208 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 21545088 | T | C | 0.00737 | ECE1 | - | FALSE | AluSx1 | SINE,Alu |
| chr1 | 204525713 | A | G | 0.00501 | MDM4 | + | TRUE | AluSz | SINE,Alu |
| chr4 | 109551183 | T | A | 0.00270 | RPL34 | + | FALSE | ||
| chr2 | 152976703 | T | A | 0.00126 | STAM2 | - | FALSE | ||
| chr1 | 93803522 | T | C | 0.00163 | CCDC18-AS1 | - | TRUE | AluJr | SINE,Alu |
| chr1 | 2115914 | G | T | 0.00970 | PRKCZ,FAAP20 | +,- | FALSE | ||
| chr1 | 143399383 | T | A | 0.00198 | . | FALSE | L1MC4 | SINE,Alu | |
| chr1 | 26802457 | C | A | 0.00962 | HMGN2 | + | FALSE | ||
| chr1 | 17314702 | C | T | 0.00140 | ATP13A2 | - | FALSE | ||
| chr19 | 3465142 | T | C | 0.00100 | NFIC | + | FALSE | ||
| chr15 | 40954864 | A | G | 0.00636 | KNL1 | + | TRUE | ||
| chr4 | 169911112 | C | A | 0.00142 | CBR4 | - | FALSE | ||
| chr1 | 3546137 | A | C | 0.00778 | TPRG1L | + | FALSE | AluSz | SINE,Alu |
| chr1 | 10520154 | T | C | 0.00018 | . | FALSE | AluSx | SINE,Alu | |
| chr16 | 23478710 | C | A | 0.00335 | GGA2 | - | FALSE | (AC)n | SINE,Alu |
| chr19 | 9672979 | T | C | 0.00028 | . | FALSE | AluSx3 | SINE,Alu | |
| chr6 | 158613390 | T | C | 0.00416 | GTF2H5 | + | FALSE | ||
| chr1 | 109239334 | A | T | 0.00035 | PRPF38B | + | FALSE | ||
| chr1 | 1152631 | C | A | 0.00439 | SDF4 | - | FALSE | ||
| chr1 | 113672634 | A | G | 0.00967 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 54692358 | G | A | 0.00195 | SSBP3 | - | FALSE | ||
| chr1 | 10518733 | T | C | 0.00541 | . | FALSE | AluSx1 | SINE,Alu | |
| chr5 | 125961011 | A | G | 0.00075 | PHAX | + | TRUE | AluSz | SINE,Alu |
| chr3 | 10192753 | A | G | 0.00069 | VHL | + | TRUE | AluSx1 | SINE,Alu |
| chr2 | 37479862 | C | T | 0.00603 | PRKD3 | - | FALSE | ||
| chr6 | 42981526 | C | G | 0.00129 | MEA1 | - | FALSE | ||
| chr19 | 42376711 | A | G | 5.78075E-06 | . | FALSE | AluSp | SINE,Alu | |
| chr1 | 36320634 | T | C | 0.00190 | AGO4 | + | FALSE | ||
| chr4 | 57326126 | A | G | 0.00790 | PAICS | + | TRUE | AluJr | SINE,Alu |
| chr8 | 143352528 | A | C | 0.00312 | TSNARE1 | - | FALSE | ||
| chr15 | 63363384 | C | A | 0.00161 | TPM1 | + | FALSE | ||
| chr1 | 211533352 | A | G | 0.00025 | TRAF5 | + | FALSE | ||
| chr1 | 1255401 | G | T | 0.00216 | CPSF3L | - | FALSE | (GCAGG)n | SINE,Alu |
| chr1 | 65693725 | C | T | 0.00202 | AK4 | + | FALSE | ||
| chr1 | 179077613 | T | C | 0.00731 | ABL2 | - | FALSE | ||
| chr1 | 153617980 | A | G | 0.00272 | CHTOP | + | FALSE | ||
| chr9 | 128729384 | G | C | 0.00059 | PBX3 | + | FALSE | ||
| chr1 | 1650787 | T | C | 0.00071 | CDK11B,CDK11A | - | FALSE | ||
| chr19 | 42376872 | A | G | 0.00647 | . | FALSE | AluSp | SINE,Alu | |
| chr2 | 214182561 | C | T | 0.00703 | SPAG16 | + | FALSE | L1MC1 | SINE,Alu |
| chr1 | 109793319 | C | T | 0.00027 | CELSR2 | + | FALSE | ||
| chr1 | 93828523 | T | A | 0.00155 | . | FALSE | |||
| chr2 | 55516903 | G | A | 3.31807E-05 | CCDC88A | - | FALSE | (GA)n | SINE,Alu |
| chr15 | 101845309 | A | G | 0.00689 | PCSK6 | - | FALSE | ||
| chr2 | 217366534 | A | G | 0.00700 | . | FALSE | AluSz | SINE,Alu | |
| chr1 | 19238562 | G | A | 3.36880E-06 | IFFO2 | - | FALSE | ||
| chr2 | 24224134 | A | G | 0.00333 | . | FALSE | AluSp | SINE,Alu | |
| chr4 | 39550978 | T | C | 3.11849E-06 | UGDH-AS1,SMIM14 | +,- | FALSE | AluSz | SINE,Alu |
| chr7 | 29961659 | C | G | 7.23387E-07 | SCRN1 | - | FALSE | ||
| chr3 | 100083423 | T | C | 0.00678 | TOMM70 | - | FALSE | FAM | SINE,Alu |
| chr1 | 160967754 | T | C | 0.00563 | F11R | - | TRUE | (T)n | SINE,Alu |
| chr2 | 99812289 | A | G | 0.00282 | MRPL30 | + | TRUE | AluSx | SINE,Alu |
| chr2 | 32532840 | A | G | 0.00243 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 33149373 | A | G | 0.00264 | SYNC,RBBP4 | +,- | FALSE | AluSx1 | SINE,Alu |
| chr7 | 107789927 | T | C | 0.00111 | NRCAM | - | FALSE | ||
| chr1 | 100343254 | G | A | 0.00725 | AGL | + | FALSE | ||
| chr9 | 34088016 | G | A | 0.00226 | DCAF12 | - | FALSE | ||
| chr5 | 125962175 | A | G | 0.00020 | PHAX | + | TRUE | AluSc | SINE,Alu |
| chr6 | 150045755 | T | C | 0.00041 | NUP43 | - | TRUE | AluSq | SINE,Alu |
| chr1 | 31344952 | C | T | 0.00842 | SDC3 | - | FALSE | ||
| chr5 | 130538076 | A | G | 0.00045 | LYRM7 | + | TRUE | AluSp | SINE,Alu |
| chr1 | 19199221 | C | T | 0.00095 | ALDH4A1 | - | FALSE | ||
| chr1 | 1717502 | T | G | 0.00239 | GNB1 | - | FALSE | ||
| chr1 | 21780000 | G | T | 0.00153 | NBPF3 | + | FALSE | ERVL-E-int | SINE,Alu |
| chr8 | 57872143 | C | T | 0.00037 | IMPAD1 | - | FALSE | ||
| chr1 | 10520331 | C | T | 0.00065 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 36522460 | A | G | 0.00407 | . | FALSE | AluSc | SINE,Alu | |
| chr8 | 145159718 | G | C | 0.00409 | MAF1 | + | FALSE | ||
| chr3 | 155660279 | A | G | 0.00594 | . | FALSE | |||
| chr1 | 45279898 | C | T | 0.00271 | . | FALSE | (TCTT)n | SINE,Alu | |
| chr15 | 41590999 | A | G | 0.00049 | OIP5-AS1 | + | TRUE | AluSx1 | SINE,Alu |
| chr1 | 10517672 | T | C | 0.00070 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 20976075 | T | C | 0.00135 | PINK1,PINK1-AS | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 220231946 | T | C | 0.00705 | RNU5F-1,BPNT1 | +,- | FALSE | AluSz | SINE,Alu |
| chr3 | 156259317 | T | C | 0.00189 | SSR3 | - | TRUE | AluSq2 | SINE,Alu |
| chr1 | 28826085 | A | G | 0.00153 | PHACTR4 | + | TRUE | AluJb | SINE,Alu |
| chr1 | 20978302 | A | T | 0.00038 | PINK1-AS,DDOST | - | FALSE | AluY | SINE,Alu |
| chr1 | 16892938 | T | C | 0.00569 | NBPF1 | - | FALSE | ||
| chr14 | 19686329 | G | A | 0.00117 | DUXAP10 | + | FALSE | ||
| chr1 | 35648844 | C | A | 0.00313 | SFPQ | - | FALSE | AluSx3 | SINE,Alu |
| chr4 | 2940485 | T | C | 0.00676 | NOP14-AS1,NOP14 | +,- | FALSE | AluJo | SINE,Alu |
| chr1 | 33148691 | A | G | 0.00032 | SYNC,RBBP4 | +,- | FALSE | AluSc | SINE,Alu |
| chr18 | 33831189 | C | A | 0.00763 | MOCOS | + | FALSE | ||
| chr3 | 15113042 | C | T | 4.09809E-05 | RBSN | - | FALSE | ||
| chr1 | 46075188 | C | A | 0.00199 | NASP | + | FALSE | A-rich | SINE,Alu |
| chr17 | 46941448 | G | T | 0.00017 | CALCOCO2 | + | FALSE | AluSz6 | SINE,Alu |
| chr19 | 21474901 | T | C | 1.34658E-06 | ZNF708 | - | TRUE | AluSc | SINE,Alu |
| chr1 | 157094053 | G | A | 0.00740 | . | FALSE | A-rich | SINE,Alu | |
| chr1 | 23636277 | A | T | 0.00632 | HNRNPR | - | FALSE | ||
| chr3 | 44791343 | T | C | 0.00539 | KIAA1143 | - | FALSE | AluJr | SINE,Alu |
| chr1 | 53288924 | A | G | 1.39497E-05 | ZYG11B | + | TRUE | AluJo | SINE,Alu |
| chr1 | 65330637 | C | T | 0.00251 | JAK1 | - | FALSE | ||
| chr1 | 16890320 | T | C | 0.00045 | NBPF1 | - | FALSE | ||
| chr5 | 49692280 | T | C | 9.73531E-05 | EMB | - | FALSE | L2c | SINE,Alu |
| chr6 | 26096636 | A | G | 0.00531 | . | FALSE | AluSg | SINE,Alu | |
| chr1 | 109816293 | G | C | 0.00759 | CELSR2 | + | FALSE | ||
| chr17 | 41144581 | A | C | 0.00806 | RUNDC1 | + | FALSE | AluSx | SINE,Alu |
| chr1 | 210004199 | C | G | 0.00531 | DIEXF | + | FALSE | ||
| chr1 | 46827871 | G | A | 0.00014 | NSUN4 | + | FALSE | ||
| chr5 | 52393421 | C | T | 0.00144 | MOCS2 | - | FALSE | L1MA9 | SINE,Alu |
| chr1 | 19586532 | A | G | 0.00166 | MRTO4 | + | TRUE | AluSz | SINE,Alu |
| chr19 | 9672919 | T | C | 0.00097 | . | FALSE | AluSx3 | SINE,Alu | |
| chr1 | 32799439 | C | T | 0.00239 | MARCKSL1 | - | FALSE | ||
| chr1 | 211921702 | T | C | 0.00014 | LPGAT1 | - | FALSE | ||
| chr4 | 2516791 | T | G | 4.75740E-05 | RNF4 | + | FALSE | ||
| chr2 | 231032372 | A | G | 0.00691 | . | FALSE | MLT1H | SINE,Alu | |
| chr19 | 21367088 | A | G | 0.00018 | ZNF431 | + | TRUE | AluSc | SINE,Alu |
| chr2 | 29023121 | G | T | 0.00077 | PPP1CB | + | FALSE | ||
| chr2 | 8996878 | A | T | 9.26766E-05 | MBOAT2 | - | FALSE | AluSz | SINE,Alu |
| chr7 | 144060286 | A | G | 0.00674 | ARHGEF5 | + | FALSE | ||
| chr1 | 16933658 | G | A | 0.00699 | NBPF1 | - | FALSE | GA-rich | SINE,Alu |
| chr10 | 13234356 | A | T | 3.19668E-07 | MCM10 | + | FALSE | ||
| chr14 | 21928999 | T | C | 2.57107E-05 | RAB2B | - | TRUE | AluSp | SINE,Alu |
| chr1 | 1252749 | T | C | 0.00875 | CPSF3L | - | TRUE | AluSp | SINE,Alu |
| chr1 | 10517314 | T | C | 0.00617 | . | FALSE | AluJr | SINE,Alu | |
| chr4 | 165999189 | T | C | 0.00614 | TMEM192 | - | TRUE | FLAM_C | SINE,Alu |
| chr3 | 73115126 | A | T | 0.00228 | PPP4R2 | + | FALSE | ||
| chr3 | 17200677 | T | G | 0.00371 | TBC1D5 | - | FALSE | ||
| chr1 | 145688665 | T | A | 0.00015 | NBPF20,NBPF10,RNF115 | + | FALSE | ||
| chr1 | 26673076 | G | A | 0.00465 | AIM1L | - | FALSE | ||
| chr1 | 144868170 | C | T | 0.00750 | NBPF20,PDE4DIP | +,- | FALSE | ||
| chr1 | 150199123 | G | T | 0.00625 | ANP32E | - | FALSE | ||
| chr1 | 566933 | A | G | 3.50078E-05 | . | FALSE | |||
| chr1 | 16011005 | G | C | 0.00616 | PLEKHM2 | + | FALSE | (GCG)n | SINE,Alu |
| chr9 | 133777993 | G | T | 0.00959 | FIBCD1 | - | FALSE | ||
| chr1 | 52306087 | C | T | 0.00022 | NRDC | - | FALSE | (TCA)n | SINE,Alu |
| chr1 | 21940555 | C | T | 0.00907 | RAP1GAP | - | FALSE | ||
| chr1 | 9642828 | T | A | 0.00148 | SLC25A33 | + | FALSE | ||
| chr1 | 10520117 | T | C | 0.00078 | . | FALSE | AluSx | SINE,Alu | |
| chr1 | 9330479 | C | T | 0.00352 | H6PD | + | FALSE | ||
| chr5 | 79279309 | T | G | 0.00167 | MTX3 | - | FALSE | ||
| chr2 | 101886749 | T | G | 0.00534 | CNOT11 | + | FALSE | ||
| chr16 | 66923452 | A | G | 0.00065 | PDP2 | + | TRUE | AluSz | SINE,Alu |
| chr1 | 16946336 | G | A | 0.00409 | CROCCP2 | - | FALSE | ||
| chr1 | 28861636 | G | A | 0.00754 | RCC1 | + | FALSE | (GCATGT)n | SINE,Alu |
| chr2 | 44115183 | T | A | 0.00914 | LRPPRC | - | FALSE | ||
| chr18 | 6986259 | G | A | 5.32960E-05 | LAMA1 | - | FALSE | ||
| chr16 | 66765441 | G | T | 4.44089E-16 | DYNC1LI2 | - | FALSE | L2c | SINE,Alu |
| chr2 | 55516891 | G | A | 2.12747E-05 | CCDC88A | - | FALSE | (GA)n | SINE,Alu |
| chr12 | 133298121 | A | G | 1.85542E-11 | PGAM5 | + | TRUE | AluJo | SINE,Alu |
| chr1 | 46164678 | T | C | 0.00773 | IPP | - | TRUE | AluJb | SINE,Alu |
| chr1 | 46126142 | G | C | 0.00171 | GPBP1L1 | - | FALSE | ||
| chr1 | 19542354 | T | C | 0.00684 | LOC101927895,EMC1 | +,- | FALSE | AluSz | SINE,Alu |
| chr11 | 94801640 | A | C | 0.00790 | SRSF8 | + | FALSE | ||
| chr1 | 54692674 | A | G | 0.00864 | SSBP3 | - | FALSE | ||
| chr3 | 44791398 | T | C | 0.00081 | KIAA1143 | - | TRUE | AluJr | SINE,Alu |
| chr7 | 158719106 | G | A | 0.00048 | WDR60 | + | FALSE | ||
| chr1 | 165631670 | T | G | 0.00197 | ALDH9A1 | - | FALSE | ||
| chr1 | 33148214 | A | G | 0.00734 | SYNC,RBBP4 | +,- | FALSE | AluSg | SINE,Alu |
| chr3 | 44791355 | T | C | 0.00468 | KIAA1143 | - | TRUE | AluJr | SINE,Alu |
| chr1 | 100489619 | A | G | 0.00319 | SLC35A3 | + | TRUE | ||
| chr1 | 173860808 | A | G | 0.00042 | . | FALSE | FLAM_A | SINE,Alu | |
| chr1 | 53288862 | A | G | 0.00155 | ZYG11B | + | TRUE | AluJo | SINE,Alu |
| chr1 | 10518591 | A | T | 0.00169 | . | FALSE | |||
| chr3 | 10290515 | G | A | 0.00904 | TATDN2 | + | FALSE | ||
| chr1 | 54571380 | A | G | 0.00332 | TCEANC2 | + | TRUE | AluSc | SINE,Alu |
| chr1 | 1255402 | C | G | 0.00333 | CPSF3L | - | FALSE | (GCAGG)n | SINE,Alu |
| chr5 | 151041871 | C | A | 0.00165 | SPARC | - | FALSE | ||
| chr7 | 20177664 | T | C | 0.00089 | MACC1,LOC101927668 | - | TRUE | AluSx | SINE,Alu |
| chr1 | 32799437 | C | T | 0.00318 | MARCKSL1 | - | FALSE | ||
| chr3 | 44791062 | T | C | 0.00124 | KIAA1143 | - | FALSE | ||
| chrX | 118672641 | T | C | 0.00027 | CXorf56 | - | TRUE | AluSx | SINE,Alu |
| chr6 | 42856131 | A | G | 0.00062 | RPL7L1 | + | TRUE | AluSz | SINE,Alu |
| chr1 | 8930561 | T | G | 0.00913 | ENO1 | - | FALSE | ||
| chr6 | 114181223 | A | G | 0.00365 | MARCKS | + | FALSE | ||
| chr3 | 121382204 | C | T | 0.00309 | GOLGB1 | - | FALSE | ||
| chr7 | 6501828 | C | A | 0.00110 | KDELR2 | - | FALSE | ||
| chr1 | 155039464 | C | T | 2.82294E-06 | EFNA4 | + | FALSE | ||
| chr6 | 44222158 | T | A | 0.00781 | SLC35B2 | - | FALSE | ||
| chr1 | 10520383 | T | C | 0.00401 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 3545191 | C | T | 5.51731E-05 | TPRG1L | + | FALSE | ||
| chr5 | 135513089 | T | A | 7.47633E-06 | SMAD5 | + | FALSE | ||
| chr19 | 53571306 | T | C | 0.00481 | ZNF160 | - | FALSE | ||
| chr2 | 68402794 | T | G | 0.00630 | PNO1 | + | FALSE | ||
| chr1 | 78483452 | C | T | 0.00739 | DNAJB4 | + | FALSE | L1MB7 | SINE,Alu |
| chr5 | 150647744 | A | G | 0.00036 | GM2A | + | TRUE | AluSc | SINE,Alu |
| chr1 | 206581246 | T | C | 0.00210 | SRGAP2 | + | FALSE | ||
| chr16 | 10625414 | T | C | 0.00015 | EMP2 | - | TRUE | AluSx | SINE,Alu |
| chr1 | 36068370 | T | C | 0.00789 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chrX | 77083538 | T | C | 0.00055 | MAGT1 | - | TRUE | AluSz6 | SINE,Alu |
| chr13 | 50273970 | C | T | 1.77946E-05 | KPNA3 | - | FALSE | ||
| chr3 | 121351277 | A | T | 0.00388 | HCLS1 | - | FALSE | ||
| chr1 | 110566328 | A | T | 0.00515 | AHCYL1 | + | FALSE | ||
| chr1 | 120839683 | G | A | 0.00875 | FAM72B | + | FALSE | ||
| chr1 | 6583066 | T | C | 0.00088 | NOL9 | - | TRUE | AluSx4 | SINE,Alu |
| chr1 | 11783009 | A | G | 7.55078E-05 | . | FALSE | AluSx | SINE,Alu | |
| chr1 | 6582558 | T | C | 0.00030 | NOL9 | - | TRUE | AluSx1 | SINE,Alu |
| chr2 | 206985727 | C | T | 0.00786 | . | FALSE | MIRc | SINE,Alu | |
| chr1 | 1594197 | C | T | 0.00097 | CDK11B,SLC35E2B | - | FALSE | ||
| chr2 | 114220055 | T | C | 9.23000E-05 | CBWD2 | + | FALSE | ||
| chr1 | 193054485 | T | C | 0.00439 | TROVE2 | + | FALSE | ||
| chr3 | 196315260 | T | C | 0.00102 | FBXO45 | + | FALSE | ||
| chr14 | 77581481 | C | A | 0.00997 | CIPC | + | FALSE | ||
| chr16 | 48387215 | A | G | 0.00864 | LONP2,MIR5095 | + | TRUE | AluJb | SINE,Alu |
| chr8 | 144357992 | A | G | 0.00780 | GLI4 | + | FALSE | ||
| chr1 | 214524496 | T | C | 0.00114 | PTPN14 | - | TRUE | AluSg | SINE,Alu |
| chr2 | 99772813 | A | G | 0.00670 | LIPT1 | + | TRUE | AluSx1 | SINE,Alu |
| chr17 | 45761109 | T | G | 0.00018 | . | FALSE | |||
| chr15 | 65442112 | T | C | 0.00529 | CLPX | - | TRUE | AluSg | SINE,Alu |
| chr7 | 32908135 | C | G | 0.00076 | KBTBD2 | - | FALSE | ||
| chr3 | 12613866 | T | C | 0.00043 | MKRN2 | + | FALSE | ||
| chr1 | 16384843 | G | C | 0.00049 | FAM131C | - | FALSE | ||
| chr1 | 10044367 | A | G | 5.42058E-05 | NMNAT1 | + | TRUE | AluSx1 | SINE,Alu |
| chr5 | 95223443 | C | T | 0.00255 | ELL2 | - | FALSE | ||
| chr1 | 144614931 | G | A | 0.00469 | NBPF20 | + | FALSE | ||
| chr1 | 28825465 | A | G | 0.00496 | PHACTR4 | + | TRUE | AluSg | SINE,Alu |
| chr1 | 35319550 | C | T | 0.00781 | SMIM12 | - | FALSE | AluSg | SINE,Alu |
| chr4 | 165998654 | T | C | 0.00953 | TMEM192 | - | TRUE | AluSg | SINE,Alu |
| chr1 | 788840 | T | C | 0.00299 | LINC01128 | + | FALSE | ||
| chr2 | 61764916 | A | C | 0.00189 | XPO1 | - | FALSE | (AC)n | SINE,Alu |
| chr1 | 9330740 | G | C | 0.00077 | H6PD | + | FALSE | ||
| chr5 | 40832555 | A | T | 0.00347 | RPL37 | - | FALSE | ||
| chr1 | 165728775 | C | T | 5.75449E-06 | TMCO1 | - | FALSE | ||
| chr19 | 19792403 | A | G | 1.20818E-05 | ZNF101 | + | TRUE | AluJb | SINE,Alu |
| chr1 | 6283296 | T | C | 0.00225 | ICMT | - | TRUE | AluSx3 | SINE,Alu |
| chr1 | 45987557 | G | C | 0.00921 | PRDX1 | - | FALSE | ||
| chr11 | 94801635 | G | T | 0.00844 | SRSF8 | + | FALSE | ||
| chr1 | 10519064 | T | C | 0.00012 | . | FALSE | AluSx3 | SINE,Alu | |
| chr1 | 11187199 | G | T | 0.00047 | MTOR | - | FALSE | ||
| chr5 | 34906750 | T | C | 0.00527 | RAD1 | - | TRUE | AluJo | SINE,Alu |
| chr1 | 6704652 | C | T | 0.00000 | DNAJC11 | - | FALSE | ||
| chr1 | 10517659 | T | C | 0.00010 | . | FALSE | AluSx1 | SINE,Alu | |
| chr5 | 40832549 | C | T | 2.26031E-05 | RPL37 | - | FALSE | ||
| chr1 | 709591 | G | A | 0.00226 | LOC100288069 | - | FALSE | ||
| chr4 | 128757415 | A | G | 0.00367 | . | FALSE | AluY | SINE,Alu | |
| chr2 | 170497651 | C | T | 0.00195 | . | FALSE | |||
| chr6 | 56972883 | T | C | 0.00939 | ZNF451 | + | FALSE | AluY | SINE,Alu |
| chr2 | 152334389 | A | G | 0.00308 | . | FALSE | AluSq | SINE,Alu | |
| chr1 | 1668943 | A | C | 0.00640 | SLC35E2 | - | FALSE | ||
| chr2 | 206983298 | T | C | 0.00811 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 93603177 | T | C | 0.00364 | MTF2 | + | FALSE | ||
| chrX | 77083617 | T | C | 3.46806E-05 | MAGT1 | - | TRUE | AluSz6 | SINE,Alu |
| chr19 | 57816349 | A | G | 8.96695E-06 | . | FALSE | AluY | SINE,Alu | |
| chr1 | 180991776 | C | A | 0.00664 | STX6 | - | FALSE | ||
| chr12 | 96661616 | A | G | 0.00057 | ELK3 | + | FALSE | ||
| chr1 | 26608014 | C | A | 0.00328 | . | FALSE | |||
| chr1 | 16768088 | G | A | 0.00063 | NECAP2 | + | FALSE | ||
| chr3 | 10005650 | C | T | 0.00698 | EMC3 | - | FALSE | ||
| chr1 | 145375858 | T | C | 0.00069 | NBPF20,NBPF10 | + | FALSE | ||
| chr12 | 56215102 | T | A | 0.00405 | DNAJC14 | - | FALSE | ||
| chr2 | 202028841 | A | G | 0.00641 | CFLAR | + | TRUE | AluSx1 | SINE,Alu |
| chr1 | 10517314 | T | C | 0.00073 | . | FALSE | AluJr | SINE,Alu | |
| chr5 | 151041885 | G | T | 0.00644 | SPARC | - | FALSE | ||
| chr11 | 33694645 | T | C | 2.61039E-05 | KIAA1549L | + | FALSE | ||
| chr1 | 24862643 | T | G | 0.00079 | RCAN3 | + | FALSE | ||
| chr1 | 28825337 | A | G | 0.00904 | PHACTR4 | + | TRUE | AluSg | SINE,Alu |
| chr1 | 19542679 | T | C | 0.00584 | LOC101927895,EMC1 | +,- | FALSE | FRAM | SINE,Alu |
| chr5 | 162902516 | T | C | 0.00226 | HMMR | + | FALSE | ||
| chr6 | 29911970 | G | A | 0.00284 | . | FALSE | |||
| chr7 | 91630345 | G | A | 0.00473 | AKAP9 | + | FALSE | ||
| chr1 | 52882970 | A | G | 0.00533 | PRPF38A | + | FALSE | ||
| chr17 | 42880118 | T | C | 0.00140 | GJC1 | - | TRUE | AluJb | SINE,Alu |