RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	3545194	C	G	0.00044	TPRG1L	+	FALSE
chr1	114306372	A	G	0.00243	RSBN1	-	FALSE
chr1	100547854	T	G	0.00080	MFSD14A	+	FALSE
chr2	208619377	A	G	0.00769	CCNYL1	+	TRUE	FAM	SINE,Alu
chr16	58054477	T	C	0.00180	USB1	+	FALSE
chr1	10517659	T	C	0.00516		.	FALSE	AluSx1	SINE,Alu
chr2	47401264	C	G	9.89170E-05	CALM2	-	FALSE
chr1	11084103	T	A	0.00044	TARDBP	+	FALSE
chr1	158057633	C	G	0.00031	KIRREL	+	FALSE
chr1	36534830	A	G	0.00470		.	FALSE	AluJo	SINE,Alu
chr1	16934178	C	T	0.00382	NBPF1	-	FALSE
chr1	1309464	C	T	1.11022E-16	AURKAIP1	-	FALSE
chr2	1636938	C	T	0.00072	PXDN	-	FALSE	(T)n	SINE,Alu
chr3	42643425	G	A	0.00482	NKTR	+	FALSE	L2a	SINE,Alu
chr1	24134721	T	C	0.00113	HMGCL	-	FALSE
chr5	70503890	A	T	0.00188		.	FALSE
chr3	57612973	T	C	0.00135	DENND6A,PDE12	+,-	FALSE	AluSz	SINE,Alu
chr2	181737842	C	T	0.00350	SCHLAP1	+	FALSE
chr1	214531239	C	T	6.46771E-05	PTPN14	-	FALSE
chr3	63996262	C	T	0.00273	PSMD6-AS2,PSMD6	+,-	FALSE
chr5	139931633	C	A	0.00014	SRA1	-	FALSE
chr3	10320968	T	A	0.00237	TATDN2	+	FALSE
chr6	44222158	T	A	0.00856	SLC35B2	-	FALSE
chr3	44790879	T	C	0.00453	KIAA1143	-	TRUE	AluY	SINE,Alu
chr17	42876730	T	C	0.00024	GJC1	-	TRUE	AluSz6	SINE,Alu
chr1	27731933	C	A	1.77427E-09	WASF2	-	FALSE
chr8	11701343	T	C	0.00280	CTSB	-	TRUE	AluSx1	SINE,Alu
chr17	18111804	T	G	0.00487	ALKBH5	+	FALSE	(TTTTGTT)n	SINE,Alu
chr1	19420619	C	G	0.00339	UBR4	-	FALSE
chr12	21654407	G	A	0.00654	RECQL	-	FALSE
chr16	89630630	C	T	0.00296	RPL13	+	FALSE
chr2	203741065	T	C	2.92684E-06		.	FALSE
chr2	3592674	C	A	0.00011	RNASEH1	-	FALSE
chr1	10517508	T	C	0.00034		.	FALSE	AluSx1	SINE,Alu
chr1	16894514	C	T	0.00270	NBPF1	-	FALSE
chr11	125526125	A	G	0.00374	CHEK1	+	TRUE	FRAM	SINE,Alu
chr1	160966352	T	C	3.14235E-07	F11R	-	TRUE	AluSg	SINE,Alu
chr6	36894337	G	A	0.00607	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr8	61534428	A	G	0.00274	RAB2A	+	FALSE
chr17	49042242	T	C	0.00054	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	109818151	T	C	0.00855	CELSR2	+	FALSE
chr1	33148635	A	G	5.38540E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	241796950	C	A	1.24743E-05	OPN3,CHML	-	FALSE
chr1	28567501	A	G	0.00887		.	FALSE
chr1	100659985	T	C	0.00600	DBT	-	FALSE	AluSx3	SINE,Alu
chr3	57882601	C	T	0.00987	SLMAP	+	FALSE
chr15	89739348	A	G	0.00035	ABHD2	+	FALSE	MER5A	SINE,Alu
chr5	65108215	A	G	0.00052	NLN	+	FALSE
chr5	10655842	C	T	0.00024	ANKRD33B	+	FALSE
chr1	145281633	C	A	0.00022	NBPF20,NOTCH2NL	+	FALSE
chr1	93298516	A	G	0.00493	FAM69A,RPL5	+,-	FALSE
chr1	1421531	C	A	0.00409	ATAD3B	+	FALSE
chr6	8014786	T	C	0.00086	BLOC1S5-TXNDC5,BLOC1S5,EEF1E1-BLOC1S5	-	TRUE	AluSz	SINE,Alu
chr2	27293350	A	T	0.00314	AGBL5,OST4	+,-	FALSE
chr1	109535117	C	T	0.00211	WDR47	-	FALSE
chr19	63697	G	A	0.00742	WASH5P	-	FALSE
chr2	3597974	T	C	1.93309E-05	RNASEH1	-	FALSE
chr1	53289873	A	G	0.00013	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr2	3622912	G	T	0.00000	RPS7	+	FALSE
chr1	1419888	A	G	0.00630	ATAD3B	+	TRUE	AluSp	SINE,Alu
chr11	31452788	A	G	0.00239	DNAJC24	+	TRUE	AluSx1	SINE,Alu
chr1	145369709	A	G	0.00073	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr1	100658578	G	A	0.00012	DBT	-	FALSE
chr1	55207985	G	A	0.00156	MROH7-TTC4,TTC4	+	FALSE
chr14	21929014	T	C	0.00749	RAB2B	-	TRUE	AluSp	SINE,Alu
chr8	11701429	T	C	0.00496	CTSB	-	TRUE	AluSx1	SINE,Alu
chr1	225682175	C	T	0.00610	ENAH	-	FALSE
chr12	124105948	C	T	0.00778	EIF2B1	-	FALSE
chr7	44917405	C	T	0.00024	PURB	-	FALSE	AluSz	SINE,Alu
chr3	33877626	G	A	2.14228E-08	PDCD6IP	+	FALSE
chr8	48890109	A	G	0.00750	MCM4	+	TRUE	AluJb	SINE,Alu
chr3	157161198	A	T	0.00486	VEPH1,PTX3	+,-	FALSE
chr1	27107950	G	A	0.00249	ARID1A	+	FALSE
chr3	160219095	G	A	0.00620	KPNA4	-	FALSE	A-rich	SINE,Alu
chr1	16889502	T	C	0.00178	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr2	69746296	C	T	0.00620	AAK1	-	FALSE
chr1	46032311	A	G	0.00362	AKR1A1	+	FALSE
chr1	46075171	A	C	0.00280	NASP	+	FALSE	A-rich	SINE,Alu
chr1	91990445	A	G	0.00784	CDC7	+	FALSE	LFSINE_Vert	SINE,Alu
chr1	146643580	G	A	0.00113	PRKAB2	-	FALSE
chr2	143638998	G	A	0.00496	KYNU	+	FALSE
chr1	24288535	A	T	0.00271	PNRC2	+	FALSE
chr9	68413593	C	A	0.00342		.	FALSE
chr1	900723	T	G	0.00051	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr11	9466935	T	G	0.00439	IPO7	+	FALSE
chr1	1647893	C	T	0.00509	CDK11B,CDK11A	-	FALSE
chr1	145369354	C	T	0.00872	NBPF20,NBPF10	+	FALSE
chr16	48386425	A	G	0.00152	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr1	156565045	C	A	0.00995	GPATCH4	-	FALSE
chr15	23282993	G	A	0.00337	HERC2P2	-	FALSE
chr5	77655392	T	C	0.00080	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu
chr1	70718276	G	T	0.00836		.	FALSE
chr1	10519148	T	C	0.00611		.	FALSE	AluSx3	SINE,Alu
chr1	1668089	G	T	0.00801	SLC35E2	-	FALSE	AluSz	SINE,Alu
chr1	89447715	T	G	0.00021	KYAT3,RBMXL1	-	FALSE
chr1	109818158	C	T	0.00212	CELSR2	+	FALSE
chr5	53841241	T	A	0.00179	SNX18	+	FALSE
chr1	201434740	G	A	0.00471	PHLDA3	-	FALSE
chr19	13884096	A	G	0.00049	MRI1	+	TRUE	AluSz	SINE,Alu
chr1	10520117	T	C	0.00078		.	FALSE	AluSx	SINE,Alu
chr6	150045755	T	C	0.00041	NUP43	-	TRUE	AluSq	SINE,Alu
chr1	38279683	A	T	0.00685	MTF1	-	FALSE
chr3	10192717	A	G	3.16601E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	37327702	T	C	0.00179		.	FALSE
chr12	1086062	G	T	0.00847	RAD52	-	FALSE	L2	SINE,Alu
chr2	74645427	A	G	0.00011	C2orf81	-	FALSE
chr6	43747964	G	A	0.00542	VEGFA	+	FALSE
chr19	200571	T	C	0.00079	LINC01002	-	FALSE
chr3	98516118	T	A	0.00541	DCBLD2	-	FALSE
chr5	118174735	T	C	0.00046	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	21544601	C	T	0.00196	ECE1	-	FALSE
chr3	149679162	T	A	0.00235	RNF13	+	FALSE
chr11	65179815	C	A	0.00447	FRMD8	+	FALSE
chr1	1534205	G	A	1.69659E-11	FNDC10	-	FALSE
chr1	145281408	C	T	0.00220	NBPF20,NOTCH2NL	+	FALSE
chr1	16892256	T	C	0.00370	NBPF1	-	FALSE
chr1	68624878	C	T	0.00465	GNG12-AS1,WLS	+,-	FALSE
chr2	101893247	C	A	0.00237	RNF149	-	FALSE	(A)n	SINE,Alu
chr7	44841237	T	A	8.97456E-05	PPIA	+	FALSE
chr3	15113847	T	C	0.00026	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	179041705	A	T	0.00068	FAM20B	+	FALSE
chr5	151041885	G	T	0.00644	SPARC	-	FALSE
chr1	121115958	T	C	0.00818	SRGAP2-AS1,SRGAP2D,SRGAP2B,SRGAP2C	+,-	FALSE
chr1	19585207	G	A	0.00672	MRTO4	+	FALSE
chr1	206579936	A	G	0.00424	SRGAP2	+	FALSE
chr7	143003524	G	T	3.66232E-05	CASP2	+	FALSE	AluY	SINE,Alu
chr1	154557171	G	A	0.00045	ADAR	-	FALSE	A-rich	SINE,Alu
chr1	148241604	G	T	0.00756	NBPF8	-	FALSE	U1	SINE,Alu
chr1	145689533	A	G	0.00051	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	31905887	A	C	0.00245	SERINC2	+	FALSE
chr2	37329352	T	C	0.00403		.	FALSE	AluJr4	SINE,Alu
chr4	114135223	A	T	5.22810E-05	ANK2	+	FALSE
chr1	1684347	C	T	0.00550	NADK	-	FALSE
chr1	41088377	C	T	8.47840E-10	RIMS3	-	FALSE
chr15	42503336	C	T	0.00916	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr1	19543456	T	C	0.00760	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	127790249	A	G	0.00276	RUVBL1,SEC61A1	+,-	FALSE
chr1	19543457	T	C	0.00059	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	71411975	A	C	0.00463	PAIP2B	-	FALSE
chr1	45976147	G	A	0.00476	MMACHC	+	FALSE	AluJr	SINE,Alu
chr5	41917694	T	C	0.00784	C5orf51	+	FALSE
chr11	62299945	A	C	0.00314	AHNAK	-	FALSE
chr1	16717888	G	A	0.00206	SZRD1	+	FALSE
chr10	70502288	G	A	0.00347	CCAR1	+	FALSE
chr1	28825337	A	G	0.00313	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	16889014	C	T	0.00722	NBPF1	-	FALSE
chr4	9998493	A	G	5.94150E-05	SLC2A9	-	FALSE
chr3	196670094	G	C	0.00017	NCBP2-AS2	+	FALSE
chr2	118854086	G	C	0.00066	INSIG2	+	FALSE
chr19	58374130	C	T	0.00124	ZNF587	+	FALSE
chr1	184761312	T	C	0.00077	FAM129A	-	TRUE	AluJo	SINE,Alu
chr1	10520331	C	T	0.00280		.	FALSE	AluSx1	SINE,Alu
chr7	79848333	T	G	0.00322	GNAI1	+	FALSE
chr3	98515569	C	T	3.10862E-15	DCBLD2	-	FALSE
chr5	37290323	T	C	8.21848E-08		.	FALSE	AluSz	SINE,Alu
chr2	37331019	T	C	0.00033		.	FALSE	AluSx1	SINE,Alu
chr4	17802819	T	C	0.00409	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	11979814	G	A	0.00041	KIAA2013	-	FALSE
chr1	3545194	C	G	0.00176	TPRG1L	+	FALSE
chr1	33149486	A	G	0.00874	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	29041856	A	G	0.00756	GMEB1	+	TRUE	AluSq4	SINE,Alu
chr1	10041422	A	G	0.00115	NMNAT1	+	TRUE	AluYj4	SINE,Alu
chr9	21331119	C	T	0.00343	KLHL9	-	FALSE	L1M	SINE,Alu
chr3	42592874	T	C	9.28376E-05	SEC22C	-	FALSE	AluJr	SINE,Alu
chr6	24719404	C	A	0.00024		.	FALSE
chr1	110049203	G	C	0.00530		.	FALSE
chr10	75008815	T	C	5.77576E-09	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr16	10623571	T	C	0.00329	EMP2	-	TRUE	AluSp	SINE,Alu
chr5	52389811	T	G	0.00561	ITGA2	+	FALSE
chr17	43248581	C	T	0.00012	LOC105371795	-	FALSE
chr12	98943162	A	G	5.01524E-05	TMPO	+	TRUE	AluSz	SINE,Alu
chr3	49762662	G	T	6.99764E-06	IP6K1	-	FALSE
chr1	36068295	T	C	0.00057	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	201846632	C	T	7.46598E-05	IPO9	+	FALSE	(CA)n	SINE,Alu
chrX	131339006	T	A	0.00405	RAP2C	-	FALSE
chr16	81064494	A	G	8.13539E-06	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	10519946	T	C	0.00578		.	FALSE	AluJr	SINE,Alu
chr1	31902343	T	C	1.48709E-05	SERINC2	+	FALSE
chr1	10520174	T	C	0.00163		.	FALSE	AluSx	SINE,Alu
chr4	128758175	A	G	0.00385		.	FALSE	AluSx	SINE,Alu
chr1	173864944	G	T	0.00415		.	FALSE
chr1	118071289	A	G	0.00023		.	FALSE
chr3	42591046	C	A	0.00933	SEC22C	-	FALSE
chr1	184762498	T	C	0.00834	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	63881552	C	T	0.00293	ALG6	+	FALSE
chr12	19671149	C	T	0.00315	AEBP2	+	FALSE
chr1	87213188	C	A	0.00236	SH3GLB1	+	FALSE
chr10	15119789	T	C	0.00366	ACBD7	-	TRUE	AluSx1	SINE,Alu
chr1	6695423	T	G	9.25675E-05	THAP3,DNAJC11	+,-	FALSE
chr1	54382632	T	C	0.00219		.	FALSE	AluSq2	SINE,Alu
chr1	10520174	T	C	0.00413		.	FALSE	AluSx	SINE,Alu
chr2	86252080	T	C	0.00017	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	91486839	T	C	0.00514	ZNF644	-	FALSE
chr3	196555443	C	A	3.82991E-09	PAK2	+	FALSE
chr1	53711218	A	T	0.00838	LRP8	-	FALSE
chr3	40578843	A	G	0.00221	ZNF621	+	TRUE	AluJr	SINE,Alu
chr3	49053219	A	G	1.70535E-05	WDR6,DALRD3	+,-	FALSE
chr2	37431521	A	G	0.00783	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr6	160526905	C	A	0.00268	IGF2R	+	FALSE
chr1	155032752	A	G	0.00347	LOC100505666,ADAM15	+,-	FALSE
chr1	40147856	T	C	0.00205	HPCAL4	-	TRUE
chr18	47014856	T	A	0.00722	RPL17-C18orf32,RPL17	-	FALSE
chr20	62572487	A	C	0.00390	UCKL1	-	FALSE
chr1	24796838	A	G	0.00484	NIPAL3	+	FALSE	MER5A	SINE,Alu
chr7	44618353	T	C	0.00168	TMED4	-	TRUE	AluSq2	SINE,Alu
chr6	150045926	T	C	0.00053	NUP43	-	TRUE	AluSq	SINE,Alu
chr1	16061035	G	C	0.00089	PLEKHM2	+	FALSE
chr4	177252326	A	G	0.00098	SPCS3	+	TRUE
chr2	10050947	T	C	0.00273	TAF1B	+	FALSE
chr1	6282401	T	C	0.00469	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	148561089	T	C	0.00011	NBPF15	+	FALSE
chr1	91990450	A	T	0.00091	CDC7	+	FALSE	LFSINE_Vert	SINE,Alu
chr4	128958127	A	G	0.00556	ABHD18	+	TRUE	AluSx3	SINE,Alu
chr1	45280109	A	G	0.00251		.	FALSE	AluYk3	SINE,Alu
chr1	160967754	T	C	0.00563	F11R	-	TRUE	(T)n	SINE,Alu
chr2	219100202	C	T	0.00027	ARPC2	+	FALSE	AluJr	SINE,Alu
chr1	89649369	T	C	0.00333	GBP4	-	TRUE	AluJb	SINE,Alu
chr2	37329300	T	C	0.00590		.	FALSE	AluJr4	SINE,Alu
chr1	27250642	A	G	0.00020	NUDC	+	FALSE
chr1	204521724	A	G	0.00851	MDM4	+	TRUE	AluSg	SINE,Alu
chr12	125513906	C	A	0.00464		.	FALSE	AluSx1	SINE,Alu
chr16	10623576	T	C	0.00013	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	10519947	T	C	0.00534		.	FALSE	AluJr	SINE,Alu
chr5	93018884	A	C	0.00030	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr14	103372465	C	A	0.00600	TRAF3	+	FALSE	(AC)n	SINE,Alu
chr14	90865627	T	C	0.00162	CALM1	+	FALSE
chr1	109181304	C	A	0.00592	FAM102B	+	FALSE
chr1	33068221	A	G	0.00448	ZBTB8A	+	TRUE	AluY	SINE,Alu
chr12	124146067	A	G	1.77884E-06	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr2	191067763	A	T	0.00038	C2orf88	+	FALSE
chr14	74431191	A	G	0.00670	ENTPD5	-	FALSE
chr3	119212009	G	A	0.00241	POGLUT1	+	FALSE
chr1	27107948	G	A	0.00177	ARID1A	+	FALSE
chr1	6282259	T	C	0.00072	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	16889575	T	C	0.00467	NBPF1	-	TRUE
chr1	145689533	A	G	0.00618	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr2	170488325	A	G	0.00698	PPIG	+	FALSE
chr1	36068294	T	C	0.00321	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	206982257	T	C	0.00023		.	FALSE	AluSg7	SINE,Alu
chr6	97592894	A	C	0.00654	MMS22L	-	FALSE
chr6	46128910	A	G	0.00782	ENPP5	-	FALSE	(GT)n	SINE,Alu
chr1	117531096	C	T	0.00168	PTGFRN	+	FALSE
chr1	113247898	G	A	0.00077	RHOC	-	FALSE
chr1	145509493	A	G	0.00264	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	44088117	G	T	0.00584	PTPRF	+	FALSE	(T)n	SINE,Alu
chr3	122447574	A	C	0.00224	PARP14	+	FALSE
chr1	24798089	G	A	0.00815	NIPAL3	+	FALSE
chr3	124950419	C	A	0.00060	ZNF148	-	FALSE
chr1	569983	G	A	0.00568		.	FALSE
chr1	118167515	C	T	4.87028E-05	FAM46C	+	FALSE
chr1	53684924	A	G	0.00347	C1orf123	-	FALSE	L1MA5A	SINE,Alu
chr3	181430334	G	A	0.00305	SOX2-OT,SOX2	+	FALSE
chr1	36392543	G	T	0.00971		.	FALSE	(T)n	SINE,Alu
chr16	10623688	T	C	0.00766	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	10042955	A	G	0.00430	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	36068295	T	C	0.00076	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	17326540	G	A	0.00120	ATP13A2	-	FALSE
chr5	122359500	A	C	0.00358	PPIC	-	FALSE	(AC)n	SINE,Alu
chr3	10142949	C	T	0.00721	FANCD2,FANCD2OS	+,-	FALSE
chr1	33149400	A	G	0.00258	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr12	62928633	G	A	0.00307	MON2	+	FALSE
chr1	225683161	T	G	0.00168	ENAH	-	FALSE	(T)n	SINE,Alu
chr2	152334055	A	G	0.00064		.	FALSE	AluY	SINE,Alu
chr15	41591451	A	G	1.78515E-09	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr1	1595603	C	G	0.00017	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr2	174090636	T	A	0.00320	ZAK,MLK7-AS1	+,-	FALSE
chr3	14986104	T	C	0.00992	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr11	68523337	T	C	0.00016	CPT1A	-	TRUE	AluSq	SINE,Alu
chr1	16932181	C	T	0.00641	NBPF1	-	FALSE
chr2	65539437	C	T	0.00076	SPRED2	-	FALSE
chr6	116600774	C	G	0.00180	DSE,TSPYL1	+,-	FALSE
chr1	114515903	C	T	0.00169	HIPK1	+	FALSE
chr1	19542310	T	C	2.12437E-06	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	9629305	A	T	0.00591	ADAM17	-	FALSE
chr12	109039004	C	A	0.00564	CORO1C	-	FALSE
chr1	12073252	A	G	0.00990	MFN2	+	FALSE
chr5	132028864	G	A	0.00593	KIF3A	-	FALSE
chr1	100343254	G	A	0.00725	AGL	+	FALSE
chr1	150281017	A	G	0.00057	MRPS21	+	TRUE	AluSz	SINE,Alu
chr1	6681544	T	C	0.00031	PHF13	+	FALSE
chr1	222906392	C	T	0.00804	BROX	+	FALSE	AluSx	SINE,Alu
chr1	16259813	A	G	0.00475	SPEN	+	FALSE
chr2	91805938	A	G	0.00000		.	FALSE	MLT1H1	SINE,Alu
chr1	36068231	T	C	0.00935	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	156259340	T	C	0.00070	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	150704413	T	C	0.00236	CTSS	-	TRUE	AluJo	SINE,Alu
chr2	75888160	A	C	0.00599	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr1	19071752	T	C	0.00503	PAX7	+	FALSE
chr19	42753034	A	G	0.00883	ERF	-	FALSE
chr17	37618251	T	G	0.00959	CDK12	+	FALSE	G-rich	SINE,Alu
chr16	10625320	T	C	0.00923	EMP2	-	TRUE	AluSx	SINE,Alu
chr1	19441410	G	A	7.84348E-05	UBR4	-	FALSE
chr1	11734730	C	T	4.90909E-09	MAD2L2	-	FALSE
chr1	118165973	C	T	3.23914E-05	FAM46C	+	FALSE
chr14	74179051	T	C	0.00982	PNMA1	-	FALSE	Charlie15b	SINE,Alu
chr1	16889423	G	C	6.92544E-07	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr6	72012435	A	G	0.00723	OGFRL1	+	FALSE	AluSg	SINE,Alu
chr1	144931727	G	A	0.00521	NBPF20,PDE4DIP	+,-	FALSE
chr11	65544381	T	C	0.00433	AP5B1	-	TRUE	AluJb	SINE,Alu
chr1	10518797	T	C	0.00421		.	FALSE	AluSx1	SINE,Alu
chr20	43707842	A	G	0.00100	STK4	+	TRUE	AluJb	SINE,Alu
chr1	68940885	G	A	0.00022	DEPDC1	-	FALSE	MIR	SINE,Alu
chr1	33148216	A	G	0.00036	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr16	15794023	A	G	4.91052E-06	NDE1	+	TRUE	AluSz6	SINE,Alu
chr1	17287301	A	G	0.00104	CROCC	+	FALSE
chr2	128601583	T	C	0.00550		.	FALSE	AluJr	SINE,Alu
chr2	99813020	A	G	0.00015	MRPL30	+	TRUE	AluJb	SINE,Alu
chr2	206862015	G	A	0.00026	INO80D	-	FALSE
chr2	242384528	G	T	2.14488E-07	FARP2	+	FALSE	AluJr	SINE,Alu
chr19	48753070	T	C	0.00214	CARD8	-	TRUE
chr6	42855972	A	G	0.00182	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	118502750	T	C	0.00922	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr8	128944721	G	T	0.00074	PVT1	+	FALSE
chr5	95236459	C	T	0.00330	ELL2	-	FALSE
chr8	41401497	A	G	0.00051	LOC102723729,GINS4	+,-	FALSE	AluSq2	SINE,Alu
chr1	145513112	A	G	0.00098	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr6	132617374	C	G	0.00062	MOXD1	-	FALSE
chr3	37031951	G	A	0.00154	EPM2AIP1	-	FALSE	(A)n	SINE,Alu
chr1	58999651	T	G	0.00980	OMA1	-	FALSE
chr7	2473761	T	C	0.00126	CHST12	+	FALSE	(CCGC)n	SINE,Alu
chr12	133298025	A	G	6.18330E-06	PGAM5	+	TRUE	AluJo	SINE,Alu
chr2	160084473	A	C	0.00101	TANC1	+	FALSE
chr11	75116734	C	A	0.00453	RPS3	+	FALSE
chr7	65844562	T	C	0.00695	LINC00174	-	FALSE
chr15	91044381	C	A	0.00440	IQGAP1	+	FALSE
chr5	89820984	T	C	0.00921	LYSMD3	-	FALSE
chr1	138156	G	T	0.00177	LOC729737	-	FALSE
chr1	54493197	T	C	0.00489	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr1	184761365	A	G	0.00758	FAM129A	-	FALSE	AluJo	SINE,Alu
chr1	242012149	C	T	0.00510	EXO1	+	FALSE
chr3	4403537	C	T	0.00055	SUMF1	-	FALSE	MIR3	SINE,Alu
chr1	16933749	A	G	0.00764	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr19	56090351	C	T	1.52943E-09	ZNF579	-	FALSE
chr1	94342564	C	A	0.00098	DNTTIP2	-	FALSE
chr1	160112392	G	A	0.00701	ATP1A2	+	FALSE	AluSx3	SINE,Alu
chr2	132275343	G	T	0.00334	LOC150776	+	FALSE
chr1	209605643	A	C	0.00590	MIR205HG	+	FALSE	(AGC)n	SINE,Alu
chr14	23441536	G	A	0.00793	AJUBA	-	FALSE	GA-rich	SINE,Alu
chr7	55433880	G	C	0.00778	LANCL2	+	FALSE
chr4	17803604	T	C	0.00206	DCAF16	-	TRUE	AluY	SINE,Alu
chr11	63724398	T	C	0.00664	NAA40	+	FALSE	AluSx	SINE,Alu
chr1	21100779	T	C	0.00086	HP1BP3	-	TRUE	AluJr	SINE,Alu
chr1	1595031	T	C	0.00103	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	28608338	A	G	0.00341	SESN2	+	FALSE
chr2	206983255	T	C	0.00246		.	FALSE	AluJb	SINE,Alu
chr1	26801731	G	T	0.00325	HMGN2	+	FALSE	(T)n	SINE,Alu
chr3	160968914	T	C	0.00305	NMD3	+	FALSE
chr1	19578192	G	A	0.00246	MRTO4	+	FALSE
chr4	2940164	T	C	0.00115	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr2	73460316	G	T	0.00368	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr2	73339708	G	A	0.00991	RAB11FIP5	-	FALSE
chr1	43394612	T	C	0.00154	SLC2A1	-	FALSE
chr7	44842429	T	G	0.00384	PPIA	+	FALSE
chr1	118409491	A	T	0.00471	GDAP2	-	FALSE	(A)n	SINE,Alu
chr1	19542455	T	C	0.00506	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	36067760	T	C	0.00032	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	105883650	T	G	0.00086	TGFBRAP1	-	FALSE
chr7	30536611	T	C	0.00421	GGCT	-	FALSE
chr1	120163518	C	T	0.00067	ZNF697	-	FALSE
chr1	200558363	T	C	1.35174E-05	KIF14	-	FALSE
chr16	75479468	T	C	0.00250	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	16112795	A	G	0.00499	FBLIM1	+	FALSE
chr2	38971635	C	G	0.00011	SRSF7	-	FALSE
chr2	86364710	T	C	0.00056	PTCD3	+	FALSE
chr1	52375677	T	C	0.00542	RAB3B	-	FALSE	MIRb	SINE,Alu
chr1	10517525	T	C	0.00775		.	FALSE	AluSx1	SINE,Alu
chr1	46077268	A	G	0.00012	NASP	+	TRUE	AluSc8	SINE,Alu
chr1	19543356	T	C	0.00110	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr7	7918285	G	A	0.00255	UMAD1	+	FALSE
chr3	196230564	G	C	0.00842	RNF168	-	FALSE

RBP	WDR5
Knock-Method	shRNA
RBP Family	eIF2A
Biosample Name	PDXs
Tissue Type	Breast
Biosample Type	Cell line
# of Control	3
# of Treat	3
Species	Human
Data Source	GEO
Profile ID	GSE113288
Platform	GPL9115
Pubmed ID	31752957

WDR5 - Target Gene Network