RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	204524950	A	G	4.72439E-07	MDM4	+	TRUE	AluSx	SINE,Alu
chr5	118174745	T	C	0.00084	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	110604747	G	A	0.00101	ALX3	-	FALSE
chr3	10193358	A	G	0.00765	VHL	+	TRUE	L1ME4a	SINE,Alu
chr3	141668922	T	C	0.00937	TFDP2	-	TRUE	AluSz	SINE,Alu
chr5	79279310	T	A	0.00167	MTX3	-	FALSE
chr5	178508569	C	T	0.00571	ZNF354C	+	FALSE
chr2	203426264	C	T	0.00948	BMPR2	+	FALSE
chr1	19984098	C	G	0.00826	MINOS1-NBL1,NBL1	+	FALSE
chr16	10623660	T	C	0.00074	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	224517842	C	T	0.00014	NVL	-	FALSE
chr2	192555178	C	T	0.00112	LOC105747689	+	FALSE
chr3	197611048	A	G	0.00064		.	FALSE	AluSx1	SINE,Alu
chr1	154455949	T	C	0.00416	SHE	-	FALSE
chr5	78532658	C	T	0.00882	JMY	+	FALSE
chr1	86046472	G	T	0.00409	CYR61	+	FALSE
chr11	28134974	C	A	0.00479	METTL15	+	FALSE
chr4	120219239	T	A	0.00707	C4orf3	-	FALSE
chr1	148561089	T	C	0.00011	NBPF15	+	FALSE
chr12	10311392	T	C	0.00177	OLR1	-	FALSE
chr16	2882267	G	C	0.00252	ZG16B	+	FALSE
chr1	33086758	T	C	0.00818		.	FALSE	AluY	SINE,Alu
chr1	100489835	A	G	0.00043	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr2	98272734	A	G	0.00996	ACTR1B	-	FALSE
chr6	74133990	T	C	0.00201		.	FALSE	AluY	SINE,Alu
chr10	63852210	C	T	0.00324	ARID5B	+	FALSE
chr4	57326186	A	G	0.00203	PAICS	+	TRUE	AluJr	SINE,Alu
chr17	65334856	T	C	1.38810E-06	PSMD12	-	TRUE	AluSq	SINE,Alu
chr4	106767318	A	G	1.71247E-06	GSTCD	+	TRUE	AluJb	SINE,Alu
chr6	42857031	A	G	0.00022	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr2	37331025	T	C	0.00055		.	FALSE	AluSx1	SINE,Alu
chr4	126849	A	G	0.00018	ZNF718	+	TRUE	AluSc	SINE,Alu
chr7	12250939	G	A	0.00537	TMEM106B	+	FALSE
chr1	20826786	T	A	0.00030	MUL1	-	FALSE
chr1	27204437	T	C	0.00319		.	FALSE	AluSg7	SINE,Alu
chr1	33149443	A	G	6.55200E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	1593828	G	C	0.00348	CDK11B,SLC35E2B	-	FALSE
chr7	158719116	A	G	0.00824	WDR60	+	FALSE
chr1	179042555	A	G	0.00922	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	68167532	A	C	0.00916	GNG12	-	FALSE
chr1	193058937	C	T	0.00195	TROVE2	+	FALSE	AluSc	SINE,Alu
chr1	165631670	T	G	0.00197	ALDH9A1	-	FALSE
chr10	61548859	A	C	0.00011	CCDC6	-	FALSE
chr3	45721989	A	G	0.00713	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr2	232319610	A	T	0.00029	NCL	-	FALSE
chr14	19686228	C	T	0.00106	DUXAP10	+	FALSE
chr1	23636452	A	G	0.00294	HNRNPR	-	FALSE
chr3	33909611	C	T	0.00598	PDCD6IP	+	FALSE
chr1	19633555	G	A	0.00219	AKR7A2	-	FALSE
chr1	16929056	C	T	0.00398	NBPF1	-	FALSE
chr1	93803490	T	C	0.00572	CCDC18-AS1	-	FALSE	AluJr	SINE,Alu
chr12	133635613	T	C	0.00805		.	FALSE
chr17	73885274	T	C	0.00143	TRIM65	-	TRUE	AluSg	SINE,Alu
chr1	19810692	A	C	0.00069	CAPZB	-	FALSE
chr3	69026314	G	A	0.00881	EOGT	-	FALSE	AluSz6	SINE,Alu
chr4	57326329	A	G	0.00077	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	144922583	G	A	0.00101	NBPF20,PDE4DIP	+,-	FALSE
chr1	204525649	A	G	0.00191	MDM4	+	TRUE	AluSz	SINE,Alu
chr6	108363821	T	C	0.00769	OSTM1	-	TRUE	AluJb	SINE,Alu
chr16	75480021	T	C	0.00270	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr2	24494638	T	G	0.00495	ITSN2	-	FALSE	(TATCCT)n	SINE,Alu
chr12	125512218	A	G	0.00392		.	FALSE	AluSx1	SINE,Alu
chr1	87573325	C	T	0.00121	HS2ST1	+	FALSE	(AT)n	SINE,Alu
chr4	25236017	T	C	2.76644E-09	PI4K2B	+	FALSE
chr15	90819579	A	G	0.00933		.	FALSE	AluSx	SINE,Alu
chr1	3697550	C	A	0.00078	LRRC47	-	FALSE	AluSc	SINE,Alu
chr1	114307293	A	G	0.00499	RSBN1	-	FALSE
chr1	2160988	G	A	0.00137	SKI	+	FALSE
chr2	27466552	G	C	0.00396	CAD	+	FALSE
chr2	37330540	T	C	0.00854		.	FALSE	AluSq2	SINE,Alu
chr1	16933658	G	A	0.00699	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr6	13790931	T	C	0.00948	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr1	229730452	G	A	0.00236	TAF5L	-	FALSE
chr7	100804140	C	T	0.00377	AP1S1	+	FALSE
chr1	28662253	A	G	0.00187	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	19934793	G	A	0.00068	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr3	41281407	G	T	0.00011	CTNNB1	+	FALSE
chr1	145513016	A	G	0.00400	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	91990450	A	T	0.00405	CDC7	+	FALSE	LFSINE_Vert	SINE,Alu
chr5	130537223	A	G	0.00044	LYRM7	+	TRUE	AluSp	SINE,Alu
chr3	12624321	A	G	2.86985E-06	MKRN2	+	FALSE
chr1	9331101	A	G	3.95613E-06	H6PD	+	FALSE	AluSx	SINE,Alu
chr1	21780000	G	T	0.00153	NBPF3	+	FALSE	ERVL-E-int	SINE,Alu
chr1	146650542	A	G	0.00017	PDIA3P1	+	FALSE
chr2	30748507	C	T	0.00103	LCLAT1	+	FALSE
chr5	43527402	T	C	0.00539	PAIP1	-	FALSE
chr5	25415881	T	C	0.00911		.	FALSE
chr1	26755229	A	G	0.00318	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr1	110949720	C	T	0.00666	LAMTOR5	-	FALSE	L1ME4b	SINE,Alu
chr11	76733943	A	G	0.00925	ACER3	+	FALSE	A-rich	SINE,Alu
chr3	125248855	C	A	0.00071	OSBPL11	-	FALSE
chr4	17802956	T	C	0.00351	DCAF16	-	TRUE	AluSz	SINE,Alu
chr13	111111173	G	A	0.00224	COL4A2,COL4A2-AS2	+,-	FALSE
chr1	168218522	A	G	0.00153		.	FALSE	AluSz	SINE,Alu
chr7	5567112	C	T	0.00000	ACTB	-	FALSE
chr2	178406764	C	T	0.00416	AGPS	+	FALSE
chr2	96850885	T	C	0.00699	STARD7	-	FALSE
chr2	37331750	T	C	0.00067		.	FALSE	AluJb	SINE,Alu
chr2	99812447	A	G	0.00525	MRPL30	+	TRUE	AluSx	SINE,Alu
chr6	83921257	G	T	0.00876	ME1	-	FALSE
chr1	19543353	T	C	0.00081	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	44443175	A	C	0.00026	ATP6V0B	+	FALSE
chr1	87811249	T	A	0.00653	LMO4	+	FALSE
chr1	47716046	A	T	0.00696	STIL	-	FALSE
chr1	87573331	T	C	0.00699	HS2ST1	+	FALSE	(AT)n	SINE,Alu
chr1	149913726	T	C	8.62683E-05	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr8	25222165	A	G	0.00019	DOCK5	+	FALSE
chr12	1086062	G	T	0.00847	RAD52	-	FALSE	L2	SINE,Alu
chr4	66439443	T	C	0.00593	EPHA5	-	FALSE
chr10	114209912	A	G	0.00060	VTI1A	+	TRUE	AluSx3	SINE,Alu
chr2	61277384	A	G	0.00339	PEX13	+	TRUE	AluSx	SINE,Alu
chr12	64842920	A	G	2.84792E-05		.	FALSE	AluSz	SINE,Alu
chr2	161130867	C	A	0.00034	RBMS1	-	FALSE
chr1	94335332	G	T	0.00973	DNTTIP2	-	FALSE
chr1	9161218	T	C	0.00641		.	FALSE	AluSx	SINE,Alu
chr3	30047174	A	T	0.00556	RBMS3	+	FALSE
chr2	206981874	T	C	0.00060		.	FALSE	AluJb	SINE,Alu
chr1	1251844	T	C	0.00731	CPSF3L	-	TRUE	AluSq2	SINE,Alu
chr1	150208462	A	C	9.89925E-05	ANP32E	-	FALSE
chr16	4810507	G	A	0.00021	ZNF500	-	FALSE
chr1	67874252	C	A	0.00558	SERBP1	-	FALSE
chr14	95572111	A	C	0.00409	DICER1	-	FALSE
chr1	153643449	G	C	0.00704	ILF2	-	FALSE
chr2	202031433	A	G	0.00611	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr1	24295888	T	A	0.00240		.	FALSE
chr1	197093361	G	A	8.55632E-06	ASPM	-	FALSE
chr7	99636947	A	G	0.00851	ZKSCAN1	+	FALSE	AluSx1	SINE,Alu
chr17	1946503	C	G	0.00154	DPH1,OVCA2	+	FALSE
chr1	16912015	G	A	0.00092	NBPF1	-	FALSE
chr1	220231959	T	C	0.00028	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	10519982	T	C	0.00129		.	FALSE	AluJr	SINE,Alu
chr3	156258319	T	C	0.00909	SSR3	-	TRUE	AluYk3	SINE,Alu
chr2	232319613	C	T	0.00022	NCL	-	FALSE
chr1	236748403	G	C	0.00519	HEATR1	-	FALSE
chr5	132232315	G	A	0.00573	AFF4	-	FALSE
chr15	23282589	A	G	0.00291	HERC2P2	-	FALSE
chr17	25640295	T	A	0.00154	WSB1	+	FALSE
chr5	180682610	T	C	0.00014	CTC-338M12.4	+	FALSE
chr1	10521130	T	C	0.00807	DFFA	-	TRUE	AluY	SINE,Alu
chr1	10518591	A	T	0.00545		.	FALSE
chrX	118672561	T	C	2.49155E-08	CXorf56	-	TRUE	AluSx	SINE,Alu
chr8	37613073	A	C	0.00394	ERLIN2	+	FALSE	(CCCCCAC)n	SINE,Alu
chr3	99517485	C	A	0.00088	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr1	50883798	T	C	0.00156	DMRTA2	-	FALSE
chr12	92537702	T	A	0.00368	BTG1	-	FALSE
chr2	75120159	C	T	0.00180	HK2	+	FALSE
chr2	203744629	T	C	0.00363		.	FALSE	AluSx1	SINE,Alu
chr6	149912555	G	A	0.00551		.	FALSE
chr7	44800040	C	A	0.00565	ZMIZ2	+	FALSE
chr4	1205667	A	C	0.00990	CTBP1-AS,CTBP1	+,-	FALSE	(A)n	SINE,Alu
chr2	11053740	C	T	0.00402	KCNF1	+	FALSE
chr19	21367088	A	G	0.00018	ZNF431	+	TRUE	AluSc	SINE,Alu
chr1	6582176	T	C	0.00694	NOL9	-	TRUE	AluSq4	SINE,Alu
chr1	120611964	G	C	0.00211	NOTCH2	-	FALSE
chr15	42859922	A	G	0.00731	HAUS2	+	TRUE	AluSx1	SINE,Alu
chr15	39879717	G	A	0.00162	THBS1	+	FALSE
chr3	126755556	C	T	0.00303	PLXNA1	+	FALSE
chr22	18571345	A	G	0.00113	PEX26	+	TRUE	AluSz	SINE,Alu
chr6	42855200	A	G	2.13337E-05	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr17	65335362	T	C	3.02375E-05	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	158067060	T	A	0.00114	KIRREL	+	FALSE
chr1	46828653	T	A	0.00920	NSUN4	+	FALSE
chr1	11119935	G	T	2.46542E-05	SRM	-	FALSE
chr1	1607574	C	T	0.00187	CDK11B,SLC35E2B	-	FALSE
chr1	201975173	G	T	0.00053	RNPEP	+	FALSE
chr2	206986291	T	C	0.00143		.	FALSE	AluSz	SINE,Alu
chr1	64097432	C	T	0.00157	PGM1	+	FALSE
chr15	90819418	A	G	0.00516		.	FALSE	AluSx	SINE,Alu
chr1	9162223	T	C	0.00586		.	FALSE	AluSx	SINE,Alu
chr1	6582761	T	C	0.00052	NOL9	-	FALSE	AluSg	SINE,Alu
chr1	28567501	A	G	0.00887		.	FALSE
chr1	1650845	G	A	0.00094	CDK11B,CDK11A	-	FALSE
chr1	52306079	T	A	0.00033	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr1	24935337	A	G	0.00773	NCMAP	+	TRUE	AluJb	SINE,Alu
chr7	91502407	C	G	0.00183	MTERF1	-	FALSE
chr1	109475629	A	G	0.00315	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr4	84525986	G	T	0.00081	GPAT3	+	FALSE	(TTGTT)n	SINE,Alu
chr1	35899684	C	T	0.00051	KIAA0319L	-	FALSE	AluSc8	SINE,Alu
chr1	10517653	T	C	1.73226E-05		.	FALSE	AluSx1	SINE,Alu
chr2	10586903	A	C	0.00041	ODC1,SNORA80B	-	FALSE
chr1	45976259	A	C	0.00015	MMACHC	+	FALSE
chr1	31905882	A	C	0.00132	SERINC2	+	FALSE
chr5	125962169	A	G	0.00013	PHAX	+	TRUE	AluSc	SINE,Alu
chr3	121382204	C	T	0.00309	GOLGB1	-	FALSE
chr3	181430454	G	A	0.00577	SOX2-OT,SOX2	+	FALSE
chr1	93828523	T	A	0.00155		.	FALSE
chr3	45636213	C	G	0.00240		.	FALSE
chr4	10076860	G	A	1.69987E-09	WDR1	-	FALSE
chr1	150704483	T	C	0.00028	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	193055149	A	G	0.00340	TROVE2	+	FALSE
chr8	1730491	A	G	5.38446E-06	CLN8	+	TRUE	AluSx1	SINE,Alu
chr2	162165008	A	T	0.00539	PSMD14	+	FALSE
chr3	100083427	T	A	0.00456	TOMM70	-	FALSE	FAM	SINE,Alu
chr1	205687351	T	C	2.02150E-05	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	43629979	G	T	0.00470	EBNA1BP2	-	FALSE
chr6	31657413	T	C	0.00066		.	FALSE
chr16	46831408	T	C	0.00852		.	FALSE	AluSz	SINE,Alu
chr1	121133770	A	G	0.00295	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	182568729	C	G	0.00012	RGS16	-	FALSE
chr2	24494671	T	C	0.00244	ITSN2	-	FALSE	(TATCCT)n	SINE,Alu
chr1	54565296	A	G	0.00623	TCEANC2	+	TRUE	AluSx1	SINE,Alu
chr1	6283296	T	C	0.00122	ICMT	-	TRUE	AluSx3	SINE,Alu
chr7	44917320	T	C	0.00082	PURB	-	TRUE	AluSz	SINE,Alu
chr1	59124223	G	A	0.00327	MYSM1	-	FALSE	MIR3	SINE,Alu
chr1	94351062	T	A	0.00676	GCLM	-	FALSE
chr1	16934178	C	T	0.00382	NBPF1	-	FALSE
chrX	77083614	T	C	6.82446E-05	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr4	6676407	G	C	0.00178	LOC93622	+	FALSE
chr1	220231963	T	C	0.00343	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	10517352	T	C	0.00311		.	FALSE	AluJr	SINE,Alu
chr1	201845899	G	T	1.72907E-05	IPO9	+	FALSE
chr1	154987526	C	T	0.00218	ZBTB7B	+	FALSE
chr1	11721832	C	G	0.00514	FBXO44	+	FALSE
chr4	124237124	A	G	0.00119	SPATA5	+	TRUE	AluJr	SINE,Alu
chr2	101622700	A	G	0.00387	RPL31	+	FALSE
chr3	191110544	T	G	0.00031	CCDC50	+	FALSE	AluSz	SINE,Alu
chr1	6583457	T	C	0.00075	NOL9	-	TRUE	AluSq	SINE,Alu
chr2	37328012	T	C	6.47624E-05		.	FALSE
chr1	145509493	A	G	0.00264	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	214529302	C	T	0.00331	PTPN14	-	FALSE	AluJb	SINE,Alu
chr1	10518613	A	T	0.00819		.	FALSE	AluSx1	SINE,Alu
chr6	44222156	A	T	0.00856	SLC35B2	-	FALSE
chr1	28826085	A	G	0.00153	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr2	227597207	T	C	0.00209	IRS1	-	FALSE	(TA)n	SINE,Alu
chr15	42824348	A	G	0.00685	SNAP23	+	TRUE	AluSg	SINE,Alu
chr5	37291386	T	C	1.33550E-08		.	FALSE	AluSx3	SINE,Alu
chr1	10520378	T	C	0.00743		.	FALSE	AluSx1	SINE,Alu
chr3	124686323	A	T	0.00146	HEG1	-	FALSE
chr1	40219280	T	C	0.00169	PPIE	+	FALSE
chr1	17393260	T	C	0.00094	PADI2	-	FALSE
chr1	6282383	T	C	0.00130	ICMT	-	TRUE	AluSz	SINE,Alu
chr7	137612915	G	A	0.00057	CREB3L2	-	FALSE
chr1	161932324	A	G	0.00356	ATF6	+	FALSE
chr1	7980667	T	C	0.00584	TNFRSF9	-	TRUE	AluJb	SINE,Alu
chr10	94414146	A	G	0.00911	KIF11	+	FALSE
chr7	6695426	G	T	0.00893	ZNF316	+	FALSE
chr2	54896395	A	C	0.00051	SPTBN1	+	FALSE
chr4	3213832	G	A	0.00012	HTT	+	FALSE
chr1	25688276	A	G	0.00015	TMEM50A	+	FALSE
chr1	46075715	A	G	0.00058	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	179044100	A	G	0.00487	FAM20B	+	TRUE	AluSx	SINE,Alu
chr10	101992810	T	C	0.00149	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr3	183898428	T	G	0.00611	AP2M1	+	FALSE
chr1	10517613	T	C	0.00499		.	FALSE	AluSx1	SINE,Alu
chr16	67715404	T	C	0.00102	GFOD2	-	TRUE	AluSz	SINE,Alu
chr7	128143289	A	G	0.00082		.	FALSE	AluSc8	SINE,Alu
chr1	75230606	C	T	0.00077	TYW3	+	FALSE
chr6	151678865	T	G	0.00016	AKAP12	+	FALSE	(T)n	SINE,Alu
chr7	6442891	G	A	0.00134	RAC1	+	FALSE
chr1	28865500	T	A	0.00509	RCC1	+	FALSE
chr7	102089261	A	G	0.00028	ORAI2	+	TRUE	AluSq2	SINE,Alu
chr1	180082720	G	A	0.00577	CEP350	+	FALSE
chr2	217366933	C	T	2.15691E-05		.	FALSE	AluSz6	SINE,Alu
chr1	244572644	G	C	0.00033	ADSS	-	FALSE
chr8	42884422	A	G	0.00768	HOOK3	+	TRUE	AluSc	SINE,Alu
chr1	145281408	C	T	9.69497E-05	NBPF20,NOTCH2NL	+	FALSE
chr1	327407	A	G	3.55459E-07		.	FALSE
chr1	20238574	C	T	6.32696E-05	OTUD3	+	FALSE
chr7	75958149	A	C	0.00050	YWHAG	-	FALSE
chr1	16912099	G	C	0.00450	NBPF1	-	FALSE
chr14	75202963	A	G	2.20276E-06	FCF1	+	TRUE	AluSx	SINE,Alu
chr1	16890130	A	C	0.00594	NBPF1	-	FALSE
chr7	115898442	G	C	2.36867E-05	TES	+	FALSE	AluSx	SINE,Alu
chr5	37291617	T	C	0.00022		.	FALSE	AluSx3	SINE,Alu
chr1	93298516	A	G	0.00493	FAM69A,RPL5	+,-	FALSE
chr1	9163402	T	C	4.95479E-05		.	FALSE	AluSp	SINE,Alu
chr2	206986245	T	C	0.00979		.	FALSE	AluSz	SINE,Alu
chr1	101444796	C	T	0.00453	SLC30A7	+	FALSE
chr1	44818525	T	C	0.00442	ERI3	-	FALSE
chr1	114938105	T	A	0.00430	TRIM33	-	FALSE
chr1	28835937	A	G	0.00121	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	3729217	T	C	0.00030	CEP104	-	TRUE	AluSx3	SINE,Alu
chr4	39550978	T	C	0.00558	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr2	33046027	G	C	0.00397	TTC27	+	FALSE
chr12	102517753	T	C	0.00022	PARPBP	+	FALSE
chr1	26801731	G	T	0.00325	HMGN2	+	FALSE	(T)n	SINE,Alu
chr3	119545349	T	C	0.00805	GSK3B	-	FALSE
chr1	54571380	A	G	0.00332	TCEANC2	+	TRUE	AluSc	SINE,Alu
chr1	36529575	A	G	2.40551E-05		.	FALSE	AluJr	SINE,Alu
chr2	191799592	A	G	0.00010	GLS	+	TRUE
chr11	63394016	T	C	0.00106	ATL3	-	FALSE
chr13	50102992	T	C	0.00956	SETDB2-PHF11,PHF11	+	FALSE	L2a	SINE,Alu
chr1	28929961	T	A	0.00068	TAF12	-	FALSE
chr19	11560461	A	G	0.00034	PRKCSH	+	TRUE	AluSx	SINE,Alu
chr9	132900076	T	C	5.65714E-05	GPR107	+	FALSE
chr2	240954005	C	A	0.00021	NDUFA10	-	FALSE
chr1	1650807	T	C	0.00104	CDK11B,CDK11A	-	FALSE
chr1	6651728	C	T	0.00118	KLHL21	-	FALSE
chr12	98943182	A	G	1.41026E-08	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	58999651	T	G	0.00484	OMA1	-	FALSE
chr3	136573440	A	G	0.00038	NCK1-AS1,SLC35G2	+,-	FALSE
chr1	53289759	A	G	0.00060	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr9	9442082	T	G	0.00052	PTPRD	-	FALSE	7SLRNA	SINE,Alu
chr3	66430374	A	T	0.00275	LRIG1	-	FALSE
chr1	26608009	T	A	0.00496	SH3BGRL3	+	FALSE
chr1	36068052	G	T	1.69686E-12	PSMB2	-	FALSE	L1ME4b	SINE,Alu
chr3	15114493	T	C	2.42944E-10	RBSN	-	TRUE	AluY	SINE,Alu
chr1	204524914	A	G	0.00766	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	8413839	A	G	0.00776	RERE	-	FALSE
chr4	57326315	A	G	0.00025	PAICS	+	TRUE	AluJr	SINE,Alu
chr2	99812988	A	G	0.00793	MRPL30	+	TRUE	AluJb	SINE,Alu
chr18	47919174	A	G	0.00820	SKA1	+	TRUE	AluYk4	SINE,Alu
chr16	10623558	T	C	0.00103	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	10517290	T	C	0.00119		.	FALSE	AluJr	SINE,Alu
chr2	37331221	T	C	1.68149E-05		.	FALSE	AluSx1	SINE,Alu
chr17	38974612	T	C	0.00963	KRT10	-	FALSE
chr1	186390303	A	C	0.00455	C1orf27	+	FALSE	L1ME3F	SINE,Alu
chr5	141691255	C	A	0.00323	SPRY4	-	FALSE
chr7	65618249	A	G	0.00785	CRCP	+	TRUE	AluSp	SINE,Alu
chr1	17734207	G	A	0.00020	RCC2	-	FALSE
chr1	36602176	G	T	0.00017	TRAPPC3	-	FALSE
chr1	19542456	T	C	0.00135	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu

RBP	WDR5
Knock-Method	shRNA
RBP Family	eIF2A
Biosample Name	PDXs
Tissue Type	Breast
Biosample Type	Cell line
# of Control	3
# of Treat	3
Species	Human
Data Source	GEO
Profile ID	GSE113288
Platform	GPL9115
Pubmed ID	31752957

WDR5 - Target Gene Network