RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	17298138	A	T	0.00465	CROCC	+	FALSE
chr17	49041827	T	C	0.00125	SPAG9	-	TRUE	AluSx	SINE,Alu
chr11	118947634	C	T	0.00276	VPS11	+	FALSE
chr1	19953120	G	A	0.00197	MINOS1,MINOS1-NBL1	+	FALSE
chr1	144852203	T	G	0.00029	NBPF20,PDE4DIP	+,-	FALSE
chr1	17766126	A	G	0.00017	RCC2	-	FALSE
chr16	81064494	A	G	8.13539E-06	CENPN	+	TRUE	AluSg	SINE,Alu
chr3	42610515	G	A	0.00099	SEC22C	-	FALSE
chr2	178406768	T	A	0.00416	AGPS	+	FALSE
chr2	20648145	A	C	3.92667E-06	RHOB	+	FALSE
chr1	201845903	A	G	0.00041	IPO9	+	FALSE
chr2	37331555	T	C	0.00171		.	FALSE	AluJb	SINE,Alu
chr1	120162787	T	C	0.00925	ZNF697	-	FALSE
chr2	109401285	G	A	0.00087	RANBP2	+	FALSE
chr2	99813003	A	G	0.00046	MRPL30	+	TRUE	AluJb	SINE,Alu
chr3	52027636	C	T	0.00965		.	FALSE
chr14	36784095	C	T	0.00866	MBIP	-	FALSE
chr3	20025677	G	T	0.00116	RAB5A,PP2D1	+,-	FALSE
chr20	35521049	G	A	0.00711	TLDC2,SAMHD1	+,-	FALSE
chr20	43706946	A	G	0.00434	STK4	+	TRUE	AluSx4	SINE,Alu
chr3	14986399	T	C	1.19850E-05	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	160231910	A	T	0.00051	DCAF8	-	FALSE
chr6	111588769	A	G	2.24603E-05	MFSD4B	+	TRUE	AluYm1	SINE,Alu
chr1	53291382	A	G	0.00691	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr3	148748380	T	C	0.00240	HLTF	-	FALSE
chr1	179876988	C	G	0.00045	TOR1AIP1	+	FALSE
chr2	173461888	A	G	0.00110	PDK1	+	TRUE	AluJr	SINE,Alu
chr2	37327662	T	C	0.00220		.	FALSE
chr1	19586501	A	G	0.00288	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	174086933	C	A	0.00457	ZAK,MLK7-AS1	+,-	FALSE	AluJo	SINE,Alu
chr3	194789663	T	C	0.00754	XXYLT1	-	FALSE	MARNA	SINE,Alu
chr1	201488170	A	G	0.00997		.	FALSE	AluSz	SINE,Alu
chr1	144930596	C	A	0.00103	NBPF20,PDE4DIP	+,-	FALSE
chr6	114178850	G	C	0.00045	MARCKS	+	FALSE	(TGCCGC)n	SINE,Alu
chr1	16890155	C	T	0.00388	NBPF1	-	FALSE
chr6	114181220	A	G	0.00265	MARCKS	+	FALSE
chr16	15794023	A	G	4.91052E-06	NDE1	+	TRUE	AluSz6	SINE,Alu
chr1	206635244	T	A	0.00195	SRGAP2	+	FALSE
chr1	108113839	T	C	1.78857E-05	VAV3	-	FALSE
chr1	28825760	A	G	0.00802	PHACTR4	+	TRUE	AluSp	SINE,Alu
chr1	79110518	A	G	0.00997	IFI44L	+	FALSE
chr5	151041886	T	G	0.00176	SPARC	-	FALSE
chr16	88789703	C	G	0.00498	PIEZO1	-	FALSE
chr1	6282361	T	C	0.00634	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	28662186	A	G	0.00774	MED18	+	TRUE	AluSq2	SINE,Alu
chr14	74526952	T	C	0.00019	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr1	20977599	C	G	0.00489	PINK1,PINK1-AS	+,-	FALSE
chr9	116022893	C	A	0.00060	SLC31A1	+	FALSE
chr5	140594466	G	A	0.00209	PCDHB13	+	FALSE
chr1	142688506	T	C	4.54862E-05		.	FALSE
chr17	8286136	T	A	0.00706	RPL26	-	FALSE
chr5	125961667	A	G	1.34346E-05	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	32687473	T	G	0.00892	TMEM234,EIF3I	+,-	FALSE
chr17	80347528	T	C	0.00048	OGFOD3	-	TRUE	AluJb	SINE,Alu
chr2	215674224	G	A	9.97816E-05	BARD1	-	FALSE
chr1	62628606	A	G	0.00027	PATJ	+	TRUE	AluSg4	SINE,Alu
chr1	150597527	T	C	0.00058	ENSA	-	FALSE
chr1	10519932	T	C	0.00012		.	FALSE	AluJr	SINE,Alu
chr4	185309401	A	G	0.00782	IRF2	-	FALSE
chr4	156273768	T	C	0.00058	MAP9	-	FALSE
chr3	58304244	G	A	0.00560	RPP14	+	FALSE	AluSz	SINE,Alu
chr3	88199298	T	C	0.00112	C3orf38	+	FALSE
chr1	109192051	T	C	0.00124	HENMT1	-	TRUE	AluJr	SINE,Alu
chr3	183900729	T	C	0.00074	AP2M1	+	FALSE	MIR3	SINE,Alu
chr2	175711942	C	T	8.43847E-05	CHN1	-	FALSE
chr2	69746296	C	T	0.00620	AAK1	-	FALSE
chr9	96439041	A	T	0.00751	PHF2	+	FALSE
chr5	64097145	C	G	0.00361	CWC27	+	FALSE
chr1	205738843	C	T	0.00072	RAB29	-	FALSE	AluSz6	SINE,Alu
chr1	160967899	T	C	0.00661	F11R	-	TRUE	AluSp	SINE,Alu
chr1	153533586	T	C	0.00358	S100A2	-	FALSE	Charlie18a	SINE,Alu
chr5	112312528	T	C	0.00827	DCP2	+	FALSE
chr12	49745425	A	G	0.00489	DNAJC22	+	TRUE	AluSx3	SINE,Alu
chr3	194369580	C	A	0.00042	LSG1	-	FALSE
chr10	1086797	A	C	0.00499	IDI2-AS1,IDI1	+,-	FALSE
chr14	53242630	T	C	0.00056	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr1	27107950	G	A	0.00249	ARID1A	+	FALSE
chr3	182637840	C	T	1.61172E-05	ATP11B	+	FALSE
chr1	78414285	T	A	0.00256	FUBP1	-	FALSE
chr19	7116159	G	T	0.00368	INSR	-	FALSE
chr1	955597	G	T	3.81431E-06	AGRN	+	FALSE
chr1	235392546	T	C	0.00312	ARID4B	-	FALSE
chr1	6282236	T	C	0.00388	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	16932368	T	A	0.00336	NBPF1	-	FALSE	MLT1F-int	SINE,Alu
chr2	176042871	A	T	0.00204	ATP5G3	-	FALSE
chr2	206987597	T	C	0.00085		.	FALSE	AluJb	SINE,Alu
chr16	10625101	T	C	0.00804	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	46828700	A	G	0.00805	NSUN4	+	FALSE
chrX	2825114	T	C	0.00738	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	10520099	T	C	0.00152		.	FALSE	AluSx	SINE,Alu
chr5	130729522	T	G	0.00506	CDC42SE2	+	FALSE	(T)n	SINE,Alu
chr1	246829742	T	C	0.00037	CNST	+	FALSE	(TGTG)n	SINE,Alu
chr1	20977856	T	C	0.00232	PINK1,PINK1-AS	+,-	FALSE
chr2	55462744	C	A	0.00033	RPS27A	+	FALSE
chr1	38411445	G	A	0.00625	INPP5B	-	FALSE
chr1	10520725	T	C	0.00234	DFFA	-	TRUE	AluSc8	SINE,Alu
chr15	102516512	G	A	0.00041	WASH3P	+	FALSE
chr1	228675570	G	C	0.00298	RNF187	+	FALSE
chr9	132900076	T	C	5.65714E-05	GPR107	+	FALSE
chr3	196082911	T	C	0.00250	UBXN7	-	FALSE
chr1	67874859	T	C	0.00374	SERBP1	-	TRUE	AluSx	SINE,Alu
chr18	19445881	T	A	0.00224	MIB1	+	FALSE
chr1	67874859	T	C	0.00214	SERBP1	-	TRUE	AluSx	SINE,Alu
chr3	56703746	A	C	0.00017	FAM208A	-	FALSE
chr19	59093997	A	G	0.00047	CENPBD1P1	+	TRUE	AluY	SINE,Alu
chr1	184661942	T	G	0.00343	EDEM3	-	FALSE
chr3	5259480	T	A	5.79324E-05	EDEM1	+	FALSE
chr1	206566948	G	A	0.00228	SRGAP2	+	FALSE
chr14	90509582	T	C	0.00017	TDP1	+	FALSE
chr5	162902516	T	C	0.00226	HMMR	+	FALSE
chr1	204520000	A	G	0.00032	MDM4	+	TRUE	Charlie2a	SINE,Alu
chr3	40503557	T	C	0.00487	RPL14	+	FALSE
chr1	28920925	A	G	0.00294	RAB42	+	TRUE	AluSx	SINE,Alu
chr2	201774775	T	C	0.00872		.	FALSE	AluJr4	SINE,Alu
chr3	195243012	A	C	0.00128	PPP1R2	-	FALSE
chr5	130538076	A	G	0.00045	LYRM7	+	TRUE	AluSp	SINE,Alu
chr1	33960062	A	G	0.00064	ZSCAN20	+	FALSE
chr1	16921146	T	C	0.00353	NBPF1	-	FALSE
chr1	89518120	A	G	0.00453	GBP1	-	FALSE
chr1	36067677	T	C	0.00017	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	155658362	C	T	0.00807		.	FALSE	MIR3	SINE,Alu
chr1	142700116	C	T	0.00081	ANKRD20A12P	-	FALSE
chr3	183898428	T	G	0.00611	AP2M1	+	FALSE
chr17	28513176	G	A	0.00996	NSRP1	+	FALSE	AluJr	SINE,Alu
chr1	16889820	C	T	0.00709	NBPF1	-	FALSE
chr1	6659505	G	A	0.00017	KLHL21	-	FALSE
chr1	1595540	T	C	0.00042	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr1	38275432	G	T	0.00057	MTF1	-	FALSE
chr7	44800040	C	A	0.00565	ZMIZ2	+	FALSE
chr10	126677249	A	T	0.00762	CTBP2	-	FALSE
chr14	75202734	A	G	0.00016	FCF1	+	TRUE	AluSc	SINE,Alu
chr5	174956487	T	C	0.00457	SFXN1	+	FALSE
chr19	13884096	A	G	0.00049	MRI1	+	TRUE	AluSz	SINE,Alu
chr1	52375424	T	C	0.00109	RAB3B	-	FALSE
chr4	17802890	T	C	0.00303	DCAF16	-	TRUE	AluSz	SINE,Alu
chr3	16299968	G	A	0.00470	DPH3	-	FALSE
chr1	168213413	T	C	0.00733		.	FALSE	AluSx1	SINE,Alu
chr1	154323558	A	T	0.00011	ATP8B2	+	FALSE
chr7	6063468	G	A	0.00451	EIF2AK1	-	FALSE
chr1	25663918	G	A	0.00951	RSRP1	-	FALSE
chr1	10367424	G	A	0.00286	KIF1B	+	FALSE	AluSx	SINE,Alu
chr1	10519912	T	C	5.10285E-06		.	FALSE	AluJr	SINE,Alu
chr3	194309210	G	A	0.00317	TMEM44-AS1,TMEM44	+,-	FALSE
chr1	46751578	T	G	0.00380	LRRC41	-	FALSE
chr1	45976259	A	C	0.00015	MMACHC	+	FALSE
chr10	119766673	T	G	0.00082	RAB11FIP2	-	FALSE
chr1	1650797	A	G	0.00798	CDK11B,CDK11A	-	FALSE
chr1	76229185	T	A	0.00280	ACADM	+	FALSE
chr19	42375585	A	G	0.00022		.	FALSE	AluSx	SINE,Alu
chr1	180247476	T	C	0.00890		.	FALSE
chr2	37331531	T	C	0.00148		.	FALSE	AluJb	SINE,Alu
chr16	10623705	T	C	0.00011	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	33086905	T	C	0.00598	ZBTB8OS	-	FALSE	AluY	SINE,Alu
chr3	45636335	A	G	0.00262	LIMD1	+	FALSE	(AC)n	SINE,Alu
chr1	24296708	A	G	0.00512		.	FALSE
chr2	233446265	T	C	0.00177	EIF4E2	+	FALSE
chr8	8750467	A	G	0.00131	MFHAS1	-	FALSE
chr5	96503523	C	T	0.00072	RIOK2	-	FALSE
chr9	33624856	C	T	0.00823	ANXA2P2	+	FALSE
chr2	47129284	A	G	0.00327	MCFD2	-	FALSE
chr1	20976843	G	C	0.00202	PINK1,PINK1-AS	+,-	FALSE
chr1	145291108	A	C	0.00827	NBPF20	+	FALSE
chr3	181430508	G	A	3.55222E-06	SOX2-OT,SOX2	+	FALSE
chr3	44791569	T	C	0.00685	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	27205214	T	C	0.00048		.	FALSE	AluSc	SINE,Alu
chr17	7124772	G	A	0.00175	ACADVL	+	FALSE
chrX	102613351	A	G	0.00969	TCEAL9	+	FALSE	L1ME4a	SINE,Alu
chr1	28836912	A	G	3.63020E-05	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr7	44918732	T	C	0.00039	PURB	-	FALSE	AluSg	SINE,Alu
chr8	30536603	T	C	9.61612E-06	GSR	-	TRUE	AluSp	SINE,Alu
chr16	80636297	C	G	0.00161	CDYL2	-	FALSE
chr2	3592615	T	C	0.00331	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr1	109865630	C	T	0.00647	SORT1	-	FALSE
chr3	167727417	C	T	2.31470E-08	GOLIM4	-	FALSE
chr1	16889502	T	C	0.00178	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr2	176791183	T	C	0.00252	LNPK	-	TRUE	MSTD	SINE,Alu
chr9	34088028	T	C	0.00854	DCAF12	-	FALSE
chr1	54692331	T	C	0.00549	SSBP3	-	FALSE	(T)n	SINE,Alu
chr2	188330323	T	G	0.00162	TFPI	-	FALSE	L2	SINE,Alu
chr1	10517306	T	C	0.00102		.	FALSE	AluJr	SINE,Alu
chr1	35817022	T	A	0.00072	ZMYM4	+	FALSE
chr1	28825331	A	G	1.84239E-05	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	179326847	A	G	0.00031	SOAT1	+	TRUE	AluJo	SINE,Alu
chr2	69688917	T	C	0.00254	AAK1	-	TRUE	AluSq2	SINE,Alu
chr2	105964472	C	T	0.00398	C2orf49	+	FALSE	(TTTCTCC)n	SINE,Alu
chr14	63841402	A	C	0.00692	PPP2R5E	-	FALSE
chr17	19091395	C	T	0.00852		.	FALSE	U3	SINE,Alu
chr1	64097432	C	T	0.00157	PGM1	+	FALSE
chr19	51305796	T	C	0.00212	C19orf48	-	TRUE	AluSg	SINE,Alu
chr1	247350690	G	C	0.00364		.	FALSE	L1MA7	SINE,Alu
chr1	10519932	T	C	0.00323		.	FALSE	AluJr	SINE,Alu
chr1	171561203	T	G	0.00119	PRRC2C	+	FALSE
chr1	179044100	A	G	0.00487	FAM20B	+	TRUE	AluSx	SINE,Alu
chr4	3770069	G	C	0.00018	ADRA2C	+	FALSE
chr3	195963397	G	A	0.00037		.	FALSE
chr1	93827990	C	A	0.00517	DR1	+	FALSE
chr3	10193475	A	G	0.00295	VHL	+	TRUE	AluJr	SINE,Alu
chr1	203839215	T	A	0.00692	SNRPE	+	FALSE
chr1	27248275	C	T	0.00047	NUDC	+	FALSE
chr1	16958063	C	T	0.00246		.	FALSE
chr6	42855200	A	G	2.13337E-05	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	36067752	T	C	0.00123	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	156011444	T	C	0.00483	UBQLN4	-	FALSE
chr1	180943529	C	T	0.00297	STX6	-	FALSE
chr1	36067760	T	C	0.00203	PSMB2	-	TRUE	AluSz	SINE,Alu
chr9	21331119	C	T	0.00343	KLHL9	-	FALSE	L1M	SINE,Alu
chr1	46075663	A	G	0.00013	NASP	+	TRUE	AluSx4	SINE,Alu
chr15	65442546	T	C	0.00564	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	100657416	C	T	0.00058	DBT	-	FALSE	AluJb	SINE,Alu
chr1	6583701	T	C	0.00029	NOL9	-	FALSE
chr1	26603883	G	A	0.00660	CEP85	+	FALSE
chr1	35319605	A	C	0.00226	SMIM12	-	FALSE	AluSg	SINE,Alu
chr6	42857111	A	G	0.00681	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr2	206982358	T	C	0.00080		.	FALSE	AluSg7	SINE,Alu
chr1	85787118	G	C	0.00104	DDAH1	-	FALSE
chr1	10520669	T	C	0.00022	DFFA	-	FALSE	AluSc8	SINE,Alu
chr6	24720531	C	G	0.00960		.	FALSE	(GGC)n	SINE,Alu
chr1	46076529	A	G	0.00336	NASP	+	TRUE	AluSx	SINE,Alu
chr8	30536606	T	C	9.30891E-05	GSR	-	TRUE	AluSp	SINE,Alu
chr1	10520099	T	C	0.00659		.	FALSE	AluSx	SINE,Alu
chr2	55516911	A	G	0.00719	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	3729217	T	C	0.00119	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	226171340	T	C	0.00462	SDE2	-	TRUE	BC200	SINE,Alu
chr20	25427823	A	G	0.00054	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	76253041	T	A	0.00646	RABGGTB	+	FALSE
chr1	147124310	T	G	0.00968	ACP6	-	FALSE
chr1	19244904	G	A	0.00487	IFFO2	-	FALSE
chr16	10623688	T	C	0.00766	EMP2	-	TRUE	AluSp	SINE,Alu
chr5	175811091	G	A	0.00592	NOP16	-	FALSE
chr1	210025751	G	A	0.00067	DIEXF	+	FALSE	Tigger4a	SINE,Alu
chr15	41597669	A	G	0.00087		.	FALSE	AluSz6	SINE,Alu
chr2	136541072	T	C	0.00496	UBXN4	+	FALSE
chrX	123047170	A	G	0.00855	XIAP	+	FALSE	AluSx	SINE,Alu
chr1	150199123	G	T	0.00625	ANP32E	-	FALSE
chr1	44423703	C	T	1.21014E-14	IPO13	+	FALSE
chr1	205272926	C	T	0.00690	NUAK2	-	FALSE
chr1	155695998	A	G	0.00078	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	46075719	A	G	0.00461	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	53289686	A	G	0.00460	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	145688973	A	G	0.00017	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	2160988	G	A	0.00137	SKI	+	FALSE
chr1	204525669	A	G	0.00169	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	28836975	A	G	0.00202	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	184761312	T	C	0.00443	FAM129A	-	TRUE	AluJo	SINE,Alu
chr1	16889413	T	C	8.21040E-06	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr4	56294628	T	C	0.00234	CLOCK	-	FALSE
chr3	15114492	T	C	0.00073	RBSN	-	TRUE	AluY	SINE,Alu
chr11	119533724	C	G	0.00232	NECTIN1	-	FALSE
chr2	99813007	A	G	0.00027	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	42008521	G	T	0.00882	HIVEP3	-	FALSE
chr1	52817376	T	C	0.00175	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr2	37331025	T	C	0.00029		.	FALSE	AluSx1	SINE,Alu
chr1	53679610	G	A	0.00073	CPT2	+	FALSE	AluSz	SINE,Alu
chr1	46774783	A	G	1.06423E-10	UQCRH	+	FALSE	(AGG)n	SINE,Alu
chr5	149823799	A	T	0.00672	RPS14	-	FALSE
chr1	100654773	T	C	0.00810	DBT	-	TRUE	AluSz	SINE,Alu
chr1	144481235	A	G	1.18230E-05	NBPF20	+	FALSE
chr2	37331745	T	C	0.00097		.	FALSE	AluJb	SINE,Alu
chr12	49745500	A	G	0.00265	DNAJC22	+	TRUE	AluSx3	SINE,Alu
chr1	11347152	A	T	0.00401	UBIAD1	+	FALSE
chr1	1647814	T	C	8.49337E-05	CDK11B,CDK11A	-	FALSE
chr5	177577353	C	A	0.00121	NHP2	-	FALSE
chr2	3592602	T	C	0.00076	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr4	42091668	A	G	0.00430		.	FALSE	AluSp	SINE,Alu
chr3	195962244	G	T	0.00083		.	FALSE
chr4	17803681	T	C	3.85233E-06	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	120612006	G	A	0.00930	NOTCH2	-	FALSE
chr2	217366673	A	G	0.00517		.	FALSE	AluSz	SINE,Alu
chr1	153617980	A	G	0.00272	CHTOP	+	FALSE
chr2	10942687	C	T	0.00082	PDIA6	-	FALSE
chr1	145360700	C	T	0.00134	NBPF20,NBPF10	+	FALSE
chr1	45975673	A	G	0.00242	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	16529016	C	T	0.00024	ARHGEF19	-	FALSE
chr1	19543349	T	C	0.00060	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	2333763	G	A	0.00867	RER1	+	FALSE
chr3	39137789	G	A	0.00579	WDR48	+	FALSE
chr15	91044377	T	C	0.00440	IQGAP1	+	FALSE
chr1	179044181	A	G	0.00790	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	200589813	C	A	0.00034	KIF14	-	FALSE
chr19	58356478	A	G	0.00030	ZNF587B	+	TRUE	AluSx	SINE,Alu
chr3	10193732	A	G	0.00472	VHL	+	TRUE	AluJr	SINE,Alu
chr1	19585903	G	A	0.00575	MRTO4	+	FALSE	AluJr	SINE,Alu
chr4	843695	A	G	0.00602	GAK	-	FALSE
chr1	94352570	G	T	0.00097	GCLM	-	FALSE	AluSx1	SINE,Alu
chr2	206983267	T	C	0.00854		.	FALSE	AluJb	SINE,Alu
chr4	120979673	T	C	0.00074		.	FALSE	AluSg	SINE,Alu
chr1	10043840	G	T	6.08980E-05	NMNAT1	+	FALSE
chr1	53679610	G	A	0.00119	CPT2	+	FALSE	AluSz	SINE,Alu
chr1	47767914	G	A	0.00061	STIL	-	FALSE
chr6	160113872	A	G	0.00863	SOD2	-	FALSE
chr1	115299504	G	T	0.00067	CSDE1	-	FALSE
chr1	1595500	T	C	0.00482	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr1	160967843	T	C	0.00247	F11R	-	TRUE	AluSp	SINE,Alu
chr1	16889864	C	A	0.00020	NBPF1	-	FALSE
chr1	82453022	A	G	0.00532	ADGRL2	+	FALSE
chr2	25013062	T	C	0.00327		.	FALSE
chr16	48386425	A	G	0.00152	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr1	204374665	G	A	0.00717	PPP1R15B	-	FALSE
chr5	37291636	T	C	0.00518		.	FALSE	AluSx3	SINE,Alu
chr1	114443608	A	G	0.00147	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr14	64951277	T	C	0.00077	ZBTB25	-	TRUE	AluSp	SINE,Alu
chr4	39549703	T	C	0.00150	UGDH-AS1,SMIM14	+,-	FALSE	AluSp	SINE,Alu
chr1	10519982	T	C	0.00417		.	FALSE	AluJr	SINE,Alu
chr1	10521130	T	C	0.00807	DFFA	-	TRUE	AluY	SINE,Alu
chr3	10192642	A	G	0.00714	VHL	+	TRUE	AluSx1	SINE,Alu
chr8	95804615	A	G	0.00968	DPY19L4	+	TRUE	AluSq2	SINE,Alu
chr1	109856085	G	A	0.00684	SORT1	-	FALSE
chr1	9329105	T	A	0.00233	H6PD	+	FALSE
chr1	16905837	G	A	0.00029	NBPF1	-	FALSE
chr3	188597556	A	G	0.00309	LPP	+	FALSE
chr5	139931633	C	A	0.00014	SRA1	-	FALSE
chr5	151041885	G	T	0.00644	SPARC	-	FALSE
chr1	145512074	A	G	0.00014	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr12	125269475	T	C	0.00184	SCARB1	-	FALSE
chr5	130538043	A	G	0.00713	LYRM7	+	TRUE	AluSp	SINE,Alu
chr1	10517485	T	C	0.00260		.	FALSE	AluSx1	SINE,Alu
chr1	144931330	C	T	0.00066	NBPF20,PDE4DIP	+,-	FALSE
chr3	49051841	C	A	0.00132	WDR6	+	FALSE
chr4	57326131	A	G	0.00164	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	160990878	C	T	9.31086E-06	F11R	-	FALSE
chr3	150261002	C	T	0.00044	SERP1	-	FALSE
chr1	78603279	A	G	0.00089	GIPC2	+	FALSE
chr2	176791181	T	C	0.00063	LNPK	-	TRUE	MSTD	SINE,Alu
chr1	6662500	C	G	0.00235	KLHL21	-	FALSE
chr1	26144434	G	T	0.00945	SEPN1	+	FALSE
chr1	3545204	C	G	0.00829	TPRG1L	+	FALSE
chr5	52251222	G	T	0.00808		.	FALSE	(GATA)n	SINE,Alu
chr4	139086857	G	A	0.00809	SLC7A11-AS1,SLC7A11	+,-	FALSE
chr1	142660072	T	G	0.00773		.	FALSE
chr20	29631627	T	C	0.00040	FRG1BP	+	FALSE
chr3	101542436	A	G	0.00023	NXPE3	+	TRUE	AluJr	SINE,Alu
chr1	26608017	T	A	3.67009E-06		.	FALSE
chr2	98388810	G	T	6.24900E-05	TMEM131	-	FALSE
chr1	16958833	T	A	0.00765		.	FALSE
chr4	9998493	A	G	5.94150E-05	SLC2A9	-	FALSE
chr1	155032752	A	G	0.00347	LOC100505666,ADAM15	+,-	FALSE
chr1	9161245	T	C	0.00429		.	FALSE	AluSx	SINE,Alu
chr1	19543356	T	C	0.00256	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr15	41591457	A	G	1.25234E-05	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr1	93828011	G	T	0.00464	DR1	+	FALSE
chr1	23381596	T	C	0.00762	KDM1A	+	FALSE
chr1	145511797	T	G	0.00894	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	(T)n	SINE,Alu
chr3	197362030	C	T	0.00302		.	FALSE
chr14	53242746	T	C	0.00051	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr7	128169979	T	G	0.00569		.	FALSE
chr1	85742155	G	A	0.00813	BCL10,LOC646626	+,-	FALSE
chr3	42591046	C	A	0.00933	SEC22C	-	FALSE
chr12	26809316	G	A	0.00150	ITPR2	-	FALSE
chr4	13606576	A	T	0.00737	BOD1L1	-	FALSE
chr17	73819348	T	C	0.00213	UNK	+	FALSE
chr1	16861804	G	A	0.00903	LOC100132147	-	FALSE	tRNA-Glu-GAA	SINE,Alu
chr1	19543457	T	C	0.00012	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	89477559	C	T	0.00044	GBP3	-	FALSE
chr2	129024313	A	G	0.00612	HS6ST1	-	FALSE
chr2	129024408	G	A	0.00502	HS6ST1	-	FALSE
chr3	66419942	A	G	0.00284	SLC25A26	+	FALSE
chr1	27678712	A	G	0.00215	SYTL1	+	TRUE	AluSx1	SINE,Alu
chr22	18571475	A	G	0.00019	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	19934758	C	G	1.75422E-05	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	93308166	C	T	0.00334	FAM69A	-	FALSE
chr2	46612340	G	T	0.00094	EPAS1	+	FALSE
chr3	53260620	T	G	0.00069	TKT	-	FALSE
chr4	57326291	A	G	0.00415	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	25775374	C	T	0.00710	TMEM57	+	FALSE
chr1	145513098	A	G	0.00514	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	191110544	T	G	0.00031	CCDC50	+	FALSE	AluSz	SINE,Alu
chr3	185826764	C	T	0.00364	ETV5	-	FALSE
chr1	94335191	C	T	0.00382	DNTTIP2	-	FALSE
chr1	19542239	T	C	0.00032	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr19	56090351	C	T	1.52943E-09	ZNF579	-	FALSE
chr1	77759578	A	G	0.00283	AK5	+	FALSE
chr7	44841799	A	G	0.00693	PPIA	+	TRUE	AluSx	SINE,Alu
chr1	28920823	A	G	0.00850	RAB42	+	FALSE	AluSx	SINE,Alu
chr1	33068435	A	G	0.00081	ZBTB8A	+	TRUE	AluY	SINE,Alu
chr1	16861718	C	T	0.00891	LOC100132147	-	FALSE
chr2	38971639	A	T	0.00019	SRSF7	-	FALSE
chr1	32637063	C	T	0.00071	KPNA6	+	FALSE
chr22	39415796	A	T	0.00084		.	FALSE	MER49	SINE,Alu
chr1	9162933	C	T	0.00088		.	FALSE
chr3	15113681	T	C	0.00048	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	52306079	T	A	0.00708	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr2	10908893	A	G	0.00087	ATP6V1C2	+	FALSE
chr1	25894472	C	G	0.00063	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr2	3192912	G	A	0.00168	TSSC1	-	FALSE
chr1	75671215	C	T	0.00019	SLC44A5	-	FALSE
chr6	149915565	A	G	0.00198	RPS18P9	+	FALSE
chr1	89271574	T	C	3.83690E-05	PKN2	+	FALSE
chr12	27574433	A	G	0.00473	ARNTL2,ARNTL2-AS1	+,-	FALSE	AluSz	SINE,Alu
chr7	22765456	G	T	5.19964E-05	LOC541472	-	FALSE
chr12	57923211	A	C	0.00071	MBD6	+	FALSE	(C)n	SINE,Alu
chr10	79552092	C	T	0.00159	DLG5	-	FALSE
chr3	110853822	G	T	0.00812	NECTIN3	+	FALSE
chr1	62516683	G	C	0.00966	PATJ	+	FALSE
chr1	32799512	A	T	0.00929	MARCKSL1	-	FALSE
chr1	154128333	T	A	0.00204	TPM3	-	FALSE
chr1	160967855	T	C	0.00050	F11R	-	TRUE	AluSp	SINE,Alu
chr1	36068370	T	C	0.00067	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	569803	G	A	0.00166		.	FALSE
chr12	133389998	T	C	0.00829	GOLGA3	-	FALSE
chr17	73703945	C	T	0.00242	SAP30BP	+	FALSE	MIRc	SINE,Alu
chr1	19543353	T	C	0.00377	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr7	44841931	A	G	0.00054	PPIA	+	TRUE	AluSx	SINE,Alu
chr1	16959698	G	A	0.00086		.	FALSE
chr1	117530217	C	T	0.00048	PTGFRN	+	FALSE
chr1	19543457	T	C	0.00059	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr11	65179817	T	C	0.00599	FRMD8	+	FALSE
chr1	95362514	G	T	0.00279	CNN3	-	FALSE
chr1	161141432	C	G	0.00508	B4GALT3	-	FALSE
chr1	150704483	T	C	0.00028	CTSS	-	TRUE	AluJo	SINE,Alu
chr2	61764098	A	C	0.00112	XPO1	-	FALSE
chr1	205583610	T	C	0.00501	ELK4	-	FALSE
chr3	46007825	T	C	4.58354E-06	FYCO1	-	FALSE
chr2	128060859	T	A	0.00016	MAP3K2	-	FALSE
chr1	21766776	G	C	0.00343	NBPF3	+	FALSE
chr15	32820819	T	G	0.00718	WHAMMP1	-	FALSE
chr1	145509570	A	G	0.00028	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr3	136573440	A	G	0.00038	NCK1-AS1,SLC35G2	+,-	FALSE
chr7	105162562	G	C	0.00096	PUS7	-	FALSE
chr1	6683581	A	C	0.00189	PHF13	+	FALSE

RBP	WDR5
Knock-Method	shRNA
RBP Family	eIF2A
Biosample Name	PDXs
Tissue Type	Breast
Biosample Type	Cell line
# of Control	3
# of Treat	3
Species	Human
Data Source	GEO
Profile ID	GSE113288
Platform	GPL9115
Pubmed ID	31752957

WDR5 - Target Gene Network