RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	9163334	T	C	0.00108		.	FALSE	AluSp	SINE,Alu
chr1	16932912	T	C	0.00525	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	150281011	A	G	0.00016	MRPS21	+	TRUE	AluSz	SINE,Alu
chr1	46075663	A	G	0.00061	NASP	+	TRUE	AluSx4	SINE,Alu
chr3	44791398	T	C	0.00204	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr16	31469030	T	C	0.00065		.	FALSE	AluSz	SINE,Alu
chr2	203742324	T	C	0.00482		.	FALSE	AluJb	SINE,Alu
chr1	1469782	G	C	0.00544	ATAD3A	+	FALSE
chr1	110300588	C	T	0.00232	EPS8L3	-	FALSE
chr1	19543247	T	C	0.00813	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	119212015	G	A	0.00024	POGLUT1	+	FALSE
chr11	75116734	C	A	0.00453	RPS3	+	FALSE
chr2	201774244	T	C	0.00332		.	FALSE	AluSz	SINE,Alu
chr1	117617705	A	G	0.00031	TTF2	+	FALSE
chr1	32661600	C	T	0.00235	TXLNA	+	FALSE	(T)n	SINE,Alu
chr5	125962176	A	G	0.00020	PHAX	+	TRUE	AluSc	SINE,Alu
chr1	17393889	A	G	0.00390	PADI2	-	FALSE
chr10	60157509	T	G	0.00296	TFAM	+	FALSE
chr2	37327670	T	C	0.00297		.	FALSE
chr6	34845648	T	C	0.00790	TAF11	-	FALSE
chr1	213037745	C	G	0.00015	FLVCR1	+	FALSE
chr1	45244411	C	A	0.00656	RPS8	+	FALSE
chr1	89447839	C	G	3.35704E-05	KYAT3,RBMXL1	-	FALSE
chr5	177019207	T	G	0.00584	TMED9	+	FALSE
chr1	10517689	T	C	0.00504		.	FALSE	AluSx1	SINE,Alu
chr1	154179193	A	T	0.00122	C1orf43	-	FALSE
chr1	78414329	G	A	0.00635	FUBP1	-	FALSE	A-rich	SINE,Alu
chr1	33147934	A	G	0.00251	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr6	13788342	T	C	0.00048	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	3545200	G	A	0.00381	TPRG1L	+	FALSE
chr1	144852167	G	T	0.00352	NBPF20,PDE4DIP	+,-	FALSE
chr16	81064543	A	G	0.00066	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	143398850	G	T	0.00639		.	FALSE
chr1	145689537	A	G	0.00341	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr2	191067764	A	T	0.00165	C2orf88	+	FALSE
chr7	16640491	G	A	0.00478	ANKMY2	-	FALSE
chr8	30536015	T	C	0.00286	GSR	-	TRUE	AluJr	SINE,Alu
chr1	120612037	T	G	0.00044	NOTCH2	-	FALSE	(CGC)n	SINE,Alu
chr1	26755209	A	G	0.00745	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr1	36067784	T	C	1.34898E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	64069566	A	G	0.00075	UGP2	+	FALSE
chr3	179042910	A	G	0.00061	ZNF639	+	TRUE	AluSp	SINE,Alu
chr6	57034842	T	G	0.00581	ZNF451,LOC101927211	+,-	FALSE
chr7	44917291	T	C	0.00019	PURB	-	TRUE	AluSz	SINE,Alu
chr1	15844615	A	G	0.00792	CASP9	-	FALSE
chr1	225611661	C	T	0.00113	LBR	-	FALSE
chr1	10520715	T	C	0.00119	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	109192051	T	C	0.00124	HENMT1	-	TRUE	AluJr	SINE,Alu
chr3	12882839	C	G	0.00118	RPL32	-	FALSE
chr3	44791398	T	C	0.00081	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	1650832	A	G	0.00263	CDK11B,CDK11A	-	FALSE
chr1	168220479	A	G	0.00113		.	FALSE	AluSz6	SINE,Alu
chr1	16928622	C	A	0.00011	NBPF1	-	FALSE
chr1	179044239	A	G	0.00143	FAM20B	+	TRUE	AluSx	SINE,Alu
chr17	1486543	G	C	0.00452	SLC43A2	-	FALSE
chr1	46075604	A	G	0.00365	NASP	+	TRUE	AluSx4	SINE,Alu
chr19	46052975	T	C	0.00652	OPA3	-	TRUE	AluSz6	SINE,Alu
chr2	32447868	A	G	0.00663	SLC30A6	+	FALSE
chr1	45976722	G	T	0.00292	MMACHC,PRDX1	+,-	FALSE
chr1	160965287	T	C	0.00766	F11R	-	TRUE	AluSc	SINE,Alu
chr17	57281060	A	G	0.00026	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	43391824	A	T	0.00552	SLC2A1	-	FALSE
chr3	24019990	A	G	0.00308	NR1D2	+	FALSE
chr1	16892135	G	A	0.00508	NBPF1	-	FALSE
chr3	10192784	A	G	1.73909E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	25775374	C	T	0.00710	TMEM57	+	FALSE
chrX	118673382	T	C	0.00021	CXorf56	-	TRUE	AluSz	SINE,Alu
chr2	85548076	A	T	0.00682	TGOLN2	-	FALSE
chr1	33071146	A	G	0.00899	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr4	10099340	T	C	0.00000	WDR1	-	FALSE
chr1	16889004	C	T	0.00878	NBPF1	-	FALSE
chr15	41590973	A	G	1.61675E-06	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	28929961	T	A	0.00068	TAF12	-	FALSE
chr1	67874697	T	C	0.00186	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr12	125627187	C	T	0.00055	AACS	+	FALSE
chr10	61548856	T	C	0.00067	CCDC6	-	FALSE
chr1	211918115	C	T	0.00979	LPGAT1	-	FALSE	MER63D	SINE,Alu
chr16	10625101	T	C	0.00804	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	17345245	C	T	0.00701	SDHB	-	FALSE
chr1	16254872	C	A	4.87895E-08	SPEN	+	FALSE
chr1	206566904	T	C	0.00084	SRGAP2	+	FALSE
chr1	71531596	A	G	1.07667E-05	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr17	65334828	T	C	0.00160	PSMD12	-	TRUE	AluSq	SINE,Alu
chr4	17803616	T	C	1.55934E-06	DCAF16	-	TRUE	AluY	SINE,Alu
chr2	10711446	T	C	0.00014	NOL10	-	FALSE	MSTA	SINE,Alu
chr3	49395757	G	A	3.97123E-06	GPX1	-	FALSE
chr3	88104167	T	C	0.00919	CGGBP1	-	FALSE
chr2	37327665	T	C	2.45403E-06		.	FALSE
chr1	150937771	T	A	0.00026	CERS2	-	FALSE	(ATTTTTT)n	SINE,Alu
chr3	58306802	G	A	4.03384E-05		.	FALSE	AluSz	SINE,Alu
chr8	141530799	G	A	0.00525		.	FALSE
chr1	16893721	A	C	0.00179	NBPF1	-	FALSE
chr1	33149400	A	G	0.00407	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	85548074	T	C	0.00724	TGOLN2	-	FALSE
chr5	40982394	C	T	0.00037	C7	+	FALSE	AluSx1	SINE,Alu
chr1	220239448	T	C	0.00157	RNU5F-1,BPNT1	+,-	FALSE
chr1	33961147	T	G	0.00236	ZSCAN20	+	FALSE
chr1	118066724	A	T	0.00979	MAN1A2	+	FALSE
chr1	45975358	A	G	0.00020	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr16	10623544	T	C	2.29348E-06	EMP2	-	TRUE	AluSp	SINE,Alu
chr5	125962354	A	G	3.71532E-05	PHAX	+	TRUE	AluSc	SINE,Alu
chr2	86248309	T	C	0.00808	LOC90784	-	FALSE
chr15	85184841	T	C	0.00016	WDR73,SCAND2P	+,-	FALSE	AluSz	SINE,Alu
chr1	31905889	A	G	0.00565	SERINC2	+	FALSE
chr1	16534255	C	G	0.00980	ARHGEF19	-	FALSE
chr2	128644574	A	G	0.00163		.	FALSE
chr5	135382989	G	C	7.70449E-09	TGFBI	+	FALSE
chr1	44402565	G	A	0.00010	ARTN	+	FALSE
chr1	16909161	T	C	0.00718	NBPF1	-	FALSE
chr19	7116734	A	T	0.00981	INSR	-	FALSE	(A)n	SINE,Alu
chr1	150619971	G	A	0.00126	GOLPH3L	-	FALSE	AluJo	SINE,Alu
chr1	10518734	T	C	0.00249		.	FALSE	AluSx1	SINE,Alu
chr19	54956254	A	C	0.00417	LENG8-AS1	-	FALSE	MLT2B3	SINE,Alu
chr1	53288870	A	G	0.00184	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	26143698	T	A	0.00832	SEPN1	+	FALSE
chr3	169490779	G	A	0.00147		.	FALSE
chr6	52267967	A	C	0.00424	PAQR8	+	FALSE
chr2	61405795	G	T	0.00061	AHSA2	+	FALSE
chr6	42855182	A	G	0.00583	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr3	42826041	T	G	5.78537E-12	HIGD1A	-	FALSE
chr1	110136329	G	T	0.00993	GNAI3	+	FALSE
chr5	31554465	A	T	1.69098E-06	C5orf22	+	FALSE
chr5	177577138	T	C	0.00163	NHP2	-	FALSE
chr1	183876182	C	T	0.00494	RGL1	+	FALSE
chr1	179045500	C	A	0.00043	FAM20B	+	FALSE
chr1	16892275	C	T	0.00087	NBPF1	-	FALSE
chr1	36032276	A	T	0.00012	NCDN	+	FALSE	(CA)n	SINE,Alu
chr1	78142985	T	C	0.00012	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr1	54692674	A	G	0.00864	SSBP3	-	FALSE
chr1	179042270	T	C	0.00044	FAM20B	+	FALSE
chr1	36068295	T	C	0.00910	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	16861804	G	A	0.00903	LOC100132147	-	FALSE	tRNA-Glu-GAA	SINE,Alu
chr1	145292925	C	T	0.00817	NBPF20	+	FALSE
chr2	37331207	T	C	0.00745		.	FALSE	AluSx1	SINE,Alu
chr1	155214017	C	A	0.00261	GBA	-	FALSE	AluSx3	SINE,Alu
chr8	11701490	T	C	2.07071E-11	CTSB	-	TRUE	AluSx1	SINE,Alu
chr1	40537924	G	A	0.00476	CAP1	+	FALSE	(A)n	SINE,Alu
chr2	183642652	G	A	0.00309	DNAJC10	+	FALSE
chr1	54571374	A	G	0.00280	TCEANC2	+	TRUE	AluSc	SINE,Alu
chr1	179042550	A	G	0.00831	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr4	39550977	T	C	0.00987	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr5	9546451	G	A	0.00030	SNHG18	+	FALSE
chr12	93192784	C	T	0.00423	EEA1	-	FALSE
chr1	37958451	C	G	0.00882	MEAF6	-	FALSE	MER5B	SINE,Alu
chr1	20978324	T	G	0.00153	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr2	202242616	G	A	0.00880	TRAK2	-	FALSE
chr3	141164940	C	A	0.00194	ZBTB38	+	FALSE
chr2	217366194	C	A	0.00359		.	FALSE
chr1	27861184	G	T	0.00425	AHDC1	-	FALSE	(TCTTTT)n	SINE,Alu
chr3	47554503	T	G	0.00720	ELP6	-	FALSE	AluSx	SINE,Alu
chr12	133298275	A	G	4.13546E-09	PGAM5	+	TRUE	AluSp	SINE,Alu
chr2	91806132	T	A	0.00460		.	FALSE	MLT1H1	SINE,Alu
chr1	44463185	T	G	0.00427	SLC6A9	-	FALSE
chr9	140174976	G	T	0.00045	TOR4A	+	FALSE
chr3	68685888	G	A	0.00280		.	FALSE
chr16	48387215	A	G	0.00864	LONP2,MIR5095	+	TRUE	AluJb	SINE,Alu
chr1	114443574	A	G	0.00162	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr2	37331077	T	C	0.00937		.	FALSE	AluSx1	SINE,Alu
chr1	10519912	T	C	0.00750		.	FALSE	AluJr	SINE,Alu
chr1	100489571	G	A	1.40531E-05	SLC35A3	+	FALSE	AluSc	SINE,Alu
chr3	15483019	G	T	0.00751	EAF1	+	FALSE
chr10	75008876	T	C	0.00255	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr2	37076594	T	C	0.00198	STRN	-	FALSE
chr5	170837890	C	A	0.00030		.	FALSE
chr21	34730010	A	G	0.00518	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	9161550	G	A	0.00196		.	FALSE
chr1	33149373	A	G	0.00239	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	29644328	C	T	0.00076	PTPRU	+	FALSE
chr1	15909744	C	T	0.00225	AGMAT	-	FALSE
chr9	34088016	G	A	0.00226	DCAF12	-	FALSE
chr1	40975260	G	C	0.00902	EXO5	+	FALSE
chr5	77655330	T	C	0.00050	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu
chr3	195242996	C	A	0.00136	PPP1R2	-	FALSE
chr3	182639121	A	G	0.00048	ATP11B	+	FALSE
chr6	158505088	A	G	0.00083	SYNJ2	+	FALSE
chr1	53291434	A	G	6.17060E-06	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	246829616	T	C	0.00139	CNST	+	FALSE
chr1	10521200	T	C	0.00096	DFFA	-	TRUE	AluY	SINE,Alu
chr1	9161011	T	C	7.97270E-05		.	FALSE	AluJb	SINE,Alu
chr16	74656352	T	C	0.00187	RFWD3	-	TRUE	AluJb	SINE,Alu
chr3	12624070	C	T	2.78764E-07	MKRN2	+	FALSE
chr16	23582262	T	G	0.00101	UBFD1	+	FALSE
chr1	144931392	G	A	0.00241	NBPF20,PDE4DIP	+,-	FALSE
chr3	196670099	A	C	6.06146E-06	NCBP2-AS2	+	FALSE
chrX	123046892	A	G	0.00064	XIAP	+	TRUE	AluSx	SINE,Alu
chr1	183218871	G	T	0.00025	NMNAT2	-	FALSE
chr4	155456608	A	G	0.00734	PLRG1	-	FALSE	L1MC5	SINE,Alu
chr12	54634284	T	C	0.00247	CBX5	-	TRUE	AluJr	SINE,Alu
chr1	43272842	A	T	5.86577E-06	SVBP	-	FALSE
chr1	11979809	A	C	0.00525	KIAA2013	-	FALSE
chr15	42503335	T	C	0.00023	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr3	99516962	C	A	2.05391E-14	MIR548G	-	FALSE
chr1	85785548	C	T	0.00350	DDAH1	-	FALSE
chr19	41220529	C	T	0.00175	COQ8B	-	FALSE
chr3	170113718	T	C	0.00316	SKIL	+	FALSE
chr1	1345002	A	G	0.00141		.	FALSE	AluSg	SINE,Alu
chr1	148556753	G	A	0.00272		.	FALSE
chr1	144931727	G	A	4.04936E-05	NBPF20,PDE4DIP	+,-	FALSE
chr1	145303971	A	G	0.00060	NBPF20,NBPF10	+	FALSE
chr4	190881971	A	C	0.00183	FRG1	+	FALSE
chr6	3021352	T	C	0.00082	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr1	67874731	T	C	0.00565	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	207250570	A	G	0.00486	PFKFB2	+	FALSE
chr1	9162348	T	C	0.00359		.	FALSE	AluSx	SINE,Alu
chr1	10517527	T	C	0.00453		.	FALSE	AluSx1	SINE,Alu
chr1	19655758	T	A	0.00044	PQLC2	+	FALSE	AluSz	SINE,Alu
chr2	24225013	A	G	0.00103		.	FALSE	AluSx	SINE,Alu
chr21	9908316	C	T	0.00719	TEKT4P2	-	FALSE
chr2	7036682	A	T	0.00335	RSAD2	+	FALSE
chr2	206982358	T	C	0.00080		.	FALSE	AluSg7	SINE,Alu
chr17	49041827	T	C	0.00125	SPAG9	-	TRUE	AluSx	SINE,Alu
chr19	42376702	A	G	6.18708E-08		.	FALSE	AluSp	SINE,Alu
chr2	161130867	C	A	0.00034	RBMS1	-	FALSE
chr6	42855972	A	G	3.93003E-05	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	1594977	T	C	7.82676E-05	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr3	48787757	T	C	0.00605	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr5	79276281	A	G	0.00026	MTX3	-	FALSE
chr3	112320485	T	C	0.00107	LINC01279	-	TRUE	AluJb	SINE,Alu
chr1	218617066	A	T	0.00036	TGFB2-OT1,TGFB2	+	FALSE
chr1	38174987	T	C	0.00350	CDCA8	+	FALSE
chr10	89004545	T	C	0.00057	NUTM2A-AS1	-	FALSE	MSTA	SINE,Alu
chr1	163116048	G	T	3.38683E-05	RGS5	-	FALSE
chr2	190617700	T	C	1.38394E-05	OSGEPL1	-	FALSE
chr2	31491629	A	G	2.09863E-05		.	FALSE
chr1	16928622	C	A	0.00197	NBPF1	-	FALSE
chr5	118174735	T	C	0.00139	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	53289547	A	G	0.00646	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	52375564	T	C	0.00866	RAB3B	-	FALSE
chr1	144874815	T	C	0.00701	NBPF20,PDE4DIP	+,-	FALSE
chr1	16890598	T	A	0.00428	NBPF1	-	FALSE
chr1	10421878	A	G	7.26627E-05	KIF1B	+	FALSE
chr1	24798498	C	T	0.00131	NIPAL3	+	FALSE
chr6	11185161	C	T	0.00297	NEDD9	-	FALSE
chr1	40229368	A	G	0.00209	BMP8B,PPIE	+,-	FALSE
chr1	19586520	A	G	6.58771E-06	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	36067821	T	C	8.78017E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	19585553	A	G	0.00039	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr3	160286646	C	T	0.00086		.	FALSE
chr2	216225584	G	T	0.00848	FN1	-	FALSE
chr9	19373161	A	G	0.00647	DENND4C	+	TRUE	MADE1	SINE,Alu
chr1	228881190	T	G	0.00043	RHOU	+	FALSE
chr20	25427885	A	G	0.00455	GINS1	+	TRUE	AluSz	SINE,Alu
chr4	84525974	T	C	0.00255	GPAT3	+	FALSE	(TTGTT)n	SINE,Alu
chr3	17201871	T	C	0.00626	TBC1D5	-	FALSE
chr1	207942509	A	G	0.00177	CD46	+	TRUE	AluSg4	SINE,Alu
chr1	23835794	A	G	0.00132	E2F2	-	FALSE
chr1	9328120	A	G	4.35354E-06	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	1325721	C	T	0.00471	CCNL2	-	FALSE
chr5	40826639	A	G	0.00978	LOC100506548	-	FALSE	LTR78	SINE,Alu
chr14	20770036	T	C	0.00217	TTC5	-	FALSE
chr1	47142538	G	A	0.00870	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr2	220406239	T	G	0.00014	CHPF	-	FALSE	MIRb	SINE,Alu
chr14	75202544	A	G	3.08187E-07	FCF1	+	TRUE	AluSc	SINE,Alu
chr15	90815787	A	G	0.00055		.	FALSE	FRAM	SINE,Alu
chr1	145500920	T	A	0.00286	NBPF20,NBPF10,LIX1L	+	FALSE
chr2	37328013	T	C	0.00765		.	FALSE
chr12	124146077	A	G	1.08379E-05	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr2	85773494	T	C	0.00099	GGCX	-	TRUE	AluY	SINE,Alu
chr1	36067760	T	C	0.00203	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	189459785	C	T	0.00262	GULP1	+	FALSE
chr1	240255561	G	A	0.00224	FMN2	+	FALSE	(GGC)n	SINE,Alu
chr5	40832549	C	T	2.26031E-05	RPL37	-	FALSE
chr1	27101578	A	G	1.02706E-10	ARID1A	+	FALSE
chr5	40828060	T	C	0.00253	LOC100506548	-	FALSE
chr1	1337737	G	C	2.51903E-05	MRPL20	-	FALSE
chr2	130900880	C	T	0.00044	CCDC74B	-	FALSE
chr1	200521412	G	A	0.00292	KIF14	-	FALSE
chr1	10520331	C	T	0.00527		.	FALSE	AluSx1	SINE,Alu
chr9	115447580	T	C	2.95057E-05	INIP	-	TRUE	AluJb	SINE,Alu
chr17	30327115	C	T	0.00522	SUZ12	+	FALSE
chr1	10517485	T	C	0.00040		.	FALSE	AluSx1	SINE,Alu
chr1	25169201	G	T	0.00341	CLIC4	+	FALSE
chr6	114182986	T	A	0.00316	MARCKS	+	FALSE
chr7	11148863	T	A	0.00455	PHF14	+	FALSE
chr16	10625108	T	C	7.88488E-10	EMP2	-	TRUE	AluSx3	SINE,Alu
chr4	39552646	T	C	0.00555	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	10502831	A	G	0.00193	APITD1,APITD1-CORT	+	FALSE
chr5	159492103	T	G	0.00332	TTC1	+	FALSE
chr6	153292179	T	C	0.00755	FBXO5	-	FALSE
chr1	78414285	T	A	0.00256	FUBP1	-	FALSE
chr1	38275802	T	C	2.04657E-06	MTF1	-	FALSE
chr5	177577353	C	A	0.00121	NHP2	-	FALSE
chr22	16148322	A	G	0.00933		.	FALSE	L1ME2z	SINE,Alu
chr1	1498747	T	C	0.00847	SSU72	-	TRUE	AluSg7	SINE,Alu
chr2	172413267	G	C	0.00938	CYBRD1	+	FALSE
chr3	37366459	C	A	2.94197E-05	GOLGA4	+	FALSE
chr9	21863621	C	A	0.00123	MTAP	+	FALSE	AluY	SINE,Alu
chr6	29857113	C	A	0.00582		.	FALSE
chr4	165998694	T	C	0.00041	TMEM192	-	TRUE	AluSg	SINE,Alu
chr1	179829425	T	C	1.55944E-05	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	54871709	T	C	0.00110	SSBP3	-	FALSE
chr3	14986110	T	C	0.00632	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr3	40577810	A	G	0.00896	ZNF621	+	TRUE	AluSz	SINE,Alu
chr5	9549459	A	G	0.00783	SNHG18	+	FALSE
chr1	900721	T	C	0.00032	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	94995491	C	T	0.00036	F3	-	FALSE	AluSx	SINE,Alu
chr5	17276742	G	A	0.00320	BASP1	+	FALSE
chr1	19953124	G	A	0.00106	MINOS1,MINOS1-NBL1	+	FALSE
chr1	33068435	A	G	0.00081	ZBTB8A	+	TRUE	AluY	SINE,Alu
chr1	59142713	T	C	0.00078	MYSM1	-	FALSE
chr12	98943192	A	G	0.00011	TMPO	+	FALSE	AluSz	SINE,Alu
chr20	18468633	C	A	3.51877E-10	RBBP9	-	FALSE
chr1	1595048	T	C	0.00251	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr5	126889370	C	T	0.00713	PRRC1	+	FALSE
chr9	133997543	C	G	0.00046	AIF1L	+	FALSE
chr19	13054924	A	C	0.00982	CALR	+	FALSE
chr1	155851620	A	G	0.00066	SYT11	+	TRUE	AluSq2	SINE,Alu
chr2	232196570	A	G	0.00765	ARMC9	+	FALSE
chr4	7761114	G	A	8.00249E-13	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	173009536	T	A	0.00519		.	FALSE
chr1	15394286	C	G	0.00260	KAZN	+	FALSE
chr6	33377511	T	C	5.31992E-06		.	FALSE	(TG)n	SINE,Alu
chr1	900725	T	G	0.00110	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr3	20025662	T	G	0.00028	RAB5A,PP2D1	+,-	FALSE
chr17	57281021	A	G	9.11421E-05	PRR11	+	TRUE	AluSz	SINE,Alu
chr12	27953266	G	T	0.00198	KLHL42	+	FALSE
chr1	67874540	T	C	0.00555	SERBP1	-	FALSE
chr1	20982216	T	A	0.00065	DDOST	-	FALSE
chr2	128950515	A	G	0.00208	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	16912029	C	G	0.00831	NBPF1	-	FALSE
chr2	174086940	C	A	0.00047	ZAK,MLK7-AS1	+,-	FALSE	AluJo	SINE,Alu
chr1	145500925	T	A	0.00997	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	33149414	A	G	5.81443E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	55541174	A	G	0.00038	USP24	-	FALSE
chr2	187544222	A	G	0.00411	ITGAV	+	FALSE
chr9	137332311	T	G	0.00036	RXRA	+	FALSE
chr1	23519110	G	A	0.00268	HTR1D	-	FALSE	AluSc	SINE,Alu
chr4	68483513	G	A	3.54156E-05	UBA6	-	FALSE
chr7	138730361	T	C	0.00316	ZC3HAV1	-	FALSE	L2-1_AMi	SINE,Alu
chr1	53291420	A	G	6.80791E-05	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr7	75163757	T	C	0.00448	HIP1	-	FALSE	AluSx1	SINE,Alu
chr1	3395039	G	A	0.00027	ARHGEF16	+	FALSE
chr3	178741082	A	C	0.00145	ZMAT3	-	FALSE
chr1	19542239	T	C	0.00043	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	11323108	T	A	0.00100	ROCK2	-	FALSE	(TA)n	SINE,Alu
chr19	59095573	A	G	0.00169	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr1	6282371	T	C	0.00054	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	145513051	A	G	0.00269	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	19665557	A	C	0.00365	CAPZB	-	FALSE
chr3	160791358	C	T	0.00018	PPM1L	+	FALSE
chr3	99886662	G	A	0.00011	CMSS1	+	FALSE
chr1	36770605	C	T	0.00971	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	10366487	T	G	0.00187	KIF1B	+	FALSE
chr21	34729969	A	G	0.00077	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	145688663	T	G	0.00081	NBPF20,NBPF10,RNF115	+	FALSE
chr10	13320129	A	G	0.00830	PHYH	-	FALSE
chr1	32833540	T	C	0.00381	BSDC1	-	TRUE
chr19	63697	G	A	0.00742	WASH5P	-	FALSE
chr12	120898661	A	G	2.17580E-05	GATC	+	TRUE	AluY	SINE,Alu
chr1	231154935	C	T	0.00093	FAM89A	-	FALSE
chr3	73024350	C	A	0.00109	GXYLT2	+	FALSE
chr1	120163831	A	G	0.00706	ZNF697	-	FALSE
chr2	202152108	A	G	0.00018	CASP8	+	FALSE	AluJb	SINE,Alu
chr1	46075168	C	A	0.00155	NASP	+	FALSE	A-rich	SINE,Alu
chr4	2940364	T	C	0.00718	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr6	42857058	A	G	3.29248E-05	RPL7L1	+	TRUE	AluSp	SINE,Alu
chrX	102613351	A	G	0.00969	TCEAL9	+	FALSE	L1ME4a	SINE,Alu
chr8	12283473	C	T	0.00582	FAM86B2	-	FALSE
chr1	43629982	C	T	0.00118	EBNA1BP2	-	FALSE
chr1	145281543	C	T	0.00031	NBPF20,NOTCH2NL	+	FALSE
chr2	202031806	A	T	0.00543	CFLAR	+	FALSE
chr1	10517538	T	C	0.00840		.	FALSE	AluSx1	SINE,Alu
chr3	195243002	C	A	0.00358	PPP1R2	-	FALSE
chr2	207146629	A	G	0.00434	ZDBF2	+	FALSE
chr5	175816758	T	A	0.00528		.	FALSE
chr1	59122056	G	C	1.57132E-06	MYSM1	-	FALSE
chr2	11323078	C	T	0.00539	ROCK2	-	FALSE
chr3	39449137	T	C	0.00000	RPSA	+	FALSE
chr6	32148031	A	G	1.10299E-06		.	FALSE
chr20	57603729	A	T	0.00444		.	FALSE
chr1	36299630	A	G	0.00828	AGO4	+	FALSE
chr1	28662212	A	G	0.00098	MED18	+	TRUE	AluSq2	SINE,Alu
chr7	44047381	G	A	0.00912	POLR2J4,SPDYE1	+,-	FALSE
chr1	33148287	A	G	0.00052	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr19	16661431	T	C	0.00017	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr3	10193796	A	G	0.00493	VHL	+	TRUE	AluSx	SINE,Alu
chr1	94352553	C	T	0.00136	GCLM	-	FALSE	AluSx1	SINE,Alu
chr1	144868170	C	T	0.00750	NBPF20,PDE4DIP	+,-	FALSE
chr1	44035352	C	T	0.00170	PTPRF	+	FALSE
chr1	9162423	T	C	0.00074		.	FALSE	AluSx	SINE,Alu
chr1	138356	C	A	0.00481	LOC729737	-	FALSE
chr2	87777087	T	C	0.00737	LINC00152	+	FALSE
chr1	165728775	C	T	5.75449E-06	TMCO1	-	FALSE
chr5	130729522	T	G	0.00506	CDC42SE2	+	FALSE	(T)n	SINE,Alu
chr14	50792966	A	T	0.00852		.	FALSE	AluSx	SINE,Alu
chr1	9328255	A	G	0.00729	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	145511988	A	G	0.00900	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	120113403	T	G	2.55249E-11	FSTL1	-	FALSE
chr3	98299365	T	G	3.92075E-11	CPOX	-	FALSE
chr15	42503334	C	T	0.00448	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr1	167759281	T	C	0.00923	MPZL1	+	FALSE
chr1	12401868	A	C	0.00526	VPS13D	+	FALSE
chr1	54871874	C	T	2.61533E-07	SSBP3	-	FALSE
chr1	10517314	T	C	0.00286		.	FALSE	AluJr	SINE,Alu
chr1	9328223	A	G	0.00591	H6PD	+	TRUE	AluJr	SINE,Alu
chr2	1168781	C	A	0.00650	SNTG2	+	FALSE
chr1	19934793	G	A	0.00068	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	46828657	C	T	0.00378	NSUN4	+	FALSE
chr6	157405930	G	A	0.00077	ARID1B	+	FALSE
chr1	74672474	G	A	0.00441	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr1	16203171	C	T	3.13656E-06	SPEN	+	FALSE
chr1	11846104	C	T	0.00297	C1orf167,MTHFR	+,-	FALSE	L1ME4a	SINE,Alu
chr1	117645998	A	G	0.00434		.	FALSE
chr1	212277581	C	T	4.20326E-05	DTL	+	FALSE
chr1	42925688	T	G	0.00637	PPCS	+	FALSE
chr1	16926980	T	C	0.00062	NBPF1	-	FALSE
chr1	10520487	T	C	0.00638		.	FALSE	AluSx1	SINE,Alu
chr6	44222158	T	A	0.00856	SLC35B2	-	FALSE
chr1	10517273	T	C	0.00583		.	FALSE	AluJr	SINE,Alu
chr1	65720330	A	C	0.00211		.	FALSE
chr6	26411987	T	C	0.00405	BTN3A1	+	FALSE
chr3	57611237	A	G	9.49839E-05	DENND6A,PDE12	+,-	FALSE
chr20	43343908	G	A	9.03009E-05	KCNK15-AS1,WISP2	+,-	FALSE	(GC)n	SINE,Alu
chr1	1595006	T	C	1.43617E-06	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	38174366	G	T	0.00879	CDCA8	+	FALSE
chr1	148010973	C	T	0.00045	NBPF8	-	FALSE
chr19	3540006	T	C	3.25622E-05	C19orf71	+	FALSE	AluJo	SINE,Alu
chr1	10517992	T	C	0.00417		.	FALSE	AluJr	SINE,Alu
chr1	6283260	T	C	0.00071	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	40537940	A	C	0.00015	CAP1	+	FALSE	(A)n	SINE,Alu
chr7	100031497	T	G	0.00119	MEPCE	+	FALSE
chr19	18477761	A	G	0.00461	PGPEP1	+	TRUE	AluJb	SINE,Alu
chr7	6501819	A	T	0.00037	KDELR2	-	FALSE
chr16	10626624	T	C	0.00334	EMP2	-	FALSE	(T)n	SINE,Alu
chr1	19542456	T	C	0.00135	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	145512078	A	G	0.00099	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr15	64455123	G	T	1.10189E-06	PPIB	-	FALSE
chr1	3730332	T	C	6.29937E-05	CEP104	-	TRUE	AluSx3	SINE,Alu
chrX	123047170	A	G	0.00855	XIAP	+	FALSE	AluSx	SINE,Alu
chr1	9162456	T	C	0.00043		.	FALSE	AluSx	SINE,Alu
chr1	204525666	A	G	0.00093	MDM4	+	TRUE	AluSz	SINE,Alu
chr12	69237053	A	G	0.00331	MDM2	+	TRUE
chr1	39988084	G	A	0.00060	BMP8A,PPIEL	+,-	FALSE
chr1	164473	T	C	0.00152		.	FALSE	AluSq2	SINE,Alu
chr5	34906547	T	C	0.00051	RAD1	-	TRUE	AluJo	SINE,Alu
chr3	86991597	T	G	0.00481	VGLL3	-	FALSE
chr6	13790964	T	C	5.10728E-05	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr12	133297956	A	G	4.23080E-06	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	114226056	C	A	0.00883	MAGI3	+	FALSE
chr1	209796329	T	A	0.00136	LAMB3	-	FALSE
chr17	4929863	A	G	0.00597	KIF1C	+	TRUE	AluJb	SINE,Alu
chr1	205739266	C	T	0.00125	RAB29	-	FALSE
chr1	55316322	A	G	0.00266	DHCR24	-	FALSE

RBP	CELF1
Knock-Method	siRNA
RBP Family	RRM_1
Biosample Name	UMSCC74B
Tissue Type	Oral Cancer
Biosample Type	Cell line
# of Control	1
# of Treat	1
Species	Human
Data Source	GEO
Profile ID	GSE57254
Platform	GPL11154
Pubmed ID	26498364

CELF1 - Target Gene Network