RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	1534826	C	T	0.00382	FNDC10	-	FALSE
chr6	31324078	G	T	0.00480		.	FALSE
chr14	50713578	T	C	0.00260	L2HGDH	-	TRUE	AluSx	SINE,Alu
chr1	10517992	T	C	0.00417		.	FALSE	AluJr	SINE,Alu
chr1	6282215	T	C	0.00187	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	67874689	T	C	3.52759E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	197612430	A	G	0.00095		.	FALSE	AluSp	SINE,Alu
chr17	73940918	T	C	6.48265E-05	ACOX1	-	TRUE	AluSx1	SINE,Alu
chr1	237065326	C	T	0.00376	MTR	+	FALSE
chr1	46075783	A	G	0.00755	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	36068237	T	C	0.00291	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	86251114	T	C	0.00150		.	FALSE	AluSx	SINE,Alu
chr17	67539228	G	C	0.00200		.	FALSE
chr3	179117266	T	C	0.00111	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	987670	T	G	0.00148	AGRN	+	FALSE
chr1	27202959	T	C	0.00653		.	FALSE	AluSq2	SINE,Alu
chr3	178741082	A	C	0.00145	ZMAT3	-	FALSE
chr1	179044100	A	G	0.00081	FAM20B	+	TRUE	AluSx	SINE,Alu
chr6	34845648	T	C	0.00790	TAF11	-	FALSE
chr6	42855954	A	G	3.50340E-05	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr7	94297301	G	T	0.00145	PEG10	+	FALSE
chr1	10221287	A	G	0.00961	UBE4B	+	FALSE
chr1	19441410	G	A	7.84348E-05	UBR4	-	FALSE
chr3	57548976	A	G	0.00132	PDE12	+	TRUE	FRAM	SINE,Alu
chr1	36067817	T	C	1.59583E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	203742188	T	C	0.00522		.	FALSE	AluJb	SINE,Alu
chr4	73923605	T	C	0.00366	COX18	-	TRUE	AluSq2	SINE,Alu
chr14	74526976	T	C	1.13179E-06	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr19	21367098	A	G	0.00147	ZNF431	+	TRUE	AluSc	SINE,Alu
chr15	85190470	G	T	8.70862E-05	WDR73	-	FALSE
chr2	24494638	T	G	0.00507	ITSN2	-	FALSE	(TATCCT)n	SINE,Alu
chr1	113672640	A	G	0.00629		.	FALSE	AluJb	SINE,Alu
chr1	47140872	T	C	0.00081	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr4	1228741	G	A	0.00095	CTBP1	-	FALSE
chr1	31905888	C	A	0.00667	SERINC2	+	FALSE
chr12	98942665	A	G	1.31028E-05	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	27204515	T	C	0.00337		.	FALSE	AluSg7	SINE,Alu
chr19	46053316	T	C	4.53847E-05	OPA3	-	TRUE	AluSx1	SINE,Alu
chr1	46764013	G	A	0.00224	LRRC41	-	FALSE
chr1	9331254	A	G	0.00793	H6PD	+	TRUE	AluSx	SINE,Alu
chr1	214529740	T	C	0.00375	PTPN14	-	TRUE
chr1	21780000	G	T	0.00153	NBPF3	+	FALSE	ERVL-E-int	SINE,Alu
chr1	21795388	A	G	0.00790	NBPF3	+	FALSE
chr1	1252349	A	G	0.00798	CPSF3L	-	FALSE	AluJr	SINE,Alu
chr16	87440117	C	T	1.93168E-06	ZCCHC14	-	FALSE
chr1	16889596	T	C	0.00093	NBPF1	-	TRUE
chr16	10625101	T	C	0.00804	EMP2	-	TRUE	AluSx3	SINE,Alu
chr3	101369192	C	T	0.00761	ZBTB11	-	FALSE
chr17	76626300	C	T	0.00097	LOC101928710	-	FALSE
chr1	149943157	G	A	0.00024	OTUD7B	-	FALSE
chr5	122165480	C	T	0.00221	SNX2	+	FALSE	(AC)n	SINE,Alu
chr3	172115476	A	G	0.00892	FNDC3B	+	FALSE	(A)n	SINE,Alu
chr2	189459785	C	T	0.00262	GULP1	+	FALSE
chr12	125269489	C	T	0.00817	SCARB1	-	FALSE
chr1	45975345	A	G	0.00227	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	10520487	T	C	0.00638		.	FALSE	AluSx1	SINE,Alu
chr1	1345051	A	G	0.00816		.	FALSE	AluSg	SINE,Alu
chr3	50150360	A	G	0.00651	RBM5	+	TRUE	AluSx	SINE,Alu
chr15	41590288	G	T	0.00349	OIP5-AS1	+	FALSE
chr6	160526548	C	A	0.00086	IGF2R	+	FALSE
chr8	103841636	T	C	2.19081E-06	AZIN1	-	TRUE
chr1	144822920	A	T	0.00040	NBPF20,NBPF9	+	FALSE
chr1	119574537	G	A	0.00255	WARS2	-	FALSE
chr1	117645998	A	G	0.00057		.	FALSE
chr3	181430144	C	T	0.00043	SOX2-OT,SOX2	+	FALSE
chr2	70506337	T	C	0.00313	PCYOX1	+	FALSE
chr4	84525986	G	T	0.00081	GPAT3	+	FALSE	(TTGTT)n	SINE,Alu
chr4	109551185	G	A	0.00344	RPL34	+	FALSE
chr1	32799437	C	T	0.00318	MARCKSL1	-	FALSE
chrX	16781687	A	G	0.00298		.	FALSE	AluSx1	SINE,Alu
chr19	24103987	A	G	1.84513E-07	ZNF726	+	TRUE	AluSg4	SINE,Alu
chr7	6066461	T	C	2.08606E-05	EIF2AK1	-	FALSE
chr4	2841802	A	G	0.00016	SH3BP2	+	TRUE	AluJb	SINE,Alu
chr10	5499824	A	G	0.00070	NET1	+	FALSE
chr1	231398555	A	G	0.00401	GNPAT	+	FALSE
chr2	85773595	T	C	0.00774	GGCX	-	TRUE	AluSx1	SINE,Alu
chr1	87573331	T	C	0.00699	HS2ST1	+	FALSE	(AT)n	SINE,Alu
chr7	6501828	C	A	0.00114	KDELR2	-	FALSE
chr1	23835794	A	G	0.00132	E2F2	-	FALSE
chr10	75008731	T	C	8.90942E-06	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr6	42855200	A	G	2.13337E-05	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr4	17802819	T	C	0.00112	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	43167907	T	C	0.00072	YBX1	+	FALSE
chr1	87213190	A	C	0.00054	SH3GLB1	+	FALSE
chr1	10520767	T	C	5.51501E-05	DFFA	-	TRUE	AluSc8	SINE,Alu
chr6	42060429	T	C	0.00017		.	FALSE	AluSz6	SINE,Alu
chr1	16576295	G	A	0.00231	FBXO42	-	FALSE	A-rich	SINE,Alu
chr5	37290416	T	C	0.00162		.	FALSE	AluSz	SINE,Alu
chr1	1595048	T	C	0.00646	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr14	90865627	T	C	0.00162	CALM1	+	FALSE
chr14	50053350	T	A	0.00071		.	FALSE	7SLRNA	SINE,Alu
chr1	10521200	T	C	3.54723E-07	DFFA	-	TRUE	AluY	SINE,Alu
chr12	46577921	G	T	0.00306	SLC38A1	-	FALSE
chr4	42003671	A	G	0.00535	SLC30A9	+	FALSE
chr8	144940798	T	C	0.00255	EPPK1	-	FALSE
chr1	28564612	C	A	0.00714	ATPIF1	+	FALSE
chr1	67874697	T	C	0.00190	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	48787118	T	C	0.00248	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr3	56655865	A	G	0.00970	FAM208A	-	FALSE	(A)n	SINE,Alu
chr1	117945049	G	A	0.00120	MAN1A2	+	FALSE
chr1	203766875	T	C	3.09664E-07	ZC3H11A,ZBED6	+	FALSE
chr1	26449882	A	G	0.00783	PDIK1L	+	FALSE
chr8	144662353	G	A	0.00951	EEF1D	-	FALSE
chr1	16893721	A	C	0.00179	NBPF1	-	FALSE
chr5	40828060	T	C	0.00253	LOC100506548	-	FALSE
chr1	67874697	T	C	0.00186	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr17	58156064	G	A	9.79781E-05	HEATR6	-	FALSE
chr2	24223159	A	G	0.00717	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr3	48787052	T	C	0.00226	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	246714587	G	A	0.00023	TFB2M	-	FALSE
chr16	88785189	T	C	0.00636	PIEZO1	-	TRUE	AluJr	SINE,Alu
chr7	75163757	T	C	0.00448	HIP1	-	FALSE	AluSx1	SINE,Alu
chr1	36067784	T	C	1.68158E-09	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	202821382	T	C	0.00983		.	FALSE	AluJr	SINE,Alu
chr1	10519973	T	C	0.00586		.	FALSE	AluJr	SINE,Alu
chr1	45279903	C	T	0.00052		.	FALSE	(TCTT)n	SINE,Alu
chr1	204525649	A	G	0.00191	MDM4	+	TRUE	AluSz	SINE,Alu
chr15	30781885	C	T	0.00380		.	FALSE
chr2	76672504	A	G	2.97414E-06		.	FALSE	7SK	SINE,Alu
chr1	207942482	A	G	0.00715	CD46	+	TRUE	AluSg4	SINE,Alu
chr2	164466038	C	A	0.00021	FIGN	-	FALSE
chr1	61922501	A	C	0.00231	NFIA	+	FALSE	A-rich	SINE,Alu
chr8	48889633	A	G	0.00299	MCM4	+	TRUE	AluSx3	SINE,Alu
chr3	12940374	T	G	0.00505	IQSEC1	-	FALSE
chr14	75202722	A	G	0.00022	FCF1	+	TRUE	AluSc	SINE,Alu
chr19	11256689	T	C	9.47404E-06	SPC24	-	TRUE	AluJr4	SINE,Alu
chr4	56291623	G	T	0.00490	TMEM165	+	FALSE
chr1	173009536	T	A	0.00519		.	FALSE
chr2	101186088	C	T	0.00817	PDCL3	+	FALSE
chr3	195635455	T	C	0.00158	TNK2	-	FALSE
chr1	10517653	T	C	0.00038		.	FALSE	AluSx1	SINE,Alu
chr1	10367058	G	A	0.00328	KIF1B	+	FALSE
chr1	100657416	C	T	0.00102	DBT	-	FALSE	AluJb	SINE,Alu
chr2	44459528	G	A	0.00126	PPM1B	+	FALSE
chr1	168218543	A	G	0.00547		.	FALSE	AluSz	SINE,Alu
chr2	65496075	C	T	0.00972	ACTR2	+	FALSE
chr3	176739158	C	A	0.00612	TBL1XR1	-	FALSE
chr6	8014786	T	C	0.00086	BLOC1S5-TXNDC5,BLOC1S5,EEF1E1-BLOC1S5	-	TRUE	AluSz	SINE,Alu
chr1	71532815	G	A	0.00712	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr1	6683581	A	C	0.00126	PHF13	+	FALSE
chr3	183976477	C	T	0.00215	ECE2	+	FALSE
chr1	89447720	G	A	0.00029	KYAT3,RBMXL1	-	FALSE
chr3	22424406	A	T	0.00760		.	FALSE
chr1	75230606	C	T	0.00077	TYW3	+	FALSE
chr3	191114266	T	C	0.00258	CCDC50	+	FALSE
chr2	99812817	A	G	0.00018	MRPL30	+	TRUE	AluJb	SINE,Alu
chr5	40832555	A	T	5.95918E-06	RPL37	-	FALSE
chr5	10265488	A	G	0.00120	CCT5	+	FALSE
chr20	35520229	T	C	3.77169E-05	TLDC2,SAMHD1	+,-	FALSE	AluSx3	SINE,Alu
chr10	22824829	T	C	0.00207	PIP4K2A	-	FALSE
chr17	46803538	C	T	0.00492	HOXB13	-	FALSE
chr1	186332550	A	T	0.00328	TPR	-	FALSE
chr1	17085028	G	A	0.00803	MST1L,LOC102724562	-	FALSE
chr1	205583612	C	A	0.00311	ELK4	-	FALSE
chr1	28662253	A	G	0.00117	MED18	+	TRUE	AluSq2	SINE,Alu
chr2	9629304	A	G	0.00121	ADAM17	-	FALSE
chr1	16933135	G	T	0.00363	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr3	100083460	G	A	0.00041	TOMM70	-	FALSE	FAM	SINE,Alu
chr2	204162277	A	G	0.00097	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr1	78414329	G	A	0.00785	FUBP1	-	FALSE	A-rich	SINE,Alu
chr1	46077218	A	G	0.00543	NASP	+	TRUE	AluSc8	SINE,Alu
chr1	77759578	A	G	0.00283	AK5	+	FALSE
chr1	148556087	G	C	0.00486		.	FALSE
chr1	2323041	T	C	0.00970	MORN1	-	FALSE
chr1	148010952	C	T	0.00393	NBPF8	-	FALSE
chr1	16933628	A	G	0.00430	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	159946750	G	A	0.00105	LINC01133	+	FALSE	(GAAA)n	SINE,Alu
chr1	10521238	T	C	0.00232	DFFA	-	TRUE	AluY	SINE,Alu
chr17	19091395	C	T	0.00852		.	FALSE	U3	SINE,Alu
chr1	6683578	T	C	0.00151	PHF13	+	FALSE
chr10	15120306	T	C	0.00323	ACBD7	-	TRUE	L1PA7	SINE,Alu
chr3	63996262	C	T	0.00273	PSMD6-AS2,PSMD6	+,-	FALSE
chr19	9672979	T	C	0.00028		.	FALSE	AluSx3	SINE,Alu
chr2	232319610	A	T	0.00029	NCL	-	FALSE
chr1	33149495	A	G	0.00421	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr4	17802783	T	C	6.83941E-07	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	16929327	C	T	0.00315	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr7	129963777	T	G	0.00874	CPA4	+	FALSE	(TG)n	SINE,Alu
chr1	160965287	T	C	0.00766	F11R	-	TRUE	AluSc	SINE,Alu
chr3	101369192	C	T	0.00014	ZBTB11	-	FALSE
chr1	6282237	T	C	0.00372	ICMT	-	TRUE	AluSz	SINE,Alu
chr7	44917316	T	C	0.00564	PURB	-	FALSE	AluSz	SINE,Alu
chr1	27205214	T	C	0.00048		.	FALSE	AluSc	SINE,Alu
chr12	19671149	C	T	0.00315	AEBP2	+	FALSE
chr1	117910682	G	A	0.00013	MAN1A2	+	FALSE
chr1	23835919	C	T	0.00872	E2F2	-	FALSE
chr1	10518797	T	C	0.00148		.	FALSE	AluSx1	SINE,Alu
chr1	6582353	T	C	0.00121	NOL9	-	TRUE	AluSx1	SINE,Alu
chr1	184762524	T	C	0.00260	FAM129A	-	TRUE	AluSz	SINE,Alu
chr2	96934504	T	C	0.00021	CIAO1	+	FALSE
chr3	17200672	C	A	0.00665	TBC1D5	-	FALSE
chr6	42855957	A	G	0.00107	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr4	56237899	A	G	0.00503	SRD5A3,SRD5A3-AS1	+,-	FALSE	AluSx	SINE,Alu
chr5	64016339	C	T	6.96791E-06	SREK1IP1	-	FALSE
chr1	154315369	C	T	0.00022	ATP8B2	+	FALSE
chr5	149363273	A	G	0.00114	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr19	58356376	A	G	0.00061	ZNF587B	+	TRUE	AluSx	SINE,Alu
chr1	54691465	C	T	0.00064	SSBP3	-	FALSE
chr17	43002237	C	A	0.00141	KIF18B	-	FALSE
chr1	569492	T	C	0.00336		.	FALSE
chr1	9161245	T	C	0.00480		.	FALSE	AluSx	SINE,Alu
chr1	24128467	C	T	0.00086	HMGCL	-	FALSE
chr9	34088028	T	C	0.00854	DCAF12	-	FALSE
chr3	49315588	T	G	0.00182	USP4	-	FALSE
chr1	28662157	A	G	0.00159	MED18	+	TRUE	AluSq2	SINE,Alu
chr14	75202512	A	G	0.00053	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	16958047	C	T	0.00193		.	FALSE
chr17	65334886	T	C	8.05380E-09	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	144596317	C	T	0.00020	NBPF20	+	FALSE	AluJb	SINE,Alu
chr15	42824348	A	G	0.00685	SNAP23	+	TRUE	AluSg	SINE,Alu
chr1	11780004	G	T	0.00216	DRAXIN	+	FALSE
chr12	133298349	A	G	2.42844E-07	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	117530217	C	T	0.00048	PTGFRN	+	FALSE
chr1	10043527	A	G	0.00811	NMNAT1	+	TRUE	AluSx3	SINE,Alu
chr1	76253041	T	A	0.00646	RABGGTB	+	FALSE
chr3	120113403	T	G	2.55249E-11	FSTL1	-	FALSE
chr3	156258227	T	C	0.00094	SSR3	-	TRUE	AluYk3	SINE,Alu
chr19	4428790	A	T	0.00000	CHAF1A	+	FALSE
chr4	1387223	A	G	0.00155	CRIPAK	+	TRUE	AluSx	SINE,Alu
chr1	117648269	G	A	0.00988		.	FALSE	AluSz6	SINE,Alu
chr1	168212509	A	G	0.00765		.	FALSE
chr2	37328013	T	C	1.05952E-05		.	FALSE
chr2	206983087	T	C	0.00364		.	FALSE	AluJb	SINE,Alu
chr13	111111173	G	A	0.00224	COL4A2,COL4A2-AS2	+,-	FALSE
chr1	32638775	A	T	0.00949	KPNA6	+	FALSE	(A)n	SINE,Alu
chr1	86852362	C	A	0.00073	ODF2L	-	FALSE	AluSz	SINE,Alu
chr1	22419434	T	G	0.00649	CDC42	+	FALSE
chr2	50147866	G	A	0.00130	NRXN1	-	FALSE	(GT)n	SINE,Alu
chr3	47953733	C	A	0.00057	MAP4	-	FALSE
chr1	149913733	T	C	0.00143	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr2	1637531	A	G	0.00664	PXDN	-	FALSE
chr1	36068275	T	C	0.00098	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	16203172	A	G	8.98827E-07	SPEN	+	FALSE
chr1	16957414	C	T	0.00116		.	FALSE
chr9	96438974	C	G	0.00303	PHF2	+	FALSE	(CTCCAC)n	SINE,Alu
chr12	64844149	A	G	0.00456		.	FALSE	AluJr4	SINE,Alu
chr1	67874696	T	C	0.00420	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	53289759	A	G	0.00383	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	1252180	T	C	0.00021	CPSF3L	-	TRUE	AluSx	SINE,Alu
chr1	32799512	A	T	0.00929	MARCKSL1	-	FALSE
chr1	36770601	G	T	0.00055	THRAP3	+	FALSE	(T)n	SINE,Alu
chr4	13604182	T	C	1.45661E-06	BOD1L1	-	FALSE
chr3	194125524	C	T	0.00271	ATP13A3	-	FALSE
chr12	125511958	A	G	0.00010	THRIL	-	FALSE	AluSx1	SINE,Alu
chr2	37329214	T	C	0.00081		.	FALSE	AluJr4	SINE,Alu
chr1	142700116	C	T	0.00081	ANKRD20A12P	-	FALSE
chr1	179044206	A	G	0.00015	FAM20B	+	TRUE	AluSx	SINE,Alu
chr8	17089564	T	C	0.00165	CNOT7	-	FALSE
chr1	10517953	T	A	0.00535		.	FALSE
chr1	16889414	T	C	0.00384	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	1595031	T	C	0.00103	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	53288924	A	G	0.00099	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr4	7761211	C	T	8.70555E-11	AFAP1,AFAP1-AS1	+,-	FALSE
chr2	220308581	A	C	0.00029	SPEG	+	FALSE
chr1	46751578	T	G	0.00380	LRRC41	-	FALSE
chr9	115446725	T	C	0.00037	INIP	-	TRUE	AluJr	SINE,Alu
chr1	33086834	T	C	0.00251	ZBTB8OS	-	TRUE	AluY	SINE,Alu
chr9	131093963	A	G	0.00299	COQ4	+	TRUE	AluJo	SINE,Alu
chr2	114352238	G	A	1.72390E-05	WASH2P	+	FALSE
chr1	155142927	A	G	0.00877	KRTCAP2	-	FALSE
chr1	27992823	A	C	0.00087	IFI6	-	FALSE	FAM	SINE,Alu
chr1	121134245	C	T	0.00174	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	(TTTCCT)n	SINE,Alu
chr1	16889663	A	G	0.00392	NBPF1	-	FALSE
chr1	52306087	C	T	0.00022	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr14	75202963	A	G	2.20276E-06	FCF1	+	TRUE	AluSx	SINE,Alu
chr17	40723650	A	T	0.00250	MLX	+	FALSE
chr1	145689717	A	G	7.73781E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr1	145694181	A	G	0.00052	NBPF20,NBPF10	+	TRUE	AluSz	SINE,Alu
chr9	136209397	G	C	0.00709	MED22	-	FALSE
chr12	1611791	C	G	0.00971	LINC00942	+	FALSE
chr1	26143725	A	T	0.00920	SEPN1	+	FALSE	AluSx	SINE,Alu
chr12	98943201	A	G	9.51066E-07	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	32373437	G	A	3.32434E-12	PTP4A2	-	FALSE
chr2	88895123	T	C	0.00706	EIF2AK3	-	FALSE
chr1	144595886	G	A	0.00242	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	28835937	A	G	0.00121	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	28835937	A	G	0.00061	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	78445292	A	G	7.48186E-07	DNAJB4	+	FALSE
chr1	52520866	C	T	0.00195	TXNDC12	-	FALSE
chr2	189877304	A	T	0.00612	COL3A1	+	FALSE
chr16	10623639	T	C	0.00392	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	179042512	A	G	4.06106E-05	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	39951484	C	A	0.00592	MACF1	+	FALSE
chr1	1677253	T	C	0.00145	SLC35E2	-	FALSE
chr1	93308166	C	T	0.00334	FAM69A	-	FALSE
chr6	42857542	T	A	0.00029	RPL7L1	+	FALSE	MIRc	SINE,Alu
chr14	31916784	T	C	2.67040E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	38327584	T	C	0.00017	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr1	28920823	A	G	0.00850	RAB42	+	FALSE	AluSx	SINE,Alu
chr1	25894468	C	G	0.00265	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	42884086	G	T	0.00040	RIMKLA	+	FALSE
chr7	30634661	C	G	3.93145E-07	GARS	+	FALSE
chr5	122359498	A	C	0.00038	PPIC	-	FALSE	(AC)n	SINE,Alu
chr8	145150065	G	C	0.00585	CYC1	+	FALSE
chr2	101623611	A	C	0.00826	RPL31	+	FALSE
chr1	16011005	G	C	0.00616	PLEKHM2	+	FALSE	(GCG)n	SINE,Alu
chr1	6582470	T	C	0.00370	NOL9	-	TRUE	AluSx1	SINE,Alu
chr18	2804129	G	A	0.00157	SMCHD1	+	FALSE
chrX	152916229	G	A	0.00809	DUSP9	+	FALSE
chr5	41917696	T	A	0.00045	C5orf51	+	FALSE
chr3	39438321	A	T	6.25124E-06	SLC25A38	+	FALSE
chrX	9686187	T	C	0.00420	TBL1X	+	FALSE
chr1	55207988	G	A	0.00914	MROH7-TTC4,TTC4	+	FALSE
chr4	120979673	T	C	0.00074		.	FALSE	AluSg	SINE,Alu
chr1	116237496	T	A	0.00934	VANGL1	+	FALSE
chr1	10518734	T	C	0.00143		.	FALSE	AluSx1	SINE,Alu
chr9	128729384	G	C	0.00059	PBX3	+	FALSE
chr1	38423181	T	G	0.00793	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	1595500	T	C	0.00845	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr3	46007825	T	C	4.58354E-06	FYCO1	-	FALSE
chr1	143135166	G	T	0.00325	LOC102723769	-	FALSE
chr1	109465174	A	C	0.00234	GPSM2	+	FALSE
chr1	120612194	C	G	1.19417E-05	NOTCH2	-	FALSE	(CCG)n	SINE,Alu
chr1	9160982	T	C	0.00304		.	FALSE	AluJb	SINE,Alu
chr1	19542250	T	C	0.00015	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	45976269	C	G	0.00039	MMACHC	+	FALSE
chr1	85785548	C	T	0.00220	DDAH1	-	FALSE
chr12	62928633	G	A	0.00307	MON2	+	FALSE
chr11	65404870	C	T	0.00160	PCNX3	+	FALSE
chr3	58112440	A	G	8.00661E-07	FLNB	+	FALSE
chr16	2553869	A	T	0.00089	TBC1D24	+	FALSE
chr1	33148789	A	G	0.00568	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	28826130	A	G	1.79185E-05	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr2	131129926	G	T	0.00034	PTPN18	+	FALSE
chr1	33147928	A	G	9.58446E-05	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr6	150045755	T	C	0.00041	NUP43	-	TRUE	AluSq	SINE,Alu
chr1	225974645	A	G	0.00984	SRP9	+	TRUE	AluJr	SINE,Alu
chr6	42855101	A	G	0.00329	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	326499	A	G	0.00583		.	FALSE
chr6	42854681	A	G	0.00011	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr4	68484330	G	A	0.00131	UBA6	-	FALSE
chr1	117530273	A	G	0.00601	PTGFRN	+	FALSE
chr22	33257373	G	A	0.00581	SYN3,TIMP3	+,-	FALSE
chr1	149581866	C	G	0.00774	LINC00623,LINC00869,LOC103091866	+	FALSE	L2b	SINE,Alu
chr11	61732461	G	T	2.02182E-05	FTH1	-	FALSE
chr1	203098275	T	G	0.00942	ADORA1	+	FALSE
chr1	53291420	A	G	0.00213	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr8	25272423	G	T	0.00659	DOCK5	+	FALSE
chr2	46612340	G	T	3.13955E-05	EPAS1	+	FALSE
chr4	83406545	A	G	0.00156	TMEM150C	-	FALSE

RBP	WDR5
Knock-Method	shRNA
RBP Family	eIF2A
Biosample Name	PDXs
Tissue Type	Breast
Biosample Type	Cell line
# of Control	3
# of Treat	3
Species	Human
Data Source	GEO
Profile ID	GSE113288
Platform	GPL9115
Pubmed ID	31752957

WDR5 - Target Gene Network