RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	19543785	T	C	0.00492	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	151095753	A	G	0.00256	GABPB2	+	TRUE	AluSz	SINE,Alu
chr1	27107669	T	A	0.00636	ARID1A	+	FALSE	(A)n	SINE,Alu
chr1	19586458	A	G	1.61978E-09	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	168220341	A	G	0.00179		.	FALSE	AluSz6	SINE,Alu
chr1	15899549	T	C	0.00960	AGMAT	-	TRUE	AluSq2	SINE,Alu
chr1	229762054	T	A	0.00535	URB2	+	FALSE
chr1	10520764	T	C	0.00542	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	184761162	T	C	0.00685	FAM129A	-	TRUE	AluJo	SINE,Alu
chr4	155457052	T	A	0.00833	PLRG1	-	FALSE	L2d2	SINE,Alu
chr3	141879810	T	C	0.00784	GK5	-	FALSE	AluJr	SINE,Alu
chr2	37327677	T	C	0.00019		.	FALSE
chr19	57816349	A	G	8.96695E-06		.	FALSE	AluY	SINE,Alu
chr3	48787052	T	C	0.00226	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr11	133689	G	A	0.00856		.	FALSE	AluJb	SINE,Alu
chr1	145368461	A	C	0.00542	NBPF20,NBPF10	+	FALSE
chr2	171634349	T	A	0.00104	ERICH2	+	FALSE
chr6	13790964	T	C	5.10728E-05	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr1	54691905	C	G	0.00611	SSBP3	-	FALSE
chr1	28825465	A	G	0.00496	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	33148691	A	G	0.00117	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	16921146	T	C	0.00835	NBPF1	-	FALSE
chr1	900725	T	G	0.00110	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr3	172350135	A	T	9.93187E-07	NCEH1	-	FALSE
chr1	114940209	G	T	0.00177	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	6683581	A	C	0.00504	PHF13	+	FALSE
chr14	75202704	A	G	2.33511E-06	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	155695960	A	G	1.11424E-05	DAP3	+	TRUE	AluSp	SINE,Alu
chr8	25317824	A	T	0.00017	CDCA2	+	FALSE
chr1	27108139	A	T	0.00683	ARID1A	+	FALSE
chr5	56177851	A	T	0.00796	MAP3K1	+	FALSE	(CAA)n	SINE,Alu
chr2	61277835	A	G	0.00105	PEX13	+	TRUE	AluY	SINE,Alu
chr1	67874689	T	C	7.42611E-10	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr2	191745647	C	T	2.95764E-05	GLS	+	FALSE
chr1	1653046	T	A	0.00686	CDK11B,CDK11A	-	FALSE
chr7	65992794	T	C	0.00820		.	FALSE	AluJr	SINE,Alu
chr1	11783776	C	A	0.00039		.	FALSE	AluSq	SINE,Alu
chr4	2940358	G	A	2.85215E-10	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr5	79923424	T	C	0.00054	DHFR	-	TRUE	AluJr	SINE,Alu
chr1	16890639	C	T	8.47214E-05	NBPF1	-	FALSE
chr1	24999468	G	T	0.00075	SRRM1	+	FALSE	(T)n	SINE,Alu
chr6	74303531	T	C	0.00487	SLC17A5	-	TRUE	AluJr	SINE,Alu
chr1	145324363	G	C	0.00895	NBPF20,NBPF10	+	FALSE
chr1	148556753	G	A	0.00272		.	FALSE
chr2	11321779	A	T	0.00033	ROCK2	-	FALSE	AluSx1	SINE,Alu
chr2	203744241	T	C	0.00511		.	FALSE	AluSx	SINE,Alu
chr1	53289688	A	G	0.00731	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr3	24019987	A	C	0.00563	NR1D2	+	FALSE
chr5	147650355	A	C	0.00222	LOC102546294,SPINK13	+,-	FALSE	MLT1D	SINE,Alu
chr1	184762676	T	C	0.00720	FAM129A	-	TRUE	AluSz	SINE,Alu
chr3	149459413	C	T	0.00097	COMMD2	-	FALSE
chr1	179989742	G	C	0.00019	CEP350	+	FALSE
chr7	24731065	C	T	0.00414	MPP6	+	FALSE	(TGTATG)n	SINE,Alu
chr3	48787715	T	C	0.00863	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr1	144930596	C	A	0.00013	NBPF20,PDE4DIP	+,-	FALSE
chr16	1411036	A	G	0.00766	GNPTG	+	TRUE	AluSz	SINE,Alu
chr1	53289860	A	G	6.18707E-07	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr5	96110979	A	T	0.00020	ERAP1	-	FALSE
chr1	43272842	A	T	5.93810E-05	SVBP	-	FALSE
chr1	16892276	T	C	0.00209	NBPF1	-	FALSE
chr1	114940216	T	G	0.00207	TRIM33	-	FALSE	(T)n	SINE,Alu
chr2	178406767	A	T	0.00416	AGPS	+	FALSE
chr9	128729384	G	C	0.00059	PBX3	+	FALSE
chr2	37330506	T	C	0.00140		.	FALSE	AluSq2	SINE,Alu
chr4	57326291	A	G	0.00279	PAICS	+	TRUE	AluJr	SINE,Alu
chr6	24720539	G	C	0.00225		.	FALSE
chr2	42577806	T	A	0.00276	COX7A2L	-	FALSE
chr1	6704652	C	T	0.00000	DNAJC11	-	FALSE
chr1	31345785	T	A	0.00962	SDC3	-	FALSE
chr3	196670094	G	C	5.91401E-08	NCBP2-AS2	+	FALSE
chr1	16932429	C	G	0.00076	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	10240859	G	T	0.00312	UBE4B	+	FALSE
chr3	10193358	A	G	1.11864E-10	VHL	+	TRUE	L1ME4a	SINE,Alu
chr8	11666384	C	T	0.00029	FDFT1	+	FALSE
chr1	9162223	T	C	0.00778		.	FALSE	AluSx	SINE,Alu
chr1	53289686	A	G	0.00222	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr12	56510696	A	T	0.00767	RPL41	+	FALSE
chr1	28150601	A	T	0.00558	STX12	+	FALSE
chr4	36121337	T	A	0.00065	ARAP2	-	FALSE
chr3	148748197	T	A	0.00026	HLTF	-	FALSE
chr5	96429362	A	T	0.00907	LIX1	-	FALSE
chr1	87811070	G	A	0.00396	LMO4	+	FALSE
chr1	41088377	C	T	2.57179E-08	RIMS3	-	FALSE
chr1	52817504	T	C	0.00934	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr4	190883001	C	G	0.00297	FRG1	+	FALSE
chr1	148004525	C	T	0.00541	NBPF8	-	FALSE
chr12	133298053	A	G	7.95391E-05	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	109181304	C	A	0.00592	FAM102B	+	FALSE
chr2	220416942	G	C	0.00100	OBSL1	-	FALSE
chr5	134670071	A	T	0.00405	C5orf66,H2AFY	+,-	FALSE
chr1	86047210	C	T	0.00201	CYR61	+	FALSE
chr16	719933	T	C	0.00067	RHOT2	+	FALSE
chr2	38971644	T	G	0.00239	SRSF7	-	FALSE
chr1	46828460	C	T	0.00101	NSUN4	+	FALSE
chr4	6644273	C	G	0.00000	MRFAP1	+	FALSE
chr8	41399823	A	G	0.00172	LOC102723729,GINS4	+,-	FALSE	AluSx3	SINE,Alu
chr2	208619675	A	G	0.00012	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr2	99812978	A	G	0.00167	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	36067760	T	C	0.00032	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	53291425	A	G	0.00517	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr15	49419124	T	C	1.84263E-05	COPS2	-	TRUE	MARNA	SINE,Alu
chr2	204301760	C	T	0.00313	RAPH1	-	FALSE
chr1	237064432	C	G	0.00019	MTR	+	FALSE
chrX	54587254	A	G	0.00019	GNL3L	+	TRUE	AluSq2	SINE,Alu
chr3	33038221	C	T	0.00379	GLB1	-	FALSE
chr2	85773494	T	C	0.00099	GGCX	-	TRUE	AluY	SINE,Alu
chr1	118066459	A	G	0.00496	MAN1A2	+	FALSE
chr6	158505088	A	G	0.00083	SYNJ2	+	FALSE
chr2	20648145	A	C	3.92667E-06	RHOB	+	FALSE
chr3	88191439	A	C	0.00657	CGGBP1,ZNF654	+,-	FALSE
chr3	160286646	C	T	0.00086		.	FALSE
chr19	2917287	C	A	0.00243	ZNF57	+	FALSE
chr5	140594466	G	A	0.00209	PCDHB13	+	FALSE
chr10	77807027	T	C	0.00089	C10orf11	+	FALSE
chr21	44330355	A	G	0.00062		.	FALSE	AluSq2	SINE,Alu
chr3	17200672	C	A	0.00665	TBC1D5	-	FALSE
chr1	20978451	T	C	0.00193	PINK1-AS,DDOST	-	TRUE	AluY	SINE,Alu
chr1	109812555	A	C	3.87556E-05	CELSR2	+	FALSE
chr14	31916782	T	C	4.67250E-05	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr13	79188534	T	A	0.00698	RNF219-AS1,RNF219	+,-	FALSE
chr1	45671434	G	C	0.00819	ZSWIM5	-	FALSE
chr1	9165685	G	A	7.66901E-05	GPR157	-	FALSE
chr1	68940885	G	A	0.00500	DEPDC1	-	FALSE	MIR	SINE,Alu
chr1	197070776	C	T	0.00698	ASPM	-	FALSE
chrX	3526659	C	G	0.00188	PRKX	-	FALSE	(AC)n	SINE,Alu
chr2	201774185	T	C	6.12175E-05		.	FALSE	AluSz	SINE,Alu
chr1	9160958	T	C	3.87385E-05		.	FALSE	AluJb	SINE,Alu
chr11	118875356	A	G	0.00051	CCDC84	+	TRUE
chr1	168220489	A	G	0.00525		.	FALSE	AluSz6	SINE,Alu
chr1	121133779	C	G	0.00567	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	19542464	T	C	0.00736	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	46076543	A	G	0.00989	NASP	+	TRUE	AluSx	SINE,Alu
chr1	35648712	G	A	0.00298	SFPQ	-	FALSE
chr2	72968438	G	T	0.00147	EXOC6B	-	FALSE
chr7	44053729	T	C	0.00316	POLR2J4	-	FALSE	AluSg	SINE,Alu
chr1	788844	C	G	0.00406	LINC01128	+	FALSE
chr1	45110404	C	T	0.00230	RNF220	+	FALSE
chr1	1597020	C	G	0.00021	CDK11B,SLC35E2B	-	FALSE
chr1	67874859	T	C	0.00027	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	202861470	C	A	0.00441	KLHL12	-	FALSE
chr3	48485381	T	C	0.00103	TMA7	+	FALSE
chr5	9546451	G	A	0.00030	SNHG18	+	FALSE
chr1	20510981	G	C	0.00197	UBXN10-AS1	-	FALSE
chr2	72405098	C	A	0.00646	EXOC6B	-	FALSE
chr1	24287616	G	A	0.00218	PNRC2	+	FALSE
chr3	39453160	G	A	0.00000	RPSA	+	FALSE
chr1	17394048	T	A	0.00055	PADI2	-	FALSE
chr1	3730332	T	C	0.00025	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	182353198	A	T	0.00985	GLUL	-	FALSE
chr4	103809241	A	T	0.00073	CISD2,SLC9B1	+,-	FALSE
chr1	179843781	T	C	0.00888	TOR1AIP2	-	TRUE	AluJb	SINE,Alu
chr10	62554474	T	G	6.65730E-05	CDK1	+	FALSE
chr19	11560438	A	G	7.61449E-05	PRKCSH	+	FALSE	AluSx	SINE,Alu
chr4	39551166	T	C	0.00309	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	230974329	A	G	0.00355	C1orf198	-	FALSE
chr6	72012435	A	G	0.00723	OGFRL1	+	FALSE	AluSg	SINE,Alu
chr1	146650337	G	T	0.00589	PDIA3P1	+	FALSE
chr19	53155674	T	C	1.27993E-05	ZNF83	-	TRUE	AluSg	SINE,Alu
chr2	234386134	A	G	0.00196	USP40	-	FALSE
chr1	19542239	T	C	0.00038	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	148556726	G	T	0.00976		.	FALSE
chr8	128944717	G	T	0.00091	PVT1	+	FALSE
chr1	10520505	T	C	0.00011		.	FALSE	AluSx1	SINE,Alu
chr6	42857136	A	G	2.38933E-09	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr3	20025661	C	T	4.83976E-05	RAB5A,PP2D1	+,-	FALSE
chr8	144940327	G	A	0.00989	EPPK1	-	FALSE
chr4	39552646	T	C	0.00555	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr3	155660279	A	G	0.00594		.	FALSE
chr1	145369589	T	C	0.00046	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	144595935	G	A	0.00636	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	33148118	A	G	0.00316	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr14	21928999	T	C	2.57107E-05	RAB2B	-	TRUE	AluSp	SINE,Alu
chr5	130537710	A	G	0.00899	LYRM7	+	TRUE	AluJb	SINE,Alu
chr14	53242859	T	C	9.31997E-05	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr1	10518875	T	C	0.00127		.	FALSE	AluSx1	SINE,Alu
chr19	11257644	T	C	0.00991	SPC24	-	TRUE	AluSp	SINE,Alu
chr16	10625058	T	C	2.66942E-12	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	6314743	C	T	0.00615	GPR153	-	FALSE
chr2	85776832	C	T	0.00514	GGCX	-	FALSE
chr2	85546474	T	C	0.00051	TGOLN2	-	TRUE	AluSc	SINE,Alu
chr15	90815787	A	G	0.00055		.	FALSE	FRAM	SINE,Alu
chr1	16953672	C	T	0.00243	CROCCP2	-	FALSE
chr4	5743512	T	C	0.00045	EVC	+	FALSE
chr1	16958047	C	T	2.98219E-05		.	FALSE
chr2	37330146	C	G	2.68632E-05		.	FALSE
chr3	42253664	C	T	0.00065	TRAK1	+	FALSE
chr7	128293103	A	C	0.00313	LINC01000	+	FALSE
chr2	113334414	A	G	0.00281	POLR1B	+	TRUE	AluSz	SINE,Alu
chr1	36068196	T	C	0.00376	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	74665493	G	A	7.81871E-05	FPGT-TNNI3K,FPGT	+	FALSE
chr2	176789423	C	A	0.00441	LNPK	-	FALSE	MSTB1	SINE,Alu
chr19	58375195	A	G	0.00080	ZNF587	+	TRUE	AluSx4	SINE,Alu
chr12	27574427	A	G	7.32829E-06	ARNTL2,ARNTL2-AS1	+,-	FALSE	AluSz	SINE,Alu
chr5	37290323	T	C	8.21848E-08		.	FALSE	AluSz	SINE,Alu
chr1	45452227	G	C	0.00256	EIF2B3	-	FALSE
chr1	39924765	C	A	0.00303	MACF1	+	FALSE
chr1	16892913	A	G	0.00441	NBPF1	-	FALSE
chr1	889183	C	T	3.20836E-06	NOC2L	-	FALSE
chr1	144606963	G	T	0.00080	NBPF20	+	FALSE
chr3	48787052	T	C	0.00631	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr8	40011786	C	A	0.00196	C8orf4	+	FALSE
chr1	206516261	C	T	0.00020	SRGAP2	+	FALSE
chr16	2821028	G	T	9.74054E-05	SRRM2	+	FALSE
chr1	44415424	A	G	0.00213	IPO13	+	FALSE
chr1	10517290	T	C	0.00060		.	FALSE	AluJr	SINE,Alu
chr10	15120279	T	C	0.00255	ACBD7	-	TRUE	L1PA7	SINE,Alu
chr7	44917351	T	C	0.00338	PURB	-	TRUE	AluSz	SINE,Alu
chr1	145688682	A	C	0.00468	NBPF20,NBPF10,RNF115	+	FALSE
chr1	28661718	A	G	0.00520	MED18	+	TRUE	AluSg	SINE,Alu
chr16	81064492	A	G	0.00935	CENPN	+	TRUE	AluSg	SINE,Alu
chr2	37479023	G	A	0.00063	PRKD3	-	FALSE
chr1	27332852	C	T	0.00829	FAM46B	-	FALSE
chr1	67874697	T	C	0.00186	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	12401868	A	C	0.00394	VPS13D	+	FALSE
chr7	131241085	G	A	0.00600	PODXL	-	FALSE	(GCA)n	SINE,Alu
chr5	134062605	C	T	0.00019	SEC24A	+	FALSE
chr1	36068325	T	C	5.92205E-06	PSMB2	-	TRUE	AluSc	SINE,Alu
chr17	3512398	T	C	0.00709	SHPK,TRPV1	-	TRUE	AluSx	SINE,Alu
chr16	10623566	T	C	0.00019	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	19934839	A	G	0.00605	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	153920564	A	G	0.00323	CRTC2	-	FALSE
chr1	100361925	G	A	0.00181	AGL	+	FALSE
chr16	57505662	T	G	0.00332	POLR2C	+	FALSE	(GGTGGG)n	SINE,Alu
chr5	115165591	T	C	0.00407	ATG12	-	TRUE	AluSq2	SINE,Alu
chr1	45244053	A	G	0.00621	RPS8	+	FALSE
chr1	228682330	C	G	0.00509	RNF187	+	FALSE
chr10	61548857	C	A	0.00046	CCDC6	-	FALSE
chr4	57194712	A	C	0.00399	KIAA1211	+	FALSE
chr6	31656514	C	T	0.00325		.	FALSE
chr1	154128838	G	T	0.00062	TPM3	-	FALSE
chr14	23441536	G	A	0.00793	AJUBA	-	FALSE	GA-rich	SINE,Alu
chr1	10517485	T	C	0.00040		.	FALSE	AluSx1	SINE,Alu
chr1	16933658	G	A	0.00699	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr11	71943768	G	T	1.87744E-06	INPPL1	+	FALSE
chr1	31344952	C	T	0.00544	SDC3	-	FALSE
chr19	1863170	G	A	0.00204	KLF16	-	FALSE
chr1	1337738	C	A	4.14710E-05	MRPL20	-	FALSE
chr6	3021492	A	G	0.00613	HTATSF1P2	-	FALSE	Tigger3a	SINE,Alu
chr2	36777209	T	C	0.00299	CRIM1	+	FALSE	(TG)n	SINE,Alu
chr1	234744480	G	A	0.00237	IRF2BP2	-	FALSE
chr3	179117646	G	A	0.00812	GNB4	-	FALSE
chr1	56961756	A	G	0.00265	PLPP3	-	FALSE
chr1	27992800	C	A	0.00011	IFI6	-	FALSE	FAM	SINE,Alu
chr1	3545186	T	G	0.00314	TPRG1L	+	FALSE
chr20	35521049	G	A	0.00711	TLDC2,SAMHD1	+,-	FALSE
chr2	217366896	A	G	0.00457		.	FALSE	AluSz6	SINE,Alu
chr2	217366674	A	G	0.00219		.	FALSE	AluSz	SINE,Alu
chr1	10520153	T	C	0.00999		.	FALSE	AluSx	SINE,Alu
chr1	36068210	T	C	0.00812	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	79277952	A	C	0.00041	MTX3	-	FALSE	(AC)n	SINE,Alu
chr1	184762498	T	C	0.00834	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	16133978	T	C	0.00515	UQCRHL	-	FALSE
chr4	77996987	T	C	0.00240	CCNI	-	FALSE
chr4	109551180	C	A	0.00369	RPL34	+	FALSE
chr1	33149443	A	G	0.00327	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	20945055	C	T	0.00269	CDA	+	FALSE
chr1	93616202	T	C	0.00055	TMED5	-	FALSE
chr1	233514975	G	T	0.00584	MLK4	+	FALSE
chr16	747230	C	G	0.00269	FBXL16	-	FALSE
chr14	74524774	T	C	0.00906	BBOF1,ALDH6A1	+,-	FALSE	AluSc8	SINE,Alu
chr1	160965379	T	C	0.00010	F11R	-	TRUE	AluSc	SINE,Alu
chr1	2336210	C	T	0.00175	RER1	+	FALSE
chr2	32447868	A	G	0.00663	SLC30A6	+	FALSE
chr7	44841239	T	A	0.00199	PPIA	+	FALSE
chr1	46828700	A	G	0.00012	NSUN4	+	FALSE
chr2	37076594	T	C	0.00198	STRN	-	FALSE
chr14	75202834	A	G	7.36085E-05	FCF1	+	TRUE	AluSx	SINE,Alu
chr5	41917695	C	T	0.00546	C5orf51	+	FALSE
chr14	93712365	A	G	0.00210	BTBD7	-	FALSE
chr19	10795968	C	T	0.00700	ILF3	+	FALSE
chr11	68523082	T	C	0.00019	CPT1A	-	TRUE	AluY	SINE,Alu
chr4	40138676	A	G	0.00157	N4BP2	+	FALSE
chr1	45975673	A	G	0.00242	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr5	139931626	T	G	0.00490	SRA1	-	FALSE
chr2	70131954	G	C	0.00370	SNRNP27	+	FALSE
chr1	10520099	T	C	0.00659		.	FALSE	AluSx	SINE,Alu
chr1	109475635	T	C	0.00458	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	144931330	C	T	0.00295	NBPF20,PDE4DIP	+,-	FALSE
chr1	27204865	T	C	0.00042		.	FALSE	AluSx	SINE,Alu
chr1	100489835	A	G	0.00230	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr8	30536078	T	C	0.00509	GSR	-	FALSE	AluJr	SINE,Alu
chr1	154554947	T	G	0.00511	ADAR	-	FALSE
chr19	21474901	T	C	1.34658E-06	ZNF708	-	TRUE	AluSc	SINE,Alu
chr2	20401856	T	G	0.00265	SDC1	-	FALSE
chr6	1395043	T	C	0.00055	FOXF2	+	FALSE
chr5	175811093	A	G	0.00730	NOP16	-	FALSE
chr3	42591046	C	A	0.00933	SEC22C	-	FALSE
chr1	229795330	T	C	0.00334	URB2	+	FALSE
chr2	217366919	A	G	0.00615		.	FALSE	AluSz6	SINE,Alu
chr1	211921723	A	G	4.36683E-06	LPGAT1	-	FALSE
chr3	57612973	T	C	0.00135	DENND6A,PDE12	+,-	FALSE	AluSz	SINE,Alu
chr2	39009355	A	G	0.00079		.	FALSE	AluSx3	SINE,Alu
chr1	77165735	A	G	0.00227		.	FALSE
chr1	16889820	C	T	0.00709	NBPF1	-	FALSE
chr1	67881005	C	T	0.00776	SERBP1	-	FALSE
chr1	6582161	T	C	0.00697	NOL9	-	TRUE	AluSq4	SINE,Alu
chr1	25894466	A	C	0.00783	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	154128835	G	T	0.00032	TPM3	-	FALSE
chr2	99813003	A	G	0.00370	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	10517273	T	C	0.00583		.	FALSE	AluJr	SINE,Alu
chr5	130537761	A	G	0.00947	LYRM7	+	FALSE	AluJb	SINE,Alu
chr7	158590740	A	T	0.00211	ESYT2	-	FALSE
chr1	220323448	C	T	0.00986	RAB3GAP2	-	FALSE
chr1	225974614	A	G	0.00209	SRP9	+	TRUE	AluJr	SINE,Alu
chr6	13790888	T	C	0.00442	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr10	114209912	A	G	0.00060	VTI1A	+	TRUE	AluSx3	SINE,Alu
chr1	148556790	T	A	0.00728		.	FALSE
chr1	227071525	C	T	0.00013	PSEN2	+	FALSE
chr1	118066459	A	G	0.00788	MAN1A2	+	FALSE
chr1	117644949	C	G	0.00440	TTF2	+	FALSE
chr3	109049177	A	T	0.00044	DPPA4	-	FALSE	AluSp	SINE,Alu
chr12	69237077	A	G	0.00445	MDM2	+	TRUE	(GA)n	SINE,Alu
chr2	1637201	C	T	5.10703E-15	PXDN	-	FALSE
chr4	39550978	T	C	3.11849E-06	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr2	128952699	A	G	0.00497	UGGT1	+	TRUE	AluSp	SINE,Alu
chr1	31532312	C	T	0.00215	PUM1	-	FALSE
chr1	144916748	C	G	0.00354	NBPF20,PDE4DIP	+,-	FALSE
chr3	105266274	T	C	4.07026E-07	ALCAM	+	FALSE
chr1	11783041	A	G	0.00036		.	FALSE	AluSx	SINE,Alu
chr1	201488170	A	G	0.00997		.	FALSE	AluSz	SINE,Alu
chr13	31033317	C	T	0.00254	HMGB1	-	FALSE
chr1	117530477	G	A	0.00223	PTGFRN	+	FALSE
chr1	183218871	G	T	0.00025	NMNAT2	-	FALSE
chr1	28261657	C	T	0.00327	SMPDL3B	+	FALSE
chr1	169799880	G	T	0.00118	C1orf112	+	FALSE
chr1	43309548	G	A	0.00764	ERMAP	+	FALSE
chr3	128339057	A	T	0.00535	RPN1	-	FALSE	(A)n	SINE,Alu
chr1	10519982	T	C	0.00572		.	FALSE	AluJr	SINE,Alu
chr9	46687845	G	C	0.00389	FGF7P6,LOC554249,LOC102724238	+,-	FALSE
chr16	10625049	T	C	1.15092E-05	EMP2	-	TRUE	AluSx3	SINE,Alu
chr8	48890247	A	G	2.58682E-14	MCM4	+	TRUE	AluJb	SINE,Alu
chr1	33148691	A	G	0.00547	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	155853061	A	G	0.00146	SYT11	+	TRUE	AluJb	SINE,Alu
chr5	177577138	T	C	0.00163	NHP2	-	FALSE
chr2	37331125	T	C	0.00036		.	FALSE	AluSx1	SINE,Alu
chr1	6283348	T	C	0.00082	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	10093371	C	T	0.00264	UBE4B	+	FALSE
chr1	109818161	C	T	6.45247E-05	CELSR2	+	FALSE
chr4	39552022	T	C	0.00840	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	85278665	A	G	0.00242		.	FALSE
chr1	93307479	C	A	0.00019	FAM69A,RPL5	+,-	FALSE
chr1	19198414	G	A	0.00028	ALDH4A1	-	FALSE
chr5	17276055	T	C	0.00784	BASP1	+	FALSE	(TC)n	SINE,Alu
chr1	53291420	A	G	0.00069	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	145289875	T	C	0.00160	NBPF20	+	FALSE	MIR	SINE,Alu
chr1	16892907	G	A	0.00244	NBPF1	-	FALSE
chr1	203771852	G	T	0.00883	ZC3H11A	+	FALSE	(T)n	SINE,Alu
chr3	52084040	C	T	4.81509E-06	DUSP7	-	FALSE
chr6	42857058	A	G	3.29248E-05	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr2	25013062	T	C	0.00327		.	FALSE
chr7	44917320	T	C	0.00082	PURB	-	TRUE	AluSz	SINE,Alu
chr5	125961623	A	G	6.78430E-09	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	89447839	C	G	0.00488	KYAT3,RBMXL1	-	FALSE
chr1	1634860	G	T	0.00659	CDK11B,CDK11A	-	FALSE
chr1	78142911	T	C	0.00925	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr4	2940164	T	C	0.00381	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	19934839	A	G	0.00052	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	39470977	C	A	0.00347	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr16	10623576	T	C	0.00013	EMP2	-	TRUE	AluSp	SINE,Alu
chr4	73922981	T	C	0.00491	COX18	-	TRUE	AluSz	SINE,Alu
chr3	182632684	G	A	0.00116	ATP11B	+	FALSE
chr22	18571343	A	G	0.00501	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	16889502	T	C	0.00178	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	19586458	A	G	0.00333	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	85278156	C	T	0.00663		.	FALSE	AluSz6	SINE,Alu
chr12	72096318	A	G	0.00547	TMEM19	+	TRUE	AluSz6	SINE,Alu
chr1	45244421	G	A	0.00925		.	FALSE
chr1	19542621	T	C	1.78455E-05	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr1	19543799	T	C	0.00076	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr19	49121788	T	C	0.00017	RPL18	-	FALSE
chr6	108364582	T	C	0.00577	OSTM1	-	FALSE
chr6	32800221	C	T	0.00900		.	FALSE	(GCATCA)n	SINE,Alu
chr4	165998714	T	C	0.00254	TMEM192	-	TRUE	AluSg	SINE,Alu
chr5	122359494	G	C	0.00043	PPIC	-	FALSE
chr1	173862270	G	C	0.00197		.	FALSE	AluSz6	SINE,Alu
chr1	101442570	A	T	0.00377	SLC30A7	+	FALSE
chr9	131457039	C	T	0.00148	SET	+	FALSE
chr1	110049203	G	C	0.00209		.	FALSE
chr1	1234671	G	A	0.00100	ACAP3	-	FALSE
chr1	789050	G	A	0.00449	LINC01128	+	FALSE
chr3	42610515	G	A	0.00099	SEC22C	-	FALSE
chr1	65297860	A	T	0.00847	RAVER2	+	FALSE
chr5	96110544	T	C	0.00295	ERAP1	-	TRUE
chr4	10076860	G	A	1.69987E-09	WDR1	-	FALSE
chr1	45975269	A	G	0.00827	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr3	33909025	A	T	0.00796	PDCD6IP	+	FALSE
chr1	36530674	A	G	0.00603		.	FALSE	AluSg	SINE,Alu
chr1	26608012	C	A	0.00564	SH3BGRL3	+	FALSE
chr4	170643772	C	T	0.00926	CLCN3	+	FALSE
chr19	9673107	T	C	1.71894E-07		.	FALSE	AluSx3	SINE,Alu
chr7	7918285	G	A	0.00255	UMAD1	+	FALSE
chr3	115528809	T	G	0.00087	LSAMP	-	FALSE
chr1	150446028	G	T	0.00624	RPRD2	+	FALSE
chr2	201774774	T	C	0.00017		.	FALSE	AluJr4	SINE,Alu
chr3	193854148	T	A	0.00106	HES1	+	FALSE
chr2	37331627	T	C	0.00030		.	FALSE	AluJb	SINE,Alu
chr9	136209400	A	G	0.00328	MED22	-	FALSE
chr1	37949224	C	T	7.78396E-10	ZC3H12A	+	FALSE
chr1	21100779	T	C	0.00086	HP1BP3	-	TRUE	AluJr	SINE,Alu
chr1	45975345	A	G	0.00357	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr15	59952905	A	G	0.00150	BNIP2	-	FALSE
chr4	17803604	T	C	0.00172	DCAF16	-	TRUE	AluY	SINE,Alu
chr17	45761108	G	T	0.00127		.	FALSE
chr4	2940371	T	C	0.00150	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	38174665	G	A	0.00339	CDCA8	+	FALSE
chr1	16945570	A	G	0.00157	CROCCP2	-	FALSE
chr5	52388458	A	T	0.00152	ITGA2	+	FALSE
chr1	225683184	G	T	0.00741	ENAH	-	FALSE
chr5	149823786	C	T	0.00327		.	FALSE
chr2	72968436	G	C	0.00171	EXOC6B	-	FALSE
chr20	25428308	A	G	0.00185	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	154321623	G	A	0.00782	ATP8B2	+	FALSE
chr1	146650289	C	T	0.00024	PDIA3P1	+	FALSE
chr1	156495521	C	A	0.00097	IQGAP3	-	FALSE
chr1	16890484	G	C	0.00704	NBPF1	-	FALSE
chr1	211918115	C	T	7.42155E-06	LPGAT1	-	FALSE	MER63D	SINE,Alu
chr12	98942808	A	G	0.00019	TMPO	+	TRUE	AluSc	SINE,Alu
chr16	10623631	T	C	1.36144E-05	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	111682307	G	C	5.71833E-05	DRAM2,CEPT1	+,-	FALSE
chr1	28826114	A	G	0.00264	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr3	14986447	T	C	2.03372E-08	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr2	206983267	T	C	0.00133		.	FALSE	AluJb	SINE,Alu
chr2	174086933	C	A	0.00457	ZAK,MLK7-AS1	+,-	FALSE	AluJo	SINE,Alu
chr1	28826128	A	G	0.00483	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	11979815	A	C	0.00274	KIAA2013	-	FALSE
chr2	87002706	G	A	0.00178	RMND5A	+	FALSE
chr1	95362949	A	T	0.00114	CNN3	-	FALSE	(A)n	SINE,Alu
chr10	13320111	G	T	0.00571	PHYH	-	FALSE
chr8	133837579	G	A	0.00019	PHF20L1	+	FALSE	A-rich	SINE,Alu
chr1	6314743	C	T	6.72719E-05	GPR153	-	FALSE
chr20	25428669	A	G	0.00023	GINS1	+	TRUE	AluJb	SINE,Alu
chr3	10192642	A	G	0.00714	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	46032974	T	C	0.00141	AKR1A1	+	FALSE
chr1	987670	T	G	0.00148	AGRN	+	FALSE
chr3	107526182	T	C	7.17610E-07	BBX	+	FALSE
chr1	156565049	A	C	0.00169	GPATCH4	-	FALSE
chr15	86288387	C	T	0.00809	AKAP13	+	FALSE
chr8	145159708	A	G	0.00101	MAF1	+	FALSE
chr12	123253789	A	G	0.00037	DENR	+	TRUE	(AT)n	SINE,Alu
chr3	181430334	G	A	0.00305	SOX2-OT,SOX2	+	FALSE
chr2	198368110	C	A	0.00053	HSPE1,HSPE1-MOB4	+	FALSE
chr1	16932931	C	A	0.00191	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr5	179020622	T	C	2.11448E-05	RUFY1	+	FALSE
chrX	77083846	T	C	0.00668	MAGT1	-	TRUE	AluSz	SINE,Alu
chr3	10193797	A	G	0.00261	VHL	+	TRUE	AluSx	SINE,Alu
chr1	244572643	C	A	0.00560	ADSS	-	FALSE
chr1	153963246	G	A	6.32081E-05	RPS27	+	FALSE
chr3	14986399	T	C	1.19850E-05	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	38279987	T	C	0.00980	MTF1	-	FALSE
chr9	133579674	A	G	0.00018	EXOSC2	+	TRUE	AluSx3	SINE,Alu
chr1	16889624	T	C	0.00795	NBPF1	-	TRUE
chr1	142690928	C	A	0.00022		.	FALSE
chr6	109785887	T	C	7.14632E-06	MICAL1,ZBTB24	-	TRUE	AluJr	SINE,Alu
chr1	36068281	T	C	0.00201	PSMB2	-	TRUE	AluSc	SINE,Alu
chr12	124146077	A	G	1.08379E-05	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr1	10520076	T	C	0.00763		.	FALSE	AluSx	SINE,Alu
chr1	16889575	T	C	0.00969	NBPF1	-	TRUE
chr5	14696117	T	C	0.00807	OTULIN	+	FALSE
chr1	87200773	T	C	0.00098	SH3GLB1	+	FALSE
chr2	27293350	A	T	0.00314	AGBL5,OST4	+,-	FALSE
chr1	53708528	T	C	0.00057	LRP8	-	FALSE	(TA)n	SINE,Alu
chr2	118854108	A	T	0.00568	INSIG2	+	FALSE
chr13	32973012	A	C	0.00231	BRCA2	+	FALSE
chr5	53841238	G	T	0.00267	SNX18	+	FALSE
chr14	24760808	C	T	0.00203	DHRS1	-	FALSE
chr1	16893686	G	C	0.00386	NBPF1	-	FALSE
chr1	145281656	A	T	0.00202	NBPF20,NOTCH2NL	+	FALSE
chr2	74348998	A	G	0.00279		.	FALSE	AluSz	SINE,Alu
chr1	109475543	A	G	0.00495	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	16890428	T	A	1.76753E-05	NBPF1	-	FALSE
chr3	100467676	A	T	0.00288	TFG	+	FALSE
chr6	150045852	T	C	0.00204	NUP43	-	TRUE	AluSq	SINE,Alu

RBP	YBX1
Knock-Method	siRNA
RBP Family	CSD
Biosample Name	BT549
Tissue Type	Breast
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE79586
Platform	GPL167891
Pubmed ID	28813674

YBX1 - Target Gene Network