RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	36068369	T	C	0.00404	PSMB2	-	TRUE	AluSc	SINE,Alu
chr7	128294489	G	T	0.00354	LINC01000	+	FALSE
chr1	6283306	T	C	0.00275	ICMT	-	TRUE	AluSx3	SINE,Alu
chr6	29704336	G	A	0.00207		.	FALSE	L1ME3A	SINE,Alu
chr6	114182982	C	A	0.00308	MARCKS	+	FALSE
chr7	44917405	C	T	0.00024	PURB	-	FALSE	AluSz	SINE,Alu
chr9	115447527	T	C	0.00200	INIP	-	TRUE	AluJb	SINE,Alu
chr3	42610374	A	G	0.00594	SEC22C	-	FALSE
chr3	112720120	T	G	0.00573	GTPBP8	+	FALSE
chr7	65618876	A	G	0.00817	CRCP	+	TRUE	AluSx3	SINE,Alu
chr1	178444613	T	G	0.00630	RASAL2	+	FALSE
chr2	174128513	C	T	0.00069	ZAK,MLK7-AS1	+,-	FALSE
chr1	19542458	T	C	7.14858E-05	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	128064422	C	T	0.00039	MAP3K2	-	FALSE
chr1	31905886	C	A	0.00702	SERINC2	+	FALSE
chr7	143003526	A	T	0.00050	CASP2	+	FALSE	AluY	SINE,Alu
chr13	20247038	A	G	0.00391	MPHOSPH8	+	TRUE	AluJb	SINE,Alu
chr1	7980667	T	C	0.00584	TNFRSF9	-	TRUE	AluJb	SINE,Alu
chr2	46612340	G	T	3.13955E-05	EPAS1	+	FALSE
chr16	75480021	T	C	0.00270	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr1	10519947	T	C	0.00184		.	FALSE	AluJr	SINE,Alu
chr1	145513098	A	G	0.00171	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	1419768	A	G	0.00189	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	31732892	G	A	0.00408	SNRNP40	-	FALSE
chr1	97144546	A	C	0.00803		.	FALSE
chr2	39009355	A	G	0.00079		.	FALSE	AluSx3	SINE,Alu
chr4	39780672	C	A	0.00743	UBE2K	+	FALSE
chr1	185069687	C	T	0.00072	RNF2	+	FALSE
chr16	81064492	A	G	0.00935	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	16889864	C	A	0.00598	NBPF1	-	FALSE
chr15	83826216	C	T	0.00278	HDGFRP3	-	FALSE	(CTT)n	SINE,Alu
chr3	57613144	T	C	0.00959	DENND6A,PDE12	+,-	FALSE	AluSz	SINE,Alu
chr1	24995941	A	G	0.00382	SRRM1	+	FALSE
chr2	217366444	A	G	2.40359E-05		.	FALSE
chr1	78142856	T	C	0.00086	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr16	10625460	T	C	0.00015	EMP2	-	TRUE	AluSx	SINE,Alu
chr19	36033460	C	T	0.00622	GAPDHS,TMEM147-AS1	+,-	FALSE
chr10	95163809	G	T	0.00453	MYOF	-	FALSE
chr2	201774393	T	C	0.00971		.	FALSE	AluSz	SINE,Alu
chr1	145284175	G	C	0.00481	NBPF20,NOTCH2NL	+	FALSE
chr1	44035352	C	T	0.00055	PTPRF	+	FALSE
chr4	169910101	C	T	0.00026	CBR4	-	FALSE
chr17	60522243	C	G	0.00327	METTL2A	+	FALSE
chr15	65442546	T	C	0.00564	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	19543783	T	C	0.00822	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr10	15120275	T	C	0.00017	ACBD7	-	TRUE	L1PA7	SINE,Alu
chr9	34088029	C	T	0.00501	DCAF12	-	FALSE
chr1	10596341	C	T	0.00552	PEX14	+	FALSE
chr2	214182561	C	T	0.00703	SPAG16	+	FALSE	L1MC1	SINE,Alu
chr1	145513016	A	G	0.00069	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr2	74090062	T	G	0.00248	STAMBP	+	FALSE
chr20	35521047	T	A	0.00064	TLDC2,SAMHD1	+,-	FALSE
chr3	196660052	G	A	0.00200	SENP5	+	FALSE	AluSz	SINE,Alu
chr1	46165408	T	C	0.00106	IPP	-	TRUE	FRAM	SINE,Alu
chr3	196662641	T	C	0.00089	NCBP2	-	FALSE
chr1	19542310	T	C	0.00112	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	56961756	A	G	0.00682	PLPP3	-	FALSE
chr1	100731820	G	A	0.00771	RTCA	+	FALSE
chr1	1650832	A	G	0.00065	CDK11B,CDK11A	-	FALSE
chr1	154321623	G	A	0.00782	ATP8B2	+	FALSE
chr1	145284432	G	A	0.00795	NBPF20,NOTCH2NL	+	FALSE
chr1	10517313	T	C	0.00196		.	FALSE	AluJr	SINE,Alu
chr1	180854783	T	C	0.00292	XPR1	+	FALSE
chr5	178224547	A	G	0.00064	AACSP1	-	FALSE
chr3	69154343	C	G	0.00408	ARL6IP5	+	FALSE
chr1	204524555	A	G	1.07581E-05	MDM4	+	TRUE	AluY	SINE,Alu
chr1	109535116	G	A	0.00013	WDR47	-	FALSE
chr2	109401285	G	A	0.00087	RANBP2	+	FALSE
chr3	133538762	A	T	0.00804	SRPRB	+	FALSE
chr17	65335459	T	C	5.16289E-08	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	10520649	T	C	0.00629	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	29644328	C	T	0.00014	PTPRU	+	FALSE
chr1	45110404	C	T	0.00230	RNF220	+	FALSE
chr16	81064440	A	G	0.00409	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	207942535	A	G	0.00102	CD46	+	TRUE	AluSg4	SINE,Alu
chr15	45775144	T	C	0.00867	SLC30A4	-	TRUE	AluJr	SINE,Alu
chr1	16892135	G	A	0.00221	NBPF1	-	FALSE
chr1	180247477	C	T	0.00060		.	FALSE
chr15	33064148	T	C	1.59288E-05	FMN1	-	FALSE
chr1	36067817	T	C	0.00120	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	153599390	T	C	0.00135	S100A13	-	FALSE
chr18	212601	C	A	0.00189	USP14	+	FALSE	AluSz	SINE,Alu
chr3	141668758	T	C	2.84489E-05	TFDP2	-	TRUE	AluSz	SINE,Alu
chr2	201774264	T	C	0.00099		.	FALSE	AluSz	SINE,Alu
chr1	207219603	T	C	0.00341	YOD1	-	FALSE
chr1	9161203	T	C	0.00235		.	FALSE	AluSx	SINE,Alu
chr7	64023437	A	G	0.00073	ZNF680	-	FALSE
chr1	24798068	C	A	0.00686	NIPAL3	+	FALSE	AluJr	SINE,Alu
chr1	204521580	A	G	0.00169	MDM4	+	TRUE	AluSg	SINE,Alu
chr14	31916784	T	C	2.67040E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr11	118880839	A	G	0.00922	CCDC84	+	TRUE	AluJb	SINE,Alu
chr9	33624856	C	T	0.00823	ANXA2P2	+	FALSE
chr1	205737682	A	G	0.00320	RAB29	-	FALSE	AluSq2	SINE,Alu
chr6	160211652	C	G	0.00719	MRPL18	+	FALSE
chr1	31732677	G	A	0.00353	SNRNP40	-	FALSE	A-rich	SINE,Alu
chr1	110136328	T	A	0.00577	GNAI3	+	FALSE
chr3	5257981	T	A	3.55991E-06	EDEM1	+	FALSE	(ATTTT)n	SINE,Alu
chr21	34729969	A	G	0.00077	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr2	207027628	A	G	2.96026E-05	EEF1B2	+	FALSE
chr1	27992798	C	A	0.00690	IFI6	-	FALSE	FAM	SINE,Alu
chr1	151092839	A	G	0.00135	GABPB2	+	TRUE	AluSp	SINE,Alu
chr7	102119322	T	C	0.00834	POLR2J	-	FALSE
chr3	73115126	A	T	0.00228	PPP4R2	+	FALSE
chr6	42855962	A	G	0.00781	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr12	125511242	A	G	0.00015	THRIL	-	FALSE	AluSx1	SINE,Alu
chr3	195963399	G	A	0.00341		.	FALSE
chr1	33149496	A	G	0.00469	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr4	177252327	A	G	2.51883E-09	SPCS3	+	TRUE
chr1	145688973	A	G	0.00283	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	17998	C	T	0.00194	WASH7P	-	FALSE
chr1	24798498	C	T	0.00131	NIPAL3	+	FALSE
chr1	145369007	T	G	0.00703	NBPF20,NBPF10	+	FALSE
chr1	8045340	C	A	0.00059	PARK7	+	FALSE
chr1	1252468	T	C	0.00096	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr1	19586455	A	G	0.00772	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	150939883	A	G	0.00472	CERS2	-	FALSE
chr3	5222483	T	G	1.83612E-05	ARL8B	+	FALSE
chr2	61369944	T	C	0.00024	LOC339803	-	TRUE	AluSx	SINE,Alu
chr1	43996594	T	C	0.00836	PTPRF	+	FALSE	(CGGCTC)n	SINE,Alu
chr7	197428	G	A	3.11254E-09	FAM20C	+	FALSE
chr4	6925237	C	G	0.00870	TBC1D14	+	FALSE
chr5	151041873	A	G	0.00136	SPARC	-	FALSE
chr1	15899312	G	T	0.00776	AGMAT	-	FALSE
chr1	86852362	C	A	0.00073	ODF2L	-	FALSE	AluSz	SINE,Alu
chr1	146400122	C	G	0.00190	NBPF20,NBPF10,NBPF25P,NBPF12	+	FALSE
chr1	100654769	T	C	0.00318	DBT	-	TRUE	AluSz	SINE,Alu
chr7	77409288	A	G	7.47972E-05		.	FALSE	AluSc	SINE,Alu
chr1	44447004	G	A	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr3	107765249	T	C	0.00156	CD47	-	FALSE
chr1	39317318	C	A	1.55431E-15	RRAGC	-	FALSE
chr2	11323276	T	C	0.00219	ROCK2	-	FALSE
chr1	138156	G	T	0.00413	LOC729737	-	FALSE
chr1	173862270	G	C	0.00197		.	FALSE	AluSz6	SINE,Alu
chr12	125627187	C	T	0.00055	AACS	+	FALSE
chr5	52388458	A	T	0.00152	ITGA2	+	FALSE
chr1	11141187	C	G	0.00819	EXOSC10	-	FALSE
chr1	62628606	A	G	0.00027	PATJ	+	TRUE	AluSg4	SINE,Alu
chr2	174086940	C	A	0.00047	ZAK,MLK7-AS1	+,-	FALSE	AluJo	SINE,Alu
chr4	17803681	T	C	3.85233E-06	DCAF16	-	TRUE	AluY	SINE,Alu
chr2	61278030	A	G	0.00218	PEX13	+	TRUE	AluY	SINE,Alu
chr1	113234338	A	C	0.00051	MOV10	+	FALSE
chr1	19542455	T	C	0.00506	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	9910358	T	C	0.00083	CTNNBIP1	-	FALSE
chr20	25428669	A	G	0.00023	GINS1	+	TRUE	AluJb	SINE,Alu
chr5	115166350	T	C	0.00148	ATG12	-	TRUE	AluJr	SINE,Alu
chr1	16973198	G	A	0.00514	MST1P2	+	FALSE
chr1	16932495	A	C	0.00199	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	19585903	G	A	0.00575	MRTO4	+	FALSE	AluJr	SINE,Alu
chr7	117832138	G	A	0.00885	LSM8	+	FALSE
chr15	39879717	G	A	0.00162	THBS1	+	FALSE
chr1	40219280	T	C	0.00025	PPIE	+	FALSE
chr1	16889339	C	T	0.00129	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr7	44841489	A	G	0.00015	PPIA	+	TRUE	AluJr	SINE,Alu
chr1	94660609	C	T	0.00383	ARHGAP29	-	FALSE
chr1	21544601	C	T	0.00196	ECE1	-	FALSE
chr1	79003523	C	G	0.00036	PTGFR	+	FALSE
chr17	57279171	A	G	0.00063	PRR11	+	TRUE	AluSq2	SINE,Alu
chr5	157185192	A	G	0.00835	LSM11	+	TRUE	AluSq	SINE,Alu
chr9	136217449	C	G	0.00158	RPL7A	+	FALSE
chr1	10520505	T	C	0.00011		.	FALSE	AluSx1	SINE,Alu
chr1	114940228	C	T	0.00734	TRIM33	-	FALSE	(T)n	SINE,Alu
chr10	61548855	G	T	0.00070	CCDC6	-	FALSE
chr12	125512507	A	G	0.00276		.	FALSE	AluY	SINE,Alu
chr2	37333930	T	C	0.00073	EIF2AK2	-	FALSE	AluSz	SINE,Alu
chr1	38411445	G	A	0.00625	INPP5B	-	FALSE
chr2	77745788	T	C	0.00000	LRRTM4	-	FALSE
chr2	46414708	G	A	0.00173	PRKCE	+	FALSE
chr5	149363414	A	G	0.00458	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr1	990984	G	A	0.00018	AGRN	+	FALSE
chr11	34379275	T	C	0.00994	ABTB2	-	FALSE
chr8	11700444	C	G	0.00042	CTSB	-	FALSE	AluSq2	SINE,Alu
chr1	146374185	C	G	0.00376	NBPF20,NBPF10,NBPF25P,NBPF12	+	FALSE
chr9	116022896	T	C	9.26547E-05	SLC31A1	+	FALSE
chr1	955597	G	T	3.81431E-06	AGRN	+	FALSE
chr3	14986098	T	C	3.23580E-05	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr6	29911284	T	C	0.00019		.	FALSE
chr1	10520153	T	C	0.00398		.	FALSE	AluSx	SINE,Alu
chr1	156692052	T	A	0.00369	ISG20L2	-	FALSE	AluY	SINE,Alu
chr1	6282420	T	C	0.00133	ICMT	-	TRUE	AluSz	SINE,Alu
chr3	48485452	T	A	0.00363	TMA7	+	FALSE
chr1	19586501	A	G	5.42567E-10	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	69690885	T	C	0.00970	AAK1	-	TRUE	AluSx3	SINE,Alu
chr1	118069696	T	C	0.00922		.	FALSE
chr1	10518921	C	T	0.00398		.	FALSE	AluSx3	SINE,Alu
chr1	27205214	T	C	0.00048		.	FALSE	AluSc	SINE,Alu
chr1	569983	G	A	0.00568		.	FALSE
chr1	204525713	A	G	0.00501	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	205581853	C	T	0.00171	ELK4	-	FALSE
chr1	77759578	A	G	0.00955	AK5	+	FALSE
chr1	25570561	T	A	0.00425	RSRP1	-	FALSE	Alu	SINE,Alu
chr1	28566404	T	G	0.00963		.	FALSE	AluSx1	SINE,Alu
chr3	46007825	T	C	4.58354E-06	FYCO1	-	FALSE
chr20	43707842	A	G	0.00100	STK4	+	TRUE	AluJb	SINE,Alu
chr2	8996701	G	T	0.00063	MBOAT2	-	FALSE	AluSz	SINE,Alu
chr1	100548780	A	T	0.00791	MFSD14A	+	FALSE
chr5	175816759	T	A	0.00018		.	FALSE
chr15	41591451	A	G	1.78515E-09	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr1	115592820	T	C	0.00107	TSPAN2	-	FALSE
chr3	169810030	T	C	0.00659	PHC3	-	TRUE	AluSx	SINE,Alu
chr1	6683582	C	A	0.00152	PHF13	+	FALSE
chr2	201842434	T	C	1.94652E-05	FAM126B	-	TRUE	AluJb	SINE,Alu
chr1	145324363	G	C	0.00895	NBPF20,NBPF10	+	FALSE
chr4	3770069	G	C	0.00018	ADRA2C	+	FALSE
chr2	24225006	A	G	0.00555		.	FALSE	AluSx	SINE,Alu
chr7	2294401	A	G	0.00035	SNX8	-	FALSE
chr1	235612219	T	A	0.00148	TBCE,B3GALNT2	+,-	FALSE
chr2	206986949	T	C	0.00693		.	FALSE	AluJr	SINE,Alu
chr5	49692280	T	C	9.73531E-05	EMB	-	FALSE	L2c	SINE,Alu
chr14	23794557	T	A	0.00983	BCL2L2-PABPN1,PABPN1	+	FALSE	A-rich	SINE,Alu
chr2	174090636	T	A	0.00043	ZAK,MLK7-AS1	+,-	FALSE
chr5	154194420	G	A	0.00137	LARP1	+	FALSE
chr8	101932094	T	A	0.00288	YWHAZ	-	FALSE	MER34B-int	SINE,Alu
chr1	26299050	G	A	0.00110	PAFAH2	-	FALSE
chr2	242291743	A	G	0.00731	SEPT2	+	FALSE
chr5	64097145	C	G	0.00361	CWC27	+	FALSE
chr1	6704652	C	T	1.57063E-06	DNAJC11	-	FALSE
chr1	93617403	T	G	0.00053	TMED5	-	FALSE
chr9	125887702	C	T	0.00019	STRBP	-	FALSE
chr1	87213175	A	T	0.00082	SH3GLB1	+	FALSE
chr18	47918818	A	G	3.50049E-05	SKA1	+	TRUE	AluJb	SINE,Alu
chr3	45721934	A	G	0.00639	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr14	75202950	A	G	0.00307	FCF1	+	TRUE	AluSx	SINE,Alu
chr2	135208352	T	G	0.00259	MGAT5	+	FALSE
chr1	9416151	G	A	0.00292	SPSB1	+	FALSE
chr5	36687341	T	C	0.00930	SLC1A3	+	FALSE
chr1	6354955	G	A	0.00090	ACOT7	-	FALSE
chr1	154323598	T	A	0.00198	ATP8B2	+	FALSE	(TA)n	SINE,Alu
chr1	10518734	T	C	0.00143		.	FALSE	AluSx1	SINE,Alu
chr4	7764501	T	A	5.61153E-09	AFAP1,AFAP1-AS1	+,-	FALSE
chr7	44800040	C	A	0.00565	ZMIZ2	+	FALSE
chr5	35878249	G	A	0.00421	IL7R	+	FALSE
chrX	54587249	A	G	0.00769	GNL3L	+	TRUE	AluSq2	SINE,Alu
chr3	52289298	G	T	0.00059	WDR82	-	FALSE
chr15	33064465	C	G	0.00735	FMN1	-	FALSE
chr2	198572076	A	C	0.00532	MARS2	+	FALSE
chr1	143915747	G	A	0.00603		.	FALSE
chr6	26095484	A	G	0.00231		.	FALSE	AluY	SINE,Alu
chr1	900720	A	T	0.00065	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	113000565	A	G	0.00216	CTTNBP2NL	+	FALSE
chr5	37290400	T	C	0.00282		.	FALSE	AluSz	SINE,Alu
chr1	229730452	G	A	0.00236	TAF5L	-	FALSE
chr1	55316322	A	G	0.00929	DHCR24	-	FALSE
chr1	9161550	G	A	0.00043		.	FALSE
chr4	89179595	T	C	0.00752	PPM1K	-	TRUE	AluSc	SINE,Alu
chr1	1594977	T	C	7.82676E-05	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr3	195694448	C	T	0.00025	SDHAP1	-	FALSE
chr15	50648940	C	T	0.00114	GABPB1-AS1	+	FALSE
chr11	8707396	C	A	0.00081	RPL27A	+	FALSE
chr10	104417856	T	A	0.00616	TRIM8	+	FALSE	(AAT)n	SINE,Alu
chr1	6582498	T	C	0.00403	NOL9	-	TRUE	AluSx1	SINE,Alu
chr1	28825418	A	G	0.00961	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr15	63616883	A	T	0.00036	CA12	-	FALSE
chr12	121772025	T	C	0.00562	ANAPC5	-	TRUE	AluJr	SINE,Alu
chr7	131188652	G	C	0.00684	PODXL	-	FALSE	MIR3	SINE,Alu
chr2	8823941	G	A	0.00053	ID2	+	FALSE
chr1	67874697	T	C	0.00305	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr2	85548074	T	C	0.00428	TGOLN2	-	FALSE
chr4	160280309	G	T	0.00770	RAPGEF2	+	FALSE	(T)n	SINE,Alu
chr2	129024313	A	G	0.00612	HS6ST1	-	FALSE
chr1	23636030	A	T	0.00067	HNRNPR	-	FALSE
chr5	134236206	A	G	0.00065	TXNDC15	+	TRUE	AluSq	SINE,Alu
chr6	17951005	G	C	0.00381	KIF13A	-	FALSE
chr1	40537923	G	A	6.08919E-05	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	11190646	G	A	0.00644	MTOR	-	FALSE
chr2	109301897	T	C	0.00306	LIMS1	+	FALSE
chr7	17384354	A	G	0.00908	AHR	+	TRUE	AluSx	SINE,Alu
chr6	31378510	G	A	0.00104		.	FALSE
chr1	145689701	A	G	0.00765	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr1	134370	T	C	0.00327		.	FALSE	AluSg	SINE,Alu
chr2	203742324	T	C	0.00482		.	FALSE	AluJb	SINE,Alu
chr10	98281480	T	A	0.00620	TM9SF3	-	FALSE
chr5	180001389	G	A	0.00138	CNOT6	+	FALSE
chr1	6259433	G	A	0.00522	RPL22	-	FALSE	G-rich	SINE,Alu
chr1	113239382	G	A	0.00519	MOV10	+	FALSE
chr19	21907988	C	T	0.00295	ZNF100	-	FALSE
chr1	36067821	T	C	1.12344E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	1169973	G	A	0.00783	B3GALT6	+	FALSE
chr1	91486838	G	C	0.00370	ZNF644	-	FALSE
chr1	26802457	C	A	0.00962	HMGN2	+	FALSE
chr1	161488401	T	A	0.00622	FCGR2A	+	FALSE
chr1	10042987	A	G	0.00488	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	144606838	A	G	0.00025	NBPF20	+	FALSE
chr8	56985610	A	T	0.00041	RPS20	-	FALSE
chr1	145369589	T	C	0.00046	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	160966351	T	C	4.07282E-11	F11R	-	TRUE	AluSg	SINE,Alu
chr1	16890155	C	T	0.00388	NBPF1	-	FALSE
chr1	160966353	T	C	0.00011	F11R	-	TRUE	AluSg	SINE,Alu
chr1	168218660	A	G	0.00296		.	FALSE	AluSz	SINE,Alu
chr12	133298417	A	G	6.66134E-16	PGAM5	+	TRUE	AluSp	SINE,Alu
chr5	125961447	A	G	0.00563	PHAX	+	TRUE	AluSz6	SINE,Alu
chr7	129963777	T	G	0.00874	CPA4	+	FALSE	(TG)n	SINE,Alu
chr7	152342445	T	C	0.00059		.	FALSE	AluJo	SINE,Alu
chr2	8823952	T	G	1.04377E-05	ID2	+	FALSE
chr2	38961523	C	A	0.00790	GALM	+	FALSE	AluSc8	SINE,Alu
chr5	118175182	T	C	0.00205	DTWD2	-	TRUE	AluJr	SINE,Alu
chr3	47386061	A	C	8.10198E-06	KLHL18	+	FALSE
chr16	10626615	C	T	0.00489	EMP2	-	FALSE	(T)n	SINE,Alu
chr4	17803537	T	C	0.00366	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	27212513	T	C	0.00260	GPN2	-	FALSE
chr5	132232315	G	A	0.00573	AFF4	-	FALSE
chr3	32567573	G	A	0.00320	DYNC1LI1	-	FALSE	(AT)n	SINE,Alu
chr12	69237056	A	G	0.00372	MDM2	+	TRUE
chr3	24019987	A	C	0.00563	NR1D2	+	FALSE
chr5	130538043	A	G	0.00713	LYRM7	+	TRUE	AluSp	SINE,Alu
chr12	42719890	A	G	0.00730	ZCRB1	-	FALSE
chr4	88059194	C	T	0.00681	AFF1	+	FALSE
chr1	19542239	T	C	0.00038	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	32742441	G	A	2.83845E-11	LCK	+	FALSE
chr2	37429626	A	G	0.00028	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr1	36024788	C	T	5.60663E-14	NCDN	+	FALSE
chr11	74551853	A	C	0.00079	RNF169	+	FALSE
chr2	206982358	T	C	0.00080		.	FALSE	AluSg7	SINE,Alu
chr5	180669695	T	C	0.00101	RACK1	-	TRUE	AluSx1	SINE,Alu
chr12	125269475	T	C	0.00184	SCARB1	-	FALSE
chr1	39305002	A	T	0.00089	RRAGC	-	FALSE
chr3	72426071	T	A	0.00169	RYBP	-	FALSE	(T)n	SINE,Alu
chr1	16939857	C	T	0.00091	NBPF1	-	FALSE
chr1	207942509	A	G	0.00177	CD46	+	TRUE	AluSg4	SINE,Alu
chr5	75469427	G	A	0.00155	SV2C	+	FALSE
chr1	32661600	C	T	0.00235	TXLNA	+	FALSE	(T)n	SINE,Alu
chr16	81064560	A	G	0.00014	CENPN	+	TRUE	AluSg	SINE,Alu
chr2	208619742	A	G	1.70106E-07	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr1	87328397	A	T	0.00252	SEP15	-	FALSE
chr1	45975673	A	G	0.00539	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr3	156259317	T	C	0.00189	SSR3	-	TRUE	AluSq2	SINE,Alu
chr3	105295461	G	A	9.74520E-12	ALCAM	+	FALSE
chr3	40578831	A	G	0.00956	ZNF621	+	TRUE	AluJr	SINE,Alu
chr7	138730361	T	C	0.00316	ZC3HAV1	-	FALSE	L2-1_AMi	SINE,Alu
chr5	96110979	A	T	0.00020	ERAP1	-	FALSE
chr2	128949255	A	G	0.00063	UGGT1	+	TRUE	AluSg	SINE,Alu
chr2	206988452	A	T	0.00669	NDUFS1	-	FALSE
chr2	61764916	A	C	0.00189	XPO1	-	FALSE	(AC)n	SINE,Alu
chr9	136897584	C	A	0.00060	BRD3	-	FALSE	A-rich	SINE,Alu
chr1	6694226	C	T	0.00742	THAP3	+	FALSE
chr11	60658566	A	C	0.00387	PRPF19	-	FALSE
chr1	11083183	G	T	0.00342	TARDBP	+	FALSE
chr4	189026673	A	G	0.00994	TRIML2	-	FALSE
chr3	109049177	A	T	0.00044	DPPA4	-	FALSE	AluSp	SINE,Alu
chr3	105271344	A	G	0.00460	ALCAM	+	FALSE
chr3	156259229	T	C	1.62025E-06	SSR3	-	TRUE	AluSq2	SINE,Alu
chr13	100638107	A	T	0.00841	ZIC2	+	FALSE
chr7	44917316	T	C	0.00564	PURB	-	FALSE	AluSz	SINE,Alu
chr1	28835847	A	G	0.00042	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr3	121435624	C	T	0.00063	GOLGB1	-	FALSE
chr8	8099397	T	C	0.00975	FAM86B3P	+	FALSE
chr1	6583066	T	C	0.00173	NOL9	-	TRUE	AluSx4	SINE,Alu
chr3	196728813	C	T	0.00068	MELTF	-	FALSE
chr3	149679162	T	A	0.00235	RNF13	+	FALSE
chr1	6314822	T	C	0.00300	GPR153	-	FALSE
chr1	36388202	T	G	0.00707	AGO1	+	FALSE	(GCCT)n	SINE,Alu
chr1	20980225	G	T	0.00055	DDOST	-	FALSE
chr1	16890639	C	T	0.00095	NBPF1	-	FALSE
chr12	123253723	A	G	0.00371	DENR	+	TRUE	(AT)n	SINE,Alu
chr4	73922978	T	C	0.00079	COX18	-	TRUE	AluSz	SINE,Alu
chr4	17629377	A	G	0.00890		.	FALSE	AluSx3	SINE,Alu
chr1	2336210	C	T	0.00175	RER1	+	FALSE
chr2	37331753	T	C	0.00026		.	FALSE	AluJb	SINE,Alu
chr3	49571462	G	T	0.00032	DAG1	+	FALSE
chr1	41204569	C	T	0.00854	NFYC	+	FALSE
chr10	51374391	C	G	0.00028	TIMM23B	+	FALSE
chr16	10624966	T	C	3.33519E-08	EMP2	-	TRUE	AluSx3	SINE,Alu
chr5	125961649	A	G	0.00302	PHAX	+	TRUE	AluSz6	SINE,Alu
chr19	48753070	T	C	0.00214	CARD8	-	TRUE
chr6	3021352	T	C	0.00082	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr1	78142901	T	C	0.00332	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr1	113455427	T	A	0.00814	SLC16A1	-	FALSE
chr11	44641025	G	A	0.00850	CD82	+	FALSE
chr1	38423181	T	G	0.00793	SF3A3	-	FALSE	AluJo	SINE,Alu
chr14	53243411	T	C	0.00028	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr7	152551581	T	A	0.00313	ACTR3B	+	FALSE
chr1	1252441	T	C	0.00086	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr5	56177846	G	C	0.00952	MAP3K1	+	FALSE
chr5	180682611	C	A	9.20591E-05	CTC-338M12.4	+	FALSE
chr2	47129284	A	G	0.00327	MCFD2	-	FALSE
chr12	109039869	T	C	0.00795	CORO1C	-	FALSE
chr1	1252248	A	G	0.00503	CPSF3L	-	FALSE	AluSx	SINE,Alu
chr2	174090631	A	C	0.00038	ZAK,MLK7-AS1	+,-	FALSE
chr2	64860431	T	G	0.00213	SERTAD2	-	FALSE
chr4	2940364	T	C	0.00718	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr19	65146	G	A	0.00761	WASH5P	-	FALSE
chr3	188602081	A	C	7.06828E-05	LPP	+	FALSE	MIRc	SINE,Alu
chr1	10521103	T	C	0.00788	DFFA	-	TRUE	AluY	SINE,Alu
chr3	42592138	G	A	0.00056	SEC22C	-	FALSE
chr4	57326156	A	G	0.00170	PAICS	+	TRUE	AluJr	SINE,Alu
chr9	46687845	G	C	0.00389	FGF7P6,LOC554249,LOC102724238	+,-	FALSE
chr4	37953902	T	C	0.00109	TBC1D1	+	FALSE
chr3	121351287	A	G	0.00656	HCLS1	-	FALSE
chr9	137534059	C	A	0.00626	COL5A1	+	FALSE
chr12	98943103	A	G	0.00306	TMPO	+	TRUE	AluSz	SINE,Alu
chr17	49041897	T	C	4.67707E-06	SPAG9	-	TRUE	AluSx	SINE,Alu
chr1	148004307	T	C	0.00935	NBPF8	-	FALSE
chr2	206987561	T	C	0.00235		.	FALSE	AluJb	SINE,Alu
chr1	142700116	C	T	0.00081	ANKRD20A12P	-	FALSE
chr1	46076529	A	G	0.00336	NASP	+	TRUE	AluSx	SINE,Alu
chr1	143189486	A	G	0.00122	LOC102723769	-	FALSE
chr9	138798859	C	A	0.00291	CAMSAP1	-	FALSE
chr1	6282237	T	C	0.00455	ICMT	-	TRUE	AluSz	SINE,Alu
chr11	86646405	C	A	9.05139E-05	PRSS23	+	FALSE	L2b	SINE,Alu
chr1	171751051	A	G	0.00522	METTL13	+	FALSE
chr9	33466219	A	C	0.00148	NOL6	-	FALSE
chr22	39069181	T	C	0.00346	CBY1	+	FALSE
chr1	160990875	T	C	9.42851E-06	F11R	-	FALSE
chr1	149818441	T	C	0.00773		.	FALSE	MLT1D	SINE,Alu
chr15	93198678	T	C	0.00064	FAM174B	-	FALSE	(GCCGCT)n	SINE,Alu
chr12	69160574	A	G	0.00891		.	FALSE	AluJb	SINE,Alu
chr7	99917927	T	C	0.00320	SPDYE3	+	FALSE	AluJb	SINE,Alu
chr3	196230564	G	C	0.00842	RNF168	-	FALSE
chr3	14986104	T	C	6.10128E-05	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr2	37331037	T	C	0.00538		.	FALSE	AluSx1	SINE,Alu
chr1	6583383	T	C	0.00305	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	214557685	C	A	0.00205	PTPN14	-	FALSE
chr1	1337841	C	A	0.00186	MRPL20	-	FALSE
chr5	74324902	C	T	0.00574	GCNT4	-	FALSE
chr1	54692358	G	A	0.00195	SSBP3	-	FALSE
chr3	33909611	C	T	0.00598	PDCD6IP	+	FALSE
chr1	1421186	C	T	0.00834	ATAD3B	+	FALSE
chr2	202901910	G	A	0.00963	FZD7	+	FALSE
chr3	48787674	T	C	0.00240	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr3	75779644	C	A	0.00177	ZNF717	-	FALSE
chr2	27315252	G	A	0.00377	KHK	+	FALSE
chr1	92862888	A	G	0.00029		.	FALSE	AluJr	SINE,Alu
chr4	17803568	T	C	0.00044	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	1018144	T	C	0.00019	C1orf159	-	FALSE
chr1	114307293	A	G	0.00499	RSBN1	-	FALSE
chr1	94930345	G	A	0.00223	ABCD3	+	FALSE
chr8	12884103	T	C	0.00033	KIAA1456	+	FALSE	MIR	SINE,Alu
chr10	79793877	C	T	0.00977	RPS24	+	FALSE
chr17	65334828	T	C	0.00160	PSMD12	-	TRUE	AluSq	SINE,Alu
chr15	65442112	T	C	0.00529	CLPX	-	TRUE	AluSg	SINE,Alu
chr1	23835794	A	G	0.00132	E2F2	-	FALSE
chr1	16890598	T	A	0.00428	NBPF1	-	FALSE
chr5	132203384	T	A	0.00651	UQCRQ	+	FALSE
chr3	44791343	T	C	0.00539	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr1	145273431	A	G	7.55666E-05	NBPF20,NOTCH2NL	+	FALSE
chr2	242615532	C	A	0.00603	DTYMK	-	FALSE
chr2	64327544	G	T	0.00917	PELI1	-	FALSE
chr1	32661600	C	T	0.00584	TXLNA	+	FALSE	(T)n	SINE,Alu
chr1	788795	T	G	0.00333	LINC01128	+	FALSE	Charlie19a	SINE,Alu
chr1	27204447	T	C	0.00513		.	FALSE	AluSg7	SINE,Alu
chr5	134061340	T	A	0.00493	SEC24A	+	FALSE
chr1	114306372	A	G	0.00243	RSBN1	-	FALSE

RBP	YTHDF1
Knock-Method	shRNA
RBP Family	YTH
Biosample Name	HCT116
Tissue Type	Intestin
Biosample Type	Cell line
# of Control	1
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE136664
Platform	GPL20795
Pubmed ID	N.A.

YTHDF1 - Target Gene Network