Dataset Overview
RBP
RBM4
Knock-Method
siRNA_array
RBP Family
RRM_1
Biosample Name
Hela
Tissue Type
Cervix
Biosample Type
Cell line
# of Control
3
# of Treat
3
Species
Human
Data Source
GEO
Profile ID
GSE32933
Platform
GPL5188
Pubmed ID
N.A.
RBM4 - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of RBM4
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Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
ABCC13
-
-
1.00109
0.03977
0.99988
ABCG5
-
-
-0.52394
0.04990
0.99988
ACBD6
-
-
-0.55239
0.04707
0.99988
ACE
-
-
-0.58982
0.02538
0.99988
ACTC1
-
-
2.06490
0.01641
0.99988
ADAM12
-
-
0.77606
0.03259
0.99988
ANKRD1
-
-
0.76695
0.03037
0.99988
ANO3
-
-
-0.87631
0.01118
0.99988
ANXA1
-
-
1.10504
0.01939
0.99988
AP2A2
-
-
0.66279
0.02389
0.99988
Showing 1 to 10 of 240 entries
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Function Analysis of Target Genes of RBM4
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
Showing 0 to 0 of 0 entries
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Show
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entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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Differential Variants in RNA (DVRs)
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Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
No data available in table
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Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression