Dataset Overview
RBP
TUT4
Knock-Method
siRNA_array
RBP Family
PAP_assoc
Biosample Name
H9
Tissue Type
Embryo
Biosample Type
Cell line
# of Control
2
# of Treat
2
Species
Human
Data Source
GEO
Profile ID
GSE53038
Platform
GPL16699
Pubmed ID
25479749
TUT4 - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of TUT4
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Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
A1BG
-
-
-0.60734
0.02725
0.07550
A1BG-AS1
-
-
-1.02294
0.00211
0.01489
A2M
-
-
0.63909
0.01604
0.05222
A4GALT
-
-
0.94846
0.00404
0.02155
AAAS
-
-
-0.87870
0.00120
0.01118
AACS
-
-
-0.77067
0.00272
0.01720
AACSP1
-
-
-1.99938
0.00475
0.02386
AADACL3
-
-
1.50397
7.17935E-05
0.00369
AADAT
-
-
0.74027
0.00702
0.03028
AAK1
-
-
1.25453
0.00016
0.00464
Showing 1 to 10 of 8,987 entries
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Function Analysis of Target Genes of TUT4
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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Show
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100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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Differential Variants in RNA (DVRs)
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entries
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Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
No data available in table
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Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression