Dataset Overview
RBP
RBM10
Knock-Method
siRNA_array
RBP Family
G-patch
Biosample Name
HEK293
Tissue Type
Kidney
Biosample Type
Cell line
# of Control
3
# of Treat
3
Species
Human
Data Source
GEO
Profile ID
GSE114437
Platform
GPL21061
Pubmed ID
30257214
RBM10 - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of RBM10
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Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
A1BG
-
-
-0.75456
3.54576E-05
0.00391
A2ML1
-
-
0.24372
0.03895
0.13055
A4GALT
-
-
-0.99574
0.01081
0.05841
AACS
-
-
-0.39475
0.01360
0.06701
AADACL2
-
-
0.23304
0.00950
0.05440
AADACL4
-
-
0.22312
0.02674
0.10220
AANAT
-
-
0.54568
0.00260
0.02566
AARS
-
-
-0.91990
0.00074
0.01287
AASDHPPT
-
-
0.41671
0.00100
0.01518
AASS
-
-
-0.58069
0.00022
0.00742
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Function Analysis of Target Genes of RBM10
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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Show
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100
entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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Differential Variants in RNA (DVRs)
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entries
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Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
No data available in table
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Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression