Dataset Overview
RBP
THOC1
Knock-Method
shRNA_array
RBP Family
efThoc1
Biosample Name
Not.Specified
Tissue Type
Not.Specified
Biosample Type
Cell line
# of Control
3
# of Treat
3
Species
Human
Data Source
GEO
Profile ID
GSE119412
Platform
GPL17586
Pubmed ID
31390568
THOC1 - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of THOC1
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Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
A4GALT
-
-
-0.06993
0.00237
0.83915
AASDHPPT
-
-
-0.04851
0.03901
0.83915
ACBD3
-
-
-0.17480
0.00500
0.83915
ACOT9
-
-
0.15720
0.02430
0.83915
ACTR3BP6
-
-
0.24154
0.01700
0.83915
ADCY3
-
-
0.12033
0.03412
0.83915
ADK
-
-
0.17800
0.02113
0.83915
AFG3L2
-
-
-0.11141
0.02976
0.83915
AGAP6
-
-
0.28677
0.03912
0.83915
AGAP7
-
-
0.37177
0.03952
0.83915
Showing 1 to 10 of 426 entries
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Function Analysis of Target Genes of THOC1
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
Showing 0 to 0 of 0 entries
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Show
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25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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Differential Variants in RNA (DVRs)
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entries
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Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
No data available in table
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Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression