Dataset Overview
RBP
QKI
Knock-Method
siRNA_array
RBP Family
KH_1
Biosample Name
HEK293
Tissue Type
Kidney
Biosample Type
Cell line
# of Control
2
# of Treat
2
Species
Human
Data Source
GEO
Profile ID
GSE21574
Platform
GPL570
Pubmed ID
20371350
QKI - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of QKI
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Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
A2M-AS1
-
-
-1.00198
0.01733
0.07519
AAAS
-
-
-0.47178
0.00099
0.01333
AACS
-
-
-0.24041
0.00238
0.02114
AADAT
-
-
-0.65795
0.02196
0.08868
AAMDC
-
-
0.39670
0.00140
0.01593
AAR2
-
-
0.37684
0.01568
0.07038
AARS
-
-
-0.19948
0.03592
0.12734
AASDHPPT
-
-
-0.34451
0.00206
0.01964
AASS
-
-
-0.57292
0.00131
0.01539
AATF
-
-
-0.55871
0.00012
0.00542
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Function Analysis of Target Genes of QKI
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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Differential Variants in RNA (DVRs)
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Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
No data available in table
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Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression