Dataset Overview
RBP
RBFOX2
Knock-Method
shRNA_array
RBP Family
Fox-1_C
Biosample Name
HEK293T
Tissue Type
Kidney
Biosample Type
Cell line
# of Control
3
# of Treat
3
Species
Human
Data Source
GEO
Profile ID
GSE77634
Platform
GPL17585
Pubmed ID
27018577
RBFOX2 - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of RBFOX2
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Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
A2ML1-AS1
-
-
0.86241
0.00226
0.05516
AADAC
-
-
-0.34508
0.04171
0.21947
AADAT
-
-
0.20506
0.00183
0.05011
AAED1
-
-
-0.20908
0.00676
0.08913
AAGAB
-
-
-0.17113
0.01248
0.11967
AARS
-
-
0.23547
0.00280
0.06001
AARS2
-
-
0.19662
0.01573
0.13448
AASDHPPT
-
-
0.29691
0.00238
0.05639
ABAT
-
-
0.25294
0.00473
0.07548
ABCA3
-
-
-0.15336
0.01898
0.14733
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Function Analysis of Target Genes of RBFOX2
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
Showing 0 to 0 of 0 entries
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Show
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entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
No data available in table
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Differential Variants in RNA (DVRs)
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entries
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Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
No data available in table
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Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression