Dataset Overview
RBP
ACIN1
Knock-Method
siRNA
RBP Family
SAP
Biosample Name
Hela
Tissue Type
Cervix
Biosample Type
Cell line
# of Control
3
# of Treat
3
Species
Human
Data Source
GEO
Profile ID
GSE81460
Platform
GPL11154
Pubmed ID
27365209
ACIN1 - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of ACIN1
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Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
A2M
4.81
10.25
1.17015
4.08219E-107
2.82143E-105
A2MP1
0.36
1.33
1.67872
2.97461E-10
9.54567E-10
A4GALT
3.86
2.43
-0.58535
2.34906E-07
6.00986E-07
AAAS
34.76
36.4
0.14641
3.99522E-05
8.29062E-05
AACS
13.59
16.15
0.32614
9.01009E-16
4.10619E-15
AADAT
5.65
3.52
-0.62738
7.50278E-18
3.79946E-17
AAED1
6.73
4.83
-0.34891
8.75385E-09
2.51516E-08
AAGAB
31.04
27.23
-0.06899
0.04800
0.06678
AAMDC
8.68
12.82
0.63080
8.77422E-09
2.51995E-08
AAR2
27.71
29.12
0.13867
4.23578E-05
8.76337E-05
Showing 1 to 10 of 9,808 entries
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Function Analysis of Target Genes of ACIN1
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AAMDC
77552064_77552106_77532174_77532287_77553524_77553674
0.00860
-0.159
DataSet_02_19
View details
ABCA8
66938079_66938180_66936898_66937103_66951359_66951492
0.00432
-0.333
DataSet_02_19
View details
ABCC1
16177222_16177399_16173208_16173335_16184261_16184445
0.00010
0.587
DataSet_02_19
View details
ABCC1
16180680_16180848_16173208_16173335_16184261_16184445
0.00103
0.235
DataSet_02_19
View details
ABCC6
16256849_16257049_16255294_16255421_16259479_16259790
0.00024
0.311
DataSet_02_19
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ABCD4
74762556_74762682_74760756_74761901_74763035_74763152
0.00007
0.363
DataSet_02_19
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ABHD17A
1878662_1878903_1877506_1877686_1879919_1880016
0.00027
-0.15
DataSet_02_19
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ABHD17A
1880894_1881047_1879919_1880114_1881233_1881803
0.00003
-0.175
DataSet_02_19
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ABHD3
19263880_19263926_19243638_19244191_19282276_19282459
0.00168
-0.106
DataSet_02_19
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ABRAXAS1
84405144_84405319_84403306_84403397_84406138_84406256
0.00023
-0.279
DataSet_02_19
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AC023509.1
53858543_53858636_53859715_53859757_53856276_53856351
0.00076
-0.077
DataSet_02_19
View details
ACAA1
38170780_38170879_38173086_38173129_38169276_38169357
0.00002
-0.436
DataSet_02_19
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ACP1
272036_272150_272191_272305_271865_271939
0.00296
0.072
DataSet_02_19
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ADAM15
155033890_155033965_155034379_155034451_155033238_155033308
0.00000
0.346
DataSet_02_19
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ADAM15
155033890_155033965_155034379_155034593_155033238_155033308
0.00041
0.296
DataSet_02_19
View details
ADAM15
155033893_155033965_155034379_155034451_155033238_155033308
0.00000
0.305
DataSet_02_19
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ADAM15
155033893_155033965_155034379_155034593_155033238_155033308
0.00010
0.312
DataSet_02_19
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ADAP2
29253844_29253936_29258906_29258986_29249957_29250088
0.00000
0.277
DataSet_02_19
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AKIRIN1
39463842_39463983_39466643_39466778_39456959_39457272
0.00033
-0.145
DataSet_02_19
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AL121594.3
35782086_35782265_35783566_35783661_35779945_35780101
0.00079
0.208
DataSet_02_19
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Showing 1 to 10 of 130 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AC008764.4
16770765_16770811_16770769_16770811_16770205_16770258
0.00299
-0.153
DataSet_02_19
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ADAM15
155034379_155034593_155034379_155034451_155034720_155034845
0.00005
0.314
DataSet_02_19
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ADD1
2906490_2906835_2906490_2906742_2909469_2909571
0.00681
-0.172
DataSet_02_19
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ADPRM
10608226_10608932_10608226_10608844_10609754_10609871
0.00582
0.298
DataSet_02_19
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ANAPC15
71822457_71822542_71822487_71822542_71822202_71822332
0.00398
0.089
DataSet_02_19
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ANAPC15
71823695_71823826_71823779_71823826_71822457_71822542
0.00761
-0.092
DataSet_02_19
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ANAPC4
25381995_25382101_25381995_25382067_25384882_25385015
0.00001
0.427
DataSet_02_19
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ANXA2
60688478_60688626_60688571_60688626_60678226_60678285
0.00043
0.322
DataSet_02_19
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ARHGAP11A
32921795_32921963_32921795_32921876_32925179_32925309
0.00000
-0.441
DataSet_02_19
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ARIH2
48962150_48962404_48962150_48962272_48964894_48965246
0.00310
0.08
DataSet_02_19
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Showing 1 to 10 of 237 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AARSD1
41108420_41108577_41108420_41108521_41109154_41109212
0.00001
0.573
DataSet_02_19
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ABCC5
183703091_183703243_183703091_183703166_183705557_183705705
0.00001
0.364
DataSet_02_19
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ABCD4
74759856_74759982_74759856_74759951_74761850_74761901
0.00019
-0.576
DataSet_02_19
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ABCD4
74759856_74760013_74759856_74759951_74761850_74761901
0.00000
-0.848
DataSet_02_19
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AC025171.2
43044494_43045370_43044800_43045370_43042234_43043669
0.00007
0.333
DataSet_02_19
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ACD
67691664_67691756_67691664_67691717_67691888_67692265
0.00530
0.109
DataSet_02_19
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ACIN1
23533313_23533466_23533313_23533430_23533563_23533694
0.00233
-0.396
DataSet_02_19
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ACTG1
79478213_79478829_79478213_79478652_79478928_79479168
0.00975
-0.139
DataSet_02_19
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ADA
43251469_43251719_43251469_43251571_43252842_43252970
0.00984
-0.051
DataSet_02_19
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ADAP2
29253826_29253936_29253844_29253936_29249957_29250088
0.00001
-0.206
DataSet_02_19
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ABHD14A-ACY1
52020430_52021077_52020430_52020520_52020620_52021077
0.00636
-0.277
DataSet_02_19
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ABHD14B
52005475_52005908_52005475_52005714_52005827_52005908
0.00273
0.092
DataSet_02_19
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AC008429.1
172384156_172385260_172384156_172384305_172385141_172385260
0.00122
-0.278
DataSet_02_19
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ACTR3
114709296_114713283_114709296_114709422_114713199_114713283
0.00431
-0.244
DataSet_02_19
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AHSA2
61412636_61413632_61412636_61412753_61413580_61413632
0.00427
-0.467
DataSet_02_19
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ALKBH6
36503922_36504324_36503922_36503991_36504211_36504324
0.00251
-0.481
DataSet_02_19
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AP1G2
24032792_24033065_24032792_24032818_24032924_24033065
0.00799
0.194
DataSet_02_19
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AP3B2
83357487_83357984_83357487_83357583_83357909_83357984
0.00064
0.486
DataSet_02_19
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AP3D1
2109084_2109957_2109084_2109124_2109871_2109957
0.00001
0.196
DataSet_02_19
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APEX1
20923736_20924260_20923736_20923932_20924072_20924260
0.00370
0.133
DataSet_02_19
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Differential Variants in RNA (DVRs)
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Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
chr1
91486838
G
C
0.00370
ZNF644
-
FALSE
chr1
3545189
T
G
0.00027
TPRG1L
+
FALSE
chr1
16957414
C
T
0.00708
.
FALSE
chr1
9328242
A
G
0.00018
H6PD
+
TRUE
AluJr
SINE,Alu
chr1
32799512
A
T
0.00929
MARCKSL1
-
FALSE
chr1
93826609
T
G
0.00073
DR1
+
FALSE
chr1
10518875
T
C
0.00127
.
FALSE
AluSx1
SINE,Alu
chr1
145311900
C
T
0.00011
NBPF20,NBPF10
+
FALSE
chr1
10440643
A
G
0.00055
KIF1B
+
TRUE
AluSx
SINE,Alu
chr1
38327584
T
C
0.00017
INPP5B
-
TRUE
AluSx3
SINE,Alu
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Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression