RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	26161107	A	T	0.00022	AUNIP	-	FALSE	AluSc8	SINE,Alu
chr1	21100856	A	C	0.00010	HP1BP3	-	FALSE	(AC)n	SINE,Alu
chr1	82453022	A	G	0.00532	ADGRL2	+	FALSE
chr1	54871709	T	C	0.00110	SSBP3	-	FALSE
chr3	195415462	G	A	0.00140	LINC00969,SDHAP2	+	FALSE
chr2	98090925	T	C	0.00056	LOC100506076	-	FALSE	L1PREC2	SINE,Alu
chr1	230415244	T	C	0.00360	GALNT2	+	FALSE
chr1	53291425	A	G	0.00517	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	138156	G	T	0.00140	LOC729737	-	FALSE
chr1	229631734	T	C	0.00611	NUP133	-	FALSE
chr2	28639641	C	G	0.00431		.	FALSE
chr1	235612219	T	A	0.00148	TBCE,B3GALNT2	+,-	FALSE
chr19	42376710	A	G	1.82395E-05		.	FALSE	AluSp	SINE,Alu
chr1	1647814	T	C	0.00123	CDK11B,CDK11A	-	FALSE
chr15	63445744	A	T	0.00539	RPS27L	-	FALSE
chr3	100043289	C	T	0.00049	TBC1D23	+	FALSE
chr3	57542173	C	T	0.00020	PDE12	+	FALSE
chr17	65335477	T	C	2.02482E-05	PSMD12	-	TRUE	AluSx	SINE,Alu
chr12	21015760	G	A	0.00758	SLCO1B3	+	FALSE
chr1	16890130	A	C	0.00753	NBPF1	-	FALSE
chr1	10517313	T	C	0.00661		.	FALSE	AluJr	SINE,Alu
chr6	71298639	A	G	0.00339		.	FALSE	AluSp	SINE,Alu
chr19	45406536	G	T	0.00518	TOMM40	+	FALSE
chr1	23636275	G	T	0.00258	HNRNPR	-	FALSE
chr19	42376711	A	G	0.00223		.	FALSE	AluSp	SINE,Alu
chr1	1337737	G	C	2.51903E-05	MRPL20	-	FALSE
chr5	175816758	T	A	0.00528		.	FALSE
chr2	220370192	C	T	0.00055	GMPPA	+	FALSE
chr11	490771	C	T	0.00600	PTDSS2	+	FALSE
chr12	27574182	G	C	0.00014	ARNTL2,ARNTL2-AS1	+,-	FALSE
chr9	124094998	T	G	0.00299	GSN	+	FALSE	(TG)n	SINE,Alu
chr3	128215735	G	A	0.00734	GATA2-AS1	+	FALSE
chr3	17201871	T	C	0.00626	TBC1D5	-	FALSE
chr2	204300093	A	C	0.00105	RAPH1	-	FALSE	FLAM_C	SINE,Alu
chr1	145369480	A	G	7.08400E-07	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr2	37328016	T	C	0.00473		.	FALSE
chr1	6282371	T	C	0.00013	ICMT	-	TRUE	AluSz	SINE,Alu
chr5	141690819	G	A	0.00062	SPRY4	-	FALSE
chr2	75882576	T	C	0.00328	MRPL19	+	FALSE
chr2	11674374	A	G	0.00559	GREB1	+	FALSE	Tigger9b	SINE,Alu
chr14	69704553	G	T	7.62587E-05	EXD2	+	FALSE
chr1	206566195	C	T	7.54522E-05	SRGAP2	+	FALSE
chr2	38971644	T	G	0.00239	SRSF7	-	FALSE
chr1	39989926	T	C	0.00354	BMP8A,PPIEL	+,-	FALSE
chr19	9672979	T	C	0.00028		.	FALSE	AluSx3	SINE,Alu
chr1	247319489	G	A	0.00729	ZNF124	-	FALSE
chr1	145360700	C	T	0.00134	NBPF20,NBPF10	+	FALSE
chr1	26801736	A	T	0.00578	HMGN2	+	FALSE	(T)n	SINE,Alu
chr1	182569318	G	T	0.00101	RGS16	-	FALSE
chr4	88814756	C	T	0.00145		.	FALSE
chr1	11084103	T	A	0.00044	TARDBP	+	FALSE
chr5	140240514	A	G	0.00151	PCDHA1,PCDHA2,PCDHA3,PCDHA4,PCDHA5,PCDHA6,PCDHA7,PCDHA8,PCDHA9,PCDHA10	+	FALSE	AluY	SINE,Alu
chr4	95173779	T	C	0.00771	SMARCAD1	+	FALSE
chr3	155658362	C	T	0.00807		.	FALSE	MIR3	SINE,Alu
chr1	10520683	T	C	0.00058	DFFA	-	TRUE	AluSc8	SINE,Alu
chr15	91044379	T	G	0.00440	IQGAP1	+	FALSE
chr1	207943285	A	G	0.00011	CD46	+	TRUE	AluSx1	SINE,Alu
chr1	9162223	T	C	0.00586		.	FALSE	AluSx	SINE,Alu
chr3	24019987	A	C	0.00563	NR1D2	+	FALSE
chr3	10322331	C	G	0.00180	TATDN2	+	FALSE
chr3	64081236	T	C	8.95068E-05	PRICKLE2,PRICKLE2-AS1	+,-	FALSE
chr1	1337734	C	T	3.46713E-05	MRPL20	-	FALSE
chr8	144940327	G	A	0.00989	EPPK1	-	FALSE
chr19	36260451	A	G	0.00854		.	FALSE	AluY	SINE,Alu
chr2	112874290	A	T	0.00455	TMEM87B	+	FALSE
chr2	101622881	C	A	1.48865E-05	RPL31	+	FALSE
chr3	40578997	A	G	0.00094	ZNF621	+	TRUE	AluJr	SINE,Alu
chr7	44841236	G	A	0.00819	PPIA	+	FALSE
chr1	19585772	G	A	0.00576	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr5	95130802	A	T	0.00123	RHOBTB3	+	FALSE	AluSz	SINE,Alu
chr1	10520076	T	C	0.00763		.	FALSE	AluSx	SINE,Alu
chr1	59122871	C	T	0.00863	MYSM1	-	FALSE
chr1	10519947	T	C	0.00323		.	FALSE	AluJr	SINE,Alu
chr1	36770064	T	C	0.00086	THRAP3	+	FALSE	(T)n	SINE,Alu
chr7	75145495	G	A	5.48132E-07	PMS2P3	-	FALSE
chr1	146495576	G	C	0.00107	LOC728989	-	FALSE
chr5	31554465	A	T	1.69098E-06	C5orf22	+	FALSE
chr1	11347150	C	A	0.00016	UBIAD1	+	FALSE
chr17	49042381	T	C	0.00931	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	68168152	C	T	0.00258	GNG12	-	FALSE
chr2	37431521	A	G	0.00783	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr2	129024408	G	A	0.00502	HS6ST1	-	FALSE
chr1	36067925	T	C	2.33961E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr4	13604418	G	C	2.95746E-07	BOD1L1	-	FALSE
chr6	31657413	T	C	0.00066		.	FALSE
chr1	179077613	T	C	0.00731	ABL2	-	FALSE
chr1	64125439	A	C	3.63698E-07	PGM1	+	FALSE
chr1	214525603	A	G	0.00047	PTPN14	-	FALSE
chr2	61764895	C	A	0.00862	XPO1	-	FALSE	(AC)n	SINE,Alu
chr2	241825926	T	C	7.75373E-05	C2orf54	-	FALSE
chr3	46623292	T	C	0.00408	TDGF1	+	FALSE	AluSx3	SINE,Alu
chr4	10076658	T	C	6.66134E-16	WDR1	-	FALSE
chr16	89623607	A	G	0.00915	SPG7	+	FALSE
chr1	1647871	T	C	7.46571E-06	CDK11B,CDK11A	-	FALSE
chr1	32479707	G	A	0.00000	KHDRBS1	+	FALSE
chr1	16932912	T	C	0.00525	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	10520702	T	C	0.00883	DFFA	-	TRUE	AluSc8	SINE,Alu
chr2	3592638	T	C	0.00164	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr14	74526154	T	C	0.00126	BBOF1,ALDH6A1	+,-	FALSE	AluSp	SINE,Alu
chr14	65400786	T	G	0.00077	CHURC1-FNTB,CHURC1	+	FALSE	AluSx	SINE,Alu
chr3	48485381	T	C	0.00103	TMA7	+	FALSE
chr1	214529170	T	C	0.00120	PTPN14	-	TRUE
chr1	144822920	A	T	0.00040	NBPF20,NBPF9	+	FALSE
chr17	41144250	G	T	0.00025	RUNDC1	+	FALSE
chr2	160659996	G	A	0.00177	LY75-CD302,LY75	-	FALSE
chr1	109535120	G	A	6.51608E-07	WDR47	-	FALSE
chr2	20450819	T	C	0.00807	PUM2	-	TRUE
chr14	53243411	T	C	0.00028	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr1	11783889	A	G	0.00746		.	FALSE	AluSq	SINE,Alu
chr6	36894339	G	A	0.00650	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr7	21941587	G	C	5.72060E-05	CDCA7L	-	FALSE
chr2	120022385	C	T	0.00184	STEAP3	+	FALSE
chr1	3545186	T	G	0.00314	TPRG1L	+	FALSE
chr1	67874696	T	C	0.00012	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	45722381	A	G	0.00996	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	8072233	T	C	0.00647	ERRFI1	-	FALSE
chr1	150199123	G	T	0.00625	ANP32E	-	FALSE
chr6	3114457	C	T	0.00320	RIPK1	+	FALSE
chr1	17287301	A	G	0.00104	CROCC	+	FALSE
chr12	125511312	A	G	0.00638	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	114306374	G	A	0.00124	RSBN1	-	FALSE
chr1	109818159	G	T	0.00419	CELSR2	+	FALSE
chr1	53291434	A	G	0.00318	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr2	203743821	T	C	0.00880		.	FALSE	AluSx3	SINE,Alu
chr1	36186320	T	C	0.00281		.	FALSE	AluSg	SINE,Alu
chr7	44918804	T	C	0.00015	PURB	-	TRUE	AluSg	SINE,Alu
chr14	75202412	A	G	5.03546E-10	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	16890130	A	C	0.00412	NBPF1	-	FALSE
chr12	7175047	A	G	0.00634	C1S	+	FALSE
chr1	10519947	T	C	0.00534		.	FALSE	AluJr	SINE,Alu
chr3	178954055	T	C	0.00308	PIK3CA	+	FALSE
chr16	88709698	C	T	0.00330	CYBA	-	FALSE
chr1	6583383	T	C	0.00305	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	44088117	G	T	0.00584	PTPRF	+	FALSE	(T)n	SINE,Alu
chr3	45748599	T	A	0.00470	SACM1L	+	FALSE
chr1	19586520	A	G	0.00659	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	26774224	A	G	0.00349	DHDDS	+	TRUE	AluSz6	SINE,Alu
chr3	40577761	A	G	0.00701	ZNF621	+	TRUE	AluSz	SINE,Alu
chr4	57326873	A	G	0.00342	PAICS	+	TRUE	AluSx1	SINE,Alu
chr5	125961509	A	G	0.00141	PHAX	+	TRUE	AluSz6	SINE,Alu
chr17	4840811	A	G	0.00554	SLC25A11	-	FALSE
chr3	45267321	C	T	0.00059	TMEM158	-	FALSE
chr1	145283986	C	T	0.00814	NBPF20,NOTCH2NL	+	FALSE
chr1	156564726	T	C	0.00995	GPATCH4	-	FALSE
chr12	125512494	A	G	0.00427		.	FALSE	AluY	SINE,Alu
chr1	62164735	C	T	0.00016	TM2D1	-	FALSE	AluJb	SINE,Alu
chr1	36067752	T	C	9.44020E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	149913513	T	C	0.00495	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr9	131872857	C	G	0.00151	CRAT	-	FALSE
chrX	123046772	A	G	0.00548	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	145283718	G	A	0.00897	NBPF20,NOTCH2NL	+	FALSE
chr4	76568676	T	A	0.00051	G3BP2	-	FALSE
chr1	1647893	C	T	0.00509	CDK11B,CDK11A	-	FALSE
chr1	20976075	T	C	0.00351	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	145284883	A	G	0.00062	NBPF20,NOTCH2NL	+	FALSE	L2a	SINE,Alu
chr4	155456608	A	G	0.00734	PLRG1	-	FALSE	L1MC5	SINE,Alu
chr1	113672569	A	G	0.00674		.	FALSE	AluJb	SINE,Alu
chr22	18572597	A	G	0.00322	PEX26	+	TRUE	AluYf1	SINE,Alu
chr1	3371371	C	G	0.00844	ARHGEF16	+	FALSE
chr1	28825337	A	G	0.00167	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr2	232319611	A	T	3.84700E-07	NCL	-	FALSE
chr19	33470874	A	G	0.00119	RHPN2	-	FALSE
chr6	46128910	A	G	0.00782	ENPP5	-	FALSE	(GT)n	SINE,Alu
chr1	27205359	T	C	3.58613E-05		.	FALSE	AluSc	SINE,Alu
chr1	212277618	T	G	0.00173	DTL	+	FALSE
chr2	99813015	A	G	0.00235	MRPL30	+	TRUE	AluJb	SINE,Alu
chr3	111732608	G	A	2.81327E-08	TAGLN3	+	FALSE
chr1	38182333	G	T	0.00063	EPHA10	-	FALSE	L2d2	SINE,Alu
chr15	85185045	T	C	0.00210	WDR73,SCAND2P	+,-	FALSE	AluSz	SINE,Alu
chr1	148556784	G	A	0.00543		.	FALSE
chr13	47345467	G	T	0.00495	ESD	-	FALSE
chr7	143003517	T	A	0.00251	CASP2	+	FALSE	AluY	SINE,Alu
chr1	95362514	G	T	0.00658	CNN3	-	FALSE
chr1	94930345	G	A	1.57139E-05	ABCD3	+	FALSE
chr3	49315592	T	C	0.00127	USP4	-	FALSE
chr9	70483778	A	T	0.00026	CBWD5	-	FALSE
chr2	206983255	T	C	0.00246		.	FALSE	AluJb	SINE,Alu
chr1	86049391	T	A	0.00019	CYR61	+	FALSE
chr1	16893686	G	C	0.00171	NBPF1	-	FALSE
chr1	206516261	C	T	0.00228	SRGAP2	+	FALSE
chr3	101284940	T	C	1.85568E-05	TRMT10C	+	FALSE
chr1	94032944	C	T	0.00147	BCAR3	-	FALSE
chr1	118408218	C	A	0.00857	GDAP2	-	FALSE
chr2	32532809	A	G	0.00255		.	FALSE	AluSx1	SINE,Alu
chr19	1981317	T	A	0.00539	CSNK1G2	+	FALSE
chr9	115447533	T	C	0.00326	INIP	-	TRUE	AluJb	SINE,Alu
chr2	203742141	T	C	0.00044		.	FALSE	AluJb	SINE,Alu
chrX	77083955	T	C	0.00065	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	52882970	A	G	0.00533	PRPF38A	+	FALSE
chr14	19684445	A	G	0.00351	DUXAP10	+	FALSE
chr8	37613106	T	C	0.00626	ERLIN2	+	FALSE
chr5	9549459	A	G	0.00783	SNHG18	+	FALSE
chr5	79279310	T	A	0.00173	MTX3	-	FALSE
chr3	73115390	C	T	0.00462	PPP4R2	+	FALSE	(AT)n	SINE,Alu
chr2	70316226	A	C	0.00426	PCBP1	+	FALSE
chr19	59095573	A	G	0.00169	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr1	36067811	T	C	0.00439	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	44072066	C	T	0.00846	PTPRF	+	FALSE
chr3	45721990	A	G	0.00022	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	16918486	C	T	0.00415	NBPF1	-	FALSE
chr1	38174987	T	C	0.00032	CDCA8	+	FALSE
chr1	6730782	C	T	0.00807	DNAJC11	-	FALSE
chr1	42886523	T	C	0.00649	RIMKLA	+	FALSE	MIRc	SINE,Alu
chr1	40539212	C	A	0.00380	PPT1	-	FALSE
chr1	43272841	A	T	0.00029	SVBP	-	FALSE
chr1	16932912	T	C	0.00808	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	10519982	T	C	3.22355E-05		.	FALSE	AluJr	SINE,Alu
chr1	228520973	C	G	0.00875	OBSCN	+	FALSE
chr3	73116347	T	A	0.00109	PPP4R2	+	FALSE
chr3	45721990	A	G	0.00779	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr4	142945451	T	C	0.00585		.	FALSE
chr2	203742188	T	C	0.00522		.	FALSE	AluJb	SINE,Alu
chr1	179072966	C	T	0.00107	ABL2	-	FALSE	MIRc	SINE,Alu
chr2	85776644	T	C	0.00127	GGCX	-	TRUE	AluSz6	SINE,Alu
chr1	36067925	T	C	3.39837E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	68402794	T	G	0.00630	PNO1	+	FALSE
chr1	9645101	C	T	0.00726		.	FALSE	(ATATTC)n	SINE,Alu
chr17	57279258	A	G	0.00095	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	10519787	A	T	0.00037		.	FALSE	(A)n	SINE,Alu
chr4	57326126	A	G	0.00017	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	85785548	C	T	0.00350	DDAH1	-	FALSE
chr5	40852810	G	T	0.00276	CARD6	+	FALSE
chr1	179326418	A	G	0.00626	SOAT1	+	TRUE	AluSg	SINE,Alu
chr3	197611095	A	G	0.00694		.	FALSE	AluSx1	SINE,Alu
chr1	53712570	A	C	0.00277	LRP8	-	FALSE	(CA)n	SINE,Alu
chr12	9464349	A	C	0.00042	LOC642846	+	FALSE
chr8	144681777	G	T	0.00383	TIGD5	+	FALSE
chr1	9163502	T	C	0.00366		.	FALSE	AluSp	SINE,Alu
chr1	201438097	G	C	2.75480E-05	PHLDA3	-	FALSE
chr1	1717439	T	A	0.00663	GNB1	-	FALSE
chr4	164245873	T	A	0.00014	NPY1R	-	FALSE
chr1	23636277	A	T	0.00632	HNRNPR	-	FALSE
chr3	49067308	G	A	0.00278	QRICH1	-	FALSE
chr5	17276078	C	A	0.00011	BASP1	+	FALSE	(TC)n	SINE,Alu
chr3	182639121	A	G	0.00048	ATP11B	+	FALSE
chr1	144931392	G	A	0.00172	NBPF20,PDE4DIP	+,-	FALSE
chr1	168213597	A	G	0.00481		.	FALSE	AluSx1	SINE,Alu
chr1	161488402	T	A	0.00083	FCGR2A	+	FALSE
chr1	25169634	A	G	0.00843	CLIC4	+	FALSE
chr17	79838088	T	C	6.81311E-05		.	FALSE	AluSx	SINE,Alu
chr1	93298756	T	C	0.00264	FAM69A,RPL5	+,-	FALSE	MER5C	SINE,Alu
chr1	6283264	T	C	0.00378	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	16912099	G	C	0.00928	NBPF1	-	FALSE
chr3	41281388	T	G	0.00720	CTNNB1	+	FALSE
chr7	127941334	C	T	0.00440	MGC27345	-	FALSE	MIR3	SINE,Alu
chr5	118174745	T	C	0.00084	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	28826023	A	G	0.00143	PHACTR4	+	FALSE	AluJb	SINE,Alu
chr1	28826118	A	G	0.00039	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	1345051	A	G	0.00362		.	FALSE	AluSg	SINE,Alu
chr4	57327058	A	G	0.00129	PAICS	+	TRUE	AluSx1	SINE,Alu
chr3	69154081	G	A	0.00999	ARL6IP5	+	FALSE
chr1	10518052	T	C	0.00179		.	FALSE	AluJr	SINE,Alu
chr1	6259025	C	T	0.00700	RPL22	-	FALSE
chr6	29910557	T	A	0.00196		.	FALSE
chr8	11701297	T	C	0.00288	CTSB	-	TRUE	AluSx1	SINE,Alu
chr7	128142395	A	C	0.00300	METTL2B	+	FALSE
chr3	100083425	G	A	0.00717	TOMM70	-	FALSE	FAM	SINE,Alu
chr1	161184091	A	G	0.00794	NDUFS2	+	FALSE
chr2	206986291	T	C	0.00143		.	FALSE	AluSz	SINE,Alu
chr1	16889414	T	C	0.00012	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	9161218	T	C	0.00641		.	FALSE	AluSx	SINE,Alu
chr1	10520153	T	C	0.00398		.	FALSE	AluSx	SINE,Alu
chr1	93811476	G	C	0.00663		.	FALSE
chr1	1469546	G	A	0.00300	ATAD3A	+	FALSE
chr1	144481235	A	G	1.18230E-05	NBPF20	+	FALSE
chr2	105963597	C	T	0.00898	C2orf49	+	FALSE
chr6	31322980	C	T	0.00091		.	FALSE
chr3	10168802	A	G	6.92223E-05	BRK1	+	FALSE
chr1	109856378	C	A	0.00804	SORT1	-	FALSE
chr6	74134823	T	C	0.00305		.	FALSE	AluSz	SINE,Alu
chr1	19071752	T	C	0.00503	PAX7	+	FALSE
chr1	11783106	A	G	0.00022		.	FALSE	AluSx	SINE,Alu
chr1	53291435	A	G	0.00049	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr6	24720539	G	C	0.00225		.	FALSE
chr2	47387307	G	T	0.00035	CALM2	-	FALSE
chr8	143744556	T	C	0.00586	JRK	-	TRUE	AluJr	SINE,Alu
chr7	156764350	G	C	0.00415	NOM1	+	FALSE
chr6	153314040	G	A	0.00041	MTRF1L	-	FALSE
chr1	38279683	A	T	0.00685	MTF1	-	FALSE
chr1	145512098	A	G	0.00707	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	34080819	A	C	0.00815	LINC01317	+	FALSE	MSTD	SINE,Alu
chr1	28567501	A	G	0.00887		.	FALSE
chr3	126752934	T	C	0.00038	PLXNA1	+	FALSE
chr1	15668319	G	A	0.00489	FHAD1	+	FALSE
chr7	2294401	A	G	0.00035	SNX8	-	FALSE
chr15	42503336	C	T	0.00916	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr1	33148635	A	G	5.38540E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr5	149363219	A	G	0.00866	SLC26A2	+	FALSE	AluJr	SINE,Alu
chr4	77997064	A	G	0.00283	CCNI	-	FALSE	(A)n	SINE,Alu
chr1	142660333	G	A	8.80387E-05		.	FALSE
chr1	179042687	A	G	0.00782	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	16890639	C	T	8.47214E-05	NBPF1	-	FALSE
chr4	120982045	T	C	0.00293	MAD2L1	-	FALSE
chr1	32801724	T	G	0.00816	MARCKSL1	-	FALSE
chr1	227211026	C	G	0.00373	CDC42BPA	-	FALSE
chr2	75888160	A	C	0.00368	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr4	57326875	A	G	1.03861E-05	PAICS	+	TRUE	AluSx1	SINE,Alu
chr4	120378207	A	G	8.04303E-06	LOC645513	+	FALSE
chr1	27216740	G	A	0.00801	GPN2	-	FALSE
chr19	53155567	T	C	0.00137	ZNF83	-	TRUE	AluSg	SINE,Alu
chr1	206566948	G	A	0.00879	SRGAP2	+	FALSE
chr1	45975269	A	G	0.00827	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	212459257	A	G	0.00068	PPP2R5A	+	FALSE
chr15	65442523	G	A	0.00068	CLPX	-	FALSE	AluSg4	SINE,Alu
chr1	16928622	C	A	0.00197	NBPF1	-	FALSE
chr17	48771484	C	A	0.00737	ANKRD40	-	FALSE	AluSz	SINE,Alu
chr7	17384395	A	G	1.20082E-06	AHR	+	TRUE	AluSx	SINE,Alu
chr3	10193475	A	G	0.00295	VHL	+	TRUE	AluJr	SINE,Alu
chr1	36067749	T	C	0.00748	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	63924020	C	T	0.00945	ITGB3BP	-	FALSE
chr2	190617700	T	C	1.38394E-05	OSGEPL1	-	FALSE
chr1	179327011	A	G	0.00930	SOAT1	+	TRUE
chr1	145291217	C	T	0.00415	NBPF20	+	FALSE
chr17	73703945	C	T	0.00242	SAP30BP	+	FALSE	MIRc	SINE,Alu
chr1	92862804	A	G	0.00043		.	FALSE	AluJr	SINE,Alu
chr4	1228741	G	A	0.00095	CTBP1	-	FALSE
chr1	205687358	T	C	0.00432	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr12	98943162	A	G	5.01524E-05	TMPO	+	TRUE	AluSz	SINE,Alu
chrX	24095325	A	G	7.48023E-10	EIF2S3	+	TRUE	AluSx	SINE,Alu
chr1	36530674	A	G	0.00603		.	FALSE	AluSg	SINE,Alu
chr3	125248854	A	C	0.00014	OSBPL11	-	FALSE
chr5	72801321	T	A	0.00427	BTF3	+	FALSE
chr1	52817393	T	C	0.00139	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr1	19543973	T	C	0.00236	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr4	39551975	T	C	5.31269E-07	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr2	68402796	C	T	0.00656	PNO1	+	FALSE
chr12	52710721	G	C	0.00519	KRT83	-	FALSE
chr1	120539691	G	T	0.00350	NOTCH2	-	FALSE
chr5	37290554	T	C	7.20052E-07		.	FALSE	AluSz	SINE,Alu
chr1	16889642	T	C	6.70250E-05	NBPF1	-	TRUE
chr1	52253793	C	T	0.00966	OSBPL9	+	FALSE
chr15	63111739	T	C	0.00914	TLN2	+	FALSE
chr1	142688506	T	C	4.54862E-05		.	FALSE
chr1	12401868	A	C	0.00526	VPS13D	+	FALSE
chr2	61764920	C	A	0.00363	XPO1	-	FALSE
chr2	27315252	G	A	0.00377	KHK	+	FALSE
chr1	144618144	A	G	0.00725	NBPF20,NBPF9	+	FALSE
chr3	33430397	C	T	0.00171	UBP1	-	FALSE
chr2	73339708	G	A	0.00991	RAB11FIP5	-	FALSE
chr5	43377390	T	C	0.00062	CCL28	-	TRUE	AluSz	SINE,Alu
chr1	25570565	G	A	0.00094	RSRP1	-	FALSE	Alu	SINE,Alu
chr1	36068370	T	C	0.00789	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	144821986	C	T	0.00218	NBPF20,NBPF9	+	FALSE
chr1	118472402	T	G	0.00342	WDR3	+	FALSE
chr1	16576290	G	A	0.00104	FBXO42	-	FALSE	A-rich	SINE,Alu
chr11	32625925	A	G	0.00845	CCDC73	-	FALSE	AluJb	SINE,Alu
chr1	35644503	T	A	0.00551	SFPQ	-	FALSE
chr12	109887765	T	G	0.00091	KCTD10	-	FALSE
chr6	74134673	T	C	0.00340		.	FALSE	AluSz	SINE,Alu
chr1	10517958	G	A	0.00149		.	FALSE
chr2	220404381	A	G	0.00268	CHPF	-	FALSE
chr1	10044366	A	G	0.00958	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr20	57603729	A	T	0.00444		.	FALSE
chr2	70506338	C	T	0.00026	PCYOX1	+	FALSE
chr1	20978024	C	A	0.00175	PINK1-AS	-	FALSE
chr1	200558363	T	C	1.35174E-05	KIF14	-	FALSE
chr1	160967856	T	C	0.00116	F11R	-	TRUE	AluSp	SINE,Alu
chr3	192515557	G	A	0.00130	MB21D2	-	FALSE
chr2	101622888	T	A	0.00210	RPL31	+	FALSE
chr4	68483513	G	A	3.54156E-05	UBA6	-	FALSE
chr3	93846831	G	A	0.00547		.	FALSE	AluSq2	SINE,Alu
chr19	42376872	A	G	0.00647		.	FALSE	AluSp	SINE,Alu
chr4	2940462	T	C	6.45116E-07	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	36603290	C	T	0.00948	TRAPPC3	-	FALSE
chrX	54587254	A	G	0.00019	GNL3L	+	TRUE	AluSq2	SINE,Alu
chr1	46075715	A	G	0.00401	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	6683578	T	C	0.00497	PHF13	+	FALSE
chr1	149943157	G	A	0.00060	OTUD7B	-	FALSE
chr2	204162036	A	G	0.00369	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr5	68505909	A	G	0.00178	CENPH	+	TRUE	AluSx3	SINE,Alu
chr6	38140503	C	T	0.00065	BTBD9	-	FALSE
chr9	115447527	T	C	0.00200	INIP	-	TRUE	AluJb	SINE,Alu
chr1	27992825	G	A	0.00192	IFI6	-	FALSE
chr4	17803578	T	C	0.00712	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	16912029	C	G	0.00831	NBPF1	-	FALSE
chr1	154554965	G	A	0.00019	ADAR	-	FALSE
chr1	52817399	T	C	0.00346	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr2	30863651	A	T	0.00366	LCLAT1	+	FALSE
chr1	10517527	T	C	0.00453		.	FALSE	AluSx1	SINE,Alu
chr3	120113286	C	T	1.47726E-06	FSTL1	-	FALSE
chr1	45120664	C	T	0.00437	TMEM53	-	FALSE
chr10	13320110	T	C	0.00193	PHYH	-	FALSE
chr1	59120961	G	A	0.00383	MYSM1	-	FALSE
chr1	19586135	C	T	0.00063	MRTO4	+	FALSE
chr1	35817022	T	A	0.00072	ZMYM4	+	FALSE
chr17	46941448	G	T	0.00017	CALCOCO2	+	FALSE	AluSz6	SINE,Alu
chr1	10519982	T	C	0.00129		.	FALSE	AluJr	SINE,Alu
chr1	61922059	C	A	0.00132	NFIA	+	FALSE	(A)n	SINE,Alu
chr2	55255313	T	A	0.00675	RTN4	-	FALSE
chr14	53243394	T	C	0.00957	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr1	119574537	G	A	0.00935	WARS2	-	FALSE
chr1	47142538	G	A	0.00870	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr1	46076467	A	G	0.00118	NASP	+	TRUE	AluSx	SINE,Alu
chr2	55516902	G	A	0.00011	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr3	48787042	T	C	0.00799	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr5	139931630	A	T	0.00052	SRA1	-	FALSE
chr1	94982784	T	A	0.00179	ABCD3	+	FALSE
chr2	23926233	C	T	0.00907	KLHL29	+	FALSE
chr3	15113799	T	C	0.00200	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	19953124	G	A	0.00137	MINOS1,MINOS1-NBL1	+	FALSE
chr11	8707395	C	A	9.51875E-07	RPL27A	+	FALSE
chr4	88061645	T	A	0.00049	AFF1	+	FALSE	(TATAT)n	SINE,Alu
chr6	158505088	A	G	0.00083	SYNJ2	+	FALSE
chr1	569874	C	T	0.00076		.	FALSE
chr1	78029905	T	A	0.00256	ZZZ3	-	FALSE
chr8	143763622	C	T	0.00470	PSCA	+	FALSE
chr20	62598815	C	T	0.00711	ZNF512B	-	FALSE
chr1	52817432	T	C	0.00518	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr1	38280010	C	T	0.00393	MTF1	-	FALSE
chr17	45195951	T	C	0.00011	CDC27	-	TRUE	MADE1	SINE,Alu
chr3	73115786	T	C	0.00470	PPP4R2	+	FALSE
chr3	197611758	A	G	0.00958		.	FALSE	FLAM_C	SINE,Alu
chr4	1205680	C	A	0.00247	CTBP1-AS,CTBP1	+,-	FALSE
chr1	33066960	A	G	0.00079	ZBTB8A	+	TRUE	AluSq4	SINE,Alu
chr1	53288894	A	G	0.00066	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr3	33893987	A	G	0.00123	PDCD6IP	+	FALSE
chr6	42856029	A	G	0.00099	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr8	144827207	A	T	0.00038	FAM83H-AS1	+	FALSE	ERVL-B4-int	SINE,Alu
chr2	102484482	G	A	0.00213	MAP4K4	+	FALSE
chr1	26608012	C	A	0.00564	SH3BGRL3	+	FALSE
chr1	31905884	G	A	2.48126E-05	SERINC2	+	FALSE
chr16	29454297	T	C	0.00104	SMG1P6,BOLA2-SMG1P6	-	TRUE	Tigger4a	SINE,Alu
chr16	8902411	A	G	0.00357	PMM2	+	FALSE
chr1	33071096	A	G	0.00139	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	11159823	T	C	0.00186	EXOSC10,LOC105376736	+,-	FALSE
chr3	156259308	T	C	0.00013	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	85785548	C	T	0.00353	DDAH1	-	FALSE
chr7	138732191	T	C	0.00746	ZC3HAV1	-	TRUE	MER5B	SINE,Alu
chr1	53292607	T	A	2.07283E-05	ZYG11B	+	FALSE
chr1	10518688	T	C	0.00154		.	FALSE	AluSx1	SINE,Alu
chr20	18469048	T	C	0.00213	RBBP9	-	TRUE	AluJr	SINE,Alu
chr5	37291482	T	C	0.00146		.	FALSE	AluSx3	SINE,Alu
chr2	143638992	T	A	0.00089	KYNU	+	FALSE
chr1	16133912	T	C	0.00126	UQCRHL	-	TRUE
chr1	86817074	G	T	9.65311E-06	ODF2L	-	FALSE	L1PA7	SINE,Alu
chr1	109535088	G	A	0.00353	WDR47	-	FALSE
chr20	29631627	T	C	0.00040	FRG1BP	+	FALSE
chr7	20178420	T	C	0.00053	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr3	185646406	A	T	0.00023	TRA2B	-	FALSE
chr19	7084638	A	G	0.00508	ZNF557	+	TRUE	AluJb	SINE,Alu
chr1	223967953	C	T	0.00341	TP53BP2	-	FALSE
chr2	101893244	C	A	0.00332	RNF149	-	FALSE	(A)n	SINE,Alu
chr1	10520331	C	T	0.00527		.	FALSE	AluSx1	SINE,Alu
chr1	85785552	T	C	0.00334	DDAH1	-	FALSE
chr11	6703160	A	T	0.00111	MRPL17	-	FALSE
chr2	143638998	G	A	0.00496	KYNU	+	FALSE
chr2	136541076	C	A	0.00211	UBXN4	+	FALSE
chr2	172179003	T	C	0.00192	METTL8	-	TRUE	AluY	SINE,Alu
chr1	1570919	C	T	0.00161	CDK11B	-	FALSE
chr16	81064533	A	G	0.00686	CENPN	+	TRUE	AluSg	SINE,Alu
chr2	105881486	A	G	0.00042	TGFBRAP1	-	FALSE
chr1	15993714	T	A	0.00066		.	FALSE
chr4	761850	T	C	0.00026	PCGF3	+	FALSE
chr2	61277798	A	G	0.00077	PEX13	+	TRUE	AluY	SINE,Alu
chr2	28635740	T	C	0.00358	FOSL2	+	FALSE
chr1	120163007	G	A	0.00573	ZNF697	-	FALSE
chr1	10518052	T	C	0.00791		.	FALSE	AluJr	SINE,Alu
chr1	11150682	C	T	3.65592E-05	EXOSC10	-	FALSE
chr1	154554940	G	C	0.00032	ADAR	-	FALSE
chr1	145500919	C	T	0.00029	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	28662105	A	G	9.98367E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr2	65496144	A	G	0.00883	ACTR2	+	FALSE
chr17	57281069	A	G	0.00278	PRR11	+	TRUE	AluSz	SINE,Alu
chr4	2940085	T	C	0.00801	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	179326296	A	G	0.00171	SOAT1	+	TRUE
chr5	179720333	A	G	0.00308		.	FALSE
chr19	11560438	A	G	7.61449E-05	PRKCSH	+	FALSE	AluSx	SINE,Alu
chr4	190881971	A	C	0.00183	FRG1	+	FALSE
chr1	6283306	T	C	0.00275	ICMT	-	TRUE	AluSx3	SINE,Alu
chr10	98281480	T	A	0.00620	TM9SF3	-	FALSE
chr1	9160866	C	A	0.00907		.	FALSE
chr1	932618	C	G	0.00569		.	FALSE
chr2	74090064	A	T	0.00197	STAMBP	+	FALSE
chr2	109383604	G	A	0.00331	RANBP2	+	FALSE
chr1	120164545	T	G	0.00058	ZNF697	-	FALSE
chr3	15113736	T	C	0.00081	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	145281613	C	A	0.00979	NBPF20,NOTCH2NL	+	FALSE
chr1	94983203	C	T	0.00686	ABCD3	+	FALSE
chr2	113289701	T	G	0.00994	TTL	+	FALSE
chr12	56510710	A	C	0.00050	RPL41	+	FALSE
chr9	132573290	C	T	0.00881	TOR1B	+	FALSE
chr8	117858602	A	G	0.00133	RAD21	-	FALSE
chr5	79923843	T	C	0.00229	DHFR	-	TRUE	AluSp	SINE,Alu
chr22	18571477	A	G	4.57932E-05	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	144931392	G	A	0.00286	NBPF20,PDE4DIP	+,-	FALSE
chr1	2160988	G	A	0.00137	SKI	+	FALSE
chr5	17276848	C	A	0.00634	BASP1	+	FALSE	(A)n	SINE,Alu
chr16	88789699	A	C	0.00936	PIEZO1	-	FALSE
chr1	202696878	C	T	0.00159	KDM5B	-	FALSE
chr1	10517486	T	C	0.00626		.	FALSE	AluSx1	SINE,Alu
chr1	26582091	G	A	0.00172	CEP85	+	FALSE
chr1	201846616	C	G	0.00209	IPO9	+	FALSE	(CA)n	SINE,Alu
chr3	15094061	G	A	0.00188	MRPS25	-	FALSE
chr7	6063467	G	A	0.00620	EIF2AK1	-	FALSE

RBP	HNRNPC
Knock-Method	siRNA
RBP Family	RRM_1
Biosample Name	MCF7
Tissue Type	Breast
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE100451
Platform	GPL16791
Pubmed ID	30158112

HNRNPC - Target Gene Network