RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr2	174090336	A	C	0.00331	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr9	124103030	G	A	0.00193	STOM	-	FALSE	AluSq2	SINE,Alu
chr5	175934037	C	A	0.00182	FAF2	+	FALSE	A-rich	SINE,Alu
chr3	181430508	G	A	3.55222E-06	SOX2-OT,SOX2	+	FALSE
chr22	39259534	A	G	0.00371	CBX6	-	FALSE
chr1	16112795	A	G	0.00499	FBLIM1	+	FALSE
chr8	27661036	C	A	0.00339	ESCO2	+	FALSE	A-rich	SINE,Alu
chr2	61277384	A	G	0.00339	PEX13	+	TRUE	AluSx	SINE,Alu
chr1	1650801	T	C	0.00761	CDK11B,CDK11A	-	FALSE
chr1	115259341	A	C	2.70927E-07	NRAS	-	FALSE
chr13	107196415	C	T	0.00285	ARGLU1	-	FALSE	(TTG)n	SINE,Alu
chr4	17629434	A	G	0.00661		.	FALSE	AluSx3	SINE,Alu
chr1	36067925	T	C	0.00397	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	128063523	G	C	0.00174	MAP3K2	-	FALSE
chr1	1573181	C	A	0.00038	CDK11B	-	FALSE
chr1	222802926	C	T	0.00035	MIA3	+	FALSE
chr1	145500933	C	T	0.00982	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	42008521	G	T	0.00882	HIVEP3	-	FALSE
chr1	214529320	T	G	0.00365	PTPN14	-	FALSE	AluJb	SINE,Alu
chr1	16958047	C	T	2.98219E-05		.	FALSE
chr17	43471481	G	A	0.00412		.	FALSE
chr2	99813003	A	G	0.00370	MRPL30	+	TRUE	AluJb	SINE,Alu
chr8	144332082	T	C	7.73207E-05	ZFP41	+	FALSE
chr5	69497703	G	A	0.00557	SMA4	-	FALSE
chr14	50792837	A	G	0.00550	ATP5S	+	TRUE	AluSx	SINE,Alu
chr1	36067811	T	C	0.00439	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	6283548	A	G	0.00286	ICMT	-	FALSE
chr1	28835847	A	G	0.00553	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	154128831	G	T	0.00183	TPM3	-	FALSE
chr3	12628920	G	C	3.08728E-06	RAF1	-	FALSE
chr3	73112378	A	G	0.00261	PPP4R2,EBLN2	+	FALSE
chr2	128063526	C	A	0.00759	MAP3K2	-	FALSE
chr1	11722350	C	A	0.00355	FBXO44	+	FALSE	OldhAT1	SINE,Alu
chr1	19585207	G	A	0.00672	MRTO4	+	FALSE
chr1	31905886	C	A	0.00226	SERINC2	+	FALSE
chr1	10517352	T	C	0.00311		.	FALSE	AluJr	SINE,Alu
chr5	179048585	T	C	0.00150	HNRNPH1	-	FALSE
chrX	24095065	G	T	0.00291	EIF2S3	+	FALSE
chr1	45976260	C	T	0.00043	MMACHC	+	FALSE
chrX	123045407	A	G	0.00153	XIAP	+	TRUE	AluJo	SINE,Alu
chr1	1419768	A	G	0.00250	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	26856462	T	G	0.00201	RPS6KA1	+	FALSE
chr10	13320236	C	T	0.00011	PHYH	-	FALSE
chr2	132481508	C	G	0.00093	C2orf27A	+	FALSE
chr1	53680090	G	A	0.00321	C1orf123	-	FALSE
chr1	120839681	C	A	0.00125	FAM72B	+	FALSE
chr2	232028396	A	G	0.00701	PSMD1	+	FALSE
chrX	123046306	A	G	0.00016	XIAP	+	TRUE	AluJb	SINE,Alu
chr3	10302056	A	G	0.00018	TATDN2	+	FALSE
chr1	150597527	T	C	0.00058	ENSA	-	FALSE
chr6	12120445	A	G	0.00037	HIVEP1	+	FALSE
chr1	569782	T	C	0.00010		.	FALSE
chr2	202038524	A	G	0.00382		.	FALSE	AluSx1	SINE,Alu
chr1	27992825	G	A	0.00012	IFI6	-	FALSE
chr4	17802819	T	C	0.00409	DCAF16	-	TRUE	AluSz	SINE,Alu
chr4	3769307	C	A	0.00173	ADRA2C	+	FALSE
chr17	49041692	T	C	2.35976E-05	SPAG9	-	TRUE	AluSx	SINE,Alu
chr6	158517308	A	G	0.00959	SYNJ2	+	FALSE
chr1	27202959	T	C	0.00094		.	FALSE	AluSq2	SINE,Alu
chr1	31905884	G	A	2.48126E-05	SERINC2	+	FALSE
chr1	36067870	T	C	0.00513	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	145512951	A	G	4.65248E-05	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	16928126	G	C	0.00958	NBPF1	-	FALSE	MLT1E3	SINE,Alu
chr1	206579936	A	G	0.00747	SRGAP2	+	FALSE
chr1	38280618	G	T	0.00020	MTF1	-	FALSE	(T)n	SINE,Alu
chr16	10623571	T	C	0.00329	EMP2	-	TRUE	AluSp	SINE,Alu
chr3	156258255	T	C	0.00059	SSR3	-	TRUE	AluYk3	SINE,Alu
chrX	2825114	T	C	0.00738	ARSD	-	TRUE	AluSx1	SINE,Alu
chr15	91044378	C	T	0.00453	IQGAP1	+	FALSE
chr1	16919961	C	T	0.00133	NBPF1	-	FALSE
chr2	37328013	T	C	0.00010		.	FALSE
chr1	65147002	C	T	6.62669E-07	CACHD1	+	FALSE
chr1	36316571	A	C	0.00893	AGO4	+	FALSE
chr1	40145850	G	C	0.00035	HPCAL4	-	FALSE
chr1	156713558	G	A	8.10199E-06	HDGF	-	FALSE
chr3	17202334	A	C	0.00770	TBC1D5	-	FALSE
chr1	204521616	A	G	0.00455	MDM4	+	TRUE	AluSg	SINE,Alu
chr5	37290435	T	C	8.22232E-07		.	FALSE	AluSz	SINE,Alu
chr3	100467676	A	T	0.00067	TFG	+	FALSE
chr3	48787684	T	C	0.00813	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr1	16890421	G	A	0.00024	NBPF1	-	FALSE
chr1	10093457	C	T	0.00777	UBE4B	+	FALSE
chr1	1653093	A	G	0.00768	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr20	25428587	A	G	0.00018	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	114226255	G	A	0.00381	MAGI3	+	FALSE
chr1	204524546	A	G	0.00054	MDM4	+	TRUE	AluY	SINE,Alu
chr1	116234313	A	G	0.00016	VANGL1	+	FALSE
chr6	44417835	A	G	8.27091E-07	CDC5L	+	TRUE	AluSx	SINE,Alu
chr1	101444069	C	A	0.00962	SLC30A7	+	FALSE	MIR3	SINE,Alu
chr5	132440285	C	G	0.00322	HSPA4	+	FALSE
chr1	93308168	T	A	0.00314	FAM69A	-	FALSE
chr1	3545189	T	G	0.00027	TPRG1L	+	FALSE
chr1	28800380	C	A	0.00186	PHACTR4	+	FALSE
chr12	98942820	A	G	0.00568	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	1252441	T	C	0.00086	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr1	46828734	T	C	0.00604	NSUN4	+	FALSE
chr2	121749583	T	C	0.00120	GLI2	+	FALSE
chr1	180854773	A	G	0.00800	XPR1	+	FALSE
chr1	100388748	T	C	0.00445	AGL	+	FALSE
chr10	101992425	T	C	0.00406	CWF19L1	-	TRUE	AluSq2	SINE,Alu
chr1	145513125	A	G	0.00274	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	1595540	T	C	0.00042	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr12	56215099	T	A	0.00227	DNAJC14	-	FALSE
chr9	131094270	A	G	0.00686	COQ4	+	TRUE	AluSx	SINE,Alu
chr5	134302899	A	G	0.00025		.	FALSE	AluSq2	SINE,Alu
chr11	31452788	A	G	0.00239	DNAJC24	+	TRUE	AluSx1	SINE,Alu
chr15	38645589	A	C	0.00445	SPRED1	+	FALSE
chr1	19981865	A	G	0.00213	MINOS1-NBL1,NBL1	+	FALSE
chr1	150704633	T	C	1.58455E-05	CTSS	-	TRUE	AluJo	SINE,Alu
chr3	10192672	G	A	5.82875E-07	VHL	+	FALSE	AluSx1	SINE,Alu
chr2	158170017	T	C	0.00662	GALNT5	+	FALSE
chr3	62189465	C	T	2.69664E-05	PTPRG	+	FALSE
chr1	19543783	T	C	0.00822	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr7	130629624	T	C	0.00568	LINC-PINT	-	TRUE
chr4	1380585	A	G	0.00644	UVSSA	+	TRUE	AluJr	SINE,Alu
chr2	220370192	C	T	0.00055	GMPPA	+	FALSE
chr1	89447720	G	A	0.00497	KYAT3,RBMXL1	-	FALSE
chr5	79923793	T	C	0.00664	DHFR	-	TRUE	AluSp	SINE,Alu
chr1	19238562	G	A	3.36880E-06	IFFO2	-	FALSE
chr1	145369007	T	G	0.00703	NBPF20,NBPF10	+	FALSE
chr1	145369709	A	G	0.00019	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr1	11979807	C	A	0.00574	KIAA2013	-	FALSE
chr10	16554732	T	A	0.00706	PTER	+	FALSE
chr2	37330517	T	C	0.00324		.	FALSE	AluSq2	SINE,Alu
chr5	40828076	C	A	0.00900	LOC100506548	-	FALSE
chr1	145512014	A	G	0.00144	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	212114662	A	G	0.00858	INTS7	-	FALSE
chr1	100615003	G	A	0.00046	TRMT13,LRRC39	+,-	FALSE
chr1	2125114	C	T	1.71441E-12	FAAP20	-	FALSE
chr8	144827207	A	T	0.00038	FAM83H-AS1	+	FALSE	ERVL-B4-int	SINE,Alu
chr1	87213188	C	A	0.00236	SH3GLB1	+	FALSE
chr15	90819619	A	G	5.14004E-06		.	FALSE	AluSx	SINE,Alu
chr1	155853061	A	G	0.00146	SYT11	+	TRUE	AluJb	SINE,Alu
chrX	77083939	T	C	5.71267E-05	MAGT1	-	TRUE	AluSz	SINE,Alu
chr14	23300642	C	A	0.00266	MRPL52	+	FALSE	MIRb	SINE,Alu
chr3	120114128	A	C	6.21214E-12	FSTL1	-	FALSE
chr1	45976723	T	C	5.68535E-05	MMACHC,PRDX1	+,-	FALSE
chr1	10520532	T	C	0.00150		.	FALSE	AluSx1	SINE,Alu
chr1	120612194	C	G	0.00561	NOTCH2	-	FALSE	(CCG)n	SINE,Alu
chr4	7060959	T	C	0.00832	GRPEL1	-	FALSE
chr1	21545088	T	C	0.00737	ECE1	-	FALSE	AluSx1	SINE,Alu
chr1	28661653	A	G	0.00053	MED18	+	TRUE	AluSg	SINE,Alu
chr3	45267450	C	G	0.00036	TMEM158	-	FALSE
chr1	109746728	A	G	0.00171	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr1	10520099	T	C	0.00152		.	FALSE	AluSx	SINE,Alu
chr8	30536410	T	C	3.13735E-05	GSR	-	TRUE	AluSp	SINE,Alu
chr1	10517314	T	C	0.00802		.	FALSE	AluJr	SINE,Alu
chr1	138156	G	T	0.00413	LOC729737	-	FALSE
chr1	10517527	T	C	0.00453		.	FALSE	AluSx1	SINE,Alu
chr1	85785107	T	C	4.02203E-05	DDAH1	-	FALSE
chr1	3546132	G	A	0.00113	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr1	17085028	G	A	0.00803	MST1L,LOC102724562	-	FALSE
chr4	38937372	T	C	0.00388	FAM114A1	+	FALSE
chr1	28826150	A	G	0.00048	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr3	15112495	T	C	0.00030	RBSN	-	TRUE	AluSq2	SINE,Alu
chr5	122682348	A	G	0.00377	CEP120	-	FALSE
chr2	178406769	A	T	0.00416	AGPS	+	FALSE
chr3	176742501	G	A	0.00707	TBL1XR1	-	FALSE	(A)n	SINE,Alu
chr18	691521	T	C	0.00150	ENOSF1	-	TRUE	AluJr	SINE,Alu
chr2	171849612	T	C	0.00364	TLK1	-	FALSE
chr1	113511408	A	G	0.00738		.	FALSE	AluY	SINE,Alu
chr1	207942535	A	G	0.00102	CD46	+	TRUE	AluSg4	SINE,Alu
chr1	26450101	A	G	0.00764	PDIK1L	+	FALSE
chr1	201846675	C	T	0.00145	IPO9	+	FALSE
chr12	51325280	A	G	0.00370	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr1	16929100	C	T	0.00911	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr6	150045755	T	C	0.00041	NUP43	-	TRUE	AluSq	SINE,Alu
chr12	27848053	A	T	0.00090	PPFIBP1	+	FALSE
chr1	147124310	T	G	0.00968	ACP6	-	FALSE
chr1	23833608	G	A	0.00890	E2F2	-	FALSE
chr9	137332311	T	G	0.00036	RXRA	+	FALSE
chr7	100804140	C	T	0.00377	AP1S1	+	FALSE
chr15	49283066	T	G	0.00065	SECISBP2L	-	FALSE
chr1	28906337	A	G	0.00810	SNHG12,SNORA61	-	FALSE
chr9	17835	A	G	0.00012	WASH1	-	FALSE
chr1	114443618	A	G	0.00910	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr1	38327700	T	C	0.00510	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr1	152187945	C	T	9.69718E-05	HRNR	-	FALSE	(GCCAGA)n	SINE,Alu
chr1	36068237	T	C	0.00150	PSMB2	-	TRUE	AluSc	SINE,Alu
chr17	45761110	G	T	0.00816		.	FALSE
chr1	33149496	A	G	0.00469	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr15	52202957	G	T	0.00094	TMOD3	+	FALSE	(T)n	SINE,Alu
chr1	42644770	C	T	1.21495E-06	FOXJ3	-	FALSE
chr7	44800040	C	A	0.00565	ZMIZ2	+	FALSE
chr17	65335477	T	C	2.02482E-05	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	247319489	G	A	0.00729	ZNF124	-	FALSE
chr10	60047611	G	A	0.00855	CISD1	+	FALSE	(A)n	SINE,Alu
chr2	207146631	C	A	9.52905E-05	ZDBF2	+	FALSE
chr1	33149486	A	G	5.00374E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr12	98942885	A	G	1.31269E-05	TMPO	+	TRUE	AluSc	SINE,Alu
chr5	178508569	C	T	0.00571	ZNF354C	+	FALSE
chr1	156692052	T	A	0.00369	ISG20L2	-	FALSE	AluY	SINE,Alu
chr1	224573601	C	T	0.00587	WDR26	-	FALSE
chr5	175816759	T	A	0.00018		.	FALSE
chr3	160219095	G	A	0.00620	KPNA4	-	FALSE	A-rich	SINE,Alu
chr1	10520588	T	C	0.00341		.	FALSE	AluSc8	SINE,Alu
chr1	109812555	A	C	3.87556E-05	CELSR2	+	FALSE
chr6	72012435	A	G	0.00723	OGFRL1	+	FALSE	AluSg	SINE,Alu
chr1	109818162	T	C	0.00253	CELSR2	+	FALSE
chr1	26143731	A	G	0.00337	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	109817245	C	T	2.70011E-05	CELSR2	+	FALSE
chr1	20977533	G	C	0.00234	PINK1,PINK1-AS	+,-	FALSE
chr2	217366534	A	G	0.00733		.	FALSE	AluSz	SINE,Alu
chr5	125961204	A	G	0.00196	PHAX	+	TRUE	AluSz	SINE,Alu
chr8	48890247	A	G	2.58682E-14	MCM4	+	TRUE	AluJb	SINE,Alu
chr1	36322433	G	A	0.00663	AGO4	+	FALSE
chr19	19792448	A	G	0.00416	ZNF101	+	TRUE	AluJb	SINE,Alu
chr1	31905906	T	A	0.00092	SERINC2	+	FALSE
chr2	242384528	G	T	2.14488E-07	FARP2	+	FALSE	AluJr	SINE,Alu
chr1	246829742	T	C	0.00960	CNST	+	FALSE	(TGTG)n	SINE,Alu
chr10	82192266	A	G	0.00391	FAM213A	+	TRUE	AluSx1	SINE,Alu
chr1	10519119	T	C	0.00892		.	FALSE	AluSx3	SINE,Alu
chr1	205719141	C	T	0.00021	NUCKS1	-	FALSE
chr6	150047376	T	C	0.00306	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	9294903	C	G	0.00353	H6PD	+	FALSE
chr3	49053219	A	G	1.70535E-05	WDR6,DALRD3	+,-	FALSE
chr6	150045852	T	C	0.00204	NUP43	-	TRUE	AluSq	SINE,Alu
chr5	130537761	A	G	0.00126	LYRM7	+	FALSE	AluJb	SINE,Alu
chr3	45722047	A	G	0.00319	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr15	63988357	C	G	0.00539	HERC1	-	FALSE
chr17	5288079	A	C	0.00085	RABEP1	+	FALSE
chr6	54805688	A	C	0.00220	FAM83B	+	FALSE
chr1	24999468	G	T	0.00075	SRRM1	+	FALSE	(T)n	SINE,Alu
chr11	71943768	G	T	1.87744E-06	INPPL1	+	FALSE
chr1	206580084	C	G	0.00104	SRGAP2	+	FALSE
chr2	61705068	A	T	0.00103		.	FALSE
chr1	228881129	A	G	0.00199	RHOU	+	FALSE
chr8	11701485	T	C	0.00027	CTSB	-	TRUE	AluSx1	SINE,Alu
chr4	165998642	T	C	0.00036	TMEM192	-	TRUE	AluSg	SINE,Alu
chr1	120162635	A	T	0.00203	ZNF697	-	FALSE
chr1	3371371	C	G	0.00844	ARHGEF16	+	FALSE
chr1	44423703	C	T	1.17684E-14	IPO13	+	FALSE
chr1	17394048	T	A	0.00055	PADI2	-	FALSE
chr1	148003749	T	C	0.00050	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	16893763	T	C	0.00996	NBPF1	-	FALSE
chr2	37331065	T	C	0.00293		.	FALSE	AluSx1	SINE,Alu
chr1	19198576	A	G	0.00542	ALDH4A1	-	FALSE
chr2	234386018	A	G	0.00299	USP40	-	FALSE
chr1	10520439	T	C	0.00293		.	FALSE	AluSx1	SINE,Alu
chrX	23721422	A	C	0.00160		.	FALSE
chr19	9673275	T	C	0.00081		.	FALSE	Tigger1	SINE,Alu
chr1	77759578	A	G	4.05543E-05	AK5	+	FALSE
chr1	145293428	G	C	0.00855	NBPF20,NBPF10	+	FALSE
chr17	5288077	G	C	0.00066	RABEP1	+	FALSE
chr1	28261658	T	G	0.00280	SMPDL3B	+	FALSE
chr1	32631809	C	T	2.91083E-08	KPNA6	+	FALSE
chr1	44685732	T	C	8.08877E-10	DMAP1	+	FALSE
chr1	6311399	A	G	0.00126	GPR153	-	FALSE
chr5	149823795	A	T	0.00722	RPS14	-	FALSE
chr4	39550978	T	C	3.11849E-06	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	120163248	G	A	0.00204	ZNF697	-	FALSE
chr1	28662182	A	G	0.00402	MED18	+	TRUE	AluSq2	SINE,Alu
chr2	173461888	A	G	0.00110	PDK1	+	TRUE	AluJr	SINE,Alu
chr12	123253741	A	G	0.00134	DENR	+	TRUE	(AT)n	SINE,Alu
chr22	18571474	A	G	1.16198E-07	PEX26	+	TRUE	AluSz	SINE,Alu
chr10	22824829	T	C	0.00207	PIP4K2A	-	FALSE
chr1	70696606	C	A	0.00362	SRSF11	+	FALSE
chr11	32125961	C	T	0.00118	RCN1	+	FALSE
chr1	45975345	A	G	0.00357	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	160231910	A	T	0.00051	DCAF8	-	FALSE
chr1	114940211	G	T	0.00925	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	47142538	G	A	7.23026E-06	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr1	115259543	C	T	0.00492	CSDE1	-	FALSE
chr3	15114492	T	C	0.00073	RBSN	-	TRUE	AluY	SINE,Alu
chr1	3730400	T	C	0.00894	CEP104	-	TRUE	AluSx3	SINE,Alu
chr3	57743246	G	A	0.00221	SLMAP	+	FALSE
chr2	232319613	C	T	0.00022	NCL	-	FALSE
chr6	97592900	C	A	0.00076	MMS22L	-	FALSE
chr1	87573327	T	C	0.00571	HS2ST1	+	FALSE	(AT)n	SINE,Alu
chr3	49397323	T	C	0.00000	RHOA	-	TRUE
chr2	32532809	A	G	0.00255		.	FALSE	AluSx1	SINE,Alu
chr2	24225006	A	G	0.00277		.	FALSE	AluSx	SINE,Alu
chr5	32404176	C	T	0.00342	ZFR	-	FALSE
chr2	204301760	C	T	0.00313	RAPH1	-	FALSE
chr5	176863519	G	C	0.00567	GRK6	+	FALSE
chr14	53242417	T	C	0.00423	GNPNAT1	-	TRUE	AluJo	SINE,Alu
chr1	145283986	C	T	0.00814	NBPF20,NOTCH2NL	+	FALSE
chr1	117910682	G	A	0.00013	MAN1A2	+	FALSE
chr2	96573123	C	T	0.00413	ANKRD36C	-	FALSE
chr3	45721836	A	G	0.00714	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr5	74324902	C	T	0.00574	GCNT4	-	FALSE
chr1	36789546	A	G	0.00562	EVA1B	-	FALSE	MIRb	SINE,Alu
chr1	9161245	T	C	0.00071		.	FALSE	AluSx	SINE,Alu
chr9	17829	G	A	0.00142	WASH1	-	FALSE
chr11	35017260	T	C	0.00224	PDHX	+	FALSE
chr15	90819418	A	G	0.00516		.	FALSE	AluSx	SINE,Alu
chr1	94995491	C	T	0.00036	F3	-	FALSE	AluSx	SINE,Alu
chr3	160968914	T	C	0.00305	NMD3	+	FALSE
chr1	53291344	A	G	0.00088	ZYG11B	+	FALSE	(A)n	SINE,Alu
chr2	217366821	A	G	0.00510		.	FALSE	AluSz6	SINE,Alu
chr17	5288084	T	A	0.00232	RABEP1	+	FALSE
chr1	121133770	A	G	0.00295	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr2	91805928	T	C	0.00000		.	FALSE	MLT1H1	SINE,Alu
chr1	9642827	G	A	0.00985	SLC25A33	+	FALSE
chr1	145209366	A	G	0.00499	NBPF20,NOTCH2NL	+	FALSE
chr17	80347528	T	C	0.00048	OGFOD3	-	TRUE	AluJb	SINE,Alu
chr1	145442111	C	A	0.00090	NBPF20,NBPF10,TXNIP	+	FALSE
chr1	214524509	A	G	0.00471	PTPN14	-	FALSE	AluSg	SINE,Alu
chr1	19542458	T	C	6.76498E-05	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	172547465	A	G	0.00725	SUCO	+	FALSE
chr1	52498140	G	A	0.00044	TXNDC12,KTI12	-	FALSE
chr1	51738627	A	G	0.00024	RNF11	+	FALSE
chr1	89648082	G	A	0.00074	GBP4	-	FALSE	LTR2B	SINE,Alu
chr1	51434560	G	A	0.00685	CDKN2C	+	FALSE
chr1	6283296	T	C	0.00106	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	3697137	G	T	0.00250	LRRC47	-	FALSE
chr1	1593060	T	C	5.25946E-05	CDK11B,SLC35E2B	-	FALSE
chr9	125609941	G	A	0.00043		.	FALSE
chr1	1419768	A	G	0.00189	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr2	55459820	C	T	0.00714	RPS27A	+	FALSE
chr1	6282315	T	C	0.00508	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	144594170	C	T	0.00636	NBPF20	+	FALSE
chr1	144595886	G	A	0.00205	NBPF20	+	FALSE	AluJb	SINE,Alu
chr2	208619742	A	G	1.70106E-07	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr3	88205579	G	T	2.47620E-05	C3orf38	+	FALSE
chr2	7182946	T	C	0.00748	RNF144A	+	FALSE
chr2	37330368	T	C	0.00069		.	FALSE	AluSq2	SINE,Alu
chr1	36067760	T	C	0.00213	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	117618067	C	T	0.00118	TTF2	+	FALSE
chr11	93466866	G	T	0.00559	MIR1304	-	FALSE	AluJr	SINE,Alu
chr1	230979247	G	A	0.00137	C1orf198	-	FALSE
chr1	28836973	A	G	0.00289	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr5	139931627	C	T	0.00073	SRA1	-	FALSE
chr6	143382538	A	T	0.00145	AIG1	+	FALSE
chr2	20450819	T	C	0.00807	PUM2	-	TRUE
chr3	197611291	A	G	0.00095		.	FALSE	AluSx1	SINE,Alu
chr3	14986110	T	C	0.00632	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	59124634	C	A	0.00322	MYSM1	-	FALSE	(AC)n	SINE,Alu
chr19	9673107	T	C	1.71894E-07		.	FALSE	AluSx3	SINE,Alu
chr1	145116147	T	A	0.00031	NBPF20,SEC22B	+	FALSE
chr6	109001948	G	A	0.00030	FOXO3	+	FALSE	(A)n	SINE,Alu
chr4	110971055	A	T	0.00048	ELOVL6	-	FALSE
chr1	9642832	C	A	0.00082		.	FALSE
chr1	19441410	G	A	7.84348E-05	UBR4	-	FALSE
chr1	899810	G	A	3.12519E-10	KLHL17	+	FALSE
chr17	43002237	C	A	0.00141	KIF18B	-	FALSE
chr2	160625969	T	C	0.00527	LY75-CD302,CD302	-	TRUE	AluSz	SINE,Alu
chr1	900721	T	C	0.00109	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr3	120113286	C	T	1.47726E-06	FSTL1	-	FALSE
chr1	33148282	A	G	0.00825	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr2	99812465	A	G	2.16984E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	11982580	G	A	2.06927E-05	KIAA2013	-	FALSE
chr1	225683180	G	T	0.00076	ENAH	-	FALSE
chr3	185826764	C	T	0.00364	ETV5	-	FALSE
chr7	44842099	A	G	1.82502E-05	PPIA	+	TRUE
chr1	220232138	T	C	0.00011	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	67875106	C	A	0.00403	SERBP1	-	FALSE	(AC)n	SINE,Alu
chr8	25317824	A	T	0.00017	CDCA2	+	FALSE
chr19	3540006	T	C	3.25622E-05	C19orf71	+	FALSE	AluJo	SINE,Alu
chr3	13670776	T	C	0.00336	FBLN2	+	FALSE
chr1	51822219	G	A	0.00325	EPS15	-	FALSE
chr2	37331855	C	T	0.00965		.	FALSE	L1MC4	SINE,Alu
chr1	153907287	G	C	0.00122	DENND4B	-	FALSE	(CTG)n	SINE,Alu
chr2	227597697	G	T	0.00890	IRS1	-	FALSE
chr1	160965379	T	C	0.00010	F11R	-	TRUE	AluSc	SINE,Alu
chr1	46075779	A	G	0.00640	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	1683565	G	A	0.00552	NADK	-	FALSE
chr6	26096636	A	G	0.00531		.	FALSE	AluSg	SINE,Alu
chr1	26901090	C	T	0.00056	RPS6KA1	+	FALSE
chr2	206987561	T	C	0.00235		.	FALSE	AluJb	SINE,Alu
chr8	146200325	T	C	0.00599	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr1	899810	G	A	2.29962E-09	KLHL17	+	FALSE
chr1	161488402	T	A	0.00083	FCGR2A	+	FALSE
chrX	9686187	T	C	0.00420	TBL1X	+	FALSE
chr15	63616883	A	T	0.00036	CA12	-	FALSE
chr19	53914806	A	G	0.00221	ZNF765	+	TRUE	AluSp	SINE,Alu
chr2	206982296	T	C	0.00720		.	FALSE	AluSg7	SINE,Alu
chr19	46053369	T	C	0.00504	OPA3	-	TRUE	AluSx1	SINE,Alu
chr3	10290515	G	A	0.00904	TATDN2	+	FALSE
chr1	16909220	T	C	0.00449	NBPF1	-	FALSE
chr9	133778117	C	T	0.00739	FIBCD1	-	FALSE
chr5	40715440	A	C	0.00646	TTC33	-	FALSE
chr1	37958451	C	G	0.00882	MEAF6	-	FALSE	MER5B	SINE,Alu
chr1	27879798	A	G	0.00899	AHDC1	-	FALSE	MIRb	SINE,Alu
chr1	154987526	C	T	0.00218	ZBTB7B	+	FALSE
chr2	191799592	A	G	2.07606E-11	GLS	+	TRUE
chr7	29962664	A	C	0.00077	SCRN1	-	FALSE
chr1	27205214	T	C	0.00799		.	FALSE	AluSc	SINE,Alu
chr10	13320126	T	A	0.00830	PHYH	-	FALSE
chr11	32625925	A	G	0.00845	CCDC73	-	FALSE	AluJb	SINE,Alu
chr1	45244414	T	A	0.00750		.	FALSE
chr6	17557412	C	T	0.00986	CAP2	+	FALSE
chr1	9160900	T	C	0.00628		.	FALSE	AluJb	SINE,Alu
chr14	105270483	G	T	7.92193E-06	ZBTB42	+	FALSE
chr16	10623553	T	C	0.00024	EMP2	-	TRUE	AluSp	SINE,Alu
chr3	33185036	G	A	0.00573	CRTAP	+	FALSE	L2a	SINE,Alu
chr3	169810385	C	T	0.00621	PHC3	-	FALSE
chr1	184675814	G	A	0.00048	EDEM3	-	FALSE
chr17	16344882	T	G	0.00060	LRRC75A-AS1	+	FALSE	AluJb	SINE,Alu
chr2	47130850	A	G	0.00875	MCFD2	-	FALSE
chr3	178741082	A	C	0.00145	ZMAT3	-	FALSE
chr1	16933753	G	A	0.00609	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	154128835	G	T	0.00032	TPM3	-	FALSE
chr1	53290057	A	G	0.00142	ZYG11B	+	TRUE	AluSg4	SINE,Alu
chr1	148556753	G	A	0.00472		.	FALSE
chr1	173869111	C	G	0.00221		.	FALSE
chr1	15909744	C	T	0.00100	AGMAT	-	FALSE
chr1	146650289	C	T	0.00024	PDIA3P1	+	FALSE
chr1	24296708	A	G	0.00512		.	FALSE
chr1	44088568	G	A	0.00274	PTPRF	+	FALSE	A-rich	SINE,Alu
chr1	95362514	G	T	7.06346E-05	CNN3	-	FALSE
chr17	61502463	T	G	0.00370	TANC2	+	FALSE
chr8	41401497	A	G	0.00051	LOC102723729,GINS4	+,-	FALSE	AluSq2	SINE,Alu
chr5	150647736	G	T	0.00964	GM2A	+	FALSE	AluSc	SINE,Alu
chr1	85786957	T	G	0.00959	DDAH1	-	FALSE
chr4	25236017	T	C	2.76644E-09	PI4K2B	+	FALSE
chr1	33086876	T	C	0.00075	ZBTB8OS	-	TRUE	AluY	SINE,Alu
chr7	152342445	T	C	0.00059		.	FALSE	AluJo	SINE,Alu

RBP	HNRNPF
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	HMLE
Tissue Type	Breast
Biosample Type	Cell line
# of Control	2
# of Treat	1
Species	Human
Data Source	GEO
Profile ID	GSE107542
Platform	GPL20301
Pubmed ID	29269483

HNRNPF - Target Gene Network