| RBP | DDX6 |
| Knock-Method | shRNA |
| RBP Family | DEAD |
| Biosample Name | hESCs |
| Tissue Type | Embryo |
| Biosample Type | Cell line |
| # of Control | 2 |
| # of Treat | 2 |
| Species | Human |
| Data Source | GEO |
| Profile ID | GSE112383 |
| Platform | GPL11154 |
| Pubmed ID | 31588046 |
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| Chrom | Site | Ref_allele | Alt_allele | Pvalue | Genename | Strand | KnownRNAediting | RepeatName | RepeatFamily |
|---|---|---|---|---|---|---|---|---|---|
| chr7 | 98015394 | G | C | 0.00118 | BAIAP2L1 | - | FALSE | ||
| chr7 | 123390143 | G | A | 0.00910 | . | FALSE | |||
| chr20 | 18468351 | T | C | 0.00169 | RBBP9 | - | TRUE | AluSz6 | SINE,Alu |
| chr3 | 178741082 | A | C | 0.00145 | ZMAT3 | - | FALSE | ||
| chr15 | 39880822 | A | G | 0.00281 | THBS1 | + | FALSE | ||
| chr2 | 37331221 | T | C | 1.68149E-05 | . | FALSE | AluSx1 | SINE,Alu | |
| chr19 | 23542193 | T | C | 0.00099 | ZNF91 | - | TRUE | AluY | SINE,Alu |
| chr2 | 201676441 | G | A | 0.00140 | LOC101927795,BZW1 | +,- | FALSE | ||
| chr1 | 16892274 | A | T | 0.00371 | NBPF1 | - | FALSE | ||
| chr2 | 216908679 | C | T | 0.00988 | PECR | - | FALSE | ||
| chr1 | 25655853 | A | G | 0.00147 | RSRP1,RHD | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 1650832 | A | G | 0.00065 | CDK11B,CDK11A | - | FALSE | ||
| chr1 | 24710405 | A | G | 0.00246 | STPG1 | - | FALSE | ||
| chr1 | 113672569 | A | G | 0.00674 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 27879800 | T | G | 0.00473 | AHDC1 | - | FALSE | MIRb | SINE,Alu |
| chr1 | 226171400 | T | C | 0.00359 | SDE2 | - | TRUE | BC200 | SINE,Alu |
| chr1 | 10520487 | T | C | 0.00559 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 204525548 | A | G | 0.00501 | MDM4 | + | TRUE | AluSz | SINE,Alu |
| chr10 | 77157784 | C | T | 0.00027 | ZNF503 | - | FALSE | (T)n | SINE,Alu |
| chr2 | 201774279 | T | C | 9.55391E-05 | . | FALSE | AluSz | SINE,Alu | |
| chr9 | 33039686 | G | A | 0.00542 | DNAJA1 | + | FALSE | ||
| chr1 | 2333763 | G | A | 0.00867 | RER1 | + | FALSE | ||
| chr3 | 196659892 | T | G | 0.00620 | SENP5 | + | FALSE | AluSz | SINE,Alu |
| chr3 | 121382204 | C | T | 0.00309 | GOLGB1 | - | FALSE | ||
| chr1 | 16933628 | A | G | 0.00430 | NBPF1 | - | FALSE | GA-rich | SINE,Alu |
| chr7 | 4809089 | A | G | 0.00552 | FOXK1 | + | TRUE | AluSx1 | SINE,Alu |
| chr1 | 156495521 | C | A | 0.00097 | IQGAP3 | - | FALSE | ||
| chr3 | 112720120 | T | G | 0.00573 | GTPBP8 | + | FALSE | ||
| chr2 | 24225554 | A | G | 0.00419 | . | FALSE | AluSq2 | SINE,Alu | |
| chr1 | 19543457 | T | C | 0.00569 | LOC101927895,EMC1 | +,- | FALSE | AluJb | SINE,Alu |
| chr2 | 37328013 | T | C | 0.00364 | . | FALSE | |||
| chr1 | 154128333 | T | A | 0.00204 | TPM3 | - | FALSE | ||
| chr10 | 75008876 | T | C | 0.00255 | DNAJC9-AS1,MRPS16 | +,- | FALSE | AluJr | SINE,Alu |
| chr6 | 116600810 | G | A | 0.00028 | DSE,TSPYL1 | +,- | FALSE | ||
| chr1 | 6314822 | T | C | 0.00300 | GPR153 | - | FALSE | ||
| chr4 | 39551140 | T | C | 1.44695E-08 | UGDH-AS1,SMIM14 | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 118066459 | A | G | 1.18146E-05 | MAN1A2 | + | FALSE | ||
| chr1 | 16952920 | G | A | 0.00475 | CROCCP2 | - | FALSE | ||
| chr1 | 19542310 | T | C | 0.00873 | LOC101927895,EMC1 | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 45976928 | G | A | 0.00715 | PRDX1 | - | FALSE | ||
| chr1 | 207219603 | T | C | 0.00341 | YOD1 | - | FALSE | ||
| chr3 | 66419942 | A | G | 0.00284 | SLC25A26 | + | FALSE | ||
| chr6 | 79595097 | A | G | 0.00712 | IRAK1BP1 | + | FALSE | ||
| chr14 | 74526976 | T | C | 0.00469 | BBOF1,ALDH6A1 | +,- | FALSE | AluJo | SINE,Alu |
| chr16 | 48388382 | A | G | 0.00301 | MIR5095 | + | TRUE | AluSz | SINE,Alu |
| chr1 | 201350983 | C | T | 0.00768 | LAD1 | - | FALSE | ||
| chr1 | 86049302 | A | G | 0.00114 | CYR61 | + | FALSE | ||
| chr1 | 1634860 | G | T | 0.00659 | CDK11B,CDK11A | - | FALSE | ||
| chr1 | 15990929 | C | A | 0.00202 | . | FALSE | AluSx3 | SINE,Alu | |
| chr4 | 7761211 | C | T | 8.70555E-11 | AFAP1,AFAP1-AS1 | +,- | FALSE | ||
| chr1 | 19984104 | A | C | 0.00638 | MINOS1-NBL1,NBL1 | + | FALSE | ||
| chr1 | 19953129 | T | A | 0.00934 | MINOS1,MINOS1-NBL1 | + | FALSE | ||
| chr1 | 900717 | C | T | 0.00661 | KLHL17 | + | FALSE | (TTTA)n | SINE,Alu |
| chr1 | 59120961 | G | A | 9.55369E-05 | MYSM1 | - | FALSE | ||
| chr6 | 97592894 | A | C | 0.00654 | MMS22L | - | FALSE | ||
| chr1 | 101372409 | T | C | 0.00203 | SLC30A7 | + | FALSE | ||
| chr1 | 16928622 | C | A | 0.00011 | NBPF1 | - | FALSE | ||
| chr3 | 37094679 | G | A | 7.98870E-06 | LRRFIP2 | - | FALSE | ||
| chr5 | 121362874 | A | G | 0.00022 | SRFBP1 | + | TRUE | FRAM | SINE,Alu |
| chr2 | 20192696 | G | A | 0.00400 | MATN3,LOC101928222 | +,- | FALSE | ||
| chr1 | 145291108 | A | C | 0.00827 | NBPF20 | + | FALSE | ||
| chr1 | 222713503 | C | G | 0.00860 | HHIPL2 | - | FALSE | ||
| chr1 | 55207988 | G | A | 0.00914 | MROH7-TTC4,TTC4 | + | FALSE | ||
| chr4 | 17488286 | T | G | 0.00027 | QDPR | - | FALSE | ||
| chr1 | 9160866 | C | A | 0.00907 | . | FALSE | |||
| chr1 | 9163328 | T | C | 0.00287 | . | FALSE | AluSp | SINE,Alu | |
| chr1 | 145283733 | A | G | 0.00458 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr1 | 145513051 | A | G | 0.00269 | NBPF20,NBPF10,RBM8A,GNRHR2 | +,- | FALSE | AluSz6 | SINE,Alu |
| chr1 | 180247477 | C | T | 0.00060 | . | FALSE | |||
| chr21 | 18940466 | A | T | 0.00169 | CXADR | + | FALSE | AluY | SINE,Alu |
| chr6 | 42855057 | A | G | 0.00034 | RPL7L1 | + | TRUE | AluSp | SINE,Alu |
| chr1 | 6282400 | T | C | 0.00132 | ICMT | - | TRUE | AluSz | SINE,Alu |
| chr1 | 100658578 | G | A | 5.62742E-07 | DBT | - | FALSE | ||
| chr2 | 56150885 | G | A | 0.00624 | EFEMP1 | - | FALSE | ||
| chr19 | 24103987 | A | G | 1.84513E-07 | ZNF726 | + | TRUE | AluSg4 | SINE,Alu |
| chr1 | 169101274 | T | G | 0.00026 | ATP1B1 | + | FALSE | (T)n | SINE,Alu |
| chr11 | 32625925 | A | G | 0.00845 | CCDC73 | - | FALSE | AluJb | SINE,Alu |
| chr1 | 10438014 | A | C | 0.00046 | KIF1B | + | FALSE | ||
| chrX | 77083673 | T | C | 0.00090 | MAGT1 | - | TRUE | AluSz6 | SINE,Alu |
| chr1 | 145513098 | A | G | 0.00514 | NBPF20,NBPF10,RBM8A,GNRHR2 | +,- | FALSE | AluSz6 | SINE,Alu |
| chr2 | 204300093 | A | C | 0.00105 | RAPH1 | - | FALSE | FLAM_C | SINE,Alu |
| chr2 | 101622881 | C | A | 1.48865E-05 | RPL31 | + | FALSE | ||
| chr4 | 57801150 | A | T | 0.00462 | REST | + | FALSE | ||
| chr2 | 232319610 | A | T | 0.00029 | NCL | - | FALSE | ||
| chr1 | 1458255 | T | G | 0.00438 | ATAD3A | + | FALSE | ||
| chr3 | 183861243 | A | G | 0.00049 | EIF2B5 | + | FALSE | ||
| chr1 | 28825465 | A | G | 0.00756 | PHACTR4 | + | TRUE | AluSg | SINE,Alu |
| chr1 | 19586520 | A | G | 0.00305 | MRTO4 | + | TRUE | AluSz | SINE,Alu |
| chr4 | 76568676 | T | A | 0.00051 | G3BP2 | - | FALSE | ||
| chr1 | 53288924 | A | G | 0.00099 | ZYG11B | + | TRUE | AluJo | SINE,Alu |
| chr17 | 45761110 | G | T | 0.00816 | . | FALSE | |||
| chr2 | 220416967 | C | T | 0.00300 | OBSL1 | - | FALSE | ||
| chr2 | 118583874 | C | G | 0.00569 | DDX18 | + | FALSE | ||
| chr6 | 42854682 | A | G | 5.90307E-05 | RPL7L1 | + | TRUE | AluSc | SINE,Alu |
| chr1 | 24798499 | T | C | 0.00028 | NIPAL3 | + | FALSE | (T)n | SINE,Alu |
| chr1 | 144615138 | T | G | 0.00196 | NBPF20,NBPF9 | + | FALSE | ||
| chr3 | 126156660 | C | G | 0.00182 | ZXDC | - | FALSE | ||
| chr2 | 219100706 | A | G | 0.00874 | ARPC2 | + | TRUE | AluSx1 | SINE,Alu |
| chr1 | 19810693 | G | C | 0.00042 | CAPZB | - | FALSE | ||
| chr20 | 25428617 | A | G | 0.00622 | GINS1 | + | FALSE | AluJb | SINE,Alu |
| chr2 | 198368110 | C | A | 0.00053 | HSPE1,HSPE1-MOB4 | + | FALSE | ||
| chr1 | 67874689 | T | C | 7.42611E-10 | SERBP1 | - | TRUE | AluSx3 | SINE,Alu |
| chr8 | 144662353 | G | A | 0.00951 | EEF1D | - | FALSE | ||
| chr1 | 45244411 | C | A | 0.00362 | RPS8 | + | FALSE | ||
| chr1 | 120166681 | G | A | 0.00879 | ZNF697 | - | FALSE | ||
| chr1 | 24289896 | T | G | 0.00051 | PNRC2 | + | FALSE | ||
| chr12 | 56815652 | C | T | 1.92663E-05 | TIMELESS | - | FALSE | ||
| chr1 | 67874854 | T | C | 0.00358 | SERBP1 | - | TRUE | AluSx | SINE,Alu |
| chr1 | 16576291 | A | G | 0.00842 | FBXO42 | - | FALSE | A-rich | SINE,Alu |
| chr1 | 28661657 | A | G | 0.00910 | MED18 | + | TRUE | AluSg | SINE,Alu |
| chr1 | 109816293 | G | C | 0.00759 | CELSR2 | + | FALSE | ||
| chr1 | 109855152 | A | C | 0.00227 | SORT1 | - | FALSE | A-rich | SINE,Alu |
| chr3 | 120115286 | T | G | 0.00077 | FSTL1 | - | FALSE | ||
| chr2 | 233446568 | G | A | 0.00900 | EIF4E2 | + | FALSE | ||
| chr1 | 226172221 | T | C | 0.00030 | SDE2 | - | FALSE | L1MEf | SINE,Alu |
| chr20 | 25427885 | A | G | 0.00455 | GINS1 | + | TRUE | AluSz | SINE,Alu |
| chr2 | 37331531 | T | C | 0.00389 | . | FALSE | AluJb | SINE,Alu | |
| chr19 | 59095449 | A | G | 6.25071E-06 | CENPBD1P1 | + | TRUE | AluJb | SINE,Alu |
| chr17 | 5288077 | G | C | 0.00066 | RABEP1 | + | FALSE | ||
| chr5 | 65120054 | C | T | 0.00625 | NLN | + | FALSE | ||
| chr2 | 37230734 | C | T | 0.00025 | HEATR5B | - | FALSE | ||
| chr1 | 16892913 | A | G | 0.00441 | NBPF1 | - | FALSE | ||
| chr2 | 37331841 | C | T | 0.00179 | . | FALSE | L1MC4 | SINE,Alu | |
| chr1 | 16918783 | C | T | 0.00252 | NBPF1 | - | FALSE | ||
| chr1 | 156567496 | C | T | 0.00012 | GPATCH4 | - | FALSE | MIR3 | SINE,Alu |
| chr7 | 65992665 | T | C | 2.17687E-05 | . | FALSE | AluJr | SINE,Alu | |
| chr1 | 210025751 | G | A | 0.00067 | DIEXF | + | FALSE | Tigger4a | SINE,Alu |
| chr1 | 10519912 | T | C | 0.00942 | . | FALSE | AluJr | SINE,Alu | |
| chrX | 152916229 | G | A | 0.00809 | DUSP9 | + | FALSE | ||
| chr1 | 19585553 | A | G | 0.00039 | MRTO4 | + | TRUE | AluSc8 | SINE,Alu |
| chr1 | 931935 | T | C | 0.00796 | . | FALSE | |||
| chr1 | 158067059 | A | C | 0.00655 | KIRREL | + | FALSE | ||
| chr4 | 56295166 | A | G | 0.00988 | CLOCK | - | FALSE | ||
| chr1 | 36522460 | A | G | 0.00407 | . | FALSE | AluSc | SINE,Alu | |
| chr2 | 39050141 | A | C | 0.00924 | DHX57 | - | FALSE | ||
| chr2 | 176789423 | C | A | 0.00441 | LNPK | - | FALSE | MSTB1 | SINE,Alu |
| chr16 | 71681515 | A | G | 0.00308 | PHLPP2 | - | FALSE | ||
| chr5 | 122359499 | C | A | 0.00277 | PPIC | - | FALSE | (AC)n | SINE,Alu |
| chr3 | 49763338 | T | C | 2.41941E-06 | IP6K1 | - | FALSE | ||
| chr2 | 100019496 | A | G | 0.00789 | REV1 | - | FALSE | ||
| chr18 | 10691357 | G | A | 0.00082 | PIEZO2 | - | FALSE | ||
| chr1 | 16929148 | G | A | 0.00037 | NBPF1 | - | FALSE | LTR16B2 | SINE,Alu |
| chr4 | 7060959 | T | C | 0.00832 | GRPEL1 | - | FALSE | ||
| chr1 | 28825331 | A | G | 0.00563 | PHACTR4 | + | TRUE | AluSg | SINE,Alu |
| chr4 | 89181456 | T | C | 0.00024 | PPM1K | - | TRUE | AluSx1 | SINE,Alu |
| chr17 | 42225547 | A | C | 0.00240 | C17orf53 | + | FALSE | ||
| chr2 | 206987229 | T | C | 0.00743 | . | FALSE | AluSx | SINE,Alu | |
| chr6 | 3021448 | T | C | 0.00126 | HTATSF1P2 | - | TRUE | AluJr4 | SINE,Alu |
| chr3 | 42599091 | G | A | 0.00196 | SEC22C | - | FALSE | ||
| chr7 | 127947979 | T | C | 0.00257 | . | FALSE | AluJr | SINE,Alu | |
| chrX | 3526613 | C | T | 0.00930 | PRKX | - | FALSE | ||
| chr2 | 86249840 | T | C | 0.00482 | LOC90784 | - | TRUE | AluJr | SINE,Alu |
| chr19 | 46052975 | T | C | 0.00652 | OPA3 | - | TRUE | AluSz6 | SINE,Alu |
| chr1 | 16133978 | T | C | 0.00515 | UQCRHL | - | FALSE | ||
| chr2 | 105881486 | A | G | 0.00042 | TGFBRAP1 | - | FALSE | ||
| chr1 | 16096934 | C | T | 0.00336 | FBLIM1 | + | FALSE | ||
| chr1 | 145694181 | A | G | 0.00052 | NBPF20,NBPF10 | + | TRUE | AluSz | SINE,Alu |
| chr2 | 101010038 | G | A | 0.00339 | CHST10 | - | FALSE | ||
| chr17 | 42877749 | T | C | 0.00287 | GJC1 | - | TRUE | AluSg | SINE,Alu |
| chr13 | 46530764 | T | G | 0.00385 | . | FALSE | |||
| chr1 | 10520296 | T | C | 0.00765 | . | FALSE | AluSx | SINE,Alu | |
| chr10 | 16554732 | T | A | 0.00706 | PTER | + | FALSE | ||
| chr4 | 6302519 | G | A | 0.00195 | WFS1 | + | FALSE | ||
| chr3 | 194361676 | C | T | 0.00378 | LSG1 | - | FALSE | MSTA | SINE,Alu |
| chr1 | 28825830 | A | G | 0.00549 | PHACTR4 | + | TRUE | AluSp | SINE,Alu |
| chr2 | 128952699 | A | G | 0.00497 | UGGT1 | + | TRUE | AluSp | SINE,Alu |
| chr1 | 236702210 | A | G | 0.00153 | LGALS8 | + | FALSE | ||
| chr1 | 91990450 | A | T | 0.00091 | CDC7 | + | FALSE | LFSINE_Vert | SINE,Alu |
| chr3 | 149237753 | G | A | 2.17555E-05 | WWTR1 | - | FALSE | AluSq2 | SINE,Alu |
| chr1 | 9644558 | A | G | 0.00451 | . | FALSE | AluSx | SINE,Alu | |
| chr1 | 40147817 | C | A | 0.00982 | HPCAL4 | - | FALSE | ||
| chr2 | 69689663 | T | C | 0.00091 | AAK1 | - | TRUE | AluSg | SINE,Alu |
| chr1 | 168218671 | A | G | 0.00974 | . | FALSE | AluSz | SINE,Alu | |
| chr6 | 33377511 | T | C | 5.31992E-06 | . | FALSE | (TG)n | SINE,Alu | |
| chr1 | 1595540 | T | C | 0.00042 | CDK11B,SLC35E2B | - | TRUE | AluJr | SINE,Alu |
| chr1 | 9328120 | A | G | 0.00024 | H6PD | + | TRUE | AluJr | SINE,Alu |
| chr1 | 54871709 | T | C | 0.00110 | SSBP3 | - | FALSE | ||
| chr7 | 115898442 | G | C | 2.36867E-05 | TES | + | FALSE | AluSx | SINE,Alu |
| chr15 | 90819444 | A | G | 5.90002E-05 | . | FALSE | AluSx | SINE,Alu | |
| chr3 | 185646406 | A | T | 0.00023 | TRA2B | - | FALSE | ||
| chr1 | 31405694 | G | A | 0.00986 | PUM1 | - | FALSE | ||
| chr1 | 75671215 | C | T | 0.00019 | SLC44A5 | - | FALSE | ||
| chr9 | 86553587 | G | A | 0.00556 | C9orf64 | - | FALSE | ||
| chr8 | 12283440 | A | G | 0.00041 | FAM86B2 | - | FALSE | ||
| chr16 | 15023271 | G | A | 0.00403 | . | FALSE | |||
| chr1 | 569981 | C | A | 4.36771E-05 | . | FALSE | |||
| chr12 | 49745500 | A | G | 0.00265 | DNAJC22 | + | TRUE | AluSx3 | SINE,Alu |
| chr1 | 9160900 | T | C | 0.00893 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 149913733 | T | C | 0.00143 | OTUD7B | - | TRUE | MER96B | SINE,Alu |
| chr3 | 181430144 | C | T | 0.00043 | SOX2-OT,SOX2 | + | FALSE | ||
| chr2 | 207942527 | A | T | 0.00107 | KLF7 | - | FALSE | ||
| chr1 | 203277243 | G | T | 1.60795E-05 | BTG2 | + | FALSE | ||
| chr7 | 17384440 | A | G | 0.00271 | AHR | + | TRUE | AluSx | SINE,Alu |
| chr2 | 20401859 | A | T | 0.00930 | SDC1 | - | FALSE | (A)n | SINE,Alu |
| chr1 | 154438880 | T | C | 0.00170 | IL6R | + | FALSE | ||
| chr3 | 48787042 | T | C | 1.97898E-05 | PRKAR2A | - | TRUE | AluSx3 | SINE,Alu |
| chr20 | 54963816 | T | C | 0.00750 | AURKA | - | TRUE | AluSq10 | SINE,Alu |
| chr1 | 87328396 | A | T | 0.00148 | SEP15 | - | FALSE | ||
| chrX | 123045381 | A | G | 0.00893 | XIAP | + | TRUE | AluJo | SINE,Alu |
| chr1 | 9326888 | T | C | 0.00887 | H6PD | + | FALSE | AluSx1 | SINE,Alu |
| chr3 | 184766301 | T | C | 0.00648 | VPS8 | + | FALSE | ||
| chr3 | 122293773 | A | T | 0.00852 | DTX3L | + | FALSE | ||
| chr1 | 114940216 | T | G | 0.00207 | TRIM33 | - | FALSE | (T)n | SINE,Alu |
| chr15 | 33064742 | C | G | 0.00215 | FMN1 | - | FALSE | ||
| chr2 | 61764920 | C | A | 0.00363 | XPO1 | - | FALSE | ||
| chr4 | 71682381 | T | C | 0.00037 | GRSF1 | - | TRUE | AluSz6 | SINE,Alu |
| chr1 | 10517313 | T | C | 0.00015 | . | FALSE | AluJr | SINE,Alu | |
| chr3 | 196557357 | G | T | 0.00615 | PAK2 | + | FALSE | ||
| chr1 | 204526648 | A | G | 0.00302 | MDM4 | + | TRUE | AluSx | SINE,Alu |
| chr3 | 44839350 | A | C | 0.00837 | KIF15 | + | FALSE | ||
| chr1 | 27205224 | T | C | 0.00353 | . | FALSE | AluSc | SINE,Alu | |
| chr1 | 19542410 | T | C | 0.00270 | LOC101927895,EMC1 | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 144833386 | A | G | 0.00325 | NBPF20 | + | FALSE | L1MEc | SINE,Alu |
| chr1 | 155838369 | G | C | 0.00346 | SYT11 | + | FALSE | ||
| chr1 | 100550370 | T | A | 0.00731 | SASS6 | - | FALSE | ||
| chr14 | 53243545 | T | C | 3.01634E-08 | GNPNAT1 | - | TRUE | AluSx3 | SINE,Alu |
| chr2 | 71214819 | A | T | 0.00346 | TEX261 | - | FALSE | ||
| chr1 | 227211026 | C | G | 0.00373 | CDC42BPA | - | FALSE | ||
| chr1 | 28920925 | A | G | 0.00294 | RAB42 | + | TRUE | AluSx | SINE,Alu |
| chr1 | 33148196 | A | G | 0.00303 | SYNC,RBBP4 | +,- | FALSE | AluSg | SINE,Alu |
| chr1 | 109475629 | A | G | 0.00744 | GPSM2,CLCC1 | +,- | FALSE | AluJo | SINE,Alu |
| chr1 | 6683582 | C | A | 0.00152 | PHF13 | + | FALSE | ||
| chr2 | 206987108 | T | C | 0.00015 | . | FALSE | AluSx | SINE,Alu | |
| chr3 | 15113694 | T | C | 0.00622 | RBSN | - | TRUE | AluSz6 | SINE,Alu |
| chr1 | 16958064 | A | G | 2.44983E-05 | . | FALSE | |||
| chr1 | 162494683 | G | T | 0.00269 | UHMK1 | + | FALSE | AluSg4 | SINE,Alu |
| chr3 | 10192596 | A | G | 7.92003E-05 | VHL | + | TRUE | AluSx1 | SINE,Alu |
| chr1 | 182353198 | A | T | 0.00473 | GLUL | - | FALSE | ||
| chr1 | 10517998 | T | C | 0.00821 | . | FALSE | AluJr | SINE,Alu | |
| chr1 | 10517314 | T | C | 0.00288 | . | FALSE | AluJr | SINE,Alu | |
| chr14 | 90509582 | T | C | 0.00017 | TDP1 | + | FALSE | ||
| chr1 | 51822219 | G | A | 0.00325 | EPS15 | - | FALSE | ||
| chr1 | 32158374 | T | C | 0.00134 | COL16A1 | - | FALSE | ||
| chr3 | 44790781 | T | C | 0.00074 | KIAA1143 | - | TRUE | AluY | SINE,Alu |
| chr1 | 65299558 | C | T | 0.00161 | JAK1 | - | FALSE | ||
| chr12 | 9464358 | A | G | 0.00056 | LOC642846 | + | FALSE | ||
| chr5 | 174956487 | T | C | 0.00457 | SFXN1 | + | FALSE | ||
| chr16 | 8902411 | A | G | 0.00357 | PMM2 | + | FALSE | ||
| chr11 | 93474585 | T | G | 0.00531 | TAF1D | - | FALSE | ||
| chr6 | 2833055 | G | A | 0.00015 | SERPINB1 | - | FALSE | AluSx | SINE,Alu |
| chr1 | 68940566 | A | C | 0.00126 | DEPDC1 | - | FALSE | ||
| chr1 | 144868170 | C | T | 0.00415 | NBPF20,PDE4DIP | +,- | FALSE | ||
| chr1 | 172410967 | G | A | 1.85684E-05 | C1orf105,PIGC | +,- | FALSE | ||
| chr1 | 46075661 | A | G | 0.00071 | NASP | + | TRUE | AluSx4 | SINE,Alu |
| chr2 | 11781593 | G | T | 0.00551 | GREB1 | + | FALSE | ||
| chr1 | 36386884 | C | T | 0.00375 | AGO1 | + | FALSE | ||
| chr1 | 45975740 | C | G | 0.00096 | MMACHC | + | FALSE | AluSx4 | SINE,Alu |
| chr1 | 180169330 | C | T | 0.00374 | FLJ23867 | + | FALSE | MIR | SINE,Alu |
| chr1 | 52306075 | T | C | 8.71211E-05 | NRDC | - | FALSE | (TCA)n | SINE,Alu |
| chr15 | 33064791 | G | A | 0.00203 | FMN1 | - | FALSE | ||
| chr12 | 53435627 | A | G | 0.00010 | EIF4B | + | FALSE | ||
| chr6 | 160211656 | G | T | 0.00339 | MRPL18 | + | FALSE | ||
| chr11 | 48189152 | A | C | 0.00050 | PTPRJ | + | FALSE | ||
| chr3 | 49395695 | A | C | 0.00159 | GPX1 | - | FALSE | ||
| chr1 | 15896984 | A | G | 0.00297 | DNAJC16 | + | FALSE | FLAM_C | SINE,Alu |
| chr3 | 141879810 | T | C | 0.00784 | GK5 | - | FALSE | AluJr | SINE,Alu |
| chr1 | 120164252 | G | A | 0.00139 | ZNF697 | - | FALSE | ||
| chr3 | 14528004 | T | C | 0.00091 | SLC6A6 | + | FALSE | ||
| chr5 | 72801323 | C | A | 0.00240 | BTF3 | + | FALSE | ||
| chr2 | 17897488 | T | C | 0.00430 | SMC6 | - | FALSE | ||
| chr1 | 2336210 | C | T | 0.00206 | RER1 | + | FALSE | ||
| chr1 | 36068325 | T | C | 0.00638 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr21 | 37789767 | A | G | 0.00236 | . | FALSE | AluSx | SINE,Alu | |
| chr12 | 27953267 | T | G | 0.00233 | KLHL42 | + | FALSE | ||
| chr5 | 175816759 | T | A | 0.00018 | . | FALSE | |||
| chr10 | 79800443 | A | G | 0.00971 | RPS24 | + | FALSE | ||
| chr5 | 112350098 | C | T | 7.36383E-05 | DCP2 | + | FALSE | ||
| chr2 | 61277384 | A | G | 0.00339 | PEX13 | + | TRUE | AluSx | SINE,Alu |
| chr1 | 16933135 | G | T | 0.00363 | NBPF1 | - | FALSE | L1MC2 | SINE,Alu |
| chr2 | 128644574 | A | G | 0.00163 | . | FALSE | |||
| chr1 | 114443606 | A | G | 0.00014 | AP4B1-AS1,AP4B1 | +,- | FALSE | AluSp | SINE,Alu |
| chr8 | 12879062 | T | C | 0.00035 | KIAA1456 | + | FALSE | ||
| chr19 | 11945631 | A | G | 0.00091 | ZNF440 | + | TRUE | AluSp | SINE,Alu |
| chr1 | 10517653 | T | C | 0.00475 | . | FALSE | AluSx1 | SINE,Alu | |
| chr19 | 37073373 | T | C | 0.00492 | ZNF529,ZNF529-AS1 | +,- | FALSE | AluY | SINE,Alu |
| chr1 | 46076642 | A | G | 0.00552 | NASP | + | TRUE | AluSx | SINE,Alu |
| chr1 | 160967848 | T | C | 0.00200 | F11R | - | TRUE | AluSp | SINE,Alu |
| chr4 | 57327058 | A | G | 0.00315 | PAICS | + | TRUE | AluSx1 | SINE,Alu |
| chr2 | 37479862 | C | T | 0.00603 | PRKD3 | - | FALSE | ||
| chr6 | 126661502 | G | T | 0.00873 | CENPW | + | FALSE | ||
| chr1 | 35650014 | C | A | 0.00012 | SFPQ | - | FALSE | ||
| chr5 | 130729522 | T | G | 0.00506 | CDC42SE2 | + | FALSE | (T)n | SINE,Alu |
| chr1 | 145281408 | C | T | 0.00220 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr1 | 65330637 | C | T | 0.00047 | JAK1 | - | FALSE | ||
| chr20 | 18469048 | T | C | 0.00213 | RBBP9 | - | TRUE | AluJr | SINE,Alu |
| chr1 | 90049040 | A | G | 0.00190 | LRRC8B | + | FALSE | ||
| chr1 | 17393261 | T | C | 3.60266E-05 | PADI2 | - | FALSE | ||
| chr9 | 131457814 | G | A | 0.00021 | SET | + | FALSE | ||
| chr1 | 17522430 | A | G | 0.00684 | . | FALSE | |||
| chr7 | 100957851 | T | C | 0.00028 | LOC101927746,IFT22 | +,- | FALSE | MADE1 | SINE,Alu |
| chr2 | 197004439 | A | G | 0.00034 | STK17B | - | FALSE | ||
| chr1 | 1647893 | C | T | 0.00509 | CDK11B,CDK11A | - | FALSE | ||
| chr4 | 36121336 | T | G | 0.00183 | ARAP2 | - | FALSE | ||
| chr17 | 80899281 | G | A | 0.00053 | TBCD | + | FALSE | ||
| chr2 | 206983115 | T | C | 0.00992 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 145209366 | A | G | 0.00499 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr1 | 92975244 | T | A | 0.00220 | EVI5 | - | FALSE | ||
| chr15 | 41593352 | A | G | 0.00083 | . | FALSE | AluSz6 | SINE,Alu | |
| chr1 | 569803 | G | A | 0.00166 | . | FALSE | |||
| chr2 | 37331201 | T | C | 0.00291 | . | FALSE | AluSx1 | SINE,Alu | |
| chr9 | 21331119 | C | T | 0.00343 | KLHL9 | - | FALSE | L1M | SINE,Alu |
| chr2 | 63817855 | C | G | 0.00096 | MDH1 | + | FALSE | ||
| chr2 | 233199107 | C | T | 0.00675 | DIS3L2 | + | FALSE | ||
| chr2 | 8823941 | G | A | 0.00053 | ID2 | + | FALSE | ||
| chr8 | 56985609 | G | T | 0.00134 | RPS20 | - | FALSE | ||
| chr14 | 74526945 | T | C | 2.53258E-07 | BBOF1,ALDH6A1 | +,- | FALSE | AluJo | SINE,Alu |