RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	40147856	T	C	0.00205	HPCAL4	-	TRUE
chr1	161932324	A	G	0.00056	ATF6	+	FALSE
chr1	226333556	C	A	0.00977	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr3	56654248	T	G	3.99921E-06	CCDC66,FAM208A	+,-	FALSE
chr1	16891340	T	A	0.00022	NBPF1	-	FALSE
chr1	144931101	G	A	0.00358	NBPF20,PDE4DIP	+,-	FALSE
chr12	90914	C	T	0.00539	LOC100288778	+	FALSE
chr7	128294489	G	T	0.00354	LINC01000	+	FALSE
chrM	10307	A	C	0.00588		.	FALSE
chr1	145689537	A	G	0.00593	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	67874731	T	C	0.00125	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr5	154194459	C	A	0.00832	LARP1	+	FALSE
chr3	10005159	A	T	0.00939	EMC3	-	FALSE	(AT)n	SINE,Alu
chr1	36068369	T	C	0.00511	PSMB2	-	TRUE	AluSc	SINE,Alu
chr7	94060363	T	G	2.98576E-06	COL1A2	+	FALSE
chr6	90344605	T	C	0.00013	LYRM2	-	TRUE	AluSz6	SINE,Alu
chr4	177252238	A	G	9.63526E-05	SPCS3	+	TRUE
chr16	81420621	G	C	0.00214		.	FALSE	L3b	SINE,Alu
chr1	204524546	A	G	0.00054	MDM4	+	TRUE	AluY	SINE,Alu
chr1	1337841	C	A	0.00186	MRPL20	-	FALSE
chr1	32742441	G	A	2.50972E-10	LCK	+	FALSE
chr5	56177845	A	T	0.00420	MAP3K1	+	FALSE
chr17	57281021	A	G	9.11421E-05	PRR11	+	TRUE	AluSz	SINE,Alu
chr3	196660344	T	A	0.00022	SENP5	+	FALSE
chr1	31426815	A	G	0.00797	PUM1	-	FALSE
chr1	36068370	T	C	4.62049E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr9	131872862	C	G	0.00131	CRAT	-	FALSE
chr1	16932536	C	T	0.00114	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	19234134	A	G	0.00027	IFFO2	-	FALSE
chr1	9644558	A	G	0.00451		.	FALSE	AluSx	SINE,Alu
chr15	41590978	A	G	1.05775E-06	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr8	11700444	C	G	0.00042	CTSB	-	FALSE	AluSq2	SINE,Alu
chr22	18572730	A	G	6.64824E-05	PEX26	+	TRUE	AluYf1	SINE,Alu
chr2	37327590	T	C	0.00681		.	FALSE
chr3	172115590	A	G	0.00355	FNDC3B	+	FALSE
chr1	245017462	G	A	0.00255	HNRNPU,SNORA100	-	FALSE
chr8	145159707	G	C	0.00158	MAF1	+	FALSE
chr1	16889633	T	C	0.00217	NBPF1	-	TRUE
chr1	26608014	C	A	0.00328		.	FALSE
chr1	16939857	C	T	0.00091	NBPF1	-	FALSE
chr7	6501830	G	A	0.00110	KDELR2	-	FALSE
chr1	115249239	G	A	1.76451E-06	NRAS	-	FALSE
chr1	26608014	C	A	1.07737E-06		.	FALSE
chr1	16935130	C	T	0.00288	NBPF1	-	FALSE
chr19	16661541	T	C	0.00120	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr17	26955330	A	C	0.00291	KIAA0100	-	FALSE
chr1	40147817	C	A	0.00982	HPCAL4	-	FALSE
chr1	35319605	A	C	0.00226	SMIM12	-	FALSE	AluSg	SINE,Alu
chr2	85132777	T	C	1.13350E-06	TMSB10	+	FALSE
chr4	2940430	T	C	2.47251E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	47844500	T	G	0.00596	CMPK1	+	FALSE
chr1	70718272	A	T	0.00166		.	FALSE
chr2	74332840	G	C	4.77205E-06	TET3	+	FALSE
chr7	6501831	T	A	0.00110	KDELR2	-	FALSE
chr2	10923581	C	T	0.00593	ATP6V1C2,PDIA6	+,-	FALSE
chr19	811933	C	T	0.00026	PTBP1	+	FALSE
chr2	191067766	T	C	0.00034	C2orf88	+	FALSE
chr1	109475706	T	C	0.00375	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	45976259	A	C	0.00015	MMACHC	+	FALSE
chr17	41144250	G	T	0.00025	RUNDC1	+	FALSE
chr2	37331560	T	C	6.28398E-05		.	FALSE	AluJb	SINE,Alu
chr3	196771049	T	C	0.00010	DLG1	-	FALSE
chr2	37331119	T	C	0.00758		.	FALSE	AluSx1	SINE,Alu
chr9	136209397	G	C	0.00709	MED22	-	FALSE
chr1	9330479	C	T	0.00027	H6PD	+	FALSE
chr1	19585771	A	G	0.00029	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr1	109855150	A	C	0.00062	SORT1	-	FALSE	A-rich	SINE,Alu
chr1	44447006	T	C	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr2	196999051	C	G	0.00403	STK17B	-	FALSE	MER1B	SINE,Alu
chr8	144940222	A	C	0.00202	EPPK1	-	FALSE
chr1	24935369	A	G	0.00454	NCMAP	+	TRUE	AluJb	SINE,Alu
chr15	90820171	A	G	0.00185		.	FALSE
chr1	36067677	T	C	1.65353E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	6582558	T	C	0.00479	NOL9	-	TRUE	AluSx1	SINE,Alu
chr2	37429737	A	G	3.16512E-05	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr1	33148706	A	G	0.00038	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr3	14986150	T	C	7.09959E-07	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr7	32529936	G	C	0.00027	LSM5	-	FALSE
chr1	28825419	A	G	0.00204	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	788795	T	G	0.00333	LINC01128	+	FALSE	Charlie19a	SINE,Alu
chr14	31916927	T	C	1.57126E-05	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr2	34080819	A	C	0.00815	LINC01317	+	FALSE	MSTD	SINE,Alu
chr2	37230734	C	T	0.00025	HEATR5B	-	FALSE
chr1	45975345	A	G	0.00227	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr19	58361328	G	C	0.00972	ZNF587	+	FALSE
chr2	10179657	A	C	7.77751E-05		.	FALSE	L1ME4b	SINE,Alu
chr2	37327670	T	C	0.00021		.	FALSE
chr6	29704336	G	A	0.00207		.	FALSE	L1ME3A	SINE,Alu
chr1	145512151	C	A	0.00723	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	53291408	A	G	0.00021	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr5	110463616	G	T	0.00264	WDR36	+	FALSE	(T)n	SINE,Alu
chr3	49762662	G	T	6.99764E-06	IP6K1	-	FALSE
chr1	46075663	A	G	0.00240	NASP	+	TRUE	AluSx4	SINE,Alu
chr5	81571875	A	T	0.00072	RPS23	-	FALSE
chr6	42856064	A	G	0.00019	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr4	177252326	A	G	2.59441E-08	SPCS3	+	TRUE
chr1	10517958	G	A	0.00149		.	FALSE
chr4	88059664	T	G	0.00178	AFF1	+	FALSE	(GT)n	SINE,Alu
chr3	195678003	C	G	0.00146		.	FALSE	L4_A_Mam	SINE,Alu
chr17	65335394	T	C	5.10125E-06	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	9162206	T	C	0.00882		.	FALSE	AluSx	SINE,Alu
chr1	144595943	A	G	0.00050	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	21780000	G	T	0.00153	NBPF3	+	FALSE	ERVL-E-int	SINE,Alu
chr17	65335253	T	C	0.00344	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	28662253	A	G	0.00117	MED18	+	TRUE	AluSq2	SINE,Alu
chr12	96259951	G	A	0.00328	SNRPF	+	FALSE
chr16	10623666	T	C	1.68352E-07	EMP2	-	TRUE	AluSp	SINE,Alu
chr2	50147865	T	A	0.00112	NRXN1	-	FALSE	(GT)n	SINE,Alu
chr1	326500	A	G	0.00189		.	FALSE
chr1	16892918	T	C	0.00158	NBPF1	-	FALSE
chr1	70728523	A	G	0.00051	ANKRD13C	-	FALSE
chr2	206986233	T	C	0.00491		.	FALSE	AluSz	SINE,Alu
chr10	47221452	T	C	0.00869		.	FALSE	AluJb	SINE,Alu
chr11	31452750	A	G	0.00326	DNAJC24	+	TRUE	AluSx1	SINE,Alu
chr5	177658896	A	C	0.00642	PHYKPL	-	FALSE
chr1	51822219	G	A	0.00018	EPS15	-	FALSE
chr9	131093971	A	G	0.00033	COQ4	+	TRUE	AluJo	SINE,Alu
chr1	50883798	T	C	0.00156	DMRTA2	-	FALSE
chr2	204301757	C	T	0.00999	RAPH1	-	FALSE
chr1	1549354	G	A	0.00132		.	FALSE	HAL1	SINE,Alu
chr5	110463621	G	T	0.00786	WDR36	+	FALSE	(T)n	SINE,Alu
chr7	44839297	A	T	0.00777	PPIA	+	FALSE
chr1	28859267	A	C	2.52971E-07	RCC1	+	FALSE
chr10	60047612	A	G	0.00015	CISD1	+	FALSE	(A)n	SINE,Alu
chr1	87200773	T	C	0.00098	SH3GLB1	+	FALSE
chr7	94297301	G	T	0.00145	PEG10	+	FALSE
chr9	116812614	A	G	0.00674	ZNF618	+	FALSE
chr17	7760704	A	G	0.00297	NAA38	-	FALSE
chr4	177252327	A	G	2.51883E-09	SPCS3	+	TRUE
chr2	187544223	T	G	0.00254	ITGAV	+	FALSE
chr1	110564996	C	T	0.00926	AHCYL1	+	FALSE
chr1	1595586	T	C	0.00108	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr7	6501820	A	T	0.00288	KDELR2	-	FALSE
chr4	128756656	A	G	0.00022		.	FALSE	AluSx	SINE,Alu
chr3	183890097	G	A	1.43668E-06	DVL3	+	FALSE
chr5	170837892	C	A	0.00725		.	FALSE
chr1	75230606	C	T	0.00077	TYW3	+	FALSE
chr1	31905886	C	A	0.00226	SERINC2	+	FALSE
chr11	8707397	T	A	0.00046	RPL27A	+	FALSE
chr1	43391826	G	T	0.00202	SLC2A1	-	FALSE
chr1	26226610	C	T	0.00955	STMN1	-	FALSE
chr1	145368837	C	A	4.93702E-07	NBPF20,NBPF10	+	FALSE
chr1	35648840	G	T	0.00543	SFPQ	-	FALSE	AluSx3	SINE,Alu
chr1	114938247	G	A	0.00197	TRIM33	-	FALSE
chr5	79923843	T	C	0.00363	DHFR	-	TRUE	AluSp	SINE,Alu
chr5	141690772	C	T	0.00632	SPRY4	-	FALSE
chr5	179665201	C	T	0.00037	MAPK9	-	FALSE	AluSx4	SINE,Alu
chr4	57327058	A	G	0.00315	PAICS	+	TRUE	AluSx1	SINE,Alu
chr5	154194457	A	C	0.00466	LARP1	+	FALSE
chr8	1730491	A	G	5.38446E-06	CLN8	+	TRUE	AluSx1	SINE,Alu
chr1	2125114	C	T	1.71441E-12	FAAP20	-	FALSE
chr5	118174668	T	C	1.32199E-05	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	160967899	T	C	0.00011	F11R	-	TRUE	AluSp	SINE,Alu
chr5	139931630	A	T	0.00052	SRA1	-	FALSE
chr1	36068295	T	C	0.00076	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	130538304	A	G	0.00050	LYRM7	+	TRUE	FAM	SINE,Alu
chr6	13788200	T	C	0.00879	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	36068166	T	C	0.00686	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	20826788	A	T	6.12716E-05	MUL1	-	FALSE
chr6	3022544	T	C	0.00440	HTATSF1P2	-	TRUE	AluJr	SINE,Alu
chr1	10520702	T	C	0.00883	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	182993025	C	T	0.00490	LAMC1	+	FALSE
chr2	215674224	G	A	9.97816E-05	BARD1	-	FALSE
chr1	988503	A	T	8.91206E-06	AGRN	+	FALSE
chr2	46524711	C	T	0.00513	EPAS1	+	FALSE
chr1	59124634	C	A	0.00322	MYSM1	-	FALSE	(AC)n	SINE,Alu
chr2	109401285	G	A	0.00087	RANBP2	+	FALSE
chr6	13790848	T	C	0.00344	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr5	69497703	G	A	0.00557	SMA4	-	FALSE
chr2	128601583	T	C	0.00550		.	FALSE	AluJr	SINE,Alu
chr1	45976723	T	C	5.68535E-05	MMACHC,PRDX1	+,-	FALSE
chr5	203683	G	T	0.00399		.	FALSE	MIRb	SINE,Alu
chr12	88454641	A	T	0.00753	CEP290	-	FALSE
chr1	173793106	C	T	0.00772	CENPL	-	FALSE
chr8	25222165	A	G	0.00019	DOCK5	+	FALSE
chr1	116238478	C	T	0.00834	VANGL1	+	FALSE
chr1	145513098	A	G	0.00514	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr19	16663345	T	C	0.00304	SLC35E1	-	TRUE	AluSg	SINE,Alu
chr1	9160975	T	C	0.00347		.	FALSE	AluJb	SINE,Alu
chr1	1337733	A	C	0.00017	MRPL20	-	FALSE
chr1	28825466	A	G	0.00701	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr11	62407518	T	C	3.11115E-06	GANAB	-	TRUE	AluY	SINE,Alu
chr1	19984098	C	G	0.00826	MINOS1-NBL1,NBL1	+	FALSE
chr5	73932315	T	C	0.00420	ENC1	-	FALSE
chr1	186281696	T	G	0.00564	PRG4,TPR	+,-	FALSE
chr12	120899702	T	A	0.00967	GATC,SRSF9	+,-	FALSE
chr1	145368461	A	C	0.00542	NBPF20,NBPF10	+	FALSE
chr4	66439707	T	C	0.00148	EPHA5	-	FALSE
chr1	1594977	T	C	0.00314	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	15755248	C	T	0.00405	EFHD2	+	FALSE
chr2	176791182	T	C	0.00603	LNPK	-	TRUE	MSTD	SINE,Alu
chr15	64455123	G	T	1.10189E-06	PPIB	-	FALSE
chr2	37331025	T	C	0.00055		.	FALSE	AluSx1	SINE,Alu
chr1	16932594	T	C	0.00064	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr3	40577810	A	G	0.00896	ZNF621	+	TRUE	AluSz	SINE,Alu
chr10	96090672	A	G	0.00018		.	FALSE
chr1	117945049	G	A	0.00120	MAN1A2	+	FALSE
chr14	21929044	T	C	3.48024E-06	RAB2B	-	TRUE	AluSp	SINE,Alu
chr1	32158374	T	C	0.00134	COL16A1	-	FALSE
chr1	109479978	G	T	0.00057	CLCC1	-	FALSE
chr1	10520383	T	C	0.00401		.	FALSE	AluSx1	SINE,Alu
chr1	91486838	G	C	0.00370	ZNF644	-	FALSE
chr3	185826764	C	T	0.00364	ETV5	-	FALSE
chr1	92147985	C	A	0.00370	TGFBR3	-	FALSE
chr4	103809241	A	T	0.00073	CISD2,SLC9B1	+,-	FALSE
chr2	37328013	T	C	1.05952E-05		.	FALSE
chr1	150704413	T	C	0.00236	CTSS	-	TRUE	AluJo	SINE,Alu
chr3	37094679	G	A	7.98870E-06	LRRFIP2	-	FALSE
chr1	179042692	A	G	0.00707	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	162497663	G	A	0.00335	UHMK1	+	FALSE
chr3	98299365	T	G	3.92075E-11	CPOX	-	FALSE
chr2	85837797	T	C	0.00050	USP39,C2orf68	+,-	FALSE	AluSx	SINE,Alu
chr1	24022437	A	G	0.00342	RPL11	+	FALSE
chr1	9163290	T	C	0.00016		.	FALSE	AluSp	SINE,Alu
chr1	207247477	T	C	2.68116E-05	PFKFB2	+	FALSE	MER5B	SINE,Alu
chr2	206986380	T	C	0.00053		.	FALSE	AluSz	SINE,Alu
chr1	35644503	T	A	0.00551	SFPQ	-	FALSE
chr17	28506279	G	A	0.00634	NSRP1	+	FALSE
chr1	2323041	T	C	0.00970	MORN1	-	FALSE
chr1	156233189	C	T	5.51743E-05	SMG5	-	FALSE
chr1	50906945	C	T	0.00178	FAF1	-	FALSE
chr3	126755134	C	T	0.00920	PLXNA1	+	FALSE
chr3	50150360	A	G	0.00827	RBM5	+	TRUE	AluSx	SINE,Alu
chr2	55462102	A	G	0.00026	RPS27A	+	FALSE
chr2	207146629	A	G	0.00434	ZDBF2	+	FALSE
chr1	26774224	A	G	0.00349	DHDDS	+	TRUE	AluSz6	SINE,Alu
chr1	33150642	A	G	0.00316	SYNC,RBBP4	+,-	FALSE	AluJo	SINE,Alu
chr4	57326156	A	G	0.00230	PAICS	+	TRUE	AluJr	SINE,Alu
chr3	14986200	G	T	0.00346	FGD5-AS1	-	FALSE	AluSq2	SINE,Alu
chr20	18468404	T	C	0.00301	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr4	177252238	A	G	0.00061	SPCS3	+	TRUE
chr3	176739159	A	C	0.00304	TBL1XR1	-	FALSE
chr1	117648345	A	G	0.00739		.	FALSE
chr1	6659505	G	A	0.00017	KLHL21	-	FALSE
chr1	148556784	G	A	0.00100		.	FALSE
chr17	73940167	T	C	0.00035	ACOX1	-	TRUE	AluJb	SINE,Alu
chr3	142772593	G	A	0.00135	U2SURP	+	FALSE
chr1	43391824	A	T	0.00552	SLC2A1	-	FALSE
chr1	62628443	A	G	0.00359	PATJ	+	TRUE	AluSg4	SINE,Alu
chr8	11700737	T	C	0.00126	CTSB	-	TRUE	AluSg	SINE,Alu
chr2	217366919	A	G	0.00480		.	FALSE	AluSz6	SINE,Alu
chr1	6683578	T	C	0.00151	PHF13	+	FALSE
chr1	39549983	G	A	0.00896	MACF1	+	FALSE
chr12	64842920	A	G	2.84792E-05		.	FALSE	AluSz	SINE,Alu
chr1	142804471	C	G	0.00555		.	FALSE	MIRb	SINE,Alu
chr1	97543764	C	T	0.00901	DPYD	-	FALSE
chr3	73115126	A	T	0.00228	PPP4R2	+	FALSE
chr4	26433556	A	C	3.10862E-15	RBPJ	+	FALSE
chr22	18572742	A	G	8.48972E-05	PEX26	+	TRUE	AluYf1	SINE,Alu
chr9	137330709	G	T	6.64722E-05	RXRA	+	FALSE	(GCTG)n	SINE,Alu
chr4	189020293	G	A	0.00361	TRIML2	-	FALSE
chr1	16894514	C	T	0.00348	NBPF1	-	FALSE
chr1	10502831	A	G	0.00193	APITD1,APITD1-CORT	+	FALSE
chr1	16913677	T	C	0.00638	NBPF1	-	FALSE
chr1	10519787	A	T	0.00037		.	FALSE	(A)n	SINE,Alu
chr6	29857578	A	G	0.00280		.	FALSE
chr1	16909220	T	C	0.00449	NBPF1	-	FALSE
chr2	136541072	T	C	0.00496	UBXN4	+	FALSE
chr1	27426756	A	G	0.00384	SLC9A1	-	FALSE
chr4	144475125	T	G	0.00133	SMARCA5	+	FALSE
chr18	10691357	G	A	0.00082	PIEZO2	-	FALSE
chr5	34906547	T	C	0.00051	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	21810587	A	G	0.00563	NBPF3	+	FALSE
chr15	31619607	G	A	0.00887	KLF13	+	FALSE
chr1	36024788	C	T	2.88658E-15	NCDN	+	FALSE
chr3	195393406	C	T	0.00690	SDHAP2	+	FALSE
chr1	3545198	T	C	0.00013	TPRG1L	+	FALSE
chr7	72480095	A	G	0.00590	PMS2P2	+	FALSE
chr1	200375847	T	G	0.00027	ZNF281	-	FALSE	(T)n	SINE,Alu
chr19	53914418	A	G	0.00891	ZNF765	+	TRUE	AluSx	SINE,Alu
chr12	53435276	T	G	4.45732E-05	EIF4B	+	FALSE
chr3	9935263	A	G	1.04104E-09	JAGN1	+	FALSE
chr1	93297609	C	T	8.96972E-06	RPL5	+	FALSE
chr8	38829416	A	G	0.00695	PLEKHA2	+	TRUE	AluYc	SINE,Alu
chr1	46828657	C	T	0.00378	NSUN4	+	FALSE
chr4	119553307	T	C	0.00096	LOC729218	+	FALSE
chr1	205686522	G	T	0.00427	NUCKS1	-	FALSE
chr3	20025679	A	G	0.00292	RAB5A,PP2D1	+,-	FALSE
chr17	909317	G	A	0.00766	ABR	-	FALSE
chr1	161930908	G	A	0.00664	ATF6	+	FALSE
chr1	67874697	T	C	0.00186	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	20976759	C	T	2.31016E-05	PINK1,PINK1-AS	+,-	FALSE
chr1	179829505	T	C	0.00592	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	142688599	A	G	0.00860		.	FALSE
chr1	9160900	T	C	0.00893		.	FALSE	AluJb	SINE,Alu
chr1	214813487	A	G	0.00027	CENPF	+	FALSE
chr3	172115589	G	T	0.00435	FNDC3B	+	FALSE
chr5	43575009	T	C	0.00498	NNT-AS1	-	TRUE	AluSq2	SINE,Alu
chr3	45125566	C	T	0.00000	CDCP1	-	FALSE	Charlie8	SINE,Alu
chr1	156163906	C	T	0.00130	SLC25A44	+	FALSE
chr2	101186088	C	T	0.00817	PDCL3	+	FALSE
chr3	100467676	A	T	0.00067	TFG	+	FALSE
chr1	3730400	T	C	0.00018	CEP104	-	TRUE	AluSx3	SINE,Alu
chr2	120021785	T	C	0.00751	STEAP3	+	FALSE
chr2	191556844	T	C	0.00024	NAB1	+	FALSE
chr7	56079033	T	C	0.00300	PSPH	-	TRUE	AluYm1	SINE,Alu
chr1	33149375	A	G	0.00148	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	17199303	G	A	0.00062	LOC440570	+	FALSE
chr1	142805281	C	T	0.00242		.	FALSE
chr6	150047430	T	C	0.00568	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	36529419	A	G	0.00842		.	FALSE	AluJr	SINE,Alu
chr1	26608008	T	A	0.00496	SH3BGRL3	+	FALSE
chr1	171561203	T	G	0.00075	PRRC2C	+	FALSE
chr2	87777087	T	C	0.00737	LINC00152	+	FALSE
chr2	178406762	G	T	0.00708	AGPS	+	FALSE
chr4	17628548	A	G	0.00991		.	FALSE	AluSz	SINE,Alu
chr1	184761350	T	C	0.00754	FAM129A	-	TRUE	AluJo	SINE,Alu
chr14	74388908	T	C	0.00835	ZNF410	+	FALSE
chr7	154796171	G	A	0.00066	PAXIP1-AS1	+	FALSE	AluSx3	SINE,Alu
chr1	10520117	T	C	0.00188		.	FALSE	AluSx	SINE,Alu
chr1	45975286	A	G	0.00200	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr12	120898998	A	G	0.00081	GATC	+	TRUE	AluJr	SINE,Alu
chr5	37289051	T	C	0.00014		.	FALSE	AluSp	SINE,Alu
chr2	207027628	A	G	2.96026E-05	EEF1B2	+	FALSE
chr10	75008955	T	C	0.00058	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	52817434	T	C	0.00219	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr4	2940243	T	A	0.00028	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	10520178	T	C	2.78615E-06		.	FALSE	AluSx	SINE,Alu
chr1	9161203	T	C	3.69156E-05		.	FALSE	AluSx	SINE,Alu
chr1	71531596	A	G	1.07667E-05	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr13	46700519	C	A	0.00089	LCP1	-	FALSE
chr15	32820880	C	G	0.00672	WHAMMP1	-	FALSE
chr1	20976032	T	C	0.00010	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	19585207	G	A	0.00672	MRTO4	+	FALSE
chr1	85785548	C	T	0.00220	DDAH1	-	FALSE
chr1	24798520	A	C	0.00110	NIPAL3	+	FALSE
chr3	149459341	A	G	0.00042	COMMD2	-	FALSE
chr4	190883001	C	G	0.00319	FRG1	+	FALSE
chr6	24720271	T	G	0.00839		.	FALSE
chr4	109551180	C	A	0.00369	RPL34	+	FALSE
chr1	36386884	C	T	0.00375	AGO1	+	FALSE
chr12	56510696	A	T	0.00015	RPL41	+	FALSE
chr21	34728113	A	G	0.00531	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr1	6582221	T	C	0.00879	NOL9	-	TRUE	AluSq4	SINE,Alu
chr5	148382005	C	A	8.42472E-06	SH3TC2	-	FALSE
chr8	99053985	T	G	4.76792E-05	RPL30	-	FALSE
chr1	10518733	T	C	0.00399		.	FALSE	AluSx1	SINE,Alu
chr1	32661594	C	T	0.00528	TXLNA	+	FALSE	(T)n	SINE,Alu
chr1	16112795	A	G	0.00499	FBLIM1	+	FALSE
chr1	207247477	T	C	0.00078	PFKFB2	+	FALSE	MER5B	SINE,Alu
chr1	6582149	T	C	0.00173	NOL9	-	TRUE	AluSq4	SINE,Alu
chr1	165370475	G	C	0.00256	RXRG	-	FALSE
chr1	1595048	T	C	0.00495	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr17	73885274	T	C	0.00143	TRIM65	-	TRUE	AluSg	SINE,Alu
chr17	38632679	T	G	0.00044	TNS4	-	FALSE	(GT)n	SINE,Alu
chr1	10519947	T	C	0.00534		.	FALSE	AluJr	SINE,Alu
chr1	6683581	A	C	0.00126	PHF13	+	FALSE
chr1	118068558	G	A	0.00876		.	FALSE
chr1	16918486	C	T	0.00415	NBPF1	-	FALSE
chr1	145281543	C	T	0.00999	NBPF20,NOTCH2NL	+	FALSE
chr1	16912014	A	C	0.00199	NBPF1	-	FALSE
chr2	85776832	C	T	0.00514	GGCX	-	FALSE
chrX	135300016	T	C	0.00358	MAP7D3	-	TRUE	AluSz	SINE,Alu
chr8	30536554	T	C	0.00023	GSR	-	TRUE	AluSp	SINE,Alu
chr4	119526740	C	G	0.00435	LOC729218	+	FALSE
chr17	45761102	T	G	0.00296		.	FALSE
chr3	197611758	A	G	0.00958		.	FALSE	FLAM_C	SINE,Alu
chr1	227211026	C	G	0.00373	CDC42BPA	-	FALSE
chr2	232574807	C	G	0.00134	PTMA	+	FALSE
chr19	39926509	A	C	0.00986	RPS16	-	FALSE
chr3	14986111	T	C	0.00224	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	55317685	G	A	0.00121	DHCR24	-	FALSE	MIRb	SINE,Alu
chr6	158505088	A	G	0.00083	SYNJ2	+	FALSE
chr3	191114266	T	C	0.00258	CCDC50	+	FALSE
chr1	16928737	C	T	0.00796	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr16	56510331	G	T	0.00181	OGFOD1	+	FALSE
chr1	1650801	T	C	1.21097E-05	CDK11B,CDK11A	-	FALSE
chr1	113001409	C	T	2.24539E-06	CTTNBP2NL	+	FALSE	AluJr	SINE,Alu
chr3	126156660	C	G	0.00182	ZXDC	-	FALSE
chr1	28825331	A	G	0.00024	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	205115428	C	T	4.25965E-05	DSTYK	-	FALSE
chr1	145289875	T	C	0.00160	NBPF20	+	FALSE	MIR	SINE,Alu
chr1	24798499	T	C	0.00028	NIPAL3	+	FALSE	(T)n	SINE,Alu
chr15	42503333	T	C	0.00120	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr1	204521625	A	G	0.00808	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	19542401	T	C	0.00052	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	56763316	G	A	0.00830	ARHGEF3	-	FALSE
chr1	46076642	A	G	0.00552	NASP	+	TRUE	AluSx	SINE,Alu
chr1	10520145	T	C	0.00590		.	FALSE	AluSx	SINE,Alu
chr4	89180334	T	C	0.00224	PPM1K	-	TRUE	AluSx4	SINE,Alu
chr21	34728146	A	G	0.00070	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr2	23865260	T	C	0.00262	KLHL29	+	FALSE
chr3	170893070	G	A	0.00071	TNIK	-	FALSE
chr17	263417	C	T	0.00675	LOC105371430,C17orf97	+,-	FALSE
chr2	11674374	A	G	0.00559	GREB1	+	FALSE	Tigger9b	SINE,Alu
chr1	183105534	T	C	0.00424	LAMC1	+	FALSE
chr14	23795204	G	T	0.00938	BCL2L2-PABPN1,PABPN1	+	FALSE
chr19	3465142	T	C	0.00100	NFIC	+	FALSE
chr15	64657530	T	C	0.00580	KIAA0101	-	TRUE	FLAM_C	SINE,Alu
chr8	48890109	A	G	0.00750	MCM4	+	TRUE	AluJb	SINE,Alu
chr5	77655378	T	C	0.00555	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu
chr1	47746678	G	C	0.00328	STIL	-	FALSE
chr3	179117242	T	C	0.00011	GNB4	-	TRUE	AluSz	SINE,Alu
chr5	14696117	T	C	0.00807	OTULIN	+	FALSE
chr5	65108215	A	G	0.00052	NLN	+	FALSE
chr1	144873887	C	T	0.00088	NBPF20,PDE4DIP	+,-	FALSE
chr1	87213175	A	T	0.00082	SH3GLB1	+	FALSE
chr1	89648329	T	C	0.00093	GBP4	-	TRUE	AluYg6	SINE,Alu
chr15	42860120	A	G	0.00045	HAUS2	+	TRUE	AluSg	SINE,Alu
chr5	93018883	A	T	0.00393	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr2	206981832	T	C	0.00251		.	FALSE	AluJb	SINE,Alu
chr1	113672640	A	G	0.00629		.	FALSE	AluJb	SINE,Alu
chr1	9645101	C	T	0.00726		.	FALSE	(ATATTC)n	SINE,Alu
chr1	185069687	C	T	0.00072	RNF2	+	FALSE
chr1	45976260	C	T	0.00043	MMACHC	+	FALSE
chr7	127941334	C	T	0.00440	MGC27345	-	FALSE	MIR3	SINE,Alu
chr7	33060946	A	G	0.00542	NT5C3A	-	FALSE
chr1	28861636	G	A	0.00754	RCC1	+	FALSE	(GCATGT)n	SINE,Alu
chr1	28564612	C	A	0.00714	ATPIF1	+	FALSE
chr1	44035352	C	T	0.00170	PTPRF	+	FALSE
chr1	118420452	C	G	0.00713	GDAP2	-	FALSE
chr2	176791183	T	C	0.00252	LNPK	-	TRUE	MSTD	SINE,Alu
chr1	155695998	A	G	0.00574	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	33148213	A	G	0.00958	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr10	89005496	T	G	0.00138	NUTM2A-AS1	-	FALSE	MSTB1	SINE,Alu
chr5	184393	C	T	0.00228	PLEKHG4B	+	FALSE
chr12	993930	C	T	0.00163	WNK1	+	FALSE
chr1	8413317	A	C	0.00957	RERE	-	FALSE
chr4	10447986	T	A	0.00077	ZNF518B	-	FALSE
chr3	46623292	T	C	0.00408	TDGF1	+	FALSE	AluSx3	SINE,Alu
chr6	29911970	G	A	0.00284		.	FALSE
chr3	40353791	A	T	0.00419	EIF1B	+	FALSE
chr6	29912348	A	G	0.00429		.	FALSE
chr4	185309400	T	A	0.00250	IRF2	-	FALSE	(GGGAT)n	SINE,Alu
chr1	36068237	T	C	0.00867	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	206983132	T	C	0.00861		.	FALSE	AluJb	SINE,Alu
chr2	174090321	C	A	0.00273	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr6	72012435	A	G	0.00723	OGFRL1	+	FALSE	AluSg	SINE,Alu
chr1	28261662	A	G	0.00872	SMPDL3B	+	FALSE
chr2	87821033	C	A	0.00474		.	FALSE
chr2	61150192	C	A	0.00436	REL	+	FALSE	AluSz6	SINE,Alu
chr1	31532312	C	T	0.00215	PUM1	-	FALSE
chr1	78342729	A	G	0.00175	MIGA1	+	TRUE	FRAM	SINE,Alu
chr1	11846104	C	T	0.00297	C1orf167,MTHFR	+,-	FALSE	L1ME4a	SINE,Alu
chr1	32377391	G	A	0.00439	PTP4A2	-	FALSE
chr1	120163248	G	A	0.00204	ZNF697	-	FALSE
chr1	146650091	C	A	0.00361	PDIA3P1	+	FALSE
chr6	11185161	C	T	0.00297	NEDD9	-	FALSE
chr11	94801635	G	T	0.00844	SRSF8	+	FALSE
chr17	80280865	G	A	0.00984	SECTM1	-	FALSE
chr5	151041888	T	G	0.00636	SPARC	-	FALSE
chr10	129910475	T	G	0.00061	MKI67	-	FALSE
chr3	49053219	A	G	1.70535E-05	WDR6,DALRD3	+,-	FALSE
chr1	10520076	T	C	0.00763		.	FALSE	AluSx	SINE,Alu
chr1	46782446	A	G	0.00145	UQCRH	+	FALSE
chr1	144828795	C	G	0.00887	NBPF20,NBPF9	+	FALSE
chr4	17804852	T	C	0.00056	DCAF16	-	TRUE	AluSx	SINE,Alu
chr8	104082307	C	T	0.00675	ATP6V1C1	+	FALSE	L1ME3G	SINE,Alu
chr6	43747964	G	A	0.00542	VEGFA	+	FALSE
chr1	120164545	T	G	0.00058	ZNF697	-	FALSE
chr2	38522141	G	T	0.00109	ATL2	-	FALSE
chr13	96506664	A	G	5.36176E-05	UGGT2	-	FALSE
chr12	133333936	C	T	0.00726	ANKLE2	-	FALSE	MER58A	SINE,Alu
chr6	42856156	A	G	0.00105	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	26755536	A	G	0.00515	LIN28A	+	TRUE	AluSc	SINE,Alu
chr1	6282420	T	C	0.00779	ICMT	-	TRUE	AluSz	SINE,Alu
chr12	69237056	A	G	0.00372	MDM2	+	TRUE
chrX	9863112	A	G	0.00498	SHROOM2	+	FALSE
chr5	1574319	T	A	0.00158	SDHAP3	-	FALSE
chr1	145369476	A	G	0.00332	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	24796838	A	G	0.00484	NIPAL3	+	FALSE	MER5A	SINE,Alu
chr1	19586455	A	G	3.44081E-06	MRTO4	+	TRUE	AluSz	SINE,Alu
chr5	125961573	A	G	0.00217	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	6282361	T	C	0.00634	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	9161090	A	G	0.00068		.	FALSE	AluJb	SINE,Alu
chr1	1344893	A	G	7.94078E-08		.	FALSE	AluSg	SINE,Alu
chr3	195963398	A	G	0.00271		.	FALSE
chr1	148252049	A	C	0.00042	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	39317318	C	A	1.55431E-15	RRAGC	-	FALSE
chr1	9162224	T	C	0.00372		.	FALSE	AluSx	SINE,Alu
chr1	70904800	G	T	0.00678	CTH	+	FALSE
chr1	35650022	C	A	0.00762	SFPQ	-	FALSE
chr19	53914807	A	G	4.44644E-06	ZNF765	+	TRUE	AluSp	SINE,Alu
chr1	76227022	A	G	0.00759	ACADM	+	FALSE
chr16	24807247	G	A	0.00417	TNRC6A	+	FALSE
chr3	44772983	C	T	0.00795	ZNF501	+	FALSE
chr19	39440966	T	C	0.00011	FBXO17	-	FALSE
chr1	20826781	C	T	0.00110	MUL1	-	FALSE
chr1	94930345	G	A	0.00223	ABCD3	+	FALSE
chr1	1597403	C	T	0.00033	CDK11B,SLC35E2B	-	FALSE
chr1	163309219	A	T	0.00023	NUF2	+	FALSE
chr1	36067870	T	C	0.00513	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	12625747	G	A	0.00067	RAF1	-	FALSE
chr5	139876355	G	A	0.00815	ANKHD1,ANKHD1-EIF4EBP3	+	FALSE	GA-rich	SINE,Alu
chr3	185009713	G	T	0.00106	MAP3K13	+	FALSE
chr5	55235866	T	A	0.00073	IL6ST	-	FALSE

RBP	DDX6
Knock-Method	shRNA
RBP Family	DEAD
Biosample Name	hESCs
Tissue Type	Embryo
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE112383
Platform	GPL11154
Pubmed ID	31588046

DDX6 - Target Gene Network