RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	10192694	A	G	0.00277	VHL	+	TRUE	AluSx1	SINE,Alu
chr4	10099340	T	C	0.00000	WDR1	-	FALSE
chr3	10192608	A	G	0.00245	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	146250905	G	C	0.00444	NBPF20,NBPF10,NBPF25P	+	FALSE
chr1	206580231	A	G	0.00100	SRGAP2	+	FALSE
chr1	36068275	T	C	0.00098	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	42592138	G	A	0.00056	SEC22C	-	FALSE
chr3	10192709	C	T	0.00082	VHL	+	FALSE	AluSx1	SINE,Alu
chr1	32687473	T	G	0.00892	TMEM234,EIF3I	+,-	FALSE
chr4	139966801	A	G	0.00282	NOCT	+	TRUE	AluYj4	SINE,Alu
chr6	41900765	A	G	0.00256	BYSL	+	FALSE
chr3	15113842	T	C	0.00100	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	114449662	T	C	0.00223	DCLRE1B	+	FALSE
chr16	10625460	T	C	0.00015	EMP2	-	TRUE	AluSx	SINE,Alu
chr2	37330476	T	C	2.74271E-05		.	FALSE	AluSq2	SINE,Alu
chr2	127826533	A	G	0.00942	BIN1	-	FALSE
chr1	86852621	A	G	0.00930	ODF2L	-	FALSE
chr19	1037984	T	C	0.00908	CNN2	+	FALSE	(TT)n	SINE,Alu
chr1	86815303	T	C	0.00571	ODF2L	-	FALSE
chr2	39212565	T	G	0.00662	SOS1	-	FALSE
chr1	38158705	G	A	0.00168	CDCA8	+	FALSE
chr1	16890671	T	C	0.00097	NBPF1	-	FALSE
chr1	36068237	T	C	0.00291	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	184429155	A	T	0.00056	MAGEF1	-	FALSE
chr6	143661166	A	C	0.00536	AIG1	+	FALSE
chr19	53914418	A	G	0.00891	ZNF765	+	TRUE	AluSx	SINE,Alu
chr1	86049363	C	T	0.00064	CYR61	+	FALSE
chr11	31452788	A	G	0.00239	DNAJC24	+	TRUE	AluSx1	SINE,Alu
chr1	24934334	A	G	0.00031	NCMAP	+	TRUE	AluSz6	SINE,Alu
chr1	16096934	C	T	0.00336	FBLIM1	+	FALSE
chr1	109180686	C	T	1.31584E-05	FAM102B	+	FALSE
chr1	145116027	T	C	1.71852E-07	NBPF20,SEC22B	+	FALSE
chr2	223436459	A	T	1.48017E-05	FARSB	-	FALSE
chr2	37331207	T	C	0.00745		.	FALSE	AluSx1	SINE,Alu
chr5	149363218	A	G	0.00233	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr1	33148736	A	G	0.00525	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	165728775	C	T	5.75449E-06	TMCO1	-	FALSE
chr1	100489996	A	G	0.00069	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr1	15818090	T	C	0.00089	CASP9	-	TRUE	AluJb	SINE,Alu
chr8	30536146	T	C	1.15312E-06	GSR	-	TRUE	AluJr	SINE,Alu
chr1	184762627	T	C	0.00519	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	28836973	A	G	0.00289	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr10	75009651	T	C	0.00558	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr7	131241052	A	G	0.00663	PODXL	-	FALSE	(GGCGAC)n	SINE,Alu
chr1	180855948	G	A	0.00218	XPR1	+	FALSE
chr1	150783955	T	C	0.00077	ARNT	-	FALSE	(CA)n	SINE,Alu
chr1	10518616	G	A	0.00379		.	FALSE	AluSx1	SINE,Alu
chr1	67874697	T	C	4.44446E-05	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr9	135172412	A	G	0.00394	SETX	-	FALSE
chr3	88101339	T	C	0.00531	CGGBP1	-	FALSE
chr2	203742126	T	C	0.00451		.	FALSE	AluJb	SINE,Alu
chr6	24780892	A	C	0.00246	GMNN	+	FALSE
chr1	172547465	A	G	0.00725	SUCO	+	FALSE
chr1	32158374	T	C	0.00134	COL16A1	-	FALSE
chr1	212277618	T	G	0.00173	DTL	+	FALSE
chr2	9770610	A	G	0.00486	YWHAQ	-	FALSE
chr2	74442407	A	G	0.00384	MTHFD2	+	FALSE
chr3	195963400	T	G	0.00155		.	FALSE
chr1	40537923	G	A	0.00609	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	228880135	C	T	0.00026	RHOU	+	FALSE
chr7	75958151	G	C	0.00250	YWHAG	-	FALSE
chr1	113511408	A	G	0.00738		.	FALSE	AluY	SINE,Alu
chr1	26755510	A	G	0.00013	LIN28A	+	TRUE	AluSc	SINE,Alu
chr12	56215097	A	T	0.00051	DNAJC14	-	FALSE
chrX	16781275	A	G	0.00417		.	FALSE	AluJo	SINE,Alu
chr1	146374185	C	G	0.00376	NBPF20,NBPF10,NBPF25P,NBPF12	+	FALSE
chr3	170021211	A	C	3.61705E-05	PRKCI	+	FALSE
chr1	19542310	T	C	0.00112	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	36770607	T	C	0.00171	THRAP3	+	FALSE	(T)n	SINE,Alu
chr2	24223159	A	G	0.00717	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr19	19791273	A	G	0.00121	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr1	150337289	G	T	0.00298	RPRD2	+	FALSE
chr8	104343686	G	A	0.00031	FZD6	+	FALSE
chr5	81571271	T	G	0.00827	RPS23	-	FALSE
chr2	206983132	T	C	0.00861		.	FALSE	AluJb	SINE,Alu
chr1	86046472	G	T	0.00409	CYR61	+	FALSE
chr1	8412652	A	C	0.00929	RERE	-	FALSE
chr5	96129512	A	G	0.00997	ERAP1	-	FALSE
chr2	232319578	C	A	0.00844	NCL	-	FALSE	A-rich	SINE,Alu
chrM	9988	T	C	0.00011		.	FALSE
chr1	32661615	A	T	0.00454	TXLNA	+	FALSE
chr3	141667690	T	C	0.00018	TFDP2	-	TRUE	AluY	SINE,Alu
chr3	156259317	T	C	0.00189	SSR3	-	TRUE	AluSq2	SINE,Alu
chr3	45721827	C	A	0.00142	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr2	128620436	C	T	0.00342	AMMECR1L	-	FALSE
chr6	42854664	A	G	5.02680E-07	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr1	84373309	T	C	0.00627	TTLL7	-	FALSE
chr1	109475569	A	G	0.00046	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr12	52710721	G	C	0.00519	KRT83	-	FALSE
chr1	28825805	G	A	0.00115	PHACTR4	+	FALSE	AluSp	SINE,Alu
chr1	1273359	T	G	0.00254	DVL1	-	FALSE
chr3	124950419	C	A	0.00060	ZNF148	-	FALSE
chr3	93780109	G	C	8.09346E-05	DHFR2	-	FALSE
chr1	117530273	A	G	0.00601	PTGFRN	+	FALSE
chr3	197611095	A	G	0.00694		.	FALSE	AluSx1	SINE,Alu
chr1	22352040	G	T	0.00255	LOC101928043,LINC00339	+,-	FALSE
chr10	89623860	C	G	0.00071	PTEN	+	FALSE	(CGG)n	SINE,Alu
chr1	19543459	T	C	0.00540	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	7833544	T	C	0.00186	VAMP3	+	FALSE
chr8	144940222	A	C	0.00202	EPPK1	-	FALSE
chr20	35521047	T	A	0.00064	TLDC2,SAMHD1	+,-	FALSE
chr1	52498139	A	G	0.00193	TXNDC12,KTI12	-	FALSE
chr20	25428348	A	G	0.00121	GINS1	+	TRUE	AluSz	SINE,Alu
chr12	56510559	A	G	0.00137	RPL41	+	FALSE
chr2	207146631	C	A	9.52905E-05	ZDBF2	+	FALSE
chr1	118167515	C	T	4.87028E-05	FAM46C	+	FALSE
chr1	35644502	A	T	0.00702	SFPQ	-	FALSE	(A)n	SINE,Alu
chr1	9416151	G	A	0.00292	SPSB1	+	FALSE
chr1	65879488	A	C	0.00560	DNAJC6	+	FALSE
chr1	10517513	T	C	0.00982		.	FALSE	AluSx1	SINE,Alu
chr5	110463621	G	T	0.00786	WDR36	+	FALSE	(T)n	SINE,Alu
chr2	10580506	A	T	0.00294	ODC1	-	FALSE
chr1	28661656	A	G	0.00031	MED18	+	TRUE	AluSg	SINE,Alu
chr1	171751051	A	G	0.00522	METTL13	+	FALSE
chr2	73301687	G	A	0.00618	RAB11FIP5	-	FALSE
chr1	148951398	C	T	0.00068	LOC645166	+	FALSE
chr1	8021778	T	C	0.00495	PARK7	+	FALSE
chr8	27592828	G	A	0.00133	CCDC25	-	FALSE
chr1	160967855	T	C	0.00050	F11R	-	TRUE	AluSp	SINE,Alu
chr2	37429737	A	G	3.16512E-05	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr4	88059663	G	T	0.00165	AFF1	+	FALSE	(GT)n	SINE,Alu
chr12	69158881	A	G	0.00219	SLC35E3	+	TRUE	AluSp	SINE,Alu
chr2	37331841	C	T	0.00179		.	FALSE	L1MC4	SINE,Alu
chr5	10436681	G	T	0.00306	MARCH6	+	FALSE
chr17	10578246	A	G	0.00093		.	FALSE
chr1	26449336	A	G	0.00343	PDIK1L	+	FALSE
chr17	5288082	A	G	0.00184	RABEP1	+	TRUE
chr1	120163247	T	C	0.00680	ZNF697	-	FALSE
chr1	16932809	C	T	0.00887	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	186370281	C	G	0.00387	C1orf27,OCLM	+	FALSE
chr2	30863651	A	T	0.00366	LCLAT1	+	FALSE
chr1	28939803	C	T	1.27013E-09	TAF12	-	FALSE
chr3	148748198	G	A	3.62985E-05	HLTF	-	FALSE
chr3	109049177	A	T	0.00044	DPPA4	-	FALSE	AluSp	SINE,Alu
chr2	54896391	C	T	0.00162	SPTBN1	+	FALSE
chr2	203741654	T	C	0.00611		.	FALSE	AluJr	SINE,Alu
chr1	33086812	T	C	0.00250		.	FALSE	AluY	SINE,Alu
chr1	56961756	A	G	0.00265	PLPP3	-	FALSE
chr16	10625102	T	C	0.00129	EMP2	-	TRUE	AluSx3	SINE,Alu
chr7	137561083	T	C	0.00194	CREB3L2	-	FALSE	(GT)n	SINE,Alu
chr1	27992824	G	A	0.00025	IFI6	-	FALSE
chr1	161488402	T	A	0.00083	FCGR2A	+	FALSE
chr8	103841636	T	C	2.19081E-06	AZIN1	-	TRUE
chr1	204521616	A	G	4.81420E-06	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	25687621	A	T	0.00256	TMEM50A	+	FALSE
chr15	41591418	A	G	6.38388E-06	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr2	69688897	T	C	0.00888	AAK1	-	TRUE	AluSq2	SINE,Alu
chr1	16889642	T	C	0.00017	NBPF1	-	TRUE
chr1	222907790	C	T	0.00253	BROX	+	FALSE
chr11	44641025	G	A	0.00850	CD82	+	FALSE
chr2	217366499	A	G	0.00063		.	FALSE	AluSz	SINE,Alu
chr1	16918734	G	C	0.00600	NBPF1	-	FALSE
chr1	46828657	C	T	0.00378	NSUN4	+	FALSE
chr19	53914448	A	G	0.00583	ZNF765	+	TRUE	AluSx	SINE,Alu
chr1	110604747	G	A	0.00739	ALX3	-	FALSE
chr1	109746728	A	G	0.00171	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr19	18306990	G	C	0.00090	MPV17L2	+	FALSE
chr1	16890421	G	A	0.00024	NBPF1	-	FALSE
chr1	10517958	G	A	0.00149		.	FALSE
chr5	121400545	A	T	0.00740	LOX	-	FALSE
chr3	150261569	T	G	0.00173	SERP1	-	FALSE
chr2	128951766	A	G	0.00050	UGGT1	+	TRUE	AluSp	SINE,Alu
chr5	49692280	T	C	9.73531E-05	EMB	-	FALSE	L2c	SINE,Alu
chr1	78414329	G	A	0.00785	FUBP1	-	FALSE	A-rich	SINE,Alu
chr1	38327545	T	C	0.00602	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr1	182356399	A	G	0.00740	GLUL	-	FALSE
chr3	196670081	C	G	0.00500	NCBP2-AS2	+	FALSE
chr1	145369706	T	C	0.00186	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	6583593	T	C	0.00088	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	241796950	C	A	1.24743E-05	OPN3,CHML	-	FALSE
chr7	44918728	T	C	0.00192	PURB	-	TRUE	AluSg	SINE,Alu
chr1	161928771	G	A	0.00294	ATF6	+	FALSE
chr1	19585771	A	G	0.00029	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr1	145290874	C	T	0.00380	NBPF20	+	FALSE
chr1	19543457	T	C	0.00569	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr19	19791274	A	G	7.64703E-05	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr19	9672919	T	C	0.00097		.	FALSE	AluSx3	SINE,Alu
chr1	178887208	A	T	0.00239	RALGPS2	+	FALSE
chr2	203741065	T	C	2.92684E-06		.	FALSE
chr1	1419768	A	G	0.00250	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr2	128064422	C	T	0.00039	MAP3K2	-	FALSE
chr1	6162583	G	A	0.00281	CHD5	-	FALSE
chr1	12677547	G	A	0.00015	DHRS3	-	FALSE	(A)n	SINE,Alu
chr1	156692054	A	T	0.00471	ISG20L2	-	FALSE	AluY	SINE,Alu
chr18	60998527	C	G	0.00078	KDSR	-	FALSE	(AGAGAGAC)n	SINE,Alu
chr1	26308882	A	G	3.99595E-05	PAFAH2	-	FALSE
chr3	40578933	A	G	0.00947	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	204521616	A	G	0.00455	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	236716959	C	T	0.00727	HEATR1	-	FALSE
chr3	119212009	G	A	0.00241	POGLUT1	+	FALSE
chr1	119693495	A	G	0.00996	LOC101929147	+	TRUE	AluSx	SINE,Alu
chr1	146033660	C	A	0.00091	NBPF20,NBPF10,NBPF25P,NBPF11	+,-	FALSE
chr1	15832543	T	C	0.00553	CASP9	-	FALSE
chr19	9672979	T	C	0.00028		.	FALSE	AluSx3	SINE,Alu
chr3	196557274	C	T	0.00285	PAK2	+	FALSE
chr3	13670776	T	C	0.00336	FBLN2	+	FALSE
chr3	176742501	G	A	0.00707	TBL1XR1	-	FALSE	(A)n	SINE,Alu
chr12	56510709	G	A	0.00047	RPL41	+	FALSE
chr1	52375424	T	C	0.00109	RAB3B	-	FALSE
chr1	79109353	G	T	0.00214	IFI44L	+	FALSE	LTR26	SINE,Alu
chr2	86252043	T	C	0.00909	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	54692334	T	C	5.22151E-05	SSBP3	-	FALSE	(T)n	SINE,Alu
chr1	28835201	C	T	0.00371	SNHG3,RCC1,SNORA73B	+	FALSE	U17	SINE,Alu
chr5	74072638	G	A	0.00431	NSA2	+	FALSE
chr1	206635246	A	T	0.00283	SRGAP2	+	FALSE	(AC)n	SINE,Alu
chr1	62380298	G	A	0.00025	PATJ	+	FALSE
chr1	59120961	G	A	0.00383	MYSM1	-	FALSE
chr1	40537941	A	C	0.00216	CAP1	+	FALSE	(A)n	SINE,Alu
chr7	2394991	C	T	9.93448E-08	EIF3B	+	FALSE
chr5	78532658	C	T	0.00882	JMY	+	FALSE
chr3	195461463	A	G	0.00609		.	FALSE	AluJb	SINE,Alu
chr1	19585903	G	A	0.00575	MRTO4	+	FALSE	AluJr	SINE,Alu
chr2	176042865	G	T	0.00887	ATP5G3	-	FALSE
chr2	36776054	C	T	0.00117	CRIM1	+	FALSE
chr1	53680205	C	T	4.54902E-05	C1orf123	-	FALSE
chr16	88709698	C	T	0.00330	CYBA	-	FALSE
chr2	73460316	G	T	0.00368	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr1	154916602	C	A	0.00475	PBXIP1	-	FALSE	MIRb	SINE,Alu
chr6	90344605	T	C	0.00013	LYRM2	-	TRUE	AluSz6	SINE,Alu
chr8	97506373	C	G	0.00579	SDC2	+	FALSE	(CCCCGAG)n	SINE,Alu
chr1	109479978	G	T	0.00057	CLCC1	-	FALSE
chr1	16529016	C	T	0.00024	ARHGEF19	-	FALSE
chr18	691521	T	C	0.00150	ENOSF1	-	TRUE	AluJr	SINE,Alu
chr1	7737792	C	G	8.96820E-06	CAMTA1	+	FALSE
chr1	46165437	T	C	0.00090	IPP	-	TRUE	FRAM	SINE,Alu
chr1	36068243	T	C	0.00217	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	31491075	A	G	0.00061	EHD3	+	FALSE
chr2	174828621	A	C	0.00315	SP3	-	FALSE
chr2	198416734	A	T	0.00257	HSPE1-MOB4,MOB4	+	FALSE
chr12	56510707	G	A	0.00056	RPL41	+	FALSE
chr7	295960	T	A	2.17882E-07	FAM20C	+	FALSE
chr6	13790888	T	C	0.00442	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr1	9328243	A	G	0.00616	H6PD	+	TRUE	AluJr	SINE,Alu
chr10	22824828	A	T	0.00225	PIP4K2A	-	FALSE
chr17	17971644	G	T	0.00154	GID4	+	FALSE
chr1	16901668	T	C	0.00421	NBPF1	-	FALSE
chr2	234386134	A	G	0.00196	USP40	-	FALSE
chr2	206982257	T	C	0.00023		.	FALSE	AluSg7	SINE,Alu
chr4	73922978	T	C	0.00079	COX18	-	TRUE	AluSz	SINE,Alu
chr7	144060286	A	G	0.00674	ARHGEF5	+	FALSE
chr1	118166096	C	T	0.00861	FAM46C	+	FALSE
chr14	23794554	G	A	0.00966	BCL2L2-PABPN1,PABPN1	+	FALSE	A-rich	SINE,Alu
chr1	38279987	T	C	0.00980	MTF1	-	FALSE
chr5	151041885	G	T	0.00644	SPARC	-	FALSE
chr1	36299630	A	G	0.00828	AGO4	+	FALSE
chr1	16907328	G	T	0.00099	NBPF1	-	FALSE
chr17	65334767	T	C	3.33546E-08	PSMD12	-	TRUE	AluSq	SINE,Alu
chr20	25428750	A	G	3.17139E-06	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	20976078	T	C	0.00064	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr2	32447868	A	G	0.00663	SLC30A6	+	FALSE
chr4	2940485	T	C	0.00676	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr2	204301760	C	T	0.00313	RAPH1	-	FALSE
chr1	95392593	C	T	0.00173	CNN3	-	FALSE	(GGCGCG)n	SINE,Alu
chr15	91044380	G	C	0.00453	IQGAP1	+	FALSE
chr1	17326540	G	A	0.00120	ATP13A2	-	FALSE
chr1	145324364	C	G	0.00157	NBPF20,NBPF10	+	FALSE
chr1	54691910	A	G	0.00481	SSBP3	-	FALSE
chr1	16889985	T	C	0.00583	NBPF1	-	FALSE
chr1	120572572	C	T	0.00084	NOTCH2	-	FALSE
chr1	155851620	A	G	6.99218E-05	SYT11	+	TRUE	AluSq2	SINE,Alu
chr1	33086812	T	C	0.00812		.	FALSE	AluY	SINE,Alu
chr5	157185192	A	G	0.00835	LSM11	+	TRUE	AluSq	SINE,Alu
chr3	108298260	C	T	0.00042	KIAA1524	-	FALSE
chr2	178406769	A	T	0.00416	AGPS	+	FALSE
chr5	34906587	T	C	0.00442	RAD1	-	TRUE	AluJo	SINE,Alu
chr7	138764145	T	C	0.00399	ZC3HAV1	-	FALSE
chr1	74672926	T	A	0.00159	FPGT-TNNI3K,FPGT	+	FALSE	Kanga1d	SINE,Alu
chr1	15992470	G	A	0.00605		.	FALSE
chr7	116339672	C	T	0.00876	MET	+	FALSE
chr1	20977913	T	G	0.00201	PINK1,PINK1-AS	+,-	FALSE
chr7	91742142	C	A	0.00478	CYP51A1	-	FALSE	AluSx3	SINE,Alu
chr3	100043289	C	T	0.00049	TBC1D23	+	FALSE
chr7	100271438	G	T	0.00460	GNB2	+	FALSE
chr4	89625427	G	C	0.00025	HERC3	+	FALSE
chr1	148751869	A	G	0.00011		.	FALSE
chr1	114940216	T	G	0.00207	TRIM33	-	FALSE	(T)n	SINE,Alu
chr5	37291386	T	C	1.33550E-08		.	FALSE	AluSx3	SINE,Alu
chr1	54691921	G	A	0.00010	SSBP3	-	FALSE
chr5	149829075	A	G	0.00277	RPS14	-	FALSE
chr1	110136321	T	A	0.00721	GNAI3	+	FALSE
chr7	44047240	G	A	0.00588	POLR2J4,SPDYE1	+,-	FALSE
chr1	1419752	A	G	7.69134E-06	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr19	42376711	A	G	5.78075E-06		.	FALSE	AluSp	SINE,Alu
chr8	145159705	G	A	0.00383	MAF1	+	FALSE
chr1	53679878	T	C	0.00348	C1orf123	-	FALSE
chr17	57281034	A	G	0.00111	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	31732602	C	A	0.00336	SNRNP40	-	FALSE
chr1	27879800	T	G	0.00473	AHDC1	-	FALSE	MIRb	SINE,Alu
chr1	55207984	T	A	0.00099	MROH7-TTC4,TTC4	+	FALSE
chr6	150047370	T	C	0.00084	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	110023610	G	A	0.00636	SYPL2	+	FALSE
chr3	57548976	A	G	0.00132	PDE12	+	TRUE	FRAM	SINE,Alu
chr1	59142713	T	C	0.00246	MYSM1	-	FALSE
chr1	144931330	C	T	0.00295	NBPF20,PDE4DIP	+,-	FALSE
chr1	33149496	A	G	0.00504	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	35648842	G	A	0.00015	SFPQ	-	FALSE	AluSx3	SINE,Alu
chr1	10041432	A	G	0.00132	NMNAT1	+	TRUE	AluYj4	SINE,Alu
chr1	44463185	T	G	0.00397	SLC6A9	-	FALSE
chr1	145512937	A	G	0.00443	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	101399945	A	G	0.00965	RPL24	-	FALSE
chr3	184766301	T	C	0.00025	VPS8	+	FALSE
chr1	162494683	G	T	0.00269	UHMK1	+	FALSE	AluSg4	SINE,Alu
chr1	1597356	G	C	0.00995	CDK11B,SLC35E2B	-	FALSE
chr3	156258319	T	C	0.00909	SSR3	-	TRUE	AluYk3	SINE,Alu
chr2	32532809	A	G	0.00255		.	FALSE	AluSx1	SINE,Alu
chr1	120612168	C	T	0.00607	NOTCH2	-	FALSE
chr3	184550501	A	G	0.00508	VPS8	+	FALSE
chr3	195678003	C	G	0.00146		.	FALSE	L4_A_Mam	SINE,Alu
chr1	19585519	A	G	3.44907E-05	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr11	124954212	C	A	0.00827	SLC37A2	+	FALSE
chr1	183105534	T	C	0.00424	LAMC1	+	FALSE
chr4	52888026	A	C	0.00677	SGCB	-	FALSE
chr1	121133733	G	A	0.00467	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	8938276	T	A	0.00178	ENO1	-	FALSE
chr1	110049203	G	C	0.00209		.	FALSE
chr8	146035211	T	C	0.00116	ZNF517	+	FALSE	AluSx1	SINE,Alu
chr1	148561089	T	C	0.00975	NBPF15	+	FALSE
chr19	21474901	T	C	1.34658E-06	ZNF708	-	TRUE	AluSc	SINE,Alu
chr1	36522460	A	G	0.00407		.	FALSE	AluSc	SINE,Alu
chr1	160967938	T	C	0.00270	F11R	-	TRUE	AluSp	SINE,Alu
chr1	33148736	A	G	0.00849	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	121134169	A	T	0.00660	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	(TTTCCT)n	SINE,Alu
chr5	130536842	A	G	0.00016	LYRM7	+	TRUE	AluSx4	SINE,Alu
chr1	169799880	G	T	0.00118	C1orf112	+	FALSE
chr10	45499895	G	A	0.00255	ZNF22	+	FALSE
chr2	85776621	T	C	0.00194	GGCX	-	TRUE	AluSz6	SINE,Alu
chr1	8413839	A	G	0.00776	RERE	-	FALSE
chr2	206987108	T	C	0.00015		.	FALSE	AluSx	SINE,Alu
chr6	143382534	C	T	0.00252	AIG1	+	FALSE
chr17	5288081	C	T	0.00518	RABEP1	+	FALSE
chr2	204162036	A	G	0.00369	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr1	213071445	G	A	0.00233	FLVCR1	+	FALSE	MIR3	SINE,Alu
chr7	63808867	C	A	0.00556	ZNF736	+	FALSE
chr18	61565062	C	G	0.00207	SERPINB2	+	FALSE
chr1	569803	G	A	0.00166		.	FALSE
chr1	932618	C	G	0.00569		.	FALSE
chr5	79923912	T	C	0.00037	DHFR	-	TRUE	AluSp	SINE,Alu
chr1	40974799	T	C	0.00038	EXO5	+	FALSE
chr7	29961437	T	G	6.91541E-06	SCRN1	-	FALSE
chr15	22969232	G	A	0.00017	CYFIP1	+	FALSE
chr5	118173627	T	C	0.00075	DTWD2	-	TRUE
chr1	16907328	G	T	0.00973	NBPF1	-	FALSE
chr1	46827871	G	A	0.00860	NSUN4	+	FALSE
chr2	37331560	T	C	0.00040		.	FALSE	AluJb	SINE,Alu
chr21	34728146	A	G	0.00070	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr1	9990314	T	A	0.00017	LZIC	-	FALSE
chr1	148003749	T	C	0.00114	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr7	137561076	A	G	0.00488	CREB3L2	-	FALSE
chr1	65897981	G	A	0.00653	LEPR,LEPROT	+	FALSE
chr2	37331275	T	C	0.00884		.	FALSE	AluSx1	SINE,Alu
chr1	1001422	G	T	0.00998		.	FALSE	LTR13A	SINE,Alu
chr3	156259308	T	C	0.00013	SSR3	-	TRUE	AluSq2	SINE,Alu
chr3	17201871	T	C	0.00626	TBC1D5	-	FALSE
chr2	29135468	C	G	0.00262	WDR43	+	FALSE
chr14	50792933	C	T	0.00156	ATP5S	+	FALSE	AluSx	SINE,Alu
chr12	133298417	A	G	0.00084	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	51873951	G	A	0.00591	EPS15	-	FALSE
chr5	149829071	T	C	0.00360	RPS14	-	FALSE
chr9	132268440	A	G	3.40625E-05	LINC00963	+	TRUE	AluJb	SINE,Alu
chr3	10192825	A	G	0.00042	VHL	+	TRUE	AluSx1	SINE,Alu
chr5	34906547	T	C	0.00051	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	9910358	T	C	0.00083	CTNNBIP1	-	FALSE
chr3	156259229	T	C	0.00225	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	20826083	G	A	0.00289	MUL1	-	FALSE
chr1	10517456	T	C	0.00722		.	FALSE	AluSx1	SINE,Alu
chr3	172224303	A	G	0.00524	TNFSF10	-	FALSE
chr1	33149399	A	G	0.00148	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	10519932	T	C	0.00012		.	FALSE	AluJr	SINE,Alu
chr1	40214333	A	G	0.00112	PPIE	+	TRUE	AluSq2	SINE,Alu
chr1	36787880	C	T	0.00023	EVA1B	-	FALSE
chr1	212273639	C	T	0.00710	DTL	+	FALSE
chr1	44818549	C	T	0.00108	ERI3	-	FALSE
chr7	91502407	C	G	0.00183	MTERF1	-	FALSE
chr1	10519148	T	C	0.00611		.	FALSE	AluSx3	SINE,Alu
chr1	28859267	A	C	2.52971E-07	RCC1	+	FALSE
chr1	145513016	A	G	0.00069	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	52237970	C	T	0.00017	ALAS1	+	FALSE
chr1	9643028	A	G	0.00017		.	FALSE	AluSx	SINE,Alu
chr2	37331119	T	C	0.00758		.	FALSE	AluSx1	SINE,Alu
chr5	148873854	A	G	0.00453		.	FALSE
chr1	168218671	A	G	0.00974		.	FALSE	AluSz	SINE,Alu
chr1	22853141	G	A	0.00060	ZBTB40	+	FALSE
chr1	12071680	A	G	0.00127	MFN2	+	FALSE
chr1	182353198	A	T	0.00985	GLUL	-	FALSE
chr3	101576175	T	C	0.00246	NFKBIZ	+	FALSE
chr4	77082799	G	C	0.00148	SCARB2	-	FALSE
chr9	36216895	T	C	0.00130	GNE	-	TRUE	AluY	SINE,Alu
chr6	42856170	A	G	0.00141	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	32661594	C	T	0.00528	TXLNA	+	FALSE	(T)n	SINE,Alu
chr15	90819423	A	G	3.09408E-05		.	FALSE	AluSx	SINE,Alu
chr1	161338504	C	G	6.09223E-05		.	FALSE
chr2	64687665	C	A	0.00976	LGALSL	+	FALSE
chr1	70717293	G	A	0.00716	SRSF11	+	FALSE
chr16	10623660	T	C	0.00074	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	28920944	A	G	0.00446	RAB42	+	TRUE	AluSx	SINE,Alu
chr3	15113519	C	T	0.00108	RBSN	-	FALSE
chr11	69480680	T	C	0.00252	ORAOV1	-	FALSE	AluSx1	SINE,Alu
chr1	145689717	A	G	3.41980E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr4	39551140	T	C	1.44695E-08	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	91990450	A	T	0.00405	CDC7	+	FALSE	LFSINE_Vert	SINE,Alu
chr1	38463504	C	T	0.00068	FHL3	-	FALSE
chr16	57505656	T	G	0.00107	POLR2C	+	FALSE	(GGTGGG)n	SINE,Alu
chr1	212459257	A	G	0.00068	PPP2R5A	+	FALSE
chr1	179042550	A	G	0.00831	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	17730	C	A	0.00256	WASH7P	-	FALSE
chr1	32638096	C	T	0.00857	KPNA6	+	FALSE
chr1	11181327	C	T	0.00525	MTOR	-	FALSE
chr2	54896390	G	T	0.00110	SPTBN1	+	FALSE
chr1	55207988	G	A	0.00914	MROH7-TTC4,TTC4	+	FALSE
chr1	32661600	C	T	0.00584	TXLNA	+	FALSE	(T)n	SINE,Alu
chr1	201846632	C	T	7.46598E-05	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	220232066	T	C	0.00673	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr4	6676407	G	C	0.00178	LOC93622	+	FALSE
chr1	1684347	C	T	0.00550	NADK	-	FALSE
chr3	48787042	T	C	0.00799	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr12	125269489	C	T	0.00817	SCARB1	-	FALSE
chr6	44417136	A	G	0.00274	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	109812555	A	C	3.87556E-05	CELSR2	+	FALSE
chr1	19447819	T	C	0.00337	UBR4	-	FALSE
chr1	200522059	A	T	0.00163	KIF14	-	FALSE	AluSg	SINE,Alu
chr2	91847976	C	T	0.00010		.	FALSE	TAR1	SINE,Alu
chr4	2940485	T	C	2.93326E-08	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	33068221	A	G	0.00448	ZBTB8A	+	TRUE	AluY	SINE,Alu
chr13	31033317	C	T	0.00254	HMGB1	-	FALSE
chr1	16933643	A	G	0.00279	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	20982631	G	A	0.00133	DDOST	-	FALSE
chr15	90820095	A	G	6.27827E-07		.	FALSE	AluY	SINE,Alu
chr1	16889864	C	A	0.00094	NBPF1	-	FALSE
chr10	75008815	T	C	5.77576E-09	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr2	55452459	G	T	5.59903E-07	CLHC1	-	FALSE
chr1	245006499	C	G	0.00171	COX20	+	FALSE
chr1	27203728	A	T	0.00528		.	FALSE
chr8	61693942	G	A	0.00350	CHD7	+	FALSE
chr1	167396055	T	A	0.00031	POU2F1	+	FALSE
chr1	144918957	T	A	0.00484	NBPF20,PDE4DIP	+,-	FALSE
chr2	70316299	C	A	0.00650	PCBP1	+	FALSE
chr4	17804879	T	C	0.00863	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	327538	A	G	0.00010		.	FALSE
chr1	179326847	A	G	0.00031	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	78414285	T	A	0.00179	FUBP1	-	FALSE
chr2	64069566	A	G	0.00075	UGP2	+	FALSE
chr2	31557839	G	T	0.00014	XDH	-	FALSE	AluJr	SINE,Alu
chr1	144014068	T	C	0.00029		.	FALSE
chr1	93297595	G	T	0.00479	RPL5	+	FALSE
chr2	208619377	A	G	0.00769	CCNYL1	+	TRUE	FAM	SINE,Alu
chr3	183898428	T	G	0.00611	AP2M1	+	FALSE
chr1	36536016	G	A	8.76996E-09		.	FALSE
chr1	155582104	T	A	0.00099	MSTO1	+	FALSE
chr1	6311399	A	G	0.00126	GPR153	-	FALSE
chr7	77409288	A	G	7.47972E-05		.	FALSE	AluSc	SINE,Alu
chr2	74348998	A	G	0.00279		.	FALSE	AluSz	SINE,Alu
chr1	95362949	A	T	0.00012	CNN3	-	FALSE	(A)n	SINE,Alu
chr1	16954981	C	A	0.00876	CROCCP2	-	FALSE
chr2	24225542	A	G	0.00348		.	FALSE	AluSq2	SINE,Alu
chr1	16918717	C	T	0.00550	NBPF1	-	FALSE
chr1	46774783	A	G	0.00163	UQCRH	+	FALSE	(AGG)n	SINE,Alu
chr1	113212984	C	T	7.79033E-05	CAPZA1	+	FALSE	(T)n	SINE,Alu
chr3	125248854	A	C	0.00014	OSBPL11	-	FALSE
chr1	15394279	G	C	0.00215	KAZN	+	FALSE
chr1	32681797	C	T	0.00791	DCDC2B,TMEM234	+,-	FALSE
chr17	40723650	A	T	0.00250	MLX	+	FALSE
chr10	77157784	C	T	0.00027	ZNF503	-	FALSE	(T)n	SINE,Alu
chr1	77165735	A	G	0.00227		.	FALSE
chr1	36529575	A	G	2.40551E-05		.	FALSE	AluJr	SINE,Alu
chr6	42856917	A	G	0.00148	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	2303108	T	C	5.78895E-05	MORN1	-	FALSE	AluSp	SINE,Alu
chr3	44790624	T	C	0.00150	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	146649940	C	T	1.24118E-05	PDIA3P1	+	FALSE
chr17	36936846	C	T	0.00277	PIP4K2B	-	FALSE
chr2	8996326	C	T	0.00077	MBOAT2	-	FALSE
chr7	20178567	T	C	1.15326E-05	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	93603188	A	G	0.00374	MTF2	+	FALSE
chr1	6283306	T	C	2.62084E-05	ICMT	-	TRUE	AluSx3	SINE,Alu
chr5	40715440	A	C	0.00646	TTC33	-	FALSE
chr1	1251841	T	C	0.00915	CPSF3L	-	TRUE	AluSq2	SINE,Alu
chr1	33149400	A	G	0.00258	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	27678721	A	G	0.00030	SYTL1	+	TRUE	AluSx1	SINE,Alu
chr7	5410425	G	C	0.00043	TNRC18	-	FALSE	(CACCGC)n	SINE,Alu
chr1	184761312	T	C	0.00308	FAM129A	-	TRUE	AluJo	SINE,Alu
chr3	48787684	T	C	0.00494	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr7	38764464	T	C	0.00193	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	10520153	T	C	0.00398		.	FALSE	AluSx	SINE,Alu
chr3	196557357	G	T	0.00615	PAK2	+	FALSE
chr2	72968438	G	T	0.00147	EXOC6B	-	FALSE
chr2	113334414	A	G	0.00281	POLR1B	+	TRUE	AluSz	SINE,Alu
chr2	217366626	A	G	0.00057		.	FALSE	AluSz	SINE,Alu
chr1	19543465	T	C	0.00638	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	10093371	C	T	0.00264	UBE4B	+	FALSE
chr2	206983075	T	C	0.00083		.	FALSE	AluJb	SINE,Alu
chr2	128950497	A	G	4.96654E-06	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	52306082	A	T	0.00038	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr1	154317153	C	T	0.00483	ATP8B2	+	FALSE
chr1	93826611	C	G	0.00072	DR1	+	FALSE
chr12	51325280	A	G	0.00370	METTL7A	+	TRUE	AluSq2	SINE,Alu

RBP	ZNF598
Knock-Method	siRNA
RBP Family	Non-canonical_RBP
Biosample Name	U2OS
Tissue Type	Bone
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE116126
Platform	GPL18573
Pubmed ID	30917308

ZNF598 - Target Gene Network