RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	32799508	A	C	8.53764E-05	MARCKSL1	-	FALSE
chr7	158525786	G	A	0.00453	ESYT2	-	FALSE
chr15	65249466	A	G	2.07949E-05	ANKDD1A	+	TRUE	AluSz6	SINE,Alu
chr1	881627	G	A	2.43828E-05	NOC2L	-	FALSE
chr6	74303543	T	C	0.00031	SLC17A5	-	TRUE	AluJr	SINE,Alu
chr1	148556784	G	A	0.00100		.	FALSE
chr2	37327665	T	C	2.45403E-06		.	FALSE
chr1	104097685	C	T	0.00028	RNPC3,AMY2B	+	FALSE
chr2	10076828	A	G	0.00026		.	FALSE	AluJr	SINE,Alu
chr6	42854681	A	G	0.00011	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr1	40537918	T	A	0.00773	CAP1	+	FALSE
chr1	36068369	T	C	0.00207	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	7181560	G	A	0.00599	RNF144A	+	FALSE
chr3	5258431	G	A	3.44849E-09	EDEM1	+	FALSE
chr1	144829799	G	C	2.98942E-05	NBPF20,NBPF9	+	FALSE	L1MC4	SINE,Alu
chr14	24661020	C	T	0.00504	TM9SF1	-	FALSE	AluJb	SINE,Alu
chrX	123045103	A	G	0.00996	XIAP	+	TRUE	AluSp	SINE,Alu
chr1	36068325	T	C	5.92205E-06	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	118068558	G	A	0.00644		.	FALSE
chr1	87572817	C	T	0.00514	HS2ST1	+	FALSE
chr9	102744711	A	T	0.00675	ERP44	-	FALSE
chr1	193054575	C	G	0.00029	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr3	15483744	A	G	0.00083	EAF1	+	FALSE
chr4	120979130	T	C	0.00729		.	FALSE	AluSg4	SINE,Alu
chr7	20178490	T	C	0.00028	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr2	3627302	A	T	0.00021	RPS7	+	FALSE
chr9	130209956	A	T	0.00221	RPL12	-	FALSE
chr10	13320126	T	A	0.00830	PHYH	-	FALSE
chr1	2161135	A	G	0.00028	SKI	+	FALSE
chr16	25269014	G	C	0.00235		.	FALSE
chr19	42376675	A	G	0.00085		.	FALSE
chr3	195243006	C	A	7.17300E-06	PPP1R2	-	FALSE
chr1	10368092	A	C	0.00945	KIF1B	+	FALSE
chr1	16889414	T	C	0.00012	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr7	17384440	A	G	0.00373	AHR	+	TRUE	AluSx	SINE,Alu
chr7	6501833	A	T	0.00937	KDELR2	-	FALSE
chr2	37327670	T	C	0.00021		.	FALSE
chr1	46751319	G	A	0.00085	LRRC41	-	FALSE
chr1	1431295	T	C	0.00400	ATAD3B	+	FALSE
chr1	145293428	G	C	0.00855	NBPF20,NBPF10	+	FALSE
chr1	26152604	T	C	0.00954	MTFR1L	+	FALSE	AluSz6	SINE,Alu
chr16	18794286	C	T	0.00633	RPS15A	-	FALSE
chr12	64844149	A	G	0.00456		.	FALSE	AluJr4	SINE,Alu
chr5	177311217	T	C	0.00840	LOC728554	+	FALSE	A-rich	SINE,Alu
chr3	10004768	G	A	3.85967E-05	EMC3	-	FALSE	Tigger14a	SINE,Alu
chr1	161932324	A	G	0.00356	ATF6	+	FALSE
chr1	36067838	T	C	0.00348	PSMB2	-	TRUE	AluSz	SINE,Alu
chr4	248996	A	G	0.00123	ZNF876P	+	TRUE	AluYk3	SINE,Alu
chr5	149823795	A	T	0.00722	RPS14	-	FALSE
chr1	9162223	T	C	0.00778		.	FALSE	AluSx	SINE,Alu
chr8	61655619	C	T	0.00475	CHD7	+	FALSE
chr7	138732191	T	C	0.00746	ZC3HAV1	-	TRUE	MER5B	SINE,Alu
chr20	35520229	T	C	3.77169E-05	TLDC2,SAMHD1	+,-	FALSE	AluSx3	SINE,Alu
chr1	87328396	A	T	0.00148	SEP15	-	FALSE
chr1	155695998	A	G	0.00078	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	144595935	G	A	0.00636	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	1421531	C	A	0.00409	ATAD3B	+	FALSE
chr1	76229185	T	A	0.00280	ACADM	+	FALSE
chr1	162752670	G	A	0.00594		.	FALSE
chr1	100489571	G	A	1.40531E-05	SLC35A3	+	FALSE	AluSc	SINE,Alu
chr2	61278017	A	G	8.96590E-05	PEX13	+	TRUE	AluY	SINE,Alu
chr1	89447856	A	G	0.00218	KYAT3,RBMXL1	-	FALSE
chr1	36068369	T	C	0.00012	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	81571875	A	T	0.00027	RPS23	-	FALSE
chr12	80168993	G	T	0.00513	PPP1R12A	-	FALSE
chr1	109240643	A	C	0.00608	PRPF38B	+	FALSE
chr1	161160460	T	A	0.00298	ADAMTS4	-	FALSE	(CA)n	SINE,Alu
chr1	17345245	C	T	0.00812	SDHB	-	FALSE
chr16	74656352	T	C	0.00187	RFWD3	-	TRUE	AluJb	SINE,Alu
chr1	19543465	T	C	0.00638	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr17	26955330	A	C	0.00291	KIAA0100	-	FALSE
chr1	144604425	C	T	0.00269	NBPF20	+	FALSE
chr4	57327092	A	G	0.00091	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	54412181	T	C	0.00524	LRRC42	+	FALSE
chr1	58999651	T	G	0.00484	OMA1	-	FALSE
chr2	62095534	T	C	0.00021	CCT4	-	FALSE
chr1	92147985	C	A	0.00370	TGFBR3	-	FALSE
chr2	40336210	C	T	0.00828	SLC8A1-AS1	+	FALSE
chr1	204525672	A	G	0.00375	MDM4	+	TRUE	AluSz	SINE,Alu
chr12	98942621	A	G	4.05531E-12	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	145689568	A	G	0.00131	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	1647814	T	C	8.49337E-05	CDK11B,CDK11A	-	FALSE
chr5	37291636	T	C	0.00518		.	FALSE	AluSx3	SINE,Alu
chr2	37331555	T	C	0.00132		.	FALSE	AluJb	SINE,Alu
chr1	19542458	T	C	7.14858E-05	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	93603196	G	A	0.00627	MTF2	+	FALSE
chr1	55207984	T	A	0.00099	MROH7-TTC4,TTC4	+	FALSE
chr20	3848225	A	G	0.00075	MAVS	+	TRUE	AluJr	SINE,Alu
chr2	24227357	A	G	0.00295		.	FALSE	AluSc	SINE,Alu
chr1	246829742	T	C	0.00037	CNST	+	FALSE	(TGTG)n	SINE,Alu
chr6	13790822	T	C	0.00885	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr1	16890421	G	A	0.00024	NBPF1	-	FALSE
chr1	93298516	A	G	0.00493	FAM69A,RPL5	+,-	FALSE
chr3	57743246	G	A	0.00221	SLMAP	+	FALSE
chr1	157044418	G	C	0.00707		.	FALSE
chr1	6257826	T	C	0.00560	RPL22	-	FALSE
chr1	156713558	G	A	8.10199E-06	HDGF	-	FALSE
chr5	40832552	G	T	1.14652E-07	RPL37	-	FALSE
chr1	40430967	G	T	0.00567	MFSD2A	+	FALSE
chr1	47905554	C	G	0.00297	FOXD2	+	FALSE
chr3	16301791	G	A	4.37274E-05	DPH3	-	FALSE
chr1	6314743	C	T	0.00615	GPR153	-	FALSE
chr1	16933642	G	A	0.00679	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	24296708	A	G	0.00512		.	FALSE
chr5	140564263	C	T	0.00475	PCDHB16	+	FALSE
chr1	27202844	T	C	0.00146		.	FALSE	AluSq2	SINE,Alu
chr5	40832548	A	T	0.00048	RPL37	-	FALSE
chr1	9788153	G	A	0.00198	PIK3CD	+	FALSE	AluSx	SINE,Alu
chr7	2274209	T	C	0.00578	MRM2	-	FALSE	AluJr	SINE,Alu
chr1	148577409	C	A	0.00897	NBPF15	+	FALSE
chr4	1205668	C	A	0.00132	CTBP1-AS,CTBP1	+,-	FALSE	(A)n	SINE,Alu
chr1	100440563	A	G	0.00732	SLC35A3	+	FALSE	AluJb	SINE,Alu
chr1	86117191	T	C	1.34616E-06	ZNHIT6	-	TRUE	AluSg	SINE,Alu
chr4	39552175	T	C	0.00010	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	6583036	T	C	0.00296	NOL9	-	TRUE	AluSx4	SINE,Alu
chr10	5499824	A	G	0.00070	NET1	+	FALSE
chr3	56703746	A	C	0.00017	FAM208A	-	FALSE
chr1	100656265	C	T	0.00318	DBT	-	FALSE
chr5	130536842	A	G	0.00016	LYRM7	+	TRUE	AluSx4	SINE,Alu
chr7	12250939	G	A	0.00537	TMEM106B	+	FALSE
chr2	29135468	C	G	0.00262	WDR43	+	FALSE
chr8	141461185	A	G	0.00793	TRAPPC9	-	FALSE
chr4	7762848	G	A	4.98180E-08	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	10520439	T	C	0.00293		.	FALSE	AluSx1	SINE,Alu
chr2	24223291	A	G	0.00512	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr14	19684445	A	G	0.00351	DUXAP10	+	FALSE
chr12	125511242	A	G	0.00015	THRIL	-	FALSE	AluSx1	SINE,Alu
chr3	32524229	G	T	0.00359	CMTM6	-	FALSE
chr6	32121594	T	C	0.00104		.	FALSE
chr1	16889127	A	G	0.00213	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr3	88104168	C	T	0.00919	CGGBP1	-	FALSE
chr5	139931634	T	G	6.28154E-05	SRA1	-	FALSE
chr1	40214261	A	G	0.00879	PPIE	+	TRUE	AluSq2	SINE,Alu
chr1	169101257	A	T	0.00144	ATP1B1	+	FALSE
chr9	85861582	T	A	0.00604	FRMD3	-	FALSE	(TC)n	SINE,Alu
chr2	171699153	C	G	0.00247	GAD1	+	FALSE
chr8	73958240	G	A	0.00093	TERF1	+	FALSE
chr3	37366459	C	A	2.94197E-05	GOLGA4	+	FALSE
chr1	20510981	G	C	0.00197	UBXN10-AS1	-	FALSE
chr4	2940485	T	C	2.93326E-08	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr19	11256672	T	C	9.28647E-11	SPC24	-	TRUE	AluJr4	SINE,Alu
chr1	10042987	A	G	0.00149	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr2	99812817	A	G	0.00018	MRPL30	+	TRUE	AluJb	SINE,Alu
chr3	191114309	A	T	1.88175E-05	CCDC50	+	FALSE
chr5	37288767	T	C	0.00928		.	FALSE	FLAM_C	SINE,Alu
chr1	200521412	G	A	0.00588	KIF14	-	FALSE
chr1	33147928	A	G	9.58446E-05	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr2	86249930	T	C	0.00054	LOC90784	-	TRUE	AluJr	SINE,Alu
chr4	6644457	G	A	0.00059	MRFAP1	+	FALSE
chr1	23884661	G	A	0.00205	ID3	-	FALSE
chr1	24935369	A	G	0.00454	NCMAP	+	TRUE	AluJb	SINE,Alu
chr1	31905884	G	A	2.48126E-05	SERINC2	+	FALSE
chr1	31426815	A	G	0.00797	PUM1	-	FALSE
chr1	36067811	T	C	0.00467	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	25889571	G	A	0.00344	LDLRAP1	+	FALSE
chr6	99848757	C	T	0.00951	PNISR	-	FALSE	(TCTTTT)n	SINE,Alu
chr16	57505635	G	T	0.00974	POLR2C	+	FALSE
chr1	145513090	A	G	0.00017	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr6	74134781	T	C	0.00789		.	FALSE	AluSz	SINE,Alu
chr1	152187945	C	T	9.69718E-05	HRNR	-	FALSE	(GCCAGA)n	SINE,Alu
chr1	11083395	C	T	0.00616	TARDBP	+	FALSE
chr1	153533586	T	C	0.00358	S100A2	-	FALSE	Charlie18a	SINE,Alu
chr3	122291688	A	G	0.00597	DTX3L	+	FALSE	AluSz	SINE,Alu
chr8	11172477	C	T	0.00805	MTMR9	+	FALSE
chr3	45722287	A	G	0.00197	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	101541172	A	G	6.48917E-05	LOC102606465	+	TRUE	MLT1K	SINE,Alu
chr6	53363497	A	G	0.00106	GCLC	-	FALSE
chr1	67874689	T	C	7.42611E-10	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	117648345	A	G	0.00739		.	FALSE
chr3	170113718	T	C	0.00316	SKIL	+	FALSE
chr3	156259314	T	C	2.71784E-05	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	155851620	A	G	6.99218E-05	SYT11	+	TRUE	AluSq2	SINE,Alu
chr1	788844	C	G	0.00406	LINC01128	+	FALSE
chr9	19376249	G	T	0.00658		.	FALSE
chr6	31321806	C	T	6.66134E-15		.	FALSE
chr7	66105163	C	G	0.00594	KCTD7	+	FALSE
chr9	131457039	C	T	0.00148	SET	+	FALSE
chr3	39453160	G	A	0.00000	RPSA	+	FALSE
chr5	176026131	A	T	0.00979	GPRIN1	-	FALSE
chr15	85184841	T	C	0.00016	WDR73,SCAND2P	+,-	FALSE	AluSz	SINE,Alu
chr1	24995941	A	G	0.00382	SRRM1	+	FALSE
chr4	106767318	A	G	1.71247E-06	GSTCD	+	TRUE	AluJb	SINE,Alu
chr3	37094679	G	A	7.98870E-06	LRRFIP2	-	FALSE
chr1	158057633	C	G	0.00031	KIRREL	+	FALSE
chr1	569874	C	T	0.00072		.	FALSE
chr1	6683561	C	G	0.00732	PHF13	+	FALSE
chr1	145688671	A	T	0.00822	NBPF20,NBPF10,RNF115	+	FALSE
chr1	149913513	T	C	0.00495	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr2	201842323	T	C	0.00591	FAM126B	-	TRUE	AluJb	SINE,Alu
chr5	41917720	T	G	0.00727	C5orf51	+	FALSE
chr1	160966299	T	C	0.00033	F11R	-	TRUE	AluSg	SINE,Alu
chr1	33148721	A	G	0.00359	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr4	73957426	G	T	0.00434	ANKRD17	-	FALSE
chr1	148556784	G	A	0.00543		.	FALSE
chr1	28826128	A	G	0.00060	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr19	24103951	A	G	0.00082	ZNF726	+	TRUE	AluSg4	SINE,Alu
chr12	133314509	T	C	0.00229	ANKLE2	-	TRUE	AluJr	SINE,Alu
chr1	6681836	G	A	5.48259E-05	PHF13	+	FALSE
chr1	9328213	A	G	5.00055E-05	H6PD	+	TRUE	AluJr	SINE,Alu
chr7	107788257	C	T	0.00068	NRCAM	-	FALSE
chr5	141691248	C	T	0.00360	SPRY4	-	FALSE
chr3	49142142	G	T	6.70614E-05	QARS	-	FALSE
chr1	54231849	C	T	0.00812	NDC1	-	FALSE
chr4	152020779	G	T	0.00925	RPS3A	+	FALSE
chr2	84670484	T	C	0.00324	SUCLG1	-	TRUE
chr2	129024313	A	G	0.00612	HS6ST1	-	FALSE
chr1	33149425	A	G	0.00849	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	145368461	A	C	0.00542	NBPF20,NBPF10	+	FALSE
chr7	17384354	A	G	0.00282	AHR	+	TRUE	AluSx	SINE,Alu
chr5	134670071	A	T	0.00405	C5orf66,H2AFY	+,-	FALSE
chr1	16890428	T	A	0.00233	NBPF1	-	FALSE
chr2	17965699	C	T	0.00497	GEN1	+	FALSE	L1M4	SINE,Alu
chr1	27190857	C	T	0.00160	SFN	+	FALSE
chr1	6585331	T	C	0.00094	NOL9	-	TRUE	FAM	SINE,Alu
chr15	92715131	A	T	0.00306	SLCO3A1	+	FALSE
chr3	142772593	G	A	0.00135	U2SURP	+	FALSE
chr1	24999101	G	T	0.00100	SRRM1	+	FALSE
chr1	1595540	T	C	0.00042	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr7	44053729	T	C	0.00316	POLR2J4	-	FALSE	AluSg	SINE,Alu
chr1	31732602	C	A	0.00148	SNRNP40	-	FALSE
chr1	53679610	G	A	0.00119	CPT2	+	FALSE	AluSz	SINE,Alu
chr1	118420452	C	G	0.00713	GDAP2	-	FALSE
chr3	15483019	G	T	0.00751	EAF1	+	FALSE
chr1	38423055	C	A	0.00015	SF3A3	-	FALSE
chr2	128602913	G	A	0.00230		.	FALSE
chr1	117645998	A	G	0.00057		.	FALSE
chr8	99053985	T	G	4.76792E-05	RPL30	-	FALSE
chr3	113351702	A	G	0.00042		.	FALSE	7SLRNA	SINE,Alu
chr12	124069108	G	A	0.00635	TMED2	+	FALSE	(GCG)n	SINE,Alu
chr13	21547676	T	C	0.00403	LATS2	-	FALSE
chr1	19499560	T	C	0.00100	UBR4	-	FALSE
chr7	29962665	C	T	0.00059	SCRN1	-	FALSE
chr1	138356	C	A	0.00199	LOC729737	-	FALSE
chr19	3467751	C	A	0.00182	NFIC	+	FALSE	(TA)n	SINE,Alu
chr4	52753346	A	G	0.00782	DCUN1D4	+	TRUE	AluSc	SINE,Alu
chr1	16932429	C	G	0.00076	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	10519932	T	C	0.00547		.	FALSE	AluJr	SINE,Alu
chr7	156762446	G	T	0.00162	NOM1	+	FALSE
chr1	112266790	C	T	0.00892	FAM212B	-	FALSE
chr2	206861649	T	A	0.00066	INO80D	-	FALSE
chr2	675831	G	T	0.00731	TMEM18	-	FALSE
chr2	155555207	A	C	0.00073	KCNJ3	+	FALSE
chr12	69158881	A	G	0.00219	SLC35E3	+	TRUE	AluSp	SINE,Alu
chr1	6279957	A	G	0.00814	RNF207	+	TRUE	AluSp	SINE,Alu
chr6	3022544	T	C	0.00440	HTATSF1P2	-	TRUE	AluJr	SINE,Alu
chr1	19542401	T	C	0.00077	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	19543352	T	C	0.00715	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr5	154194459	C	A	0.00556	LARP1	+	FALSE
chr1	569782	T	C	0.00010		.	FALSE
chr19	18047216	C	A	0.00113	CCDC124	+	FALSE
chr12	48175093	A	G	0.00690	SLC48A1	+	FALSE
chr20	309186	A	G	0.00665	SOX12	+	FALSE	A-rich	SINE,Alu
chr1	109817245	C	T	2.70011E-05	CELSR2	+	FALSE
chr4	84525986	G	T	0.00081	GPAT3	+	FALSE	(TTGTT)n	SINE,Alu
chr1	10517512	T	C	0.00514		.	FALSE	AluSx1	SINE,Alu
chr2	227597697	G	T	0.00890	IRS1	-	FALSE
chr19	57804719	A	C	0.00361	ZNF460	+	FALSE
chr19	39874945	T	C	0.00335	SAMD4B	+	FALSE
chr1	45975345	A	G	0.00614	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	145290818	C	G	0.00931	NBPF20	+	FALSE
chr1	184761312	T	C	0.00077	FAM129A	-	TRUE	AluJo	SINE,Alu
chr1	226171400	T	C	0.00359	SDE2	-	TRUE	BC200	SINE,Alu
chr2	109301897	T	C	0.00306	LIMS1	+	FALSE
chr1	164473	T	C	0.00152		.	FALSE	AluSq2	SINE,Alu
chr17	12915009	G	A	0.00219	ELAC2	-	FALSE
chr1	179070646	T	C	0.00283	ABL2	-	TRUE	AluSz	SINE,Alu
chr3	30735330	G	T	0.00402	TGFBR2	+	FALSE
chr12	27955296	C	T	3.87648E-07	KLHL42	+	FALSE
chr1	148252049	A	C	0.00042	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	40722795	G	A	9.35494E-07		.	FALSE	Charlie2a	SINE,Alu
chr1	46093161	C	T	0.00628	GPBP1L1	-	FALSE
chr5	37290400	T	C	0.00282		.	FALSE	AluSz	SINE,Alu
chr19	17535871	A	C	0.00948	MVB12A	+	FALSE
chr5	52389817	T	A	0.00868	ITGA2	+	FALSE
chr5	159492107	A	T	0.00332	TTC1	+	FALSE
chr19	48753070	T	C	0.00214	CARD8	-	TRUE
chr1	20826781	C	T	1.74444E-05	MUL1	-	FALSE
chr1	145509493	A	G	0.00264	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr2	74381319	C	A	0.00912	MOB1A	-	FALSE	AluY	SINE,Alu
chr4	57326329	A	G	0.00077	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	32661615	A	T	0.00454	TXLNA	+	FALSE
chr3	40503729	A	G	5.91625E-05	RPL14	+	FALSE
chr1	54871874	C	T	2.61533E-07	SSBP3	-	FALSE
chr1	46075171	A	C	0.00280	NASP	+	FALSE	A-rich	SINE,Alu
chr3	40578831	A	G	0.00956	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	148251083	T	C	0.00041	NBPF8,NBPF14,NBPF9	-	FALSE	L1MC4	SINE,Alu
chr12	98943103	A	G	3.95351E-06	TMPO	+	TRUE	AluSz	SINE,Alu
chr2	46414708	G	A	0.00155	PRKCE	+	FALSE
chr3	20195395	C	T	3.65176E-06	KAT2B	+	FALSE
chr6	36894338	A	G	0.00607	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr5	140798639	G	C	3.89156E-05	PCDHGA1,PCDHGA2,PCDHGA3,PCDHGB1,PCDHGA4,PCDHGB2,PCDHGA5,PCDHGB3,PCDHGA6,PCDHGA7,PCDHGB4,PCDHGA8,PCDHGB5,PCDHGA9,PCDHGB6,PCDHGA10,PCDHGB7	+	FALSE
chr5	137842895	A	T	0.00038	ETF1	-	FALSE
chr1	109884775	T	G	0.00026	SORT1	-	FALSE
chr1	145509570	A	G	0.00028	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	11188109	C	A	0.00817	MTOR	-	FALSE
chr2	100897573	G	A	0.00231	LONRF2	-	FALSE
chr1	10517527	T	C	8.32015E-05		.	FALSE	AluSx1	SINE,Alu
chr2	105883650	T	G	0.00086	TGFBRAP1	-	FALSE
chr1	85484276	C	T	0.00168	MCOLN3	-	FALSE
chr1	183094547	T	C	0.00277	LAMC1	+	FALSE
chr6	150045852	T	C	0.00204	NUP43	-	TRUE	AluSq	SINE,Alu
chr1	28825433	A	G	0.00019	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	197477932	C	T	0.00488	DENND1B	-	FALSE
chr1	230974329	A	G	0.00355	C1orf198	-	FALSE
chr1	22854702	C	T	5.42952E-11	ZBTB40	+	FALSE
chr1	160967816	T	C	0.00162	F11R	-	TRUE	AluSp	SINE,Alu
chr11	75116737	G	A	0.00774	RPS3	+	FALSE
chr3	141667690	T	C	0.00018	TFDP2	-	TRUE	AluY	SINE,Alu
chr1	10042955	A	G	0.00430	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr11	67782827	G	A	0.00163	ALDH3B1	+	FALSE
chr2	85772408	G	A	0.00278	GGCX	-	FALSE
chr1	6477671	G	T	0.00620	HES2	-	FALSE	AluSx	SINE,Alu
chr1	26143698	T	A	0.00832	SEPN1	+	FALSE
chr6	42855962	A	G	0.00045	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	201846616	C	G	0.00209	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	145511929	A	G	0.00023	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	41281407	G	T	0.00288	CTNNB1	+	FALSE
chr1	85785557	T	A	0.00141	DDAH1	-	FALSE
chr16	81422951	T	C	0.00074		.	FALSE
chr3	195962244	G	T	0.00083		.	FALSE
chr1	28662205	C	T	0.00010	MED18	+	FALSE	AluSq2	SINE,Alu
chr2	37327702	T	C	0.00119		.	FALSE
chr1	39989926	T	C	0.00354	BMP8A,PPIEL	+,-	FALSE
chr1	160967899	T	C	0.00661	F11R	-	TRUE	AluSp	SINE,Alu
chr5	145666114	G	T	0.00766	RBM27	+	FALSE
chr3	23959343	A	T	0.00116	RPL15	+	FALSE
chr1	145688983	A	G	0.00101	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	114443458	A	G	0.00320	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr4	165998654	T	C	0.00953	TMEM192	-	TRUE	AluSg	SINE,Alu
chr16	48388258	A	G	8.02686E-05	MIR5095	+	TRUE	AluSz	SINE,Alu
chr2	37479023	G	A	0.00063	PRKD3	-	FALSE
chr4	6710356	T	C	0.00046	MRFAP1L1	-	FALSE
chr1	150937961	A	C	0.00060	CERS2	-	FALSE	G-rich	SINE,Alu
chr1	15818065	T	C	0.00372	CASP9	-	TRUE	AluJb	SINE,Alu
chr1	27203728	A	T	0.00528		.	FALSE
chr4	190883001	C	G	0.00859	FRG1	+	FALSE
chr4	10442610	T	C	0.00174	ZNF518B	-	FALSE
chr1	6282401	T	C	0.00806	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	204520000	A	G	0.00032	MDM4	+	TRUE	Charlie2a	SINE,Alu
chr8	23294732	C	T	0.00415	ENTPD4	-	FALSE
chr7	2294401	A	G	0.00035	SNX8	-	FALSE
chr4	2940164	T	C	0.00381	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	1570919	C	T	0.00161	CDK11B	-	FALSE
chr1	145512059	A	G	0.00053	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	9324451	C	T	0.00266	H6PD	+	FALSE
chr1	23835919	C	T	0.00872	E2F2	-	FALSE
chr1	148023067	C	T	0.00772	NBPF8	-	FALSE
chr3	125248855	C	A	0.00071	OSBPL11	-	FALSE
chr1	36068052	G	T	1.43241E-12	PSMB2	-	FALSE	L1ME4b	SINE,Alu
chr1	9161231	T	C	0.00481		.	FALSE	AluSx	SINE,Alu
chr4	57326126	A	G	0.00017	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	46828653	T	A	0.00920	NSUN4	+	FALSE
chr15	45775144	T	C	0.00867	SLC30A4	-	TRUE	AluJr	SINE,Alu
chr2	206983298	T	C	0.00811		.	FALSE	AluJb	SINE,Alu
chr1	201846632	C	T	7.46598E-05	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	1595602	A	G	9.14189E-05	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr2	37327662	T	C	0.00022		.	FALSE
chr1	16893691	C	A	0.00566	NBPF1	-	FALSE
chr2	1636053	A	G	0.00189	PXDN	-	FALSE
chr1	67881005	C	T	0.00776	SERBP1	-	FALSE
chr1	67874696	T	C	0.00839	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	121435624	C	T	0.00063	GOLGB1	-	FALSE
chr17	4929861	A	G	0.00705	KIF1C	+	TRUE	AluJb	SINE,Alu
chr2	99216531	A	G	0.00049	COA5	-	FALSE	MLT1K	SINE,Alu
chr1	145512951	A	G	4.65248E-05	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	42594019	C	T	3.51223E-05	SEC22C	-	FALSE
chr1	94982784	T	A	0.00179	ABCD3	+	FALSE
chr1	46075171	A	C	0.00140	NASP	+	FALSE	A-rich	SINE,Alu
chr2	118854088	C	T	0.00543	INSIG2	+	FALSE
chr1	145689491	A	G	0.00694	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	109465167	T	A	0.00233	GPSM2	+	FALSE
chr1	10517512	T	C	0.00498		.	FALSE	AluSx1	SINE,Alu
chr2	128602974	A	T	4.23982E-05		.	FALSE	AluSp	SINE,Alu
chr16	89623619	A	G	0.00275	SPG7	+	FALSE
chr1	36068210	T	C	0.00119	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	28859265	C	G	0.00030	RCC1	+	FALSE
chr1	204526554	A	G	0.00194	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	16889864	C	A	0.00020	NBPF1	-	FALSE
chr1	19934742	G	T	8.15259E-08	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr5	177023119	T	A	0.00295	TMED9	+	FALSE
chr7	129472355	G	C	0.00246	UBE2H	-	FALSE
chr2	20818286	A	C	0.00714	HS1BP3	-	FALSE
chr1	142660333	G	A	8.80387E-05		.	FALSE
chr2	86252049	T	C	0.00271	POLR1A	-	FALSE	AluSq2	SINE,Alu
chr4	84525985	T	G	0.00041	GPAT3	+	FALSE	(TTGTT)n	SINE,Alu
chr3	32997308	A	G	0.00082		.	FALSE	AluY	SINE,Alu
chr4	154257510	A	C	0.00121	TRIM2	+	FALSE	(A)n	SINE,Alu
chr1	6582221	T	C	6.47537E-05	NOL9	-	TRUE	AluSq4	SINE,Alu
chr1	6282401	T	C	0.00469	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	2434523	T	C	9.26798E-05	PLCH2	+	FALSE
chr1	109737090	G	A	0.00173	KIAA1324	+	FALSE
chr1	28661653	A	G	0.00483	MED18	+	TRUE	AluSg	SINE,Alu
chr1	6583066	T	C	0.00088	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	46828700	A	G	0.00093	NSUN4	+	FALSE
chr1	19934793	G	A	0.00068	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	145369556	A	G	0.00086	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr1	114940209	G	T	5.13716E-05	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	109818151	T	C	0.00855	CELSR2	+	FALSE
chr3	50327662	G	A	0.00707	IFRD2	-	FALSE
chr1	23240255	G	A	0.00873	EPHB2	+	FALSE
chr14	67852067	A	G	2.77652E-05	EIF2S1	+	TRUE	AluJb	SINE,Alu
chr1	31905889	A	G	0.00483	SERINC2	+	FALSE
chr1	36602176	G	T	0.00017	TRAPPC3	-	FALSE
chr1	15989141	C	G	0.00364		.	FALSE
chr16	9204015	C	T	0.00325	C16orf72	+	FALSE
chr5	125962354	A	G	3.71532E-05	PHAX	+	TRUE	AluSc	SINE,Alu
chr3	179117033	T	C	0.00019	GNB4	-	TRUE	AluSz	SINE,Alu
chr3	13670776	T	C	0.00336	FBLN2	+	FALSE
chr1	45975269	A	G	0.00827	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr5	43575020	T	C	8.37337E-06	NNT-AS1	-	TRUE	AluSq2	SINE,Alu

RBP	ZNF598
Knock-Method	siRNA
RBP Family	Non-canonical_RBP
Biosample Name	U2OS
Tissue Type	Bone
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE116126
Platform	GPL18573
Pubmed ID	30917308

ZNF598 - Target Gene Network