RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	183899832	C	T	1.28780E-06	AP2M1	+	FALSE
chr3	62282907	C	T	9.50704E-05	PTPRG-AS1	-	FALSE
chr2	131906031	C	T	0.00374	PLEKHB2	+	FALSE
chr1	19543457	T	C	0.00059	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr19	53571306	T	C	0.00481	ZNF160	-	FALSE
chr12	32794600	A	C	5.34959E-05	FGD4	+	FALSE
chr1	211923085	T	G	0.00674	LPGAT1	-	FALSE
chr5	81571875	A	T	0.00027	RPS23	-	FALSE
chr1	95658344	G	A	0.00100	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr1	234542410	C	A	0.00832	TARBP1	-	FALSE
chr1	157043632	C	T	0.00085		.	FALSE
chr3	39453160	G	A	0.00000	RPSA	+	FALSE
chr14	67852040	A	G	4.57409E-05	EIF2S1	+	TRUE	AluJb	SINE,Alu
chr4	57326291	A	G	0.00017	PAICS	+	TRUE	AluJr	SINE,Alu
chr2	45640374	C	A	0.00578	SRBD1	-	FALSE
chr1	109475572	A	G	0.00170	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr5	134236206	A	G	0.00065	TXNDC15	+	TRUE	AluSq	SINE,Alu
chr1	55316322	A	G	0.00172	DHCR24	-	FALSE
chr1	67874697	T	C	5.54610E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	76255228	G	A	0.00073	RABGGTB,SNORD45B	+	FALSE
chr1	19232017	T	G	0.00723	IFFO2	-	FALSE
chr1	155403831	A	G	0.00676	ASH1L,POU5F1P4	+,-	FALSE
chr1	75171751	T	C	0.00100	CRYZ	-	FALSE
chr2	96915238	T	C	2.48142E-05		.	FALSE	AluJr	SINE,Alu
chr4	39551167	T	C	0.00031	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr3	196612193	A	G	7.35500E-07	SENP5	+	FALSE
chr1	144909956	G	A	0.00310	NBPF20,PDE4DIP	+,-	FALSE
chr4	7761114	G	A	8.00249E-13	AFAP1,AFAP1-AS1	+,-	FALSE
chr6	109785909	T	C	0.00556	MICAL1,ZBTB24	-	TRUE	AluJr	SINE,Alu
chr2	130807905	G	T	0.00634	FAR2P1	-	FALSE
chr1	173009536	T	A	0.00519		.	FALSE
chr3	195242996	C	A	0.00136	PPP1R2	-	FALSE
chr17	43364288	A	G	0.00345	MAP3K14	-	FALSE
chr1	27202844	T	C	0.00076		.	FALSE	AluSq2	SINE,Alu
chr5	40832553	A	T	9.00390E-07	RPL37	-	FALSE
chr1	23636277	A	T	0.00632	HNRNPR	-	FALSE
chr3	99517479	T	C	8.06312E-05	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr6	74134823	T	C	0.00305		.	FALSE	AluSz	SINE,Alu
chr1	180247483	T	C	0.00167		.	FALSE
chr2	37327702	T	C	2.28397E-07		.	FALSE
chr1	10519947	T	C	0.00328		.	FALSE	AluJr	SINE,Alu
chr4	1387223	A	G	0.00155	CRIPAK	+	TRUE	AluSx	SINE,Alu
chr1	145509569	A	G	0.00405	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	145303971	A	G	0.00060	NBPF20,NBPF10	+	FALSE
chr7	44841237	T	A	0.00599	PPIA	+	FALSE
chr1	206580084	C	G	0.00104	SRGAP2	+	FALSE
chr4	57326126	A	G	0.00017	PAICS	+	TRUE	AluJr	SINE,Alu
chr2	217001882	T	C	0.00996	XRCC5	+	FALSE
chr1	2241376	C	T	0.01000	SKI	+	FALSE
chr9	116139063	G	C	0.00321	HDHD3	-	FALSE
chr9	117050998	G	A	0.00326	COL27A1	+	FALSE
chr1	95123291	G	C	0.00040	LINC01057	-	FALSE	LTR7Y	SINE,Alu
chr1	145513098	A	G	0.00171	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr5	177576463	A	T	0.00554		.	FALSE
chr1	145512944	A	G	0.00171	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr4	2070260	G	A	0.00724	NAT8L	+	FALSE	(TG)n	SINE,Alu
chr1	26131654	G	A	0.00149	SEPN1	+	FALSE
chr2	85132777	T	C	1.13350E-06	TMSB10	+	FALSE
chr3	191075902	C	T	1.38271E-08	CCDC50	+	FALSE
chr2	37331275	T	C	0.00884		.	FALSE	AluSx1	SINE,Alu
chr7	20177519	T	C	0.00885	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr4	7762313	C	G	5.86540E-10	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	153617980	A	G	0.00272	CHTOP	+	FALSE
chr12	6572048	A	G	0.00410	VAMP1	-	FALSE
chr1	6582761	T	C	0.00052	NOL9	-	FALSE	AluSg	SINE,Alu
chr2	36776056	T	A	0.00030	CRIM1	+	FALSE
chr8	128944725	G	C	0.00491	PVT1	+	FALSE
chrX	77083939	T	C	5.71267E-05	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	36642328	C	T	0.00971	MAP7D1	+	FALSE	GA-rich	SINE,Alu
chr11	69468187	G	T	0.00827	CCND1	+	FALSE	(T)n	SINE,Alu
chr3	105294534	A	G	1.10929E-06	ALCAM	+	FALSE
chr1	109605645	T	G	0.00478		.	FALSE	AluY	SINE,Alu
chr1	120539711	G	T	0.00627	NOTCH2	-	FALSE
chr1	19543457	T	C	4.71011E-07	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	9629305	A	T	0.00591	ADAM17	-	FALSE
chr1	53288870	A	G	0.00501	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	12082926	A	G	0.00229	MIIP	+	FALSE
chr1	109475629	A	G	0.00835	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	184661773	G	T	0.00082	EDEM3	-	FALSE
chr1	1593828	G	C	0.00348	CDK11B,SLC35E2B	-	FALSE
chr2	234183368	A	G	0.00369	ATG16L1	+	FALSE
chr1	225611661	C	T	0.00113	LBR	-	FALSE
chr19	12742506	A	G	2.74962E-05		.	FALSE	AluSx	SINE,Alu
chr4	3514539	G	A	6.66134E-16	LRPAP1	-	FALSE
chr19	59095456	A	G	0.00125	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr12	56510702	T	C	0.00052	RPL41	+	FALSE
chr1	108113839	T	C	0.00027	VAV3	-	FALSE
chr1	110049203	G	C	0.00530		.	FALSE
chr7	5567112	C	T	0.00000	ACTB	-	FALSE
chr5	151041886	T	G	0.00269	SPARC	-	FALSE
chr6	29704336	G	A	0.00207		.	FALSE	L1ME3A	SINE,Alu
chr1	211533352	A	G	0.00025	TRAF5	+	FALSE
chr1	155217438	A	T	0.00610	FAM189B	-	FALSE
chr19	11560438	A	G	7.61449E-05	PRKCSH	+	FALSE	AluSx	SINE,Alu
chr8	23049112	T	C	0.00774	TNFRSF10A	-	TRUE
chr1	1152310	C	T	0.00862	SDF4	-	FALSE
chr1	16861718	C	T	0.00891	LOC100132147	-	FALSE
chr3	57611237	A	G	9.49839E-05	DENND6A,PDE12	+,-	FALSE
chr1	16889864	C	A	6.58858E-05	NBPF1	-	FALSE
chr1	16259813	A	G	0.00475	SPEN	+	FALSE
chr1	3753136	A	T	0.00088	CEP104	-	FALSE
chr10	75008846	T	C	0.00135	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	162354204	C	A	0.00193	C1orf226	+	FALSE
chr1	206579936	A	G	0.00424	SRGAP2	+	FALSE
chr1	150937963	A	G	0.00658	CERS2	-	FALSE	G-rich	SINE,Alu
chr18	29410068	C	T	0.00807	TRAPPC8	-	FALSE
chr1	38001614	T	C	0.00222	SNIP1	-	TRUE	AluSx	SINE,Alu
chr4	128756738	A	G	0.00408		.	FALSE	AluSx	SINE,Alu
chr1	1595034	T	C	2.36116E-07	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr14	61112736	T	G	0.00418	SIX1	-	FALSE	(T)n	SINE,Alu
chr1	173864944	G	T	0.00415		.	FALSE
chr1	52381348	T	G	0.00500	RAB3B	-	FALSE
chr1	19953131	G	A	0.00486	MINOS1,MINOS1-NBL1	+	FALSE
chr6	150047376	T	C	0.00612	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	26887592	T	C	0.00354	RPS6KA1	+	FALSE
chr6	111588769	A	G	2.24603E-05	MFSD4B	+	TRUE	AluYm1	SINE,Alu
chr1	203839215	T	A	0.00692	SNRPE	+	FALSE
chr2	37331019	T	C	0.00597		.	FALSE	AluSx1	SINE,Alu
chr11	28134974	C	A	0.00479	METTL15	+	FALSE
chr16	24807247	G	A	0.00417	TNRC6A	+	FALSE
chr3	57126614	C	T	0.00358	IL17RD	-	FALSE	AluY	SINE,Alu
chr4	139091459	T	C	9.74854E-05	SLC7A11-AS1,SLC7A11	+,-	FALSE	(TA)n	SINE,Alu
chr1	44818525	T	C	0.00235	ERI3	-	FALSE
chr1	11710798	T	G	0.00328	FBXO2	-	FALSE	(CCT)n	SINE,Alu
chr15	42859922	A	G	0.00731	HAUS2	+	TRUE	AluSx1	SINE,Alu
chr1	36068294	T	C	0.00321	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	35319119	A	T	0.00111	SMIM12	-	FALSE	L1ME4c	SINE,Alu
chr7	91742141	T	C	0.00100	CYP51A1	-	FALSE	AluSx3	SINE,Alu
chr3	197682718	T	C	0.00163	IQCG,RPL35A	+,-	FALSE
chr3	176739663	A	G	5.46505E-07	TBL1XR1	-	FALSE
chr1	23636452	A	G	0.00294	HNRNPR	-	FALSE
chr1	22419433	T	G	0.00200	CDC42	+	FALSE
chr6	26095454	A	G	0.00284	HFE	+	TRUE	AluY	SINE,Alu
chr1	19234134	A	G	0.00027	IFFO2	-	FALSE
chr6	160100882	T	C	0.00494	SOD2	-	TRUE	AluSz	SINE,Alu
chr8	144827207	A	T	0.00038	FAM83H-AS1	+	FALSE	ERVL-B4-int	SINE,Alu
chr7	158719106	G	A	0.00048	WDR60	+	FALSE
chr3	14986110	T	C	1.11022E-16	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	145513114	A	G	6.80046E-05	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	228880466	G	A	0.00216	RHOU	+	FALSE
chrX	77083116	T	C	0.00658	MAGT1	-	TRUE	AluSg	SINE,Alu
chr1	17739586	G	A	0.00093	RCC2	-	FALSE
chr1	41236854	T	A	0.00075	NFYC	+	FALSE	(T)n	SINE,Alu
chr1	21766776	G	C	0.00343	NBPF3	+	FALSE
chr2	20450819	T	C	0.00807	PUM2	-	TRUE
chr1	33149408	A	G	0.00624	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	36602202	T	C	0.00122	TRAPPC3	-	FALSE
chr5	109190940	T	C	0.00173	MAN2A1	+	FALSE
chr3	44487862	G	A	0.00262	ZNF445	-	FALSE
chr1	1361641	C	T	0.00928	TMEM88B	+	FALSE
chr1	20826781	C	T	9.86003E-06	MUL1	-	FALSE
chr1	10519912	T	C	0.00613		.	FALSE	AluJr	SINE,Alu
chr1	145513017	A	G	0.00037	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	109535120	G	A	6.51608E-07	WDR47	-	FALSE
chr1	117648269	G	A	0.00988		.	FALSE	AluSz6	SINE,Alu
chr1	93826609	T	G	0.00073	DR1	+	FALSE
chr1	212277616	C	T	0.00248	DTL	+	FALSE
chr1	28826118	A	G	0.00023	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	87811103	T	G	0.00028	LMO4	+	FALSE
chr2	37331201	T	C	0.00291		.	FALSE	AluSx1	SINE,Alu
chr3	10290513	C	A	0.00577	TATDN2	+	FALSE
chr1	35649749	C	A	0.00597	SFPQ	-	FALSE
chr1	16909208	C	G	0.00482	NBPF1	-	FALSE
chr1	64095111	A	G	0.00201	PGM1	+	FALSE
chr1	100659985	T	C	0.00600	DBT	-	FALSE	AluSx3	SINE,Alu
chr19	3053116	G	C	0.00276	AES	-	FALSE
chr19	19792288	A	G	0.00379	ZNF101	+	TRUE	AluJb	SINE,Alu
chr4	106767318	A	G	1.71247E-06	GSTCD	+	TRUE	AluJb	SINE,Alu
chr1	161488421	G	T	0.00588	FCGR2A	+	FALSE	AluSz6	SINE,Alu
chr1	33148706	A	G	0.00038	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr3	196079390	T	C	2.00948E-06		.	FALSE	AluSx	SINE,Alu
chr1	210025751	G	A	0.00067	DIEXF	+	FALSE	Tigger4a	SINE,Alu
chr6	114178850	G	C	0.00045	MARCKS	+	FALSE	(TGCCGC)n	SINE,Alu
chr11	9771768	A	G	0.00891	SWAP70	+	TRUE	AluSx1	SINE,Alu
chr1	179042550	A	G	0.00831	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr19	46052996	T	C	2.38036E-05	OPA3	-	TRUE	AluSz6	SINE,Alu
chr1	45116985	C	T	0.00318	RNF220	+	FALSE
chr3	44790781	T	C	0.00887	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	45474230	G	A	0.00012	HECTD3	-	FALSE
chr10	28971535	T	A	0.00169	BAMBI	+	FALSE
chr1	9325676	C	T	9.85088E-06	H6PD	+	FALSE
chr2	37330487	T	C	0.00242		.	FALSE	AluSq2	SINE,Alu
chr5	118811533	G	A	0.00781	HSD17B4	+	FALSE
chr4	71859287	C	G	0.00557	DCK	+	FALSE
chr2	37330517	T	C	0.00324		.	FALSE	AluSq2	SINE,Alu
chr3	14175262	T	C	3.06250E-10	TMEM43	+	FALSE
chr1	144601045	C	T	0.00623	NBPF20	+	FALSE	L1MC2	SINE,Alu
chr1	9643195	A	G	0.00294		.	FALSE	AluSx	SINE,Alu
chr1	16096934	C	T	0.00336	FBLIM1	+	FALSE
chr2	86252049	T	C	0.00271	POLR1A	-	FALSE	AluSq2	SINE,Alu
chr1	6583515	T	C	0.00528	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	10520532	T	C	0.00013		.	FALSE	AluSx1	SINE,Alu
chr1	9163319	T	C	0.00936		.	FALSE	AluSp	SINE,Alu
chr1	160990875	T	C	9.42851E-06	F11R	-	FALSE
chr4	186081538	T	A	0.00077	CFAP97	-	FALSE
chrX	152916230	A	C	1.62471E-05	DUSP9	+	FALSE
chr3	172115476	A	G	0.00892	FNDC3B	+	FALSE	(A)n	SINE,Alu
chr9	115446659	T	C	0.00410	INIP	-	TRUE	AluJr	SINE,Alu
chr5	37290413	T	C	0.00467		.	FALSE	AluSz	SINE,Alu
chr1	148251083	T	C	0.00041	NBPF8,NBPF14,NBPF9	-	FALSE	L1MC4	SINE,Alu
chr3	49067308	G	A	0.00278	QRICH1	-	FALSE
chr1	1595077	T	C	0.00031	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr2	203741602	T	C	0.00581		.	FALSE	AluJr	SINE,Alu
chr1	9643106	A	G	0.00088		.	FALSE	AluSx	SINE,Alu
chr12	98942824	A	G	2.17067E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	11083183	G	T	0.00342	TARDBP	+	FALSE
chr4	88293887	G	A	0.00548	HSD17B11	-	FALSE
chr3	181430146	C	A	0.00256	SOX2-OT,SOX2	+	FALSE
chr1	28598287	C	T	0.00188	SESN2	+	FALSE
chr1	45279813	T	C	0.00614		.	FALSE	(TCTT)n	SINE,Alu
chr1	713710	G	C	0.00448	LOC100288069	-	FALSE	FRAM	SINE,Alu
chr4	5743512	T	C	0.00045	EVC	+	FALSE
chr1	11083395	C	T	0.00616	TARDBP	+	FALSE
chr17	45195951	T	C	0.00011	CDC27	-	TRUE	MADE1	SINE,Alu
chr3	170113815	G	T	0.00586	SKIL	+	FALSE
chr1	46049716	T	G	0.00761	NASP	+	FALSE
chr2	197000455	T	C	0.00426	STK17B	-	FALSE	AluSz	SINE,Alu
chr1	16112795	A	G	1.78234E-05	FBLIM1	+	FALSE
chr1	6282401	T	C	0.00665	ICMT	-	TRUE	AluSz	SINE,Alu
chr7	129963777	T	G	0.00874	CPA4	+	FALSE	(TG)n	SINE,Alu
chr11	125525572	A	C	0.00016	CHEK1	+	FALSE
chr2	219100202	C	T	0.00027	ARPC2	+	FALSE	AluJr	SINE,Alu
chr15	41590932	A	G	0.00055	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr19	59095469	A	G	5.44182E-05	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr1	62579758	G	A	0.00250	PATJ	+	FALSE
chr16	56510329	T	G	0.00247	OGFOD1	+	FALSE
chr19	39220786	C	A	0.00303	ACTN4	+	FALSE	A-rich	SINE,Alu
chr1	46032974	T	C	0.00141	AKR1A1	+	FALSE
chr1	179044110	A	G	0.00176	FAM20B	+	TRUE	AluSx	SINE,Alu
chr5	121400545	A	T	0.00740	LOX	-	FALSE
chr3	69038160	G	A	0.00557	EOGT	-	FALSE
chr1	36388197	C	T	0.00315	AGO1	+	FALSE
chr12	52631385	G	C	0.00777	KRT7	+	FALSE
chr1	148556784	G	A	0.00100		.	FALSE
chr16	67715890	T	C	9.92672E-05	GFOD2	-	TRUE	AluJr	SINE,Alu
chr1	16889624	T	C	0.00794	NBPF1	-	TRUE
chr10	54069186	C	T	0.00089	PRKG1-AS1	-	FALSE
chr17	57279264	A	G	0.00793	PRR11	+	TRUE	AluSq2	SINE,Alu
chr5	180682606	C	A	0.00042	CTC-338M12.4	+	FALSE
chr5	180665123	G	A	0.00259	RACK1	-	FALSE
chr1	148558269	A	G	0.00538	NBPF15	+	FALSE	AluJb	SINE,Alu
chr1	10519947	T	C	0.00534		.	FALSE	AluJr	SINE,Alu
chr15	42550445	T	C	0.00360	TMEM87A	-	FALSE
chr1	230416414	T	G	0.00360	GALNT2	+	FALSE
chr5	175802154	C	T	0.00883		.	FALSE	(CATC)n	SINE,Alu
chr1	19543456	T	C	0.00760	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr6	107113955	A	G	0.00265	QRSL1	+	TRUE	AluSg	SINE,Alu
chr14	19686329	G	A	0.00117	DUXAP10	+	FALSE
chr1	111991845	C	A	0.00803	WDR77,ATP5F1	+,-	FALSE
chr6	31110789	T	C	0.00798		.	FALSE
chr1	160966351	T	C	4.07282E-11	F11R	-	TRUE	AluSg	SINE,Alu
chr1	26143728	C	T	0.00800	SEPN1	+	FALSE	AluSx	SINE,Alu
chr16	28620957	T	C	0.00753	SULT1A1	-	TRUE	AluJr	SINE,Alu
chr8	144827206	A	T	0.00196	FAM83H-AS1	+	FALSE	ERVL-B4-int	SINE,Alu
chr2	71411975	A	C	0.00463	PAIP2B	-	FALSE
chr10	60047612	A	G	0.00015	CISD1	+	FALSE	(A)n	SINE,Alu
chr12	1611799	A	G	0.00156	LINC00942	+	FALSE
chr1	153909069	G	C	5.11201E-05	DENND4B	-	FALSE
chr1	9162362	T	C	0.00042		.	FALSE	AluSx	SINE,Alu
chr1	45244421	G	A	0.00925		.	FALSE
chr1	51822219	G	A	0.00325	EPS15	-	FALSE
chr21	34728068	A	G	0.00188	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr7	79848333	T	G	0.00322	GNAI1	+	FALSE
chr1	54692334	T	C	0.00021	SSBP3	-	FALSE	(T)n	SINE,Alu
chr7	5107572	A	C	0.00563	RBAK-RBAKDN,RBAK	+	FALSE	L1ME3A	SINE,Alu
chr17	37005835	T	C	2.39380E-05		.	FALSE	AluSg	SINE,Alu
chr7	128143606	A	G	4.95106E-06		.	FALSE	AluJr4	SINE,Alu
chr1	109856378	C	A	0.00804	SORT1	-	FALSE
chr1	100658578	G	A	0.00382	DBT	-	FALSE
chr1	100615003	G	A	0.00046	TRMT13,LRRC39	+,-	FALSE
chr2	37331841	C	T	0.00179		.	FALSE	L1MC4	SINE,Alu
chr6	42047553	A	G	0.00359	TAF8	+	TRUE	AluSz6	SINE,Alu
chr1	36068281	T	C	0.00331	PSMB2	-	TRUE	AluSc	SINE,Alu
chr8	146280802	C	T	0.00492	C8orf33	+	FALSE	LTR13	SINE,Alu
chr22	18572729	A	G	0.00228	PEX26	+	TRUE	AluYf1	SINE,Alu
chr6	72012435	A	G	0.00723	OGFRL1	+	FALSE	AluSg	SINE,Alu
chr1	10519936	T	C	0.00349		.	FALSE	AluJr	SINE,Alu
chr1	145509493	A	G	0.00264	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr3	184766301	T	C	0.00648	VPS8	+	FALSE
chr2	64687777	G	T	7.38315E-07	LGALSL	+	FALSE
chr1	16932428	C	G	0.00197	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	36789546	A	G	0.00623	EVA1B	-	FALSE	MIRb	SINE,Alu
chr3	49395692	G	A	0.00049	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr4	17628548	A	G	0.00991		.	FALSE	AluSz	SINE,Alu
chr1	85113229	A	G	0.00687	SSX2IP	-	FALSE
chr1	900720	A	T	0.00065	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	146495577	T	A	0.00072	LOC728989	-	FALSE
chr1	154317153	C	T	0.00567	ATP8B2	+	FALSE
chr15	63363386	G	T	0.00116	TPM1	+	FALSE
chr10	49609751	A	G	0.00979	MAPK8	+	FALSE
chr1	10520072	T	C	0.00226		.	FALSE	AluSx	SINE,Alu
chr1	43629982	C	T	0.00118	EBNA1BP2	-	FALSE
chr3	57542173	C	T	0.00020	PDE12	+	FALSE
chr1	9162423	T	C	0.00074		.	FALSE	AluSx	SINE,Alu
chr2	202038657	A	G	0.00354		.	FALSE	AluSx1	SINE,Alu
chr5	75469427	G	A	0.00155	SV2C	+	FALSE
chr1	16892135	G	A	0.00508	NBPF1	-	FALSE
chr4	165999189	T	C	0.00614	TMEM192	-	TRUE	FLAM_C	SINE,Alu
chr1	148561089	T	C	0.00975	NBPF15	+	FALSE
chr1	201488143	A	G	0.00492		.	FALSE	AluSz	SINE,Alu
chr1	16576295	G	A	0.00139	FBXO42	-	FALSE	A-rich	SINE,Alu
chr12	1611791	C	G	0.00971	LINC00942	+	FALSE
chr20	45839074	A	T	0.00019	ZMYND8	-	FALSE	(T)n	SINE,Alu
chr1	145369709	A	G	0.00258	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr1	32373437	G	A	1.22125E-14	PTP4A2	-	FALSE
chr12	46577921	G	T	0.00306	SLC38A1	-	FALSE
chr6	42061234	T	C	0.00170		.	FALSE	AluSx1	SINE,Alu
chr1	11089835	A	G	0.00065	MASP2	-	FALSE	AluSp	SINE,Alu
chr1	183155546	G	A	0.00103	LAMC2	+	FALSE
chr1	214638296	G	A	3.68085E-08	PTPN14	-	FALSE
chr1	36789546	A	G	0.00562	EVA1B	-	FALSE	MIRb	SINE,Alu
chr1	39317318	C	A	1.55431E-15	RRAGC	-	FALSE
chr1	31905884	G	A	2.48126E-05	SERINC2	+	FALSE
chr1	9163334	T	C	0.00889		.	FALSE	AluSp	SINE,Alu
chr1	36068231	T	C	0.00935	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	105258861	A	G	0.00030	ALCAM	+	FALSE
chr1	241792562	A	G	0.00800	OPN3,CHML	-	FALSE
chr1	36386884	C	T	0.00375	AGO1	+	FALSE
chr3	24019990	A	G	0.00308	NR1D2	+	FALSE
chr1	949608	G	A	0.00435	ISG15	+	FALSE
chr8	11700676	T	C	0.00534	CTSB	-	TRUE	AluSg	SINE,Alu
chr1	23636278	A	T	0.00442	HNRNPR	-	FALSE
chr2	3592638	T	C	0.00164	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr1	955597	G	T	3.81431E-06	AGRN	+	FALSE
chr1	36068295	T	C	0.00076	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	32557486	A	G	0.00525	TMEM39B	+	FALSE
chr12	98943192	A	G	0.00011	TMPO	+	FALSE	AluSz	SINE,Alu
chr1	70717293	G	A	0.00716	SRSF11	+	FALSE
chr5	37291482	T	C	0.00146		.	FALSE	AluSx3	SINE,Alu
chr1	150241230	G	T	7.51943E-05	APH1A	-	FALSE
chr1	1152309	A	T	0.00030	SDF4	-	FALSE
chr1	39470977	C	A	0.00347	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr1	120163007	G	A	0.00573	ZNF697	-	FALSE
chr7	129472333	C	T	0.00292	UBE2H	-	FALSE	(CA)n	SINE,Alu
chr1	16945504	C	T	0.00665	CROCCP2	-	FALSE
chr19	11945688	A	G	0.00083	ZNF440	+	TRUE	AluSp	SINE,Alu
chr1	28825418	A	G	0.00525	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	152186699	T	A	0.00891	HRNR	-	FALSE
chr1	46075715	A	G	0.00401	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	184762524	T	C	0.00260	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	6282426	T	C	0.00513	ICMT	-	TRUE	AluSz	SINE,Alu
chr8	12880299	A	G	1.70760E-05	KIAA1456	+	TRUE	AluJo	SINE,Alu
chr1	569991	T	G	0.00980		.	FALSE
chr1	10177553	C	G	0.00474	UBE4B	+	FALSE
chr3	179117241	T	C	0.00133	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	230979247	G	A	0.00137	C1orf198	-	FALSE
chr3	186838874	G	A	0.00972	RPL39L	-	FALSE
chr1	19810693	G	C	0.00042	CAPZB	-	FALSE
chr2	3622912	G	T	0.00000	RPS7	+	FALSE
chr2	24223256	A	G	0.00711	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	788840	T	C	0.00415	LINC01128	+	FALSE
chr1	26449336	A	G	0.00343	PDIK1L	+	FALSE
chr1	156563898	T	C	0.00216	NAXE	+	FALSE
chr6	42855957	A	G	0.00107	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	23833607	A	T	0.00818	E2F2	-	FALSE
chr6	42855182	A	G	0.00583	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr4	17802783	T	C	6.83941E-07	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	54355105	A	G	0.00325	YIPF1	-	FALSE	MIRb	SINE,Alu
chr7	6202695	A	C	0.00013	CYTH3	-	FALSE
chr14	74526976	T	C	0.00469	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr2	191556842	T	A	0.00812	NAB1	+	FALSE
chrM	10307	A	C	0.00046		.	FALSE
chr1	27992825	G	A	0.00192	IFI6	-	FALSE
chr1	20975992	T	C	0.00027	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	154554965	G	A	0.00019	ADAR	-	FALSE
chr2	208619320	A	G	0.00339	CCNYL1	+	FALSE	EutTc1-N1	SINE,Alu
chr1	16945027	T	C	0.00819	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr12	57923211	A	C	0.00071	MBD6	+	FALSE	(C)n	SINE,Alu
chr1	9740896	C	T	0.00078	PIK3CD,PIK3CD-AS2	+,-	FALSE	MLT1F1	SINE,Alu
chr5	149823789	G	T	0.00793		.	FALSE
chr1	15668319	G	A	0.00489	FHAD1	+	FALSE
chr2	11781593	G	T	0.00551	GREB1	+	FALSE
chr3	172115902	G	A	9.15134E-06	FNDC3B	+	FALSE
chr12	72096318	A	G	0.00547	TMEM19	+	TRUE	AluSz6	SINE,Alu
chr16	28296456	T	C	0.00772		.	FALSE	AluJb	SINE,Alu
chr1	165631670	T	G	0.00197	ALDH9A1	-	FALSE
chr1	155144757	T	C	0.00758	KRTCAP2	-	FALSE	Tigger19b	SINE,Alu
chr3	15112501	T	C	2.98131E-05	RBSN	-	TRUE	AluSq2	SINE,Alu
chr9	21331486	T	G	0.00675	KLHL9	-	FALSE
chr1	20945055	C	T	0.00269	CDA	+	FALSE
chr1	44818528	T	G	0.00486	ERI3	-	FALSE
chr1	28826223	A	G	0.00990	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr5	148873854	A	G	0.00453		.	FALSE
chr1	9328120	A	G	4.35354E-06	H6PD	+	TRUE	AluJr	SINE,Alu
chr3	12942852	C	A	0.00458	IQSEC1	-	FALSE
chr2	37331038	T	C	4.65669E-05		.	FALSE	AluSx1	SINE,Alu
chr4	129924977	C	A	0.00760	SCLT1	-	FALSE
chr3	48787640	T	C	0.00320	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr1	29519665	T	C	0.00680	MECR	-	TRUE	AluJb	SINE,Alu
chr1	24746451	A	G	0.00683	NIPAL3	+	TRUE	AluSc	SINE,Alu
chr15	59428230	G	A	0.00891	MYO1E	-	FALSE	MLT1B	SINE,Alu
chr1	94342564	C	A	0.00098	DNTTIP2	-	FALSE
chr4	17802956	T	C	0.00480	DCAF16	-	TRUE	AluSz	SINE,Alu
chr3	194124624	C	T	0.00502	ATP13A3	-	FALSE
chr3	129033736	T	C	0.00309	H1FX	-	FALSE
chr8	17796338	G	T	4.50000E-10	PCM1	+	FALSE
chr17	57281060	A	G	0.00026	PRR11	+	TRUE	AluSz	SINE,Alu
chr5	130537710	A	G	0.00899	LYRM7	+	TRUE	AluJb	SINE,Alu
chr3	10255002	C	G	0.00043	IRAK2	+	FALSE
chr4	110971055	A	T	0.00048	ELOVL6	-	FALSE
chr1	37948912	C	T	0.00084	ZC3H12A	+	FALSE
chr2	206983093	T	C	0.00118		.	FALSE	AluJb	SINE,Alu
chr1	28835937	A	G	0.00025	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	10518734	T	C	0.00143		.	FALSE	AluSx1	SINE,Alu
chr4	6718811	A	G	1.36854E-07	BLOC1S4	+	FALSE	FLAM_A	SINE,Alu
chr2	28002602	C	A	0.00037	MRPL33	+	FALSE
chr1	46829013	A	G	0.00360	NSUN4	+	FALSE
chr1	226333556	C	A	0.00250	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr1	77557891	T	C	0.00557	PIGK	-	FALSE
chr1	10518052	T	C	7.90759E-05		.	FALSE	AluJr	SINE,Alu
chr3	15114759	G	A	0.00595	RBSN	-	FALSE
chr1	160967755	C	T	0.00563	F11R	-	FALSE	(T)n	SINE,Alu
chr1	145293469	G	C	0.00888	NBPF20,NBPF10	+	FALSE
chr1	149576483	G	A	0.00323	LINC00623,LINC00869,LOC103091866	+	FALSE
chr3	196670086	T	G	1.91816E-05	NCBP2-AS2	+	FALSE
chr1	14106402	A	T	0.00914	PRDM2	+	FALSE
chr1	16929056	C	T	0.00398	NBPF1	-	FALSE
chr3	45721836	A	G	0.00714	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr8	145159705	G	A	0.00383	MAF1	+	FALSE
chr3	186502665	C	T	0.00637	EIF4A2	+	FALSE
chr1	19543456	T	C	0.00386	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	144618201	T	C	2.48995E-05	NBPF20,NBPF9	+	FALSE
chr1	120695202	C	A	0.00033		.	FALSE
chr8	48890293	A	G	0.00125	MCM4	+	TRUE	AluJb	SINE,Alu
chr2	25456869	G	A	0.00902	DNMT3A	-	FALSE
chr3	170113718	T	C	0.00316	SKIL	+	FALSE
chr1	109818161	C	T	0.00864	CELSR2	+	FALSE
chr1	65897981	G	A	0.00025	LEPR,LEPROT	+	FALSE
chr5	154196577	C	T	0.00906	LARP1	+	FALSE
chr1	28261658	T	G	0.00280	SMPDL3B	+	FALSE
chr2	220416967	C	T	0.00300	OBSL1	-	FALSE
chr1	145284883	A	G	0.00329	NBPF20,NOTCH2NL	+	FALSE	L2a	SINE,Alu
chr6	47501448	T	C	0.00017	CD2AP	+	FALSE
chr7	75163757	T	C	0.00448	HIP1	-	FALSE	AluSx1	SINE,Alu
chr3	45960556	C	T	0.00500	FYCO1	-	FALSE
chr16	57505637	T	A	0.00643	POLR2C	+	FALSE
chr1	22419434	T	G	0.00649	CDC42	+	FALSE
chr1	26755229	A	G	0.00318	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr1	19542458	T	C	1.01966E-05	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	87200770	C	T	0.00623	SH3GLB1	+	FALSE
chr1	145290818	C	G	0.00287	NBPF20	+	FALSE
chr1	36067752	T	C	9.44020E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	64114301	T	C	0.00955	PGM1	+	FALSE
chr1	207247477	T	C	0.00078	PFKFB2	+	FALSE	MER5B	SINE,Alu
chr5	140594467	G	A	0.00045	PCDHB13	+	FALSE
chr3	15112495	T	C	0.00030	RBSN	-	TRUE	AluSq2	SINE,Alu
chr3	10320968	T	A	0.00237	TATDN2	+	FALSE
chr2	70316226	A	C	0.00426	PCBP1	+	FALSE
chr1	35648844	C	A	0.00313	SFPQ	-	FALSE	AluSx3	SINE,Alu
chr1	46093409	A	C	0.00383	GPBP1L1	-	FALSE	A-rich	SINE,Alu
chr2	37330391	T	C	0.00134		.	FALSE	AluSq2	SINE,Alu
chr9	115447533	T	C	0.00326	INIP	-	TRUE	AluJb	SINE,Alu
chr1	78414310	C	A	9.26299E-05	FUBP1	-	FALSE
chr3	39452945	T	A	0.00462	RPSA	+	FALSE	MER5B	SINE,Alu
chr2	5837878	G	A	7.66453E-07	SOX11	+	FALSE
chr1	16787985	A	G	0.00053		.	FALSE	AluSz	SINE,Alu
chr1	156219450	A	G	0.00753	SMG5	-	FALSE
chr16	88709698	C	T	0.00330	CYBA	-	FALSE

RBP	DDX6
Knock-Method	shRNA
RBP Family	DEAD
Biosample Name	myoblasts
Tissue Type	Bone
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE124072
Platform	GPL11154
Pubmed ID	31588046

DDX6 - Target Gene Network