RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr2	232319615	A	T	8.19218E-06	NCL	-	FALSE
chr1	16890130	A	C	0.00728	NBPF1	-	FALSE
chr3	33430398	T	A	0.00025	UBP1	-	FALSE
chr17	46025078	A	G	0.00021	PNPO	+	TRUE	AluSc	SINE,Alu
chr12	56510696	A	T	0.00015	RPL41	+	FALSE
chr2	238253065	C	T	0.00914	COL6A3	-	FALSE
chr1	16096934	C	T	0.00336	FBLIM1	+	FALSE
chr5	150647719	T	C	0.00112	GM2A	+	FALSE	AluSc	SINE,Alu
chr8	11666384	C	T	0.00029	FDFT1	+	FALSE
chr5	149363414	A	G	0.00503	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr5	110463616	G	T	0.00264	WDR36	+	FALSE	(T)n	SINE,Alu
chr4	187628394	G	A	0.00000	FAT1	-	FALSE
chr8	12880299	A	G	1.70760E-05	KIAA1456	+	TRUE	AluJo	SINE,Alu
chr1	326499	A	G	0.00583		.	FALSE
chr2	217366515	A	G	0.00357		.	FALSE	AluSz	SINE,Alu
chr1	1595527	T	C	0.00139	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr2	64119875	G	A	0.00781	VPS54	-	FALSE
chr1	9330479	C	T	0.00352	H6PD	+	FALSE
chr2	85132777	T	C	1.13350E-06	TMSB10	+	FALSE
chr7	79848337	G	A	0.00037	GNAI1	+	FALSE
chr1	150548877	C	G	0.00071	MCL1	-	FALSE
chr19	58356540	A	G	0.00019	ZNF587B	+	TRUE	AluSx	SINE,Alu
chr1	10521254	T	C	0.00856	DFFA	-	TRUE	AluY	SINE,Alu
chr1	36067677	T	C	0.00655	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	45279813	T	C	0.00614		.	FALSE	(TCTT)n	SINE,Alu
chr1	10519947	T	C	0.00534		.	FALSE	AluJr	SINE,Alu
chr1	78029905	T	A	0.00256	ZZZ3	-	FALSE
chr1	9643028	A	G	0.00017		.	FALSE	AluSx	SINE,Alu
chr2	183642652	G	A	0.00309	DNAJC10	+	FALSE
chr1	1595048	T	C	0.00251	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	10177553	C	G	0.00474	UBE4B	+	FALSE
chr2	128064448	G	T	0.00602	MAP3K2	-	FALSE	(GT)n	SINE,Alu
chr1	158057633	C	G	0.00031	KIRREL	+	FALSE
chr1	36752811	C	T	0.00000	THRAP3	+	FALSE
chr1	61922501	A	C	0.00231	NFIA	+	FALSE	A-rich	SINE,Alu
chr3	112320485	T	C	0.00107	LINC01279	-	TRUE	AluJb	SINE,Alu
chr4	77996987	T	C	0.00240	CCNI	-	FALSE
chr3	100084203	C	G	0.00484	TOMM70	-	FALSE
chr14	31916784	T	C	2.67040E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	160966301	T	C	8.33949E-06	F11R	-	TRUE	AluSg	SINE,Alu
chr6	13788297	T	C	0.00077	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	10519190	T	C	0.00971		.	FALSE	AluSx3	SINE,Alu
chr5	126113463	A	C	0.00392	LMNB1	+	FALSE	(CGACGCG)n	SINE,Alu
chr1	19420619	C	G	0.00339	UBR4	-	FALSE
chr3	10004768	G	A	3.85967E-05	EMC3	-	FALSE	Tigger14a	SINE,Alu
chr19	53914807	A	G	4.44644E-06	ZNF765	+	TRUE	AluSp	SINE,Alu
chr1	113212976	C	T	0.00043	CAPZA1	+	FALSE
chr1	109855150	A	C	0.00251	SORT1	-	FALSE	A-rich	SINE,Alu
chr6	24719404	C	A	0.00024		.	FALSE
chr3	33481400	G	C	1.12603E-05	UBP1	-	FALSE
chr2	130900880	C	T	0.00044	CCDC74B	-	FALSE
chr5	74669972	C	T	0.00113	COL4A3BP	-	FALSE
chr1	10520505	T	C	0.00011		.	FALSE	AluSx1	SINE,Alu
chr1	179310439	C	T	0.00907	SOAT1	+	FALSE
chr6	74346347	A	G	4.16931E-07	SLC17A5	-	FALSE
chr2	17965390	T	C	0.00713	GEN1	+	FALSE	L1M4	SINE,Alu
chr2	217366590	A	G	0.00013		.	FALSE	AluSz	SINE,Alu
chr3	44791398	T	C	0.00081	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	19542310	T	C	0.00582	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	9160963	T	C	0.00130		.	FALSE	AluJb	SINE,Alu
chr2	219523584	C	T	0.00299	ZNF142	-	FALSE
chr1	67874697	T	C	0.00119	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	156692049	A	T	6.25184E-05	ISG20L2	-	FALSE
chr1	9163402	T	C	0.00014		.	FALSE	AluSp	SINE,Alu
chr1	16929327	C	T	0.00315	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr12	120898658	A	G	0.00372	GATC	+	TRUE	AluY	SINE,Alu
chr1	11089835	A	G	0.00065	MASP2	-	FALSE	AluSp	SINE,Alu
chr2	204298783	A	C	0.00179	RAPH1	-	FALSE	(AT)n	SINE,Alu
chr1	245006499	C	G	0.00238	COX20	+	FALSE
chr1	145282600	A	C	0.00391	NBPF20,NOTCH2NL	+	FALSE	MER126	SINE,Alu
chr1	22854702	C	T	5.42952E-11	ZBTB40	+	FALSE
chr1	205686523	G	T	0.00640	NUCKS1	-	FALSE
chr1	144053661	T	G	0.00232		.	FALSE
chr21	33974092	G	C	0.00865	C21orf59	-	FALSE
chr10	75008817	T	C	1.29877E-10	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	220231338	T	C	0.00762	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	24022914	A	G	0.00347	RPL11	+	FALSE
chr2	71376999	G	A	0.00546	MPHOSPH10	+	FALSE
chr9	86553587	G	A	0.00556	C9orf64	-	FALSE
chr4	39550085	T	C	3.55103E-05	UGDH-AS1,SMIM14	+,-	FALSE	FLAM_C	SINE,Alu
chr1	35644504	A	T	0.00242	SFPQ	-	FALSE
chr2	161130521	G	A	0.00454	RBMS1	-	FALSE
chr9	131872857	C	G	0.00151	CRAT	-	FALSE
chr1	16945227	G	T	0.00139	CROCCP2	-	FALSE
chr1	145513094	A	G	0.00633	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	206579798	T	C	0.00476	SRGAP2	+	FALSE
chr19	2917287	C	A	0.00243	ZNF57	+	FALSE
chr1	39990456	G	A	0.00749	BMP8A,PPIEL	+,-	FALSE	L2b	SINE,Alu
chr1	10521238	T	C	0.00232	DFFA	-	TRUE	AluY	SINE,Alu
chr13	100638107	A	T	0.00841	ZIC2	+	FALSE
chr2	192555178	C	T	0.00112	LOC105747689	+	FALSE
chr5	74669972	C	T	0.00711	COL4A3BP	-	FALSE
chr12	125514122	A	G	1.22592E-05		.	FALSE	(TA)n	SINE,Alu
chr2	206987629	T	C	0.00208		.	FALSE	AluJb	SINE,Alu
chr3	183898428	T	G	0.00611	AP2M1	+	FALSE
chr6	43747963	G	C	0.00274	VEGFA	+	FALSE
chr3	45721934	A	G	0.00639	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	206635244	T	A	0.00188	SRGAP2	+	FALSE
chr6	99848757	C	T	0.00951	PNISR	-	FALSE	(TCTTTT)n	SINE,Alu
chr1	23833607	A	T	0.00818	E2F2	-	FALSE
chr1	15899345	T	C	0.00300	AGMAT	-	TRUE	AluSx3	SINE,Alu
chr2	36706788	C	G	0.00481	CRIM1	+	FALSE
chr2	206981874	T	C	0.00060		.	FALSE	AluJb	SINE,Alu
chr2	99992822	A	C	0.00266	EIF5B	+	FALSE
chr1	67874859	T	C	0.00209	SERBP1	-	TRUE	AluSx	SINE,Alu
chr12	125513788	A	G	0.00592		.	FALSE	AluSx1	SINE,Alu
chr1	10521200	T	C	3.54723E-07	DFFA	-	TRUE	AluY	SINE,Alu
chr12	133298917	A	G	0.00612	PGAM5	+	TRUE	AluSg	SINE,Alu
chr7	44841646	A	C	0.00316	PPIA	+	FALSE	AluJr	SINE,Alu
chr4	57326262	A	G	2.33397E-05	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	2335871	G	A	0.00298	RER1	+	FALSE
chr4	7764017	T	C	0.00028	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	1717439	T	A	0.00663	GNB1	-	FALSE
chr1	100440553	A	G	0.00553	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr1	145369550	A	G	0.00031	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	47716046	A	T	0.00696	STIL	-	FALSE
chr1	3545199	G	C	0.00188	TPRG1L	+	FALSE
chr17	80899281	G	A	0.00053	TBCD	+	FALSE
chr2	37334139	T	C	0.00146	EIF2AK2	-	TRUE	AluSz	SINE,Alu
chr1	70718280	A	C	0.00946		.	FALSE
chr2	24224040	A	G	0.00882		.	FALSE	AluSp	SINE,Alu
chr1	19542310	T	C	0.00532	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	10521170	T	C	0.00498	DFFA	-	TRUE	AluY	SINE,Alu
chr1	201299882	T	G	0.00145	PKP1	+	FALSE
chr7	17384354	A	G	0.00908	AHR	+	TRUE	AluSx	SINE,Alu
chr9	125609939	A	T	0.00693		.	FALSE
chr7	107789927	T	C	0.00111	NRCAM	-	FALSE
chr1	9163319	T	C	0.00936		.	FALSE	AluSp	SINE,Alu
chr3	137787192	T	C	0.00764	DZIP1L	-	FALSE
chr2	87821033	C	A	0.00474		.	FALSE
chr5	87566382	T	A	0.00997	TMEM161B-AS1	+	FALSE
chr3	10356760	G	A	0.00951	SEC13	-	FALSE	MIRb	SINE,Alu
chr1	19282314	G	T	0.00158	IFFO2	-	FALSE
chr1	213244381	G	A	0.00345	RPS6KC1	+	FALSE
chr1	44423703	C	T	1.17684E-14	IPO13	+	FALSE
chr17	79529443	T	C	0.00153	NPLOC4	-	TRUE	AluSx1	SINE,Alu
chr2	118854108	A	T	0.00568	INSIG2	+	FALSE
chr6	16305357	C	T	0.00559	ATXN1	-	FALSE
chr1	153932212	G	C	0.00340	SLC39A1	-	FALSE
chr1	182993025	C	T	0.00490	LAMC1	+	FALSE
chr4	57326873	A	G	0.00342	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	20976032	T	C	9.95086E-05	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr2	47387306	G	T	0.00026	CALM2	-	FALSE
chr1	160967854	T	C	0.00150	F11R	-	TRUE	AluSp	SINE,Alu
chr3	148863151	A	G	0.00062	HPS3	+	FALSE
chr1	27533879	G	A	0.00877		.	FALSE
chr1	1169973	G	A	0.00783	B3GALT6	+	FALSE
chr4	109551183	T	A	0.00270	RPL34	+	FALSE
chr1	109816462	C	T	0.00083	CELSR2	+	FALSE
chr1	11084104	G	A	0.00116	TARDBP	+	FALSE
chr2	109383604	G	A	0.00331	RANBP2	+	FALSE
chr1	45975584	T	C	0.00327	MMACHC	+	FALSE	AluSx4	SINE,Alu
chr1	33071146	A	G	0.00899	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr2	48025764	C	T	0.00810	MSH6	+	FALSE
chr1	19542250	T	C	3.30618E-05	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	66058513	A	G	0.00091	LEPR	+	FALSE
chr1	10520331	C	T	0.00065		.	FALSE	AluSx1	SINE,Alu
chr13	20247038	A	G	0.00391	MPHOSPH8	+	TRUE	AluJb	SINE,Alu
chr1	6160958	A	G	0.00967	KCNAB2	+	FALSE
chr2	217366194	C	A	0.00359		.	FALSE
chr14	75203036	A	G	0.00837	FCF1	+	TRUE	AluSx	SINE,Alu
chr3	57549504	A	G	0.00384	PDE12	+	TRUE	AluJb	SINE,Alu
chr1	46075191	C	A	0.00056	NASP	+	FALSE	A-rich	SINE,Alu
chr1	145688664	A	T	0.00081	NBPF20,NBPF10,RNF115	+	FALSE
chr1	20976759	C	T	2.31016E-05	PINK1,PINK1-AS	+,-	FALSE
chr1	79125148	G	A	0.00203	IFI44	+	FALSE
chr1	3548832	G	C	0.00464	WRAP73	-	FALSE
chr5	151041876	G	T	5.29152E-05	SPARC	-	FALSE
chr1	1595539	T	C	0.00053	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr5	156905300	A	C	0.00870	ADAM19	-	FALSE	MER92B	SINE,Alu
chr5	149829075	A	G	0.00277	RPS14	-	FALSE
chr11	63394018	C	A	0.00103	ATL3	-	FALSE
chr1	33149414	A	G	0.00722	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	243289448	G	A	0.00036	CEP170	-	FALSE
chr3	181430141	G	C	0.00086	SOX2-OT,SOX2	+	FALSE
chr1	6730782	C	T	0.00807	DNAJC11	-	FALSE
chr1	16889866	G	A	0.00051	NBPF1	-	FALSE
chr1	10438014	A	C	0.00046	KIF1B	+	FALSE
chr1	214525603	A	G	0.00047	PTPN14	-	FALSE
chr1	152187183	C	A	0.00373	HRNR	-	FALSE
chr9	125609941	G	A	0.00043		.	FALSE
chr1	54493197	T	C	0.00064	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr2	191065246	T	A	0.00594	C2orf88	+	FALSE
chr1	28662212	A	G	0.00098	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	10519048	T	C	0.00637		.	FALSE	AluSx3	SINE,Alu
chr5	130537666	A	G	0.00329	LYRM7	+	TRUE	AluJb	SINE,Alu
chr1	205129319	G	A	0.00177	DSTYK	-	FALSE
chr21	37789767	A	G	0.00236		.	FALSE	AluSx	SINE,Alu
chr1	174983207	T	G	0.00681	MRPS14	-	FALSE
chr17	79780692	T	C	0.00116	MCRIP1	-	TRUE
chr1	150704483	T	C	0.00028	CTSS	-	TRUE	AluJo	SINE,Alu
chr4	56291623	G	T	0.00490	TMEM165	+	FALSE
chr19	11256725	T	C	7.46879E-09	SPC24	-	TRUE	AluJr4	SINE,Alu
chr19	58356376	A	G	0.00061	ZNF587B	+	TRUE	AluSx	SINE,Alu
chr3	88104168	C	T	0.00919	CGGBP1	-	FALSE
chr1	36068275	T	C	0.00625	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	32799512	A	T	0.00929	MARCKSL1	-	FALSE
chr12	69237021	A	G	0.00229	MDM2	+	TRUE
chr3	197682718	T	C	0.00163	IQCG,RPL35A	+,-	FALSE
chr17	7124772	G	A	0.00175	ACADVL	+	FALSE
chr7	12250939	G	A	0.00537	TMEM106B	+	FALSE
chr3	10193358	A	G	0.00317	VHL	+	TRUE	L1ME4a	SINE,Alu
chr15	84873635	C	T	0.00059	LOC440300,GOLGA2P7	+,-	FALSE
chr1	87213190	A	C	0.00054	SH3GLB1	+	FALSE
chr7	4809333	A	G	0.00067	FOXK1	+	TRUE	AluSx1	SINE,Alu
chr2	224844864	A	G	7.12020E-05	SERPINE2	-	FALSE	L2b	SINE,Alu
chr1	21808159	G	A	0.00011	NBPF3	+	FALSE
chr1	153520954	C	T	0.00910	LOC101928034,S100A3	+,-	FALSE
chr1	146650337	G	T	0.00589	PDIA3P1	+	FALSE
chr3	39453160	G	A	0.00000	RPSA	+	FALSE
chr1	153533813	A	T	0.00451	S100A2	-	FALSE
chr7	6501830	G	A	0.00110	KDELR2	-	FALSE
chr13	110407579	T	G	0.00751	IRS2	-	FALSE	(T)n	SINE,Alu
chr16	10624953	T	C	0.00056	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	3761479	C	T	0.00226	CEP104	-	FALSE
chr1	28835847	A	G	5.60567E-05	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	1653046	T	A	0.00686	CDK11B,CDK11A	-	FALSE
chr3	15113042	C	T	4.09809E-05	RBSN	-	FALSE
chr1	10519982	T	C	0.00572		.	FALSE	AluJr	SINE,Alu
chr18	61565062	C	G	0.00207	SERPINB2	+	FALSE
chr1	988503	A	T	8.91206E-06	AGRN	+	FALSE
chrX	84532996	T	G	0.00801	POF1B	-	FALSE
chr2	201774209	T	C	0.00534		.	FALSE	AluSz	SINE,Alu
chr17	57279258	A	G	0.00095	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	92862457	A	G	0.00974		.	FALSE	AluSp	SINE,Alu
chr5	52251222	G	T	0.00808		.	FALSE	(GATA)n	SINE,Alu
chr15	63363386	G	T	0.00116	TPM1	+	FALSE
chr1	1344998	A	G	5.29904E-05		.	FALSE	AluSg	SINE,Alu
chr14	76045220	T	C	0.00421	LOC102724153,FLVCR2	+,-	FALSE
chr1	200375846	G	T	0.00061	ZNF281	-	FALSE	(T)n	SINE,Alu
chr1	77557891	T	C	0.00557	PIGK	-	FALSE
chr16	11931208	A	T	0.00316	RSL1D1	-	FALSE
chr1	16933753	G	A	0.00609	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	9160976	T	C	0.00015		.	FALSE	AluJb	SINE,Alu
chr1	1668943	A	C	0.00640	SLC35E2	-	FALSE
chr1	11782984	A	G	0.00107		.	FALSE	AluSx	SINE,Alu
chr1	16889041	C	T	0.00429	NBPF1	-	FALSE
chr4	128757345	A	G	0.00040		.	FALSE	AluY	SINE,Alu
chr3	99517485	C	A	0.00088	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr1	36789546	A	G	0.00562	EVA1B	-	FALSE	MIRb	SINE,Alu
chr2	178406768	T	A	0.00416	AGPS	+	FALSE
chr7	35737649	G	A	0.00566	LOC101930085	+	FALSE	AluSz	SINE,Alu
chr5	151041888	T	G	0.00636	SPARC	-	FALSE
chr1	33086876	T	C	0.00672	ZBTB8OS	-	TRUE	AluY	SINE,Alu
chr1	24022910	G	A	0.00036	RPL11	+	FALSE
chr4	57326917	A	G	5.41162E-06	PAICS	+	TRUE	AluSx1	SINE,Alu
chr6	74133914	T	C	0.00014		.	FALSE	AluY	SINE,Alu
chr1	23636278	A	T	0.00442	HNRNPR	-	FALSE
chr10	77807027	T	C	0.00089	C10orf11	+	FALSE
chr1	44438961	A	G	0.00013	DPH2	+	FALSE	MER3	SINE,Alu
chr1	144930596	C	A	0.00356	NBPF20,PDE4DIP	+,-	FALSE
chr1	10520180	T	C	0.00267		.	FALSE	AluSx	SINE,Alu
chr2	55255314	A	C	0.00638	RTN4	-	FALSE
chr2	37327702	T	C	0.00179		.	FALSE
chrX	123045407	A	G	0.00153	XIAP	+	TRUE	AluJo	SINE,Alu
chr19	13884084	A	G	0.00843	MRI1	+	TRUE	AluSz	SINE,Alu
chr1	19565338	C	T	0.00631	LOC101927895,EMC1	+,-	FALSE
chr4	128756704	A	G	0.00271		.	FALSE	AluSx	SINE,Alu
chr1	179327008	A	G	0.00168	SOAT1	+	TRUE
chr1	3546137	A	C	0.00778	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr22	18571457	A	G	0.00493	PEX26	+	TRUE	AluSz	SINE,Alu
chr3	196728813	C	T	0.00068	MELTF	-	FALSE
chr5	149013587	G	A	0.00102	ARHGEF37	+	FALSE	L2d	SINE,Alu
chr1	35648840	G	T	0.00049	SFPQ	-	FALSE	AluSx3	SINE,Alu
chr5	149363219	A	G	0.00866	SLC26A2	+	FALSE	AluJr	SINE,Alu
chr1	1431165	C	T	0.00392	ATAD3B	+	FALSE
chr1	45975266	A	G	0.00188	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr4	25236017	T	C	0.00291	PI4K2B	+	FALSE
chr1	44447006	T	C	0.00767	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr3	122447574	A	C	0.00224	PARP14	+	FALSE
chr2	227662565	A	C	0.00028	IRS1	-	FALSE
chr2	101622881	C	A	1.48865E-05	RPL31	+	FALSE
chr1	67874697	T	C	0.00022	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	15113655	T	C	0.00025	RBSN	-	TRUE	AluSz6	SINE,Alu
chr9	70483778	A	T	0.00026	CBWD5	-	FALSE
chr1	36386884	C	T	0.00024	AGO1	+	FALSE
chr5	125961426	A	G	0.00434	PHAX	+	TRUE	AluSz6	SINE,Alu
chr16	10623577	T	C	0.00408	EMP2	-	TRUE	AluSp	SINE,Alu
chr3	52581295	G	A	1.21436E-06	PBRM1	-	FALSE
chr1	47184569	G	C	0.00509	EFCAB14	-	FALSE
chr1	16909220	T	C	0.00029	NBPF1	-	FALSE
chr3	14986137	T	C	1.37684E-08	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	26450101	A	G	0.00764	PDIK1L	+	FALSE
chr4	7762356	G	A	3.36293E-10	AFAP1,AFAP1-AS1	+,-	FALSE
chr15	90815787	A	G	0.00055		.	FALSE	FRAM	SINE,Alu
chr2	20648140	A	C	6.93182E-06	RHOB	+	FALSE
chr12	10311410	A	G	0.00909	OLR1	-	FALSE
chr1	38463504	C	T	0.00068	FHL3	-	FALSE
chr1	89518120	A	G	0.00453	GBP1	-	FALSE
chr7	128293103	A	C	0.00313	LINC01000	+	FALSE
chr1	28564195	T	C	0.00113	ATPIF1	+	FALSE
chr1	28825427	A	G	0.00484	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr2	202032107	A	G	0.00401	CFLAR	+	TRUE	AluJo	SINE,Alu
chr2	143638993	C	G	0.00016	KYNU	+	FALSE
chr1	114939633	G	A	0.00188	TRIM33	-	FALSE
chr3	12940374	T	G	0.00505	IQSEC1	-	FALSE
chr1	26755229	A	G	0.00318	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr1	162497739	G	C	0.00138	UHMK1	+	FALSE
chr1	53289686	A	G	0.00063	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	118502771	A	G	0.00466	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr8	143763618	C	G	0.00421	PSCA	+	FALSE
chr3	9934605	T	C	3.00360E-07	JAGN1	+	FALSE
chr10	64911911	A	G	0.00908	NRBF2	+	FALSE
chr11	94801637	T	C	0.00726	SRSF8	+	FALSE
chr1	10519064	T	C	0.00012		.	FALSE	AluSx3	SINE,Alu
chr2	86252198	T	C	0.00076	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	76227022	A	G	0.00035	ACADM	+	FALSE
chr1	26901090	C	T	0.00056	RPS6KA1	+	FALSE
chr1	28662254	A	G	0.00505	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	205112911	T	C	0.00161	DSTYK	-	FALSE
chr1	16927039	C	T	0.00040	NBPF1	-	FALSE
chr1	246829616	T	C	0.00029	CNST	+	FALSE
chr17	26955330	A	C	0.00291	KIAA0100	-	FALSE
chr1	114515717	G	A	0.00018	HIPK1	+	FALSE
chr1	95363042	C	G	0.00110	CNN3	-	FALSE
chr1	24172310	C	T	0.00502	FUCA1	-	FALSE
chr1	10042955	A	G	0.00131	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr2	86364709	G	T	0.00237	PTCD3	+	FALSE
chr1	16918717	C	T	0.00550	NBPF1	-	FALSE
chr2	170495929	T	A	0.00625		.	FALSE
chr1	78414334	C	A	0.00702	FUBP1	-	FALSE	A-rich	SINE,Alu
chr1	2113565	T	G	0.00429	PRKCZ	+	FALSE
chr11	65065251	A	G	0.00580	POLA2	+	TRUE	AluY	SINE,Alu
chr2	201253956	A	G	1.78964E-05	SPATS2L	+	FALSE
chr1	53289892	A	G	0.00070	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr5	184393	C	T	0.00228	PLEKHG4B	+	FALSE
chr12	64842974	C	A	0.00925		.	FALSE	AluSz	SINE,Alu
chr17	15434181	T	C	0.00011	TVP23C-CDRT4,TVP23C	-	TRUE	AluJb	SINE,Alu
chr3	39449137	T	C	0.00000	RPSA	+	FALSE
chr1	45975269	A	G	0.00827	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	179041705	A	T	0.00068	FAM20B	+	FALSE
chr2	76672504	A	G	2.97414E-06		.	FALSE	7SK	SINE,Alu
chr3	196079691	T	C	0.00507		.	FALSE	AluSc	SINE,Alu
chr1	53288894	A	G	0.00066	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	19585553	A	G	0.00039	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr14	75202705	A	G	0.00017	FCF1	+	TRUE	AluSc	SINE,Alu
chr2	37331614	T	C	0.00876		.	FALSE	AluJb	SINE,Alu
chr1	1459332	G	A	1.33172E-08	ATAD3A	+	FALSE
chr3	40578935	A	G	0.00063	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	10521237	T	C	0.00200	DFFA	-	TRUE	AluY	SINE,Alu
chr1	65692500	T	C	0.00281	AK4	+	FALSE	(T)n	SINE,Alu
chr1	158631171	A	C	0.00815	SPTA1	-	FALSE
chr4	17803545	T	C	0.00710	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	228334277	C	T	0.00256	GUK1	+	FALSE
chr9	100777784	T	A	0.00080	ANP32B	+	FALSE
chr2	130795675	C	T	0.00578	FAR2P1	-	FALSE
chr2	32534897	A	G	0.00111		.	FALSE	AluSx1	SINE,Alu
chr5	151041874	A	C	0.00060	SPARC	-	FALSE
chr13	99056476	A	T	0.00535	FARP1	+	FALSE
chr2	206983298	T	C	0.00811		.	FALSE	AluJb	SINE,Alu
chr1	10519951	T	C	0.00499		.	FALSE	AluJr	SINE,Alu
chr1	220231959	T	C	0.00028	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chrX	123045381	A	G	0.00893	XIAP	+	TRUE	AluJo	SINE,Alu
chr2	11781593	G	T	0.00551	GREB1	+	FALSE
chr1	33147934	A	G	0.00251	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr4	2940347	T	C	0.00113	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr3	88104158	T	A	0.00971	CGGBP1	-	FALSE
chr1	53288894	A	G	8.27269E-06	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr3	194789663	T	C	0.00754	XXYLT1	-	FALSE	MARNA	SINE,Alu
chr1	179070187	G	A	0.00556	ABL2	-	FALSE
chr1	17199259	G	A	0.00217	LOC440570	+	FALSE
chr1	28859264	T	G	0.00030	RCC1	+	FALSE
chr2	55255313	T	A	0.00675	RTN4	-	FALSE
chr1	9162362	T	C	0.00526		.	FALSE	AluSx	SINE,Alu
chr5	37291482	T	C	0.00146		.	FALSE	AluSx3	SINE,Alu
chr1	77759578	A	G	0.00031	AK5	+	FALSE
chr13	107196415	C	T	0.00285	ARGLU1	-	FALSE	(TTG)n	SINE,Alu
chr1	145283718	G	A	0.00989	NBPF20,NOTCH2NL	+	FALSE
chr12	69237534	A	G	0.00106	MDM2	+	TRUE
chr6	150046603	T	C	0.00730	NUP43	-	TRUE	AluSq2	SINE,Alu
chr1	16945504	C	T	0.00995	CROCCP2	-	FALSE
chr3	75779644	C	A	0.00177	ZNF717	-	FALSE
chr4	17804740	T	C	0.00015	DCAF16	-	TRUE	AluSx	SINE,Alu
chr22	18571474	A	G	1.16198E-07	PEX26	+	TRUE	AluSz	SINE,Alu
chr3	195962244	G	T	0.00083		.	FALSE
chr1	36068370	T	C	0.00789	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	65898269	C	T	0.00399	LEPR,LEPROT	+	FALSE	MIRc	SINE,Alu
chr2	86731290	T	C	0.00149	CHMP3,RNF103-CHMP3	-	FALSE	L1MC1	SINE,Alu
chr2	61369944	T	C	0.00024	LOC339803	-	TRUE	AluSx	SINE,Alu
chr6	150045919	T	C	0.00206	NUP43	-	TRUE	AluSq	SINE,Alu
chr1	55541174	A	G	0.00038	USP24	-	FALSE
chr20	57603730	A	T	0.00101		.	FALSE
chr1	212277616	C	T	0.00248	DTL	+	FALSE
chr3	195415529	C	T	0.00819	LINC00969,SDHAP2	+	FALSE	L1ME2	SINE,Alu
chr1	67874696	T	C	0.00014	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	16958064	A	G	0.00446		.	FALSE
chr1	220231959	T	C	2.75997E-05	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr2	198368110	C	A	0.00053	HSPE1,HSPE1-MOB4	+	FALSE
chr7	112579815	G	T	0.00997	BMT2	-	FALSE	(CGC)n	SINE,Alu
chr2	239970718	C	A	0.00244	HDAC4	-	FALSE	(AAAAC)n	SINE,Alu
chr5	154196577	C	T	0.00906	LARP1	+	FALSE
chr1	22161275	G	A	0.00600	HSPG2	-	FALSE
chr1	16952481	A	G	5.15865E-05	CROCCP2	-	FALSE
chr14	50053350	T	A	0.00071		.	FALSE	7SLRNA	SINE,Alu
chr17	57279258	A	G	0.00114	PRR11	+	TRUE	AluSq2	SINE,Alu
chr3	45960557	C	T	1.72644E-06	FYCO1	-	FALSE
chr6	31132911	C	T	0.00000		.	FALSE
chr7	6501832	A	C	0.00175	KDELR2	-	FALSE
chr6	42856056	A	G	0.00602	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	10517623	T	C	0.00348		.	FALSE	AluSx1	SINE,Alu
chr3	42599091	G	A	0.00196	SEC22C	-	FALSE
chr1	19984346	A	G	0.00071	MINOS1-NBL1,NBL1	+	FALSE
chr19	42376702	A	G	6.18708E-08		.	FALSE	AluSp	SINE,Alu
chr19	11560438	A	G	7.61449E-05	PRKCSH	+	FALSE	AluSx	SINE,Alu
chr1	204525667	A	G	3.94227E-05	MDM4	+	TRUE	AluSz	SINE,Alu
chr11	126147713	C	G	0.00384	FOXRED1	+	FALSE
chr10	75009585	T	C	2.45347E-10	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr15	102516561	T	C	0.00805	WASH3P	+	FALSE
chr8	144827207	A	T	0.00038	FAM83H-AS1	+	FALSE	ERVL-B4-int	SINE,Alu
chr1	15904318	C	T	9.04121E-06	AGMAT	-	FALSE
chr15	65442602	T	C	8.94083E-05	CLPX	-	TRUE	AluSg4	SINE,Alu
chr16	10625437	T	C	0.00028	EMP2	-	TRUE	AluSx	SINE,Alu
chr4	17802919	T	C	0.00857	DCAF16	-	TRUE	AluSz	SINE,Alu
chr5	154194456	G	C	0.00831	LARP1	+	FALSE
chr2	206987228	T	C	0.00052		.	FALSE	AluSx	SINE,Alu
chr2	7036682	A	T	0.00335	RSAD2	+	FALSE
chr1	118420452	C	G	0.00713	GDAP2	-	FALSE
chr20	25427865	A	G	0.00018	GINS1	+	FALSE	AluSz	SINE,Alu
chr1	6681836	G	A	5.48259E-05	PHF13	+	FALSE
chr1	204526554	A	G	0.00194	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	207247477	T	C	2.68116E-05	PFKFB2	+	FALSE	MER5B	SINE,Alu
chr1	109239335	G	T	0.00011	PRPF38B	+	FALSE
chr1	1650832	A	G	0.00065	CDK11B,CDK11A	-	FALSE
chr6	42856105	A	G	0.00972	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr11	94801640	A	C	0.00790	SRSF8	+	FALSE
chr11	45827050	G	C	0.00045	SLC35C1	+	FALSE
chr1	53291408	A	G	0.00021	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	71531596	A	G	1.07667E-05	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr1	33086812	T	C	0.00250		.	FALSE	AluY	SINE,Alu
chr1	85785548	C	T	0.00350	DDAH1	-	FALSE
chr1	1595034	T	C	2.36116E-07	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr17	8378932	A	G	0.00372	MYH10	-	FALSE
chr1	46164678	T	C	0.00773	IPP	-	TRUE	AluJb	SINE,Alu
chr9	89627063	A	G	0.00614	LOC440173	-	FALSE
chr1	28825331	A	G	1.84239E-05	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr2	106510202	C	T	0.00854	NCK2	+	FALSE
chr14	75202373	A	G	0.00019	FCF1	+	FALSE	AluSc	SINE,Alu
chr3	42643425	G	A	0.00482	NKTR	+	FALSE	L2a	SINE,Alu
chr10	116603648	A	G	0.00267	FAM160B1	+	FALSE
chr3	10192608	A	G	0.00245	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	114940227	T	C	0.00852	TRIM33	-	FALSE	(T)n	SINE,Alu
chr2	61386572	C	G	0.00821	C2orf74	+	FALSE	AluSz	SINE,Alu
chr3	156258308	T	C	0.00323	SSR3	-	TRUE	AluYk3	SINE,Alu
chr2	37327670	T	C	5.08697E-08		.	FALSE
chr1	10042988	A	G	4.26240E-05	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr3	160219095	G	A	0.00620	KPNA4	-	FALSE	A-rich	SINE,Alu
chr1	234561498	T	C	0.00092	TARBP1	-	FALSE
chr19	41097276	C	G	0.00188	SHKBP1	+	FALSE
chr9	125866693	C	T	0.00255	RABGAP1	+	FALSE
chr6	13790822	T	C	0.00885	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr12	56510559	A	G	0.00137	RPL41	+	FALSE
chrX	77083614	T	C	6.82446E-05	MAGT1	-	TRUE	AluSz6	SINE,Alu

RBP	ATXN2
Knock-Method	shRNA
RBP Family	SM-ATX
Biosample Name	MEG-01
Tissue Type	Blood
Biosample Type	Cell line
# of Control	3
# of Treat	3
Species	Human
Data Source	GEO
Profile ID	GSE131308
Platform	GPL16791
Pubmed ID	-

ATXN2 - Target Gene Network