RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	16890598	T	A	0.00375	NBPF1	-	FALSE
chr3	9829171	G	A	0.00730	TADA3	-	FALSE
chr1	235715523	A	G	0.00660	GNG4	-	FALSE
chr2	64863970	C	T	9.52027E-09	SERTAD2	-	FALSE
chr1	52375677	T	C	0.00542	RAB3B	-	FALSE	MIRb	SINE,Alu
chr1	46077218	A	G	0.00543	NASP	+	TRUE	AluSc8	SINE,Alu
chr17	45195951	T	C	0.00011	CDC27	-	TRUE	MADE1	SINE,Alu
chr15	83685469	T	C	0.00976	BTBD1	-	FALSE
chr19	53914395	A	G	0.00227	ZNF765	+	TRUE	AluSx	SINE,Alu
chr19	7084638	A	G	0.00024	ZNF557	+	TRUE	AluJb	SINE,Alu
chr1	120839683	G	A	0.00875	FAM72B	+	FALSE
chr11	32625925	A	G	0.00845	CCDC73	-	FALSE	AluJb	SINE,Alu
chr2	37478348	T	A	0.00392	PRKD3	-	FALSE
chr2	128064448	G	T	0.00637	MAP3K2	-	FALSE	(GT)n	SINE,Alu
chr1	54692341	T	C	0.00045	SSBP3	-	FALSE	(T)n	SINE,Alu
chr1	77759578	A	G	4.05543E-05	AK5	+	FALSE
chr1	9328106	A	G	0.00394	H6PD	+	TRUE	AluJr	SINE,Alu
chr2	191366707	A	G	0.00900	MFSD6	+	FALSE
chr7	17384354	A	G	0.00908	AHR	+	TRUE	AluSx	SINE,Alu
chr2	109301115	T	A	0.00150	LIMS1	+	FALSE
chr6	74133968	T	C	0.00431		.	FALSE	AluY	SINE,Alu
chr1	63881552	C	T	0.00021	ALG6	+	FALSE
chr2	179371305	A	G	0.00696	MIR548N	+	FALSE
chr19	19745479	C	T	0.00175	GMIP	-	FALSE
chr1	9162423	T	C	0.00074		.	FALSE	AluSx	SINE,Alu
chr1	64095111	A	G	0.00201	PGM1	+	FALSE
chr6	158613395	C	A	0.00031	GTF2H5	+	FALSE
chr16	19715543	T	C	0.00879		.	FALSE	AluSg	SINE,Alu
chr1	145281543	C	T	0.00028	NBPF20,NOTCH2NL	+	FALSE
chr1	46164493	T	C	0.00977	IPP	-	TRUE	AluJb	SINE,Alu
chr1	19586532	A	G	7.13982E-05	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	10520715	T	C	0.00119	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	36752811	C	T	0.00000	THRAP3	+	FALSE
chr2	86252198	T	C	0.00076	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr3	105294534	A	G	1.10929E-06	ALCAM	+	FALSE
chr8	26492397	C	T	0.00709	DPYSL2	+	FALSE
chr7	96318078	A	T	0.00790		.	FALSE
chr3	37366459	C	A	2.94197E-05	GOLGA4	+	FALSE
chrX	9686187	T	C	0.00420	TBL1X	+	FALSE
chr5	180665123	G	A	0.00259	RACK1	-	FALSE
chr16	29454768	A	G	0.00564	SMG1P6,BOLA2-SMG1P6	-	FALSE
chr4	39551008	T	C	0.00017	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr2	64119875	G	A	0.00781	VPS54	-	FALSE
chr11	86658271	A	C	0.00896	PRSS23,FZD4	+,-	FALSE	AluSx3	SINE,Alu
chr3	15296357	A	T	3.39714E-05	SH3BP5,SH3BP5-AS1	+,-	FALSE
chr1	6585331	T	C	0.00094	NOL9	-	TRUE	FAM	SINE,Alu
chr7	116340269	C	T	0.00313	MET	+	FALSE
chr2	113494520	T	C	0.00267	CKAP2L	-	FALSE	AluSx1	SINE,Alu
chr19	13884096	A	G	0.00049	MRI1	+	TRUE	AluSz	SINE,Alu
chr1	21810693	A	G	0.00370	NBPF3	+	FALSE	L1MC4	SINE,Alu
chr1	162354204	C	A	0.00193	C1orf226	+	FALSE
chr1	1252443	T	C	8.33820E-06	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr2	37331565	T	C	0.00121		.	FALSE	AluJb	SINE,Alu
chr3	14986111	T	C	0.00224	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr14	74526154	T	C	0.00030	BBOF1,ALDH6A1	+,-	FALSE	AluSp	SINE,Alu
chr1	10519888	T	C	0.00878		.	FALSE	AluJr	SINE,Alu
chr2	172412829	T	A	0.00477	CYBRD1	+	FALSE
chr14	67852067	A	G	2.77652E-05	EIF2S1	+	TRUE	AluJb	SINE,Alu
chr6	143382538	A	T	0.00145	AIG1	+	FALSE
chr9	17835	A	G	0.00012	WASH1	-	FALSE
chr7	5568366	A	G	0.00400	ACTB	-	FALSE
chr1	51434560	G	A	6.87938E-05	CDKN2C	+	FALSE
chr2	207146631	C	A	9.52905E-05	ZDBF2	+	FALSE
chr3	195694448	C	T	0.00025	SDHAP1	-	FALSE
chr1	53291408	A	G	0.00021	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr2	85773494	T	C	0.00099	GGCX	-	TRUE	AluY	SINE,Alu
chr3	48787094	T	C	0.00518	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr2	204301757	C	T	0.00999	RAPH1	-	FALSE
chr1	155582104	T	A	0.00099	MSTO1	+	FALSE
chr2	11323078	C	T	0.00539	ROCK2	-	FALSE
chr14	90871942	C	A	0.00057	CALM1	+	FALSE
chr19	36260451	A	G	0.00854		.	FALSE	AluY	SINE,Alu
chr1	146033815	G	A	0.00307	NBPF20,NBPF10,NBPF25P,NBPF11	+,-	FALSE
chr1	200521412	G	A	0.00588	KIF14	-	FALSE
chr1	114519351	T	G	0.00773	HIPK1	+	FALSE
chr1	45244411	C	A	0.00234	RPS8	+	FALSE
chr3	12877522	A	T	0.00956	RPL32	-	FALSE
chr3	81539382	C	T	1.63276E-05	GBE1	-	FALSE
chr6	114181220	A	G	0.00265	MARCKS	+	FALSE
chr16	75479377	T	C	0.00639	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr5	64016339	C	T	6.96791E-06	SREK1IP1	-	FALSE
chr1	158067060	T	A	0.00778	KIRREL	+	FALSE
chr1	55207986	T	A	0.00872	MROH7-TTC4,TTC4	+	FALSE
chr1	109818160	T	G	3.82986E-06	CELSR2	+	FALSE
chr3	195243023	A	C	0.00729	PPP1R2	-	FALSE
chr3	14526656	A	G	0.00189	SLC6A6	+	FALSE
chr1	36067925	T	C	1.81623E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	100440553	A	G	0.00553	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr1	36067760	T	C	0.00768	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	46660295	T	C	0.00871	POMGNT1	-	FALSE
chr3	98518155	A	T	0.00777	DCBLD2	-	FALSE
chr8	38829416	A	G	0.00695	PLEKHA2	+	TRUE	AluYc	SINE,Alu
chr1	19447843	C	G	0.00345	UBR4	-	FALSE
chr4	57326291	A	G	0.00017	PAICS	+	TRUE	AluJr	SINE,Alu
chr20	25428724	A	G	0.00033	GINS1	+	TRUE	AluJb	SINE,Alu
chr2	206986926	T	C	0.00913		.	FALSE	AluJr	SINE,Alu
chr1	186321189	A	G	0.00010	TPR	-	FALSE
chr1	145689717	A	G	7.73781E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr1	110201699	T	C	0.00513	GSTM4	+	FALSE
chr1	24172310	C	T	0.00502	FUCA1	-	FALSE
chr1	142688506	T	C	0.00337		.	FALSE
chr5	150827307	G	T	0.00708	SLC36A1	+	FALSE
chr5	96129512	A	G	0.00997	ERAP1	-	FALSE
chr3	195963398	A	G	0.00271		.	FALSE
chr21	34728215	A	G	0.00153	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr2	232319529	T	A	1.32288E-06	NCL	-	FALSE
chr12	98943192	A	G	0.00011	TMPO	+	FALSE	AluSz	SINE,Alu
chr4	165998019	T	C	0.00849	TMEM192	-	TRUE	AluSx	SINE,Alu
chr1	28836975	A	G	0.00782	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr11	19184951	G	A	0.00066	ZDHHC13	+	FALSE
chr3	52288945	T	C	3.51556E-07	WDR82	-	FALSE
chr1	6583701	T	C	0.00029	NOL9	-	FALSE
chr2	217366868	A	G	0.00100		.	FALSE	AluSz6	SINE,Alu
chr1	6159719	C	T	4.79205E-09	KCNAB2	+	FALSE
chr19	58375707	A	G	0.00156	ZNF587	+	TRUE	AluSg	SINE,Alu
chr1	16946266	G	C	0.00750	CROCCP2	-	FALSE	MIRb	SINE,Alu
chr15	60678712	G	A	0.00801	ANXA2	-	FALSE
chr1	44423703	C	T	1.21014E-14	IPO13	+	FALSE
chr2	86250013	T	C	0.00867	LOC90784	-	TRUE	AluSx	SINE,Alu
chr1	179830012	A	C	0.00303	TOR1AIP2	-	FALSE
chr1	31405694	G	A	0.00986	PUM1	-	FALSE
chr14	50361197	G	T	1.76251E-06	ARF6	+	FALSE
chr2	37075013	T	A	0.00119	STRN	-	FALSE
chr1	1662754	T	C	0.00107	SLC35E2	-	TRUE	AluY	SINE,Alu
chr1	19578576	G	A	0.00347	MRTO4	+	FALSE
chr1	118502757	G	A	0.00793	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr2	46414708	G	A	0.00155	PRKCE	+	FALSE
chr1	118167515	C	T	0.00852	FAM46C	+	FALSE
chr17	45761108	G	T	0.00127		.	FALSE
chr1	67874689	T	C	7.42611E-10	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	26144435	C	G	4.88757E-05	SEPN1	+	FALSE
chr1	1654038	G	A	0.00290	CDK11B,CDK11A	-	FALSE
chr1	9331255	A	G	0.00992	H6PD	+	TRUE	AluSx	SINE,Alu
chr6	13788215	T	C	0.00546	MCUR1	-	TRUE	AluSx	SINE,Alu
chr6	90346418	A	T	1.30335E-05	LYRM2	-	FALSE	AluSz	SINE,Alu
chr1	67874859	T	C	0.00209	SERBP1	-	TRUE	AluSx	SINE,Alu
chr2	98089475	T	A	0.00385	LOC100506076,LOC100506123	-	FALSE
chr1	52381348	T	G	0.00500	RAB3B	-	FALSE
chrX	152916235	G	A	0.00015	DUSP9	+	FALSE
chr1	1595586	T	C	0.00096	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr12	27953267	T	G	0.00233	KLHL42	+	FALSE
chr1	32641383	C	A	0.00112	KPNA6	+	FALSE	AluSx3	SINE,Alu
chr2	9630231	C	T	0.00895	ADAM17	-	FALSE
chr5	56177845	A	T	0.00420	MAP3K1	+	FALSE
chr5	40832552	G	T	1.14652E-07	RPL37	-	FALSE
chr1	6583066	T	C	0.00088	NOL9	-	TRUE	AluSx4	SINE,Alu
chr3	133307642	T	G	0.00523	CDV3	+	FALSE	(TT)n	SINE,Alu
chr16	11931210	G	T	0.00292	RSL1D1	-	FALSE
chr1	145688973	A	G	0.00017	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr3	44790879	T	C	0.00453	KIAA1143	-	TRUE	AluY	SINE,Alu
chr3	186502665	C	T	0.00637	EIF4A2	+	FALSE
chr1	65900357	G	T	0.00041	LEPR,LEPROT	+	FALSE
chr5	7885959	A	G	0.00628	MTRR	+	FALSE
chr1	144930596	C	A	0.00578	NBPF20,PDE4DIP	+,-	FALSE
chr3	42591956	G	A	0.00030	SEC22C	-	FALSE
chr2	102484487	G	T	0.00281	MAP4K4	+	FALSE
chr1	21810587	A	G	0.00563	NBPF3	+	FALSE
chr17	28513176	G	A	0.00996	NSRP1	+	FALSE	AluJr	SINE,Alu
chr5	70503889	C	A	0.00131		.	FALSE
chr22	18571343	A	G	0.00501	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	36529575	A	G	2.40551E-05		.	FALSE	AluJr	SINE,Alu
chr1	55062960	G	A	0.00542	ACOT11	+	FALSE
chr1	241795525	A	G	0.00165	OPN3,CHML	-	FALSE	THE1B	SINE,Alu
chr19	59095449	A	G	6.25071E-06	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr4	120979178	T	C	0.00433		.	FALSE	AluSg4	SINE,Alu
chr4	57326875	A	G	1.03861E-05	PAICS	+	TRUE	AluSx1	SINE,Alu
chr5	151041869	T	A	0.00305	SPARC	-	FALSE
chr5	40828060	T	C	0.00253	LOC100506548	-	FALSE
chr1	225611661	C	T	0.00113	LBR	-	FALSE
chr2	191065246	T	A	0.00594	C2orf88	+	FALSE
chr5	149363214	A	G	0.00040	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr11	68523504	T	C	0.00029	CPT1A	-	TRUE	AluSq	SINE,Alu
chr2	158636910	G	A	0.00160	ACVR1	-	FALSE
chr1	19543349	T	C	0.00060	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr6	160100931	T	C	0.00215	SOD2	-	TRUE	AluSz	SINE,Alu
chr12	56510697	G	A	0.00989	RPL41	+	FALSE
chr1	10517659	T	C	0.00010		.	FALSE	AluSx1	SINE,Alu
chr15	52840681	C	T	0.00789	ARPP19	-	FALSE	AluSx1	SINE,Alu
chr1	68940885	G	A	0.00500	DEPDC1	-	FALSE	MIR	SINE,Alu
chr1	25570549	C	A	0.00387	RSRP1	-	FALSE
chr1	28661656	A	G	0.00106	MED18	+	TRUE	AluSg	SINE,Alu
chr10	120801786	G	C	0.00752	EIF3A	-	FALSE
chr1	24286327	G	A	0.00053	PNRC2	+	FALSE
chr6	99848757	C	T	0.00951	PNISR	-	FALSE	(TCTTTT)n	SINE,Alu
chr17	43364288	A	G	0.00345	MAP3K14	-	FALSE
chr1	36794266	A	G	0.00141		.	FALSE	AluJb	SINE,Alu
chr12	69159400	G	A	0.00173	SLC35E3	+	FALSE	(AT)n	SINE,Alu
chr1	16893691	C	A	0.00371	NBPF1	-	FALSE
chr1	62673225	G	A	0.00039	L1TD1	+	FALSE	L1MEd	SINE,Alu
chr17	79780692	T	C	0.00116	MCRIP1	-	TRUE
chr1	67874540	T	C	0.00555	SERBP1	-	FALSE
chr3	172115590	A	G	0.00355	FNDC3B	+	FALSE
chr4	120981118	T	A	0.00024	MAD2L1	-	FALSE
chr9	133778117	C	T	0.00739	FIBCD1	-	FALSE
chr1	16133978	T	C	0.00625	UQCRHL	-	FALSE
chr1	32661578	C	T	0.00623	TXLNA	+	FALSE	(T)n	SINE,Alu
chr15	65442483	T	C	0.00523	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	237064432	C	G	0.00019	MTR	+	FALSE
chr1	21766776	G	C	0.00343	NBPF3	+	FALSE
chr2	103332887	T	A	0.00515	MFSD9	-	FALSE	L2d2	SINE,Alu
chr3	42610374	A	G	0.00594	SEC22C	-	FALSE
chr1	11982544	T	C	4.37710E-05	KIAA2013	-	FALSE
chr2	101010082	G	C	0.00965	CHST10	-	FALSE
chr5	40826639	A	G	0.00978	LOC100506548	-	FALSE	LTR78	SINE,Alu
chr1	212114663	G	A	0.00858	INTS7	-	FALSE
chr3	101405563	A	G	0.00511	RPL24	-	FALSE
chr2	46852033	A	G	0.00543	CRIPT	+	FALSE
chr3	172224303	A	G	0.00524	TNFSF10	-	FALSE
chr5	76728039	T	G	0.00092	WDR41	-	FALSE
chr1	35644503	T	A	0.00551	SFPQ	-	FALSE
chr1	10517659	T	C	0.00679		.	FALSE	AluSx1	SINE,Alu
chr1	112266787	G	T	0.00642	FAM212B	-	FALSE
chr19	7084638	A	G	0.00508	ZNF557	+	TRUE	AluJb	SINE,Alu
chr1	36068275	T	C	0.00048	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	28607959	C	A	0.00230	SESN2	+	FALSE
chr9	70483778	A	T	0.00026	CBWD5	-	FALSE
chr1	206579798	T	C	0.00883	SRGAP2	+	FALSE
chr1	86118417	T	G	0.00653	ZNHIT6	-	FALSE
chr16	10625058	T	C	2.66942E-12	EMP2	-	TRUE	AluSx3	SINE,Alu
chr2	32533218	A	G	0.00106		.	FALSE	AluY	SINE,Alu
chr12	7074517	C	T	0.00369	PHB2	-	FALSE
chr2	30381505	T	C	0.00820	YPEL5	+	FALSE
chr1	146649940	C	T	1.24118E-05	PDIA3P1	+	FALSE
chr1	38002068	C	T	0.00962	SNIP1	-	FALSE
chr1	11979809	A	C	0.00525	KIAA2013	-	FALSE
chr3	122283292	C	G	0.00047	DTX3L,PARP9	+,-	FALSE
chr5	135392426	T	C	8.62804E-07	TGFBI	+	FALSE
chr1	145513031	A	G	0.00713	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr20	29631557	A	G	0.00159	FRG1BP	+	FALSE
chr8	30643549	G	C	0.00257	PPP2CB	-	FALSE
chr5	125961463	A	G	0.00323	PHAX	+	TRUE	AluSz6	SINE,Alu
chr19	16661421	T	C	0.00427	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr4	4291825	C	T	1.35815E-09	LYAR	-	FALSE
chr9	115447532	T	C	9.24886E-06	INIP	-	TRUE	AluJb	SINE,Alu
chr4	6644459	C	A	0.00109	MRFAP1	+	FALSE
chr2	224621887	T	C	0.00373	AP1S3	-	FALSE	AluSc	SINE,Alu
chr2	202031806	A	T	0.00543	CFLAR	+	FALSE
chr3	101369192	C	T	0.00761	ZBTB11	-	FALSE
chr1	160967857	T	C	0.00032	F11R	-	TRUE	AluSp	SINE,Alu
chr2	36706788	C	G	0.00481	CRIM1	+	FALSE
chr1	27107950	G	A	0.00249	ARID1A	+	FALSE
chr1	45975269	A	G	0.00827	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	16929327	C	T	0.00315	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr4	57326329	A	G	0.00077	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	153520954	C	T	0.00910	LOC101928034,S100A3	+,-	FALSE
chr1	8938276	T	A	0.00178	ENO1	-	FALSE
chr1	33148118	A	G	0.00374	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	111489903	A	C	0.00666	LRIF1	-	FALSE
chr6	34252328	T	A	0.00062		.	FALSE	(T)n	SINE,Alu
chr5	149829071	T	C	0.00407	RPS14	-	FALSE
chr1	144618144	A	G	0.00725	NBPF20,NBPF9	+	FALSE
chr1	10520331	C	T	0.00043		.	FALSE	AluSx1	SINE,Alu
chr1	25893927	A	G	0.00081	LDLRAP1	+	FALSE
chr4	170643973	C	T	0.00232	CLCN3	+	FALSE
chr1	16893691	C	A	0.00141	NBPF1	-	FALSE
chrX	106184603	A	T	0.00717	MORC4	-	FALSE	(GA)n	SINE,Alu
chr2	37429626	A	G	0.00028	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr12	125627187	C	T	0.00055	AACS	+	FALSE
chr22	18571431	A	G	0.00158	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	28835847	A	G	0.00042	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	87573963	T	C	0.00978	HS2ST1	+	FALSE
chr1	143399333	T	A	0.00339		.	FALSE	L1MC4	SINE,Alu
chr10	51026705	C	G	0.00456	PARG	-	FALSE
chr1	180897569	C	T	0.00960	KIAA1614	+	FALSE
chr4	126849	A	G	0.00018	ZNF718	+	TRUE	AluSc	SINE,Alu
chr2	37328013	T	C	0.00010		.	FALSE
chr19	54627915	C	T	0.00015	PRPF31	+	FALSE
chr1	145441843	G	A	0.00744	NBPF20,NBPF10,TXNIP	+	FALSE
chr1	95712458	C	A	0.00135	RWDD3	+	FALSE
chr1	6614230	G	A	0.00509	NOL9	-	FALSE
chr15	65442546	T	C	0.00564	CLPX	-	TRUE	AluSg4	SINE,Alu
chr2	37330612	T	C	0.00030		.	FALSE	AluSq2	SINE,Alu
chr1	145511988	A	G	0.00965	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	154554940	G	C	0.00032	ADAR	-	FALSE
chr7	44841589	A	G	0.00469	PPIA	+	TRUE	AluJr	SINE,Alu
chr3	195415529	C	T	0.00819	LINC00969,SDHAP2	+	FALSE	L1ME2	SINE,Alu
chr2	128644574	A	G	0.00163		.	FALSE
chr16	81064533	A	G	0.00686	CENPN	+	TRUE	AluSg	SINE,Alu
chr7	6064009	C	G	0.00273	EIF2AK1	-	FALSE
chr12	64842925	A	G	0.00345		.	FALSE	AluSz	SINE,Alu
chr3	45722396	A	G	0.00231	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	27182751	C	A	0.00122		.	FALSE
chr17	38438362	G	A	0.00016	WIPF2	+	FALSE	A-rich	SINE,Alu
chr5	43527402	T	C	0.00539	PAIP1	-	FALSE
chr1	16889423	G	C	0.00459	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr17	56081432	G	A	4.92367E-05	SRSF1	-	FALSE
chr1	54382632	T	C	0.00219		.	FALSE	AluSq2	SINE,Alu
chr1	46076543	A	G	0.00420	NASP	+	TRUE	AluSx	SINE,Alu
chr1	28661665	A	G	0.00808	MED18	+	TRUE	AluSg	SINE,Alu
chr1	179843781	T	C	0.00888	TOR1AIP2	-	TRUE	AluJb	SINE,Alu
chr1	19586532	A	G	0.00166	MRTO4	+	TRUE	AluSz	SINE,Alu
chr4	39552183	T	C	0.00479	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr16	56510329	T	G	0.00247	OGFOD1	+	FALSE
chr3	39452772	A	G	0.00127	RPSA	+	FALSE
chr1	114227223	G	A	0.00699	MAGI3	+	FALSE
chr1	54691922	T	A	0.00415	SSBP3	-	FALSE
chr3	195460892	A	G	0.00057		.	FALSE	AluSg	SINE,Alu
chr1	16945227	G	T	0.00353	CROCCP2	-	FALSE
chr1	145209366	A	G	0.00499	NBPF20,NOTCH2NL	+	FALSE
chr1	155217438	A	T	0.00610	FAM189B	-	FALSE
chr1	19244904	G	A	0.00487	IFFO2	-	FALSE
chr3	115528809	T	G	0.00087	LSAMP	-	FALSE
chr19	59093998	A	G	2.36787E-07	CENPBD1P1	+	TRUE	AluY	SINE,Alu
chr5	180001389	G	A	0.00138	CNOT6	+	FALSE
chr1	1593857	T	C	0.00217	CDK11B,SLC35E2B	-	FALSE
chr1	42881767	G	C	0.00437	RIMKLA	+	FALSE
chr1	109239943	C	T	0.00722	PRPF38B	+	FALSE
chr4	6718775	G	T	3.33433E-09	BLOC1S4	+	FALSE
chr17	57279281	A	G	0.00918	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	9160900	T	C	0.00010		.	FALSE	AluJb	SINE,Alu
chr1	70718272	A	T	0.00166		.	FALSE
chr5	149829068	C	T	0.00038	RPS14	-	FALSE
chr2	206987731	T	C	0.00731		.	FALSE	AluJb	SINE,Alu
chr11	75116737	G	A	0.00774	RPS3	+	FALSE
chr1	9328120	A	G	0.00024	H6PD	+	TRUE	AluJr	SINE,Alu
chr12	125269475	T	C	0.00184	SCARB1	-	FALSE
chr1	6583593	T	C	0.00088	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	116609833	G	A	0.00012	SLC22A15	+	FALSE
chr12	56215099	T	A	0.00227	DNAJC14	-	FALSE
chr3	193334991	G	A	0.00473	OPA1	+	FALSE
chr1	16891379	C	T	0.00074	NBPF1	-	FALSE
chr5	43700242	A	G	0.00932	NNT	+	FALSE
chr1	26143726	G	T	0.00560	SEPN1	+	FALSE	AluSx	SINE,Alu
chr15	71124666	C	A	4.50846E-10	LARP6	-	FALSE
chrX	3523061	C	G	0.00023	PRKX	-	FALSE	(AC)n	SINE,Alu
chr3	33038222	A	T	0.00379	GLB1	-	FALSE
chr1	36535560	A	G	0.00059		.	FALSE	AluSx1	SINE,Alu
chr16	81064611	A	G	0.00075	CENPN	+	TRUE	AluSg	SINE,Alu
chr4	2940413	T	C	0.00311	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr2	109401259	C	T	0.00889	RANBP2	+	FALSE
chr19	19793795	A	G	0.00030	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr6	138734422	C	T	0.00447	HEBP2	+	FALSE
chr2	202029997	A	G	0.00335	CFLAR	+	FALSE	(TTA)n	SINE,Alu
chr6	42048128	G	T	0.00604	TAF8	+	FALSE	AluSq2	SINE,Alu
chr6	42856170	A	G	0.00141	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr4	13602231	G	A	0.00646	BOD1L1	-	FALSE
chr1	145513112	A	G	0.00098	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr2	61277835	A	G	0.00105	PEX13	+	TRUE	AluY	SINE,Alu
chr6	24720534	T	C	0.00053		.	FALSE
chr3	195243012	A	C	0.00054	PPP1R2	-	FALSE
chr19	44418680	G	C	0.00066	ZNF45	-	FALSE
chr1	44818528	T	G	0.00486	ERI3	-	FALSE
chr2	152314385	G	A	0.00040	RIF1	+	FALSE
chr17	74710572	T	C	0.00594	JMJD6	-	FALSE
chr8	30536146	T	C	1.15312E-06	GSR	-	TRUE	AluJr	SINE,Alu
chr3	49142142	G	T	6.70614E-05	QARS	-	FALSE
chr2	37328087	T	C	0.00313		.	FALSE
chrX	54587249	A	G	0.00769	GNL3L	+	TRUE	AluSq2	SINE,Alu

RBP	VIRMA
Knock-Method	shRNA
RBP Family	Non-canonical_RBP
Biosample Name	HCCLM3
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE134776
Platform	GPL20301
Pubmed ID	31856849

VIRMA - Target Gene Network