RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	220871123	A	G	0.00854	C1orf115	+	FALSE
chr6	160113872	A	G	0.00863	SOD2	-	FALSE
chr11	65404866	T	G	0.00664	PCNX3	+	FALSE	(T)n	SINE,Alu
chr5	64964627	T	C	2.01273E-05	SGTB	-	TRUE	AluSx1	SINE,Alu
chr17	56049829	T	C	5.66836E-08	VEZF1	-	TRUE
chr3	12940374	T	G	0.00505	IQSEC1	-	FALSE
chr1	144821986	C	T	0.00218	NBPF20,NBPF9	+	FALSE
chr1	150597527	T	C	0.00058	ENSA	-	FALSE
chr12	6840209	G	A	0.00820	COPS7A	+	FALSE
chr2	74348998	A	G	0.00279		.	FALSE	AluSz	SINE,Alu
chr2	38971644	T	G	0.00239	SRSF7	-	FALSE
chr17	66264542	A	T	0.00110	ARSG,SLC16A6	+,-	FALSE
chr1	20980225	G	T	0.00055	DDOST	-	FALSE
chr3	45721874	A	G	0.00314	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr5	133738270	T	C	5.55380E-10	CDKN2AIPNL	-	TRUE	FRAM	SINE,Alu
chr2	128950515	A	G	0.00208	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	2335348	C	T	0.00018	RER1	+	FALSE
chr1	155161702	G	C	0.00020	MUC1	-	FALSE
chr1	6283264	T	C	5.77123E-05	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	144852203	T	G	0.00029	NBPF20,PDE4DIP	+,-	FALSE
chr2	37330606	T	C	0.00136		.	FALSE	AluSq2	SINE,Alu
chr3	24019987	A	C	0.00563	NR1D2	+	FALSE
chr1	65900357	G	T	0.00041	LEPR,LEPROT	+	FALSE
chr1	10042987	A	G	0.00149	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	207250570	A	G	0.00486	PFKFB2	+	FALSE
chr4	68483804	A	T	0.00720	UBA6	-	FALSE
chr2	127826533	A	G	0.00942	BIN1	-	FALSE
chr1	35319580	T	A	0.00988	SMIM12	-	FALSE	AluSg	SINE,Alu
chr1	67874689	T	C	0.00896	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr5	149013587	G	A	0.00102	ARHGEF37	+	FALSE	L2d	SINE,Alu
chr2	37331560	T	C	0.00040		.	FALSE	AluJb	SINE,Alu
chr1	93826611	C	G	0.00072	DR1	+	FALSE
chr11	119533724	C	G	0.00232	NECTIN1	-	FALSE
chr19	12742290	A	G	0.00564		.	FALSE	AluSx	SINE,Alu
chrX	37699364	C	G	0.00695	DYNLT3	-	FALSE
chr2	201253956	A	G	0.00071	SPATS2L	+	FALSE
chr16	10623531	T	C	1.32618E-09	EMP2	-	TRUE	AluSp	SINE,Alu
chr2	72405098	C	A	0.00646	EXOC6B	-	FALSE
chr2	91955209	G	A	6.38312E-06		.	FALSE
chr2	5837878	G	A	7.66453E-07	SOX11	+	FALSE
chr1	156206121	G	A	0.00423	PMF1-BGLAP,PMF1	+	FALSE
chr1	28785597	G	C	0.00595	PHACTR4	+	FALSE
chr17	73773311	T	G	0.00474	H3F3B	-	FALSE
chr1	33087433	C	T	0.00687	ZBTB8OS	-	FALSE
chr7	123390143	G	A	0.00910		.	FALSE
chr7	100860467	C	G	0.00267	PLOD3	-	FALSE
chr4	17802920	T	C	0.00805	DCAF16	-	TRUE	AluSz	SINE,Alu
chr4	154257510	A	C	0.00121	TRIM2	+	FALSE	(A)n	SINE,Alu
chr1	145513098	A	G	0.00067	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chrX	24095065	G	T	0.00291	EIF2S3	+	FALSE
chr1	227845283	C	A	0.00809	ZNF678	+	FALSE
chr3	49460407	C	T	0.00080	NICN1	-	FALSE	L2c	SINE,Alu
chr14	69254646	T	C	0.00181	ZFP36L1	-	FALSE
chr1	179326882	A	G	1.03454E-05	SOAT1	+	TRUE	AluJo	SINE,Alu
chr12	42719890	A	G	0.00730	ZCRB1	-	FALSE
chr3	53265766	C	T	0.00088	TKT	-	FALSE
chr1	33149363	A	G	0.00237	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr14	74526976	T	C	1.13179E-06	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr3	47386061	A	C	8.10198E-06	KLHL18	+	FALSE
chr13	50102992	T	C	0.00956	SETDB2-PHF11,PHF11	+	FALSE	L2a	SINE,Alu
chr19	42375624	A	G	0.00339		.	FALSE	AluSx	SINE,Alu
chr1	17735266	G	A	0.00471	RCC2	-	FALSE
chr1	26608017	T	A	3.67009E-06		.	FALSE
chr1	10042987	A	G	0.00261	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr3	88104159	A	C	0.00279	CGGBP1	-	FALSE
chr1	9163442	T	C	0.00235		.	FALSE	AluSp	SINE,Alu
chr1	87328396	A	T	0.00148	SEP15	-	FALSE
chr1	144931727	G	A	0.00037	NBPF20,PDE4DIP	+,-	FALSE
chr19	39669600	A	G	0.00619	PAK4	+	FALSE	(TG)n	SINE,Alu
chr1	184762676	T	C	0.00548	FAM129A	-	TRUE	AluSz	SINE,Alu
chr2	240954005	C	A	0.00021	NDUFA10	-	FALSE
chr5	40828060	T	C	0.00253	LOC100506548	-	FALSE
chr1	10520153	T	C	0.00907		.	FALSE	AluSx	SINE,Alu
chr3	12628920	G	C	3.08728E-06	RAF1	-	FALSE
chr4	39528976	C	T	8.52335E-05	UGDH	-	FALSE
chr15	65442483	T	C	0.00523	CLPX	-	TRUE	AluSg4	SINE,Alu
chr2	37331038	T	C	4.65669E-05		.	FALSE	AluSx1	SINE,Alu
chr5	140594470	G	A	0.00041	PCDHB13	+	FALSE
chr1	149581854	C	A	0.00175	LINC00623,LINC00869,LOC103091866	+	FALSE	L2b	SINE,Alu
chr20	35520229	T	C	3.77169E-05	TLDC2,SAMHD1	+,-	FALSE	AluSx3	SINE,Alu
chr19	9761591	T	C	0.00516	ZNF562	-	TRUE	AluSp	SINE,Alu
chr6	42856158	A	G	0.00118	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr3	101579158	A	G	0.00022	NFKBIZ	+	FALSE	AluJo	SINE,Alu
chr3	10192596	A	G	9.40892E-06	VHL	+	TRUE	AluSx1	SINE,Alu
chr3	181430334	G	A	0.00305	SOX2-OT,SOX2	+	FALSE
chr21	34728068	A	G	0.00188	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr12	69237042	A	G	0.00413	MDM2	+	TRUE
chr1	9161668	T	C	0.00456		.	FALSE
chr1	145284138	G	A	0.00382	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr2	238244963	A	G	0.00124	COL6A3	-	FALSE
chr1	16944809	G	C	0.00072	CROCCP2	-	FALSE
chr3	122283290	G	C	0.00029	DTX3L,PARP9	+,-	FALSE
chr1	120612163	C	A	0.00812	NOTCH2	-	FALSE
chr1	173457017	C	T	0.00036	PRDX6	+	FALSE
chr2	50147865	T	A	0.00112	NRXN1	-	FALSE	(GT)n	SINE,Alu
chr1	120162442	T	C	0.00065	ZNF697	-	FALSE
chr8	48889705	A	G	0.00339	MCM4	+	TRUE	AluSx3	SINE,Alu
chr1	45975345	A	G	0.00227	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr4	152020782	C	T	0.00989	RPS3A	+	FALSE
chr1	114940228	C	T	0.00127	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	87211940	A	C	0.00164	SH3GLB1	+	FALSE
chr5	150647744	A	G	0.00036	GM2A	+	TRUE	AluSc	SINE,Alu
chr12	56215103	A	T	0.00353	DNAJC14	-	FALSE
chr3	195412715	T	C	0.00837	SDHAP2	+	FALSE
chr19	11945631	A	G	0.00091	ZNF440	+	TRUE	AluSp	SINE,Alu
chr2	37328034	T	C	1.98403E-05		.	FALSE
chr1	28825760	A	G	0.00802	PHACTR4	+	TRUE	AluSp	SINE,Alu
chr1	1252248	A	G	0.00503	CPSF3L	-	FALSE	AluSx	SINE,Alu
chr7	64441632	A	T	0.00038	ZNF117	-	FALSE
chr5	145666109	A	T	0.00728	RBM27	+	FALSE
chr2	152132130	A	G	0.00071	NMI	-	FALSE
chr1	16889639	T	C	0.00350	NBPF1	-	TRUE
chr1	209605646	A	C	0.00478	MIR205HG	+	FALSE	(AGC)n	SINE,Alu
chr1	36851360	G	A	0.00578	STK40	-	FALSE
chr1	28836975	A	G	0.00202	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr3	179117128	T	C	0.00276	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	11783295	G	A	0.00977		.	FALSE	MER58B	SINE,Alu
chr4	17802783	T	C	0.00509	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	16932429	C	G	0.00076	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	63881552	C	T	0.00021	ALG6	+	FALSE
chr4	17629921	A	G	0.00454		.	FALSE	MER90	SINE,Alu
chr1	110170896	T	C	5.12229E-06	AMPD2	+	FALSE
chr10	117823569	G	A	0.00391	GFRA1	-	FALSE	(ATC)n	SINE,Alu
chr4	17633798	A	G	0.00053	FAM184B	-	FALSE	AluSz	SINE,Alu
chr8	1730491	A	G	5.38446E-06	CLN8	+	TRUE	AluSx1	SINE,Alu
chr3	62189465	C	T	2.69664E-05	PTPRG	+	FALSE
chr5	74072634	T	A	0.00187	NSA2	+	FALSE
chr1	33148196	A	G	0.00529	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	27202960	T	C	0.00213		.	FALSE	AluSq2	SINE,Alu
chr1	8413317	A	C	0.00957	RERE	-	FALSE
chr1	1421186	C	T	0.00834	ATAD3B	+	FALSE
chr1	40539212	C	A	0.00380	PPT1	-	FALSE
chr1	28218100	T	C	0.00080	RPA2	-	FALSE
chr1	229762054	T	A	0.00084	URB2	+	FALSE
chr1	10517352	T	C	0.00983		.	FALSE	AluJr	SINE,Alu
chr1	145688983	A	G	0.00072	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	36068231	T	C	9.19439E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	16894514	C	T	0.00270	NBPF1	-	FALSE
chr1	6583066	T	C	0.00209	NOL9	-	TRUE	AluSx4	SINE,Alu
chr20	54963816	T	C	0.00750	AURKA	-	TRUE	AluSq10	SINE,Alu
chr19	42375584	A	G	0.00021		.	FALSE	AluSx	SINE,Alu
chr5	157185192	A	G	0.00835	LSM11	+	TRUE	AluSq	SINE,Alu
chr1	33277080	C	T	8.00797E-06	YARS	-	FALSE	LTR6A	SINE,Alu
chr3	172117457	C	A	0.00037	FNDC3B	+	FALSE
chr6	41567394	T	A	0.00717	FOXP4	+	FALSE
chr2	74332839	A	G	4.77205E-06	TET3	+	FALSE
chr12	53435627	A	G	0.00133	EIF4B	+	FALSE
chr3	40503559	C	G	0.00018	RPL14	+	FALSE
chr15	90820082	A	G	0.00297		.	FALSE	AluY	SINE,Alu
chr6	31324643	G	C	5.95617E-06		.	FALSE
chr1	1251631	T	C	0.00256	CPSF3L	-	TRUE	AluSz	SINE,Alu
chr5	151041869	T	A	0.00305	SPARC	-	FALSE
chr5	125961011	A	G	0.00075	PHAX	+	TRUE	AluSz	SINE,Alu
chr4	2940147	T	C	0.00061	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	35648711	A	C	0.00377	SFPQ	-	FALSE
chr3	48485493	A	G	7.09932E-12	TMA7	+	FALSE
chr5	138618619	A	G	0.00513	SNHG4,MATR3	+	TRUE	AluSx	SINE,Alu
chr1	154987526	C	T	0.00218	ZBTB7B	+	FALSE
chr4	17804785	T	C	0.00273	DCAF16	-	TRUE	AluSx	SINE,Alu
chr4	10076658	T	C	6.66134E-16	WDR1	-	FALSE
chr1	52306066	T	A	0.00154	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr1	161930908	G	A	0.00083	ATF6	+	FALSE
chr1	183155546	G	A	0.00103	LAMC2	+	FALSE
chr5	37290397	T	C	0.00305		.	FALSE	AluSz	SINE,Alu
chr4	7060959	T	C	0.00832	GRPEL1	-	FALSE
chr1	16200163	A	G	0.00112	SPEN	+	FALSE
chr1	143399383	T	A	0.00053		.	FALSE	L1MC4	SINE,Alu
chr1	16932495	A	C	0.00199	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	225707043	T	C	2.18813E-07	ENAH	-	FALSE
chr8	146280802	C	T	0.00492	C8orf33	+	FALSE	LTR13	SINE,Alu
chr15	83826212	C	T	0.00278	HDGFRP3	-	FALSE	(CTT)n	SINE,Alu
chr10	61548859	A	C	0.00011	CCDC6	-	FALSE
chr1	145284134	G	C	0.00203	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr2	151326173	A	C	0.00143	RND3	-	FALSE
chr1	45976259	A	C	0.00015	MMACHC	+	FALSE
chr1	155582104	T	A	0.00099	MSTO1	+	FALSE
chr1	46076462	A	G	0.00730	NASP	+	TRUE	AluSx	SINE,Alu
chr1	179042544	A	G	0.00722	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	243289448	G	A	0.00036	CEP170	-	FALSE
chr11	65179817	T	C	0.00599	FRMD8	+	FALSE
chr1	99164434	G	A	0.00911	SNX7	+	FALSE
chr4	165996811	T	C	6.80024E-05		.	FALSE	AluSg4	SINE,Alu
chr1	6282420	T	C	0.00133	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	1152631	C	A	0.00439	SDF4	-	FALSE
chr1	155429590	G	T	0.00356	ASH1L	-	FALSE
chr1	149581866	C	G	0.00774	LINC00623,LINC00869,LOC103091866	+	FALSE	L2b	SINE,Alu
chr20	18468339	T	C	0.00062	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr3	58112440	A	G	8.00661E-07	FLNB	+	FALSE
chr4	128756737	A	G	8.66859E-06		.	FALSE	AluSx	SINE,Alu
chr1	21795388	A	G	0.00790	NBPF3	+	FALSE
chr3	75779644	C	A	0.00177	ZNF717	-	FALSE
chr3	50150360	A	G	0.00651	RBM5	+	TRUE	AluSx	SINE,Alu
chr2	32533707	A	G	0.00395		.	FALSE	AluSp	SINE,Alu
chr20	54943385	C	A	0.00844	FAM210B	+	FALSE
chr1	164820482	T	A	0.00045	PBX1	+	FALSE
chr1	6582353	T	C	0.00415	NOL9	-	TRUE	AluSx1	SINE,Alu
chr1	26801731	G	T	0.00146	HMGN2	+	FALSE	(T)n	SINE,Alu
chr3	62282907	C	T	9.50704E-05	PTPRG-AS1	-	FALSE
chr3	195243006	C	A	0.00982	PPP1R2	-	FALSE
chr1	67874859	T	C	0.00209	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	9162362	T	C	0.00526		.	FALSE	AluSx	SINE,Alu
chr3	100083423	T	C	0.00678	TOMM70	-	FALSE	FAM	SINE,Alu
chr3	52873072	A	C	0.00233	TMEM110-MUSTN1,TMEM110	-	FALSE
chr3	196670090	G	A	6.78352E-09	NCBP2-AS2	+	FALSE
chr1	1345002	A	G	0.00141		.	FALSE	AluSg	SINE,Alu
chr4	165998078	T	C	0.00567	TMEM192	-	TRUE	AluSx	SINE,Alu
chr1	210006603	C	T	0.00829	DIEXF	+	FALSE
chr1	160990878	C	T	9.31086E-06	F11R	-	FALSE
chr1	207219603	T	C	0.00341	YOD1	-	FALSE
chr2	207174868	G	A	1.60070E-05	ZDBF2	+	FALSE
chr8	141461185	A	G	0.00793	TRAPPC9	-	FALSE
chr4	1066073	T	A	0.00387	RNF212	-	FALSE	L1MC1	SINE,Alu
chr18	47014856	T	A	0.00722	RPL17-C18orf32,RPL17	-	FALSE
chr1	9328120	A	G	0.00128	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	10519982	T	C	0.00129		.	FALSE	AluJr	SINE,Alu
chr1	39305002	A	T	0.00089	RRAGC	-	FALSE
chr12	133298019	A	G	2.77684E-05	PGAM5	+	TRUE	AluJo	SINE,Alu
chr2	101587455	C	T	0.00178	NPAS2	+	FALSE
chr2	102793246	A	G	0.00904	IL1R1	+	FALSE
chr20	29631557	A	G	0.00159	FRG1BP	+	FALSE
chr2	38971637	G	A	2.13337E-05	SRSF7	-	FALSE
chr1	11810674	G	A	0.00279	AGTRAP	+	FALSE
chr2	197021372	T	A	0.00285	STK17B	-	FALSE
chr1	11190646	G	A	0.00369	MTOR	-	FALSE
chr1	10520683	T	C	0.00058	DFFA	-	TRUE	AluSc8	SINE,Alu
chr12	56510700	G	A	2.03060E-05	RPL41	+	FALSE
chr5	108714298	T	C	0.00967	PJA2	-	FALSE
chr19	7084638	A	G	0.00508	ZNF557	+	TRUE	AluJb	SINE,Alu
chr1	150337289	G	T	0.00298	RPRD2	+	FALSE
chr1	14113455	G	A	0.00647	PRDM2	+	FALSE
chr14	65400786	T	G	0.00077	CHURC1-FNTB,CHURC1	+	FALSE	AluSx	SINE,Alu
chr6	31595882	C	A	0.00450		.	FALSE
chr3	5258236	G	C	3.37681E-06	EDEM1	+	FALSE
chr1	28662057	A	G	3.94650E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	20826784	T	C	0.00204	MUL1	-	FALSE
chr1	36067838	T	C	0.00348	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	10517352	T	C	0.00050		.	FALSE	AluJr	SINE,Alu
chr2	31611143	C	T	0.00117	XDH	-	FALSE
chr1	157094053	G	A	0.00740		.	FALSE	A-rich	SINE,Alu
chr1	16133978	T	C	0.00625	UQCRHL	-	FALSE
chr1	16112795	A	G	0.00499	FBLIM1	+	FALSE
chr4	128756656	A	G	0.00022		.	FALSE	AluSx	SINE,Alu
chr2	233446266	C	T	0.00177	EIF4E2	+	FALSE
chr1	1255402	C	G	0.00333	CPSF3L	-	FALSE	(GCAGG)n	SINE,Alu
chr8	143413136	C	T	0.00267	TSNARE1	-	FALSE
chr2	32535691	A	G	0.00023		.	FALSE	AluJb	SINE,Alu
chr1	16910172	G	A	0.00023	NBPF1	-	FALSE
chr1	24296849	T	C	0.00125		.	FALSE
chr17	10578246	A	G	0.00093		.	FALSE
chr2	32535865	A	G	0.00684		.	FALSE	AluJb	SINE,Alu
chr1	1662547	T	C	0.00556	SLC35E2	-	TRUE	AluY	SINE,Alu
chr1	38001685	T	C	0.00050	SNIP1	-	TRUE	AluSx	SINE,Alu
chr1	15904318	C	T	9.04121E-06	AGMAT	-	FALSE
chr1	145368461	A	C	0.00542	NBPF20,NBPF10	+	FALSE
chr3	14175262	T	C	3.06250E-10	TMEM43	+	FALSE
chr1	117532509	C	A	0.00521	PTGFRN	+	FALSE
chr3	72424929	A	G	0.00988	RYBP	-	FALSE
chr5	37290435	T	C	8.22232E-07		.	FALSE	AluSz	SINE,Alu
chr5	134260212	C	T	0.00264	PCBD2	+	FALSE
chr1	28826118	A	G	0.00948	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr12	101295434	A	G	0.00695	ANO4	+	FALSE
chr1	160967890	T	C	0.00876	F11R	-	TRUE	AluSp	SINE,Alu
chr1	110604747	G	A	0.00101	ALX3	-	FALSE
chr12	9464349	A	C	0.00042	LOC642846	+	FALSE
chr3	185826740	T	G	0.00041	ETV5	-	FALSE
chr1	234561498	T	C	0.00092	TARBP1	-	FALSE
chr1	144932197	T	A	0.00430	NBPF20,PDE4DIP	+,-	FALSE
chr1	212587320	T	C	0.00023	TMEM206	-	FALSE
chr1	1667419	A	C	0.00028	SLC35E2	-	FALSE	AluSg	SINE,Alu
chr3	195415462	G	A	0.00140	LINC00969,SDHAP2	+	FALSE
chr1	145116027	T	C	1.71852E-07	NBPF20,SEC22B	+	FALSE
chr6	26095484	A	G	0.00231		.	FALSE	AluY	SINE,Alu
chr1	20976589	C	T	0.00125	PINK1,PINK1-AS	+,-	FALSE
chr9	137332311	T	G	0.00036	RXRA	+	FALSE
chr2	55462744	C	A	0.00033	RPS27A	+	FALSE
chr7	300513	T	C	2.92808E-06	FAM20C	+	FALSE
chr1	213069114	C	A	0.00681	FLVCR1	+	FALSE
chr2	232328545	C	T	0.00581	NCL	-	FALSE
chr17	26672364	C	G	0.00645	TNFAIP1	+	FALSE
chr1	113672616	A	G	0.00940		.	FALSE	AluJb	SINE,Alu
chr3	10192744	A	G	3.36147E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	29041856	A	G	0.00756	GMEB1	+	TRUE	AluSq4	SINE,Alu
chr1	179327010	A	G	0.00085	SOAT1	+	TRUE
chr4	2951804	A	G	7.08227E-08	NOP14-AS1,NOP14	+,-	FALSE
chr2	25042625	C	G	0.00766	CENPO,ADCY3	+,-	FALSE
chr1	45975669	A	G	0.00695	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	169101257	A	T	0.00144	ATP1B1	+	FALSE
chr19	39433140	G	T	0.00260	FBXO17	-	FALSE	AluJb	SINE,Alu
chr2	8996326	C	T	0.00077	MBOAT2	-	FALSE
chr4	153701130	C	T	2.11271E-05	ARFIP1	+	FALSE
chr1	67518534	C	T	0.00030	SLC35D1	-	FALSE
chr9	131872852	G	C	0.00064	CRAT	-	FALSE
chr16	80636806	T	G	0.00926	CDYL2	-	FALSE
chr3	183900836	G	A	0.00658	AP2M1	+	FALSE
chrM	9988	T	C	0.00011		.	FALSE
chr1	155403831	A	G	0.00676	ASH1L,POU5F1P4	+,-	FALSE
chr1	86118417	T	G	0.00653	ZNHIT6	-	FALSE
chr1	145116147	T	A	0.00031	NBPF20,SEC22B	+	FALSE
chr1	26143725	A	T	0.00988	SEPN1	+	FALSE	AluSx	SINE,Alu
chr5	72801321	T	A	0.00427	BTF3	+	FALSE
chr9	96438975	T	C	0.00042	PHF2	+	FALSE	(CTCCAC)n	SINE,Alu
chr1	154323557	C	T	0.00018	ATP8B2	+	FALSE
chr1	53365235	G	C	0.00029	ECHDC2	-	FALSE
chr1	327441	A	G	1.08612E-09		.	FALSE
chr1	19810693	G	C	0.00042	CAPZB	-	FALSE
chr8	26435508	C	T	0.00106	DPYSL2	+	FALSE	(TC)n	SINE,Alu
chr2	74686329	C	T	0.00640	INO80B-WBP1,WBP1	+	FALSE
chr1	32373838	T	G	0.00376	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr7	28860031	A	T	0.00017	CREB5	+	FALSE
chr13	25473685	C	T	0.00580	CENPJ	-	FALSE
chr1	145513114	A	G	0.00033	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	65901227	A	T	0.00914	LEPR,LEPROT	+	FALSE	AluYh3	SINE,Alu
chr1	16889866	G	A	0.00051	NBPF1	-	FALSE
chr1	165877666	T	C	0.00327	UCK2	+	FALSE	(T)n	SINE,Alu
chr7	17384393	A	G	1.74996E-06	AHR	+	TRUE	AluSx	SINE,Alu
chr1	120286837	A	G	0.00153	PHGDH	+	FALSE
chr10	75008955	T	C	0.00058	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	160967856	T	C	0.00027	F11R	-	TRUE	AluSp	SINE,Alu
chr5	65108215	A	G	0.00052	NLN	+	FALSE
chr1	202992954	T	C	0.00042	TMEM183A	+	FALSE
chr1	45975673	A	G	0.00827	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr3	152882287	C	T	0.00774	RAP2B	+	FALSE
chr1	249139806	G	A	0.00983	ZNF672	+	FALSE
chr1	226573364	A	G	0.00128	PARP1	-	FALSE
chr17	73940888	T	C	2.69053E-06	ACOX1	-	TRUE	AluSx1	SINE,Alu
chr2	206987108	T	C	0.00015		.	FALSE	AluSx	SINE,Alu
chr5	151041884	T	A	0.00101	SPARC	-	FALSE
chr16	10623525	T	C	8.96209E-06	EMP2	-	TRUE	AluSp	SINE,Alu
chr9	125887702	C	T	0.00019	STRBP	-	FALSE
chr1	26796922	G	C	0.00401	DHDDS	+	FALSE	FLAM_C	SINE,Alu
chr3	124686323	A	T	0.00146	HEG1	-	FALSE
chr15	41597574	A	G	2.24597E-05		.	FALSE	AluSz6	SINE,Alu
chr10	1086810	T	A	0.00245	IDI2-AS1,IDI1	+,-	FALSE
chr1	6159719	C	T	4.79205E-09	KCNAB2	+	FALSE
chr1	31192650	T	G	0.00727	MATN1,MATN1-AS1	+,-	FALSE
chr6	160211652	C	G	0.00719	MRPL18	+	FALSE
chr1	9162223	T	C	0.00778		.	FALSE	AluSx	SINE,Alu
chr3	123368013	A	G	0.00812	MYLK	-	FALSE
chr1	9162223	T	C	0.00586		.	FALSE	AluSx	SINE,Alu
chr3	43098971	G	T	0.00118	FAM198A	+	FALSE	L1ME3G	SINE,Alu
chr1	145282904	A	G	0.00542	NBPF20,NOTCH2NL	+	FALSE	L2a	SINE,Alu
chr2	61369774	T	C	0.00267	LOC339803	-	TRUE	AluSx	SINE,Alu
chr5	70503890	A	T	0.00188		.	FALSE
chr1	116235186	A	G	0.00054	VANGL1	+	FALSE
chr1	144014068	T	C	0.00118		.	FALSE
chr5	180682610	T	C	0.00014	CTC-338M12.4	+	FALSE
chr4	39552022	T	C	0.00840	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	33149443	A	G	0.00897	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	1597403	C	T	0.00912	CDK11B,SLC35E2B	-	FALSE
chr2	132049924	A	G	0.00338	LOC440910	+	FALSE	AluSg4	SINE,Alu
chr2	191069434	G	A	0.00680	HIBCH	-	FALSE
chr2	110842200	C	A	0.00131	MALL	-	FALSE
chr1	33148706	A	G	0.00087	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr17	49041866	T	C	0.00153	SPAG9	-	TRUE	AluSx	SINE,Alu
chr1	19542354	T	C	0.00684	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr4	57326156	A	G	0.00230	PAICS	+	TRUE	AluJr	SINE,Alu
chr3	42591446	A	G	0.00012	SEC22C	-	FALSE
chr5	171533782	T	C	0.00039	STK10	-	FALSE
chr1	32953296	A	G	5.26589E-05	ZBTB8B	+	TRUE	AluSz	SINE,Alu
chr1	10364612	A	C	0.00860	KIF1B	+	FALSE
chr8	12884103	T	C	0.00033	KIAA1456	+	FALSE	MIR	SINE,Alu
chr3	170113815	G	T	0.00586	SKIL	+	FALSE
chr1	87213177	C	A	0.00020	SH3GLB1	+	FALSE
chr3	40503557	T	C	0.00746	RPL14	+	FALSE
chr3	100083425	G	A	0.00717	TOMM70	-	FALSE	FAM	SINE,Alu
chr20	25428750	A	G	3.17139E-06	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	145282904	A	G	0.00308	NBPF20,NOTCH2NL	+	FALSE	L2a	SINE,Alu
chr3	33430398	T	A	0.00025	UBP1	-	FALSE
chr1	27107948	G	A	0.00177	ARID1A	+	FALSE
chr1	120612194	C	G	1.19417E-05	NOTCH2	-	FALSE	(CCG)n	SINE,Alu
chr1	54571380	A	G	0.00332	TCEANC2	+	TRUE	AluSc	SINE,Alu
chr2	120439459	C	A	0.00273	TMEM177	+	FALSE
chr1	118069696	T	C	0.00170		.	FALSE
chr1	10517314	T	C	0.00802		.	FALSE	AluJr	SINE,Alu
chr2	143638994	G	A	0.00075	KYNU	+	FALSE
chr2	73480136	T	A	0.00281	CCT7	+	FALSE
chr3	20195395	C	T	3.65176E-06	KAT2B	+	FALSE
chr11	65179818	C	T	0.00799	FRMD8	+	FALSE
chr3	156258319	T	C	0.00012	SSR3	-	TRUE	AluYk3	SINE,Alu
chr12	27574433	A	G	0.00473	ARNTL2,ARNTL2-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	24798089	G	A	0.00815	NIPAL3	+	FALSE
chr1	161929879	A	T	0.00680	ATF6	+	FALSE
chr4	52753346	A	G	0.00782	DCUN1D4	+	TRUE	AluSc	SINE,Alu
chr6	29857113	C	A	0.00582		.	FALSE
chr1	118167515	C	T	0.00018	FAM46C	+	FALSE
chr3	97591153	C	T	0.00866	CRYBG3	+	FALSE
chr9	21863621	C	A	0.00123	MTAP	+	FALSE	AluY	SINE,Alu
chr8	95804615	A	G	0.00968	DPY19L4	+	TRUE	AluSq2	SINE,Alu
chr7	16899197	C	T	0.00926	AGR3	-	FALSE
chr1	53291395	A	G	0.00323	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr7	143003523	T	G	2.48474E-05	CASP2	+	FALSE	AluY	SINE,Alu
chr1	179044110	A	G	0.00176	FAM20B	+	TRUE	AluSx	SINE,Alu
chr7	44800040	C	A	0.00565	ZMIZ2	+	FALSE
chr1	36067784	T	C	2.18848E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	96350710	G	A	0.00302	LNPEP	+	FALSE
chr1	44818529	T	C	0.00310	ERI3	-	FALSE
chr1	38423183	C	T	0.00210	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	229730452	G	A	0.00236	TAF5L	-	FALSE
chr1	45976260	C	T	0.00043	MMACHC	+	FALSE
chr2	110373938	T	G	0.00413	SOWAHC	+	FALSE	(GAAT)n	SINE,Alu
chr2	217366194	C	A	0.00359		.	FALSE
chr1	20945055	C	T	0.00269	CDA	+	FALSE
chr5	53842079	C	T	0.00067	SNX18	+	FALSE
chr1	28661653	A	G	0.00053	MED18	+	TRUE	AluSg	SINE,Alu
chr2	130795675	C	T	0.00578	FAR2P1	-	FALSE
chr1	46032311	A	G	0.00043	AKR1A1	+	FALSE
chr12	53807911	A	T	0.00355	SP1	+	FALSE
chr7	128097846	A	G	0.00015	HILPDA	+	TRUE	AluSx1	SINE,Alu
chr1	95362949	A	T	0.00114	CNN3	-	FALSE	(A)n	SINE,Alu
chr7	20177613	T	C	0.00913	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr2	206984202	T	C	0.00849		.	FALSE	AluSx	SINE,Alu
chr1	36068210	T	C	0.00119	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	5259480	T	A	5.79324E-05	EDEM1	+	FALSE
chr1	22159774	G	A	0.00257	HSPG2	-	FALSE
chr5	38478065	T	A	0.00049	LIFR	-	FALSE
chr1	32479707	G	A	0.00000	KHDRBS1	+	FALSE
chr1	19542410	T	C	0.00270	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	144931330	C	T	0.00066	NBPF20,PDE4DIP	+,-	FALSE
chr2	170488325	A	G	0.00698	PPIG	+	FALSE
chr1	87811100	A	T	0.00084	LMO4	+	FALSE
chr16	46831408	T	C	0.00852		.	FALSE	AluSz	SINE,Alu
chr1	179829595	T	C	0.00115	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr12	133298465	A	G	5.98085E-08	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	36067784	T	C	1.34898E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	120572572	C	T	0.00084	NOTCH2	-	FALSE
chr13	46700519	C	A	0.00089	LCP1	-	FALSE
chr1	1419768	A	G	0.00250	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	120695202	C	A	0.00033		.	FALSE
chr1	45452227	G	C	0.00279	EIF2B3	-	FALSE
chr1	28826085	A	G	0.00281	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr3	10192704	A	G	0.00091	VHL	+	TRUE	AluSx1	SINE,Alu
chr16	10626624	T	C	0.00334	EMP2	-	FALSE	(T)n	SINE,Alu
chr1	10521254	T	C	0.00684	DFFA	-	TRUE	AluY	SINE,Alu
chr2	29023121	G	T	0.00077	PPP1CB	+	FALSE
chr1	201845880	T	A	0.00491	IPO9	+	FALSE
chr2	133104541	A	G	0.00109		.	FALSE
chr1	144595943	A	G	0.00050	NBPF20	+	FALSE	AluJb	SINE,Alu
chr5	34906750	T	C	0.00527	RAD1	-	TRUE	AluJo	SINE,Alu
chr14	74526945	T	C	2.53258E-07	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr3	194790434	C	G	0.00705	XXYLT1	-	FALSE
chr1	14604	A	G	0.00304	WASH7P	-	FALSE
chr20	36147563	T	C	0.00313	BLCAP	-	TRUE
chr19	4654601	A	G	0.00016	TNFAIP8L1	+	TRUE	AluJb	SINE,Alu
chr15	90819655	A	G	0.00174		.	FALSE	AluSx	SINE,Alu
chr1	28662253	A	G	0.00117	MED18	+	TRUE	AluSq2	SINE,Alu
chr3	181430146	C	A	0.00256	SOX2-OT,SOX2	+	FALSE
chr2	232319611	A	T	3.84700E-07	NCL	-	FALSE
chr2	37329300	T	C	0.00092		.	FALSE	AluJr4	SINE,Alu
chr1	33086876	T	C	0.00075	ZBTB8OS	-	TRUE	AluY	SINE,Alu
chr1	160966299	T	C	1.46976E-05	F11R	-	TRUE	AluSg	SINE,Alu
chr2	99772813	A	G	1.48642E-06	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr1	144916748	C	G	0.00354	NBPF20,PDE4DIP	+,-	FALSE
chr5	79923293	T	C	0.00039	DHFR	-	TRUE	AluJr	SINE,Alu
chr3	194999609	G	T	0.00796	ACAP2	-	FALSE
chr1	11181327	C	T	0.00525	MTOR	-	FALSE
chr1	183486859	G	A	0.00831	SMG7	+	FALSE
chr1	16957414	C	T	0.00116		.	FALSE
chr2	37331753	T	C	0.00026		.	FALSE	AluJb	SINE,Alu
chr8	145139727	C	T	0.00458	GPAA1	+	FALSE
chr6	150047362	T	C	0.00076	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	78414310	C	A	9.26299E-05	FUBP1	-	FALSE
chr1	168214098	T	G	0.00134		.	FALSE
chr2	206983075	T	C	0.00083		.	FALSE	AluJb	SINE,Alu
chr2	101622887	G	A	0.00711	RPL31	+	FALSE
chr1	92862826	A	G	0.00100		.	FALSE	AluJr	SINE,Alu
chr1	51873951	G	A	0.00591	EPS15	-	FALSE
chr3	179117241	T	C	0.00133	GNB4	-	TRUE	AluSz	SINE,Alu
chr6	34254585	G	T	0.00519		.	FALSE	AluSq2	SINE,Alu
chr5	151041885	G	T	0.00644	SPARC	-	FALSE
chr8	95805071	A	G	1.12730E-06	DPY19L4	+	TRUE	AluYf1	SINE,Alu
chr3	196771049	T	C	0.00010	DLG1	-	FALSE
chr1	145116149	T	A	0.00585	NBPF20,SEC22B	+	FALSE
chr15	42550349	A	C	0.00120	TMEM87A	-	FALSE

RBP	CHD9
Knock-Method	shRNA
RBP Family	BRK
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	4
Species	Human
Data Source	GEO
Profile ID	GSE148803
Platform	GPL11154
Pubmed ID	N.A.

CHD9 - Target Gene Network