RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	145689537	A	G	0.00028	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr8	144681777	G	T	0.00383	TIGD5	+	FALSE
chr20	25428617	A	G	0.00622	GINS1	+	FALSE	AluJb	SINE,Alu
chr15	41593269	A	G	0.00196		.	FALSE	AluSz6	SINE,Alu
chr7	99055940	T	C	0.00289	ATP5J2-PTCD1,ATP5J2	-	FALSE
chr1	148003749	T	C	0.00517	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr7	16823610	T	G	0.00765	TSPAN13	+	FALSE
chr1	47746678	G	C	0.00328	STIL	-	FALSE
chr1	146650337	G	T	0.00589	PDIA3P1	+	FALSE
chr5	81571271	T	G	0.00827	RPS23	-	FALSE
chr14	74524774	T	C	0.00906	BBOF1,ALDH6A1	+,-	FALSE	AluSc8	SINE,Alu
chr2	191745653	T	G	0.00030	GLS	+	FALSE
chr7	35840866	A	G	0.00947	SEPT7	+	FALSE
chrX	118672600	T	C	0.00080	CXorf56	-	TRUE	AluSx	SINE,Alu
chr11	93474585	T	G	0.00531	TAF1D	-	FALSE
chr4	101946459	C	T	0.00245	PPP3CA	-	FALSE	(T)n	SINE,Alu
chr5	149823789	G	T	0.00793		.	FALSE
chr1	19542464	T	C	0.00140	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr5	162902516	T	C	0.00226	HMMR	+	FALSE
chr1	3731655	G	T	0.00985	CEP104	-	FALSE
chr19	53914448	A	G	0.00583	ZNF765	+	TRUE	AluSx	SINE,Alu
chr4	6676407	G	C	0.00178	LOC93622	+	FALSE
chr1	21810022	A	T	0.00218	NBPF3	+	FALSE
chr3	140695493	C	A	0.00559	SLC25A36	+	FALSE
chr12	1602602	A	G	8.31525E-05	ERC1	+	FALSE	AluSx	SINE,Alu
chr17	79838088	T	C	6.81311E-05		.	FALSE	AluSx	SINE,Alu
chr4	42088291	C	A	0.00000	SLC30A9	+	FALSE
chr6	42855972	A	G	0.00182	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	28567501	A	G	0.00887		.	FALSE
chr12	3150859	C	T	0.00317		.	FALSE	(CCTCCCTG)n	SINE,Alu
chr1	10519936	T	C	0.00029		.	FALSE	AluJr	SINE,Alu
chr1	53289790	C	T	0.00281	ZYG11B	+	FALSE	AluSz	SINE,Alu
chr2	46839477	T	C	0.00033	PIGF	-	FALSE
chr3	185009713	G	T	0.00106	MAP3K13	+	FALSE
chr3	5222483	T	G	1.83612E-05	ARL8B	+	FALSE
chr3	49315592	T	C	0.00127	USP4	-	FALSE
chr5	79923293	T	C	0.00039	DHFR	-	TRUE	AluJr	SINE,Alu
chr2	230876757	G	C	0.00321	FBXO36	+	FALSE
chr1	10519064	T	C	0.00012		.	FALSE	AluSx3	SINE,Alu
chr1	47140872	T	C	0.00081	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr1	28835934	A	G	0.00069	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	10519910	T	C	0.00735		.	FALSE	AluJr	SINE,Alu
chr1	247319706	A	T	2.37466E-05	ZNF124	-	FALSE
chr19	7116734	A	T	0.00981	INSR	-	FALSE	(A)n	SINE,Alu
chr6	79647408	T	G	0.00561	PHIP	-	FALSE
chr1	144596446	A	G	0.00124	NBPF20	+	TRUE	AluJb	SINE,Alu
chr2	128950548	A	G	0.00589	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	120455441	A	G	0.00872	NOTCH2	-	FALSE
chr1	94032944	C	T	0.00147	BCAR3	-	FALSE
chr8	56985608	A	T	0.00077	RPS20	-	FALSE
chr1	10041422	A	G	0.00115	NMNAT1	+	TRUE	AluYj4	SINE,Alu
chr1	113213004	G	T	0.00206	CAPZA1	+	FALSE
chr4	140310370	T	C	0.00335	NAA15	+	FALSE	(T)n	SINE,Alu
chr1	35644504	A	T	0.00242	SFPQ	-	FALSE
chr2	32535568	A	G	0.00192		.	FALSE	MER8	SINE,Alu
chr1	205320469	G	A	0.00109	KLHDC8A	-	FALSE
chr3	5257981	T	A	3.55991E-06	EDEM1	+	FALSE	(ATTTT)n	SINE,Alu
chr1	94703005	C	G	0.00180	ARHGAP29	-	FALSE
chr7	38763068	T	C	0.00361		.	FALSE	AluSx3	SINE,Alu
chr1	33148118	A	G	0.00316	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr19	36033460	C	T	0.00622	GAPDHS,TMEM147-AS1	+,-	FALSE
chr1	10520202	T	C	0.00529		.	FALSE	AluSx	SINE,Alu
chr2	204162036	A	G	0.00369	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr1	33149375	A	G	0.00840	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr5	71654855	G	C	0.00414	PTCD2	+	FALSE
chr5	40832557	G	T	5.89786E-05	RPL37	-	FALSE
chr4	89180334	T	C	0.00224	PPM1K	-	TRUE	AluSx4	SINE,Alu
chrX	2824979	T	C	0.00049	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	214529742	T	C	6.22071E-05	PTPN14	-	TRUE
chr1	230415244	T	C	0.00360	GALNT2	+	FALSE
chr1	28836975	A	G	0.00202	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	207943211	G	A	0.00248	CD46	+	FALSE	AluSx1	SINE,Alu
chr1	19542310	T	C	0.00510	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	37429737	A	G	0.00549	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr22	17129526	A	G	0.00485	TPTEP1	+	TRUE	AluSz	SINE,Alu
chr1	16889639	T	C	0.00745	NBPF1	-	TRUE
chr1	44685732	T	C	8.08877E-10	DMAP1	+	FALSE
chr4	17804872	T	C	0.00096	DCAF16	-	TRUE	AluSx	SINE,Alu
chr12	44181367	G	A	0.00608	IRAK4	+	FALSE	MLT1E1A	SINE,Alu
chr1	205583610	T	C	0.00501	ELK4	-	FALSE
chr19	18476176	A	G	0.00452	PGPEP1	+	TRUE	AluJb	SINE,Alu
chr7	16899197	C	T	0.00926	AGR3	-	FALSE
chr7	154796233	A	G	0.00545	PAXIP1-AS1	+	TRUE	AluSx3	SINE,Alu
chr17	49042381	T	C	0.00931	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	19542250	T	C	0.00015	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	156259314	T	C	2.71784E-05	SSR3	-	TRUE	AluSq2	SINE,Alu
chr12	26809316	G	A	0.00150	ITPR2	-	FALSE
chr2	96850885	T	C	0.00699	STARD7	-	FALSE
chr1	11979809	A	C	0.00744	KIAA2013	-	FALSE
chr2	203745105	T	C	0.00644		.	FALSE	AluSx	SINE,Alu
chr3	196670094	G	C	0.00017	NCBP2-AS2	+	FALSE
chr5	174955746	G	C	0.00768	SFXN1	+	FALSE
chr2	87820785	C	T	0.00110	LINC00152	+	FALSE
chr1	16933583	T	C	0.00050	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr15	90819444	A	G	5.90002E-05		.	FALSE	AluSx	SINE,Alu
chr2	38975954	A	C	0.00381	SRSF7	-	FALSE
chr1	9643028	A	G	0.00017		.	FALSE	AluSx	SINE,Alu
chr3	25777072	C	T	4.38639E-06	NGLY1	-	FALSE	L1MEg	SINE,Alu
chr20	29631627	T	C	0.00040	FRG1BP	+	FALSE
chr10	101992810	T	C	0.00456	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr1	168220489	A	G	0.00126		.	FALSE	AluSz6	SINE,Alu
chr2	30381505	T	C	0.00820	YPEL5	+	FALSE
chr15	45366812	A	G	0.00446	SORD	+	FALSE
chr1	10521130	T	C	0.00860	DFFA	-	TRUE	AluY	SINE,Alu
chr1	31342374	A	C	0.00446	SDC3	-	FALSE	(A)n	SINE,Alu
chr1	204520442	A	G	7.81381E-05	MDM4	+	TRUE	AluJb	SINE,Alu
chr12	102517753	T	C	0.00022	PARPBP	+	FALSE
chr3	197612334	A	G	0.00070		.	FALSE	AluSp	SINE,Alu
chr3	45636335	A	G	0.00262	LIMD1	+	FALSE	(AC)n	SINE,Alu
chr1	23636875	T	A	0.00686	HNRNPR	-	FALSE
chr1	204520250	A	G	0.00706	MDM4	+	TRUE	AluJb	SINE,Alu
chr7	44917351	T	C	0.00338	PURB	-	TRUE	AluSz	SINE,Alu
chr3	188596752	A	G	0.00203	LPP	+	FALSE
chr1	62628606	A	G	0.00164	PATJ	+	TRUE	AluSg4	SINE,Alu
chr1	10044366	A	G	0.00531	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr1	10093749	T	C	0.00521	UBE4B	+	FALSE
chr5	75003678	T	C	0.00435	POC5	-	FALSE
chr19	9672989	T	C	0.00044		.	FALSE	AluSx3	SINE,Alu
chr3	170114078	A	C	0.00219	SKIL	+	FALSE
chr3	197611048	A	G	0.00573		.	FALSE	AluSx1	SINE,Alu
chr2	206987228	T	C	0.00052		.	FALSE	AluSx	SINE,Alu
chr1	33148635	A	G	5.38540E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	36770599	G	T	0.00123	THRAP3	+	FALSE	(T)n	SINE,Alu
chr6	3225721	C	G	4.80019E-07	TUBB2B	-	FALSE
chr2	3459371	G	A	0.00091	TRAPPC12	+	FALSE	L1MA2	SINE,Alu
chr4	128756628	A	G	0.00011		.	FALSE	AluSx	SINE,Alu
chr4	84525973	C	G	0.00148	GPAT3	+	FALSE
chr9	132268440	A	G	3.40625E-05	LINC00963	+	TRUE	AluJb	SINE,Alu
chr1	46078630	A	G	0.00131	NASP	+	FALSE
chr1	36068369	T	C	0.00207	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	74672474	G	A	0.00292	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr1	47844403	C	A	0.00511	CMPK1	+	FALSE
chr1	153720690	G	A	0.00786	INTS3	+	FALSE
chr3	124686323	A	T	0.00146	HEG1	-	FALSE
chr1	168220341	A	G	0.00179		.	FALSE	AluSz6	SINE,Alu
chr2	86731651	G	A	0.00378	CHMP3,RNF103-CHMP3	-	FALSE
chr3	191114309	A	T	1.88175E-05	CCDC50	+	FALSE
chr8	144357992	A	G	0.00780	GLI4	+	FALSE
chr1	53288870	A	G	0.00184	ZYG11B	+	TRUE	AluJo	SINE,Alu
chrX	24095065	G	T	0.00291	EIF2S3	+	FALSE
chr1	143189076	G	A	0.00048	LOC102723769	-	FALSE
chr2	162165008	A	T	0.00539	PSMD14	+	FALSE
chr7	4810530	G	A	0.00236	FOXK1	+	FALSE	(GT)n	SINE,Alu
chr1	93803522	T	C	0.00163	CCDC18-AS1	-	TRUE	AluJr	SINE,Alu
chr2	38971641	T	A	0.00071	SRSF7	-	FALSE
chr2	203742188	T	C	0.00522		.	FALSE	AluJb	SINE,Alu
chr3	15112631	A	G	0.00019	RBSN	-	FALSE
chr1	179044181	A	G	1.64117E-06	FAM20B	+	TRUE	AluSx	SINE,Alu
chr20	35520977	T	C	0.00359	TLDC2,SAMHD1	+,-	FALSE	FLAM_A	SINE,Alu
chr3	45721874	A	G	0.00296	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	31344628	T	A	0.00085	SDC3	-	FALSE
chr1	39470978	T	A	0.00378	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr1	220231982	T	C	0.00328	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	15992470	G	A	0.00605		.	FALSE
chr1	36067760	T	C	0.00044	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	9160982	T	C	0.00350		.	FALSE	AluJb	SINE,Alu
chr14	51387782	C	T	0.00802	PYGL	-	FALSE
chr1	21808159	G	A	9.34000E-05	NBPF3	+	FALSE
chr17	43248581	C	T	0.00012	LOC105371795	-	FALSE
chr1	206579798	T	C	0.00883	SRGAP2	+	FALSE
chr3	44790759	T	C	0.00744	KIAA1143	-	TRUE	AluY	SINE,Alu
chr8	8750467	A	G	0.00131	MFHAS1	-	FALSE
chr1	27205871	G	T	0.00931		.	FALSE
chr1	15832543	T	C	0.00553	CASP9	-	FALSE
chr1	65299558	C	T	0.00162	JAK1	-	FALSE
chr1	45975669	A	G	0.00695	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	79110518	A	G	0.00997	IFI44L	+	FALSE
chr1	26144433	T	C	0.00476	SEPN1	+	FALSE
chr1	19586532	A	G	0.00166	MRTO4	+	TRUE	AluSz	SINE,Alu
chr6	100005419	A	G	2.18273E-06	CCNC	-	FALSE	AluSg	SINE,Alu
chr1	114940216	T	G	0.00148	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	54692334	T	C	0.00021	SSBP3	-	FALSE	(T)n	SINE,Alu
chr1	1662793	T	C	0.00489	SLC35E2	-	TRUE	AluY	SINE,Alu
chr4	1006333	G	A	0.00117	FGFRL1	+	FALSE	(CTG)n	SINE,Alu
chrX	2824317	T	C	0.00047	ARSD	-	TRUE	AluJb	SINE,Alu
chr1	150548883	A	C	0.00255	MCL1	-	FALSE
chr1	36067925	T	C	0.00103	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	213071445	G	A	0.00233	FLVCR1	+	FALSE	MIR3	SINE,Alu
chr6	71299074	A	G	0.00824		.	FALSE	AluSx1	SINE,Alu
chr3	45721827	C	A	0.00142	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr2	192555178	C	T	0.00112	LOC105747689	+	FALSE
chr1	234744480	G	A	0.00409	IRF2BP2	-	FALSE
chr1	10519912	T	C	0.00750		.	FALSE	AluJr	SINE,Alu
chr5	43380781	T	C	0.00739	CCL28	-	TRUE	AluJb	SINE,Alu
chr14	75202722	A	G	0.00022	FCF1	+	TRUE	AluSc	SINE,Alu
chr19	13884422	A	G	0.00878	MRI1	+	TRUE	AluJr	SINE,Alu
chr6	108364582	T	C	0.00577	OSTM1	-	FALSE
chr20	35520229	T	C	3.77169E-05	TLDC2,SAMHD1	+,-	FALSE	AluSx3	SINE,Alu
chr16	80636806	T	G	0.00926	CDYL2	-	FALSE
chr1	200375418	C	T	0.00671	ZNF281	-	FALSE
chr1	2336210	C	T	0.00175	RER1	+	FALSE
chr1	19543249	T	C	0.00564	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	151862656	T	C	0.00933	THEM4	-	TRUE	AluSp	SINE,Alu
chr1	144931727	G	A	0.00521	NBPF20,PDE4DIP	+,-	FALSE
chr3	14986453	T	C	1.05842E-07	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	20976075	T	C	0.00351	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	202696878	C	T	0.00159	KDM5B	-	FALSE
chr1	149577127	G	C	0.00709	LINC00623,LINC00869,LOC103091866	+	FALSE
chr1	44415424	A	G	0.00213	IPO13	+	FALSE
chr4	7764017	T	C	0.00028	AFAP1,AFAP1-AS1	+,-	FALSE
chr20	18468633	C	A	3.51877E-10	RBBP9	-	FALSE
chr4	39550967	T	C	2.19217E-06	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr5	36143413	G	A	0.00097	LMBRD2	-	FALSE
chr3	49396588	T	C	0.00533	RHOA	-	FALSE
chr8	48890288	A	G	0.00210	MCM4	+	TRUE	AluJb	SINE,Alu
chr3	75779650	G	C	0.00116	ZNF717	-	FALSE
chr6	143661166	A	C	0.00536	AIG1	+	FALSE
chr1	92862337	A	G	0.00595		.	FALSE	AluSp	SINE,Alu
chr1	19542310	T	C	0.00112	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	196080624	T	C	0.00795	UBXN7	-	TRUE	AluSx	SINE,Alu
chr10	51374391	C	G	0.00028	TIMM23B	+	FALSE
chr1	145688983	A	G	0.00101	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr12	120898728	A	G	0.00566	GATC	+	TRUE	AluY	SINE,Alu
chr1	23636274	G	T	0.00032	HNRNPR	-	FALSE
chr17	79514129	G	A	0.00164	FAAP100	-	FALSE
chr16	11931210	G	T	0.00292	RSL1D1	-	FALSE
chr5	74063154	C	G	0.00255	GFM2,NSA2	+,-	FALSE
chr1	1653046	T	A	0.00217	CDK11B,CDK11A	-	FALSE
chr4	6302519	G	A	0.00195	WFS1	+	FALSE
chr17	73939212	T	C	0.00376	ACOX1	-	TRUE	AluSx1	SINE,Alu
chr4	109733172	T	C	0.00480	COL25A1	-	FALSE
chr1	86118417	T	G	0.00653	ZNHIT6	-	FALSE
chr1	53289686	A	G	0.00063	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	3745924	G	A	0.00612	CEP104	-	FALSE
chr2	85546474	T	C	0.00051	TGOLN2	-	TRUE	AluSc	SINE,Alu
chr1	10518734	T	C	0.00249		.	FALSE	AluSx1	SINE,Alu
chr1	16933135	G	T	0.00937	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	68940885	G	A	0.00022	DEPDC1	-	FALSE	MIR	SINE,Alu
chr11	8707394	T	A	4.23595E-06	RPL27A	+	FALSE
chr3	197612430	A	G	0.00052		.	FALSE	AluSp	SINE,Alu
chr1	91486839	T	C	0.00329	ZNF644	-	FALSE
chr6	105546950	T	C	0.00443	BVES	-	TRUE	AluJb	SINE,Alu
chr1	169799880	G	T	0.00118	C1orf112	+	FALSE
chr2	65432447	C	T	0.00486		.	FALSE
chr2	61413040	T	A	0.00675	AHSA2	+	FALSE	(ATTTTAT)n	SINE,Alu
chr11	28134974	C	A	0.00479	METTL15	+	FALSE
chr1	24798068	C	A	0.00686	NIPAL3	+	FALSE	AluJr	SINE,Alu
chr3	12877522	A	T	0.00956	RPL32	-	FALSE
chr1	10518921	C	T	0.00398		.	FALSE	AluSx3	SINE,Alu
chr17	18111804	T	G	0.00487	ALKBH5	+	FALSE	(TTTTGTT)n	SINE,Alu
chr3	37407770	G	T	0.00530	GOLGA4	+	FALSE
chr9	136209396	C	T	0.00126	MED22	-	FALSE
chr1	36770605	C	T	8.58098E-05	THRAP3	+	FALSE	(T)n	SINE,Alu
chr12	93192784	C	T	0.00423	EEA1	-	FALSE
chr5	34906692	T	C	0.00021	RAD1	-	TRUE	AluJo	SINE,Alu
chr7	25160004	T	C	0.00915	CYCS	-	TRUE
chr22	39069181	T	C	0.00346	CBY1	+	FALSE
chr1	179852074	T	C	0.00309	TOR1AIP1	+	FALSE
chr1	22200473	C	T	0.00039	HSPG2	-	FALSE
chr1	109475572	A	G	0.00096	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr3	119212012	A	C	0.00976	POGLUT1	+	FALSE
chr1	19542239	T	C	0.00032	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	20976211	T	C	0.00833	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	19542401	T	C	0.00052	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	9324213	C	T	0.00063	H6PD	+	FALSE
chr1	566678	C	T	0.00559		.	FALSE
chr1	45279903	C	T	0.00052		.	FALSE	(TCTT)n	SINE,Alu
chr3	112319504	T	C	0.00040	LINC01279	-	TRUE	AluJb	SINE,Alu
chr1	145369589	T	C	0.00128	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr7	63808867	C	A	0.00556	ZNF736	+	FALSE
chr1	145512937	A	G	1.47906E-06	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	25893928	T	A	0.00388	LDLRAP1	+	FALSE
chr6	42856019	A	G	0.00184	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr2	11323106	G	T	0.00860	ROCK2	-	FALSE	(TA)n	SINE,Alu
chr2	172178680	T	C	9.91686E-05	METTL8	-	TRUE	AluSx3	SINE,Alu
chr5	134236287	A	G	0.00538	TXNDC15	+	TRUE	AluSq	SINE,Alu
chr8	104312341	A	G	0.00692	FZD6	+	FALSE
chr1	40430967	G	T	0.00567	MFSD2A	+	FALSE
chr16	10623666	T	C	1.68352E-07	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	36923643	G	C	0.00409	MRPS15	-	FALSE
chr2	85548854	T	C	0.00097	TGOLN2	-	FALSE
chr1	27202844	T	C	0.00076		.	FALSE	AluSq2	SINE,Alu
chr1	118167515	C	T	3.85084E-05	FAM46C	+	FALSE
chr1	117644949	C	G	0.00862	TTF2	+	FALSE
chr1	45975628	A	G	0.00413	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	2121118	C	T	0.00234	FAAP20	-	FALSE
chr2	68402797	T	A	0.00656	PNO1	+	FALSE
chr11	94801633	A	T	0.00808	SRSF8	+	FALSE
chr19	56090351	C	T	1.52943E-09	ZNF579	-	FALSE
chr15	74319733	A	G	0.00524	PML	+	TRUE	AluJr	SINE,Alu
chr1	9162933	C	T	0.00088		.	FALSE
chr6	42855979	A	G	8.12389E-06	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	46830257	C	T	0.00208	NSUN4	+	FALSE	AluSx1	SINE,Alu
chr1	148251952	C	A	0.00905	NBPF8,NBPF14,NBPF9	-	FALSE
chr6	43747964	G	A	0.00542	VEGFA	+	FALSE
chr1	3545191	C	T	0.00165	TPRG1L	+	FALSE
chr5	115165591	T	C	0.00407	ATG12	-	TRUE	AluSq2	SINE,Alu
chr1	21100856	A	C	0.00010	HP1BP3	-	FALSE	(AC)n	SINE,Alu
chr1	28825418	A	G	0.00525	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	117531179	G	A	0.00116	PTGFRN	+	FALSE
chr1	179070187	G	A	0.00556	ABL2	-	FALSE
chr2	203922075	A	G	0.00561	NBEAL1	+	FALSE
chr1	40537944	C	A	0.00506	CAP1	+	FALSE
chr2	86249961	T	C	0.00292	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	10520378	T	C	0.00743		.	FALSE	AluSx1	SINE,Alu
chr2	55516908	A	G	0.00016	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr5	79279310	T	A	0.00173	MTX3	-	FALSE
chr1	19543349	T	C	2.12419E-08	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	19542458	T	C	1.01966E-05	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	198255334	A	T	0.00551		.	FALSE
chr1	200375848	C	T	0.00586	ZNF281	-	FALSE	(T)n	SINE,Alu
chr1	20978024	C	A	0.00175	PINK1-AS	-	FALSE
chr1	22419433	T	G	0.00156	CDC42	+	FALSE
chr1	52817434	T	C	0.00219	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr4	2940364	T	C	0.00329	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	148558170	T	C	0.00235		.	FALSE	AluJb	SINE,Alu
chr7	138730361	T	C	0.00316	ZC3HAV1	-	FALSE	L2-1_AMi	SINE,Alu
chr1	241792562	A	G	0.00800	OPN3,CHML	-	FALSE
chr12	69237020	A	G	0.00150	MDM2	+	TRUE
chr1	15818090	T	C	0.00089	CASP9	-	TRUE	AluJb	SINE,Alu
chr4	17803026	T	C	0.00396	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	53291434	A	G	0.00124	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	114940228	C	T	0.00734	TRIM33	-	FALSE	(T)n	SINE,Alu
chr2	242164677	A	G	0.00117	ANO7	+	TRUE	AluSg	SINE,Alu
chr16	11445552	T	C	0.00533	RMI2	+	FALSE
chr1	16893686	G	C	0.00171	NBPF1	-	FALSE
chr2	172178588	T	C	0.00248	METTL8	-	TRUE	AluSx3	SINE,Alu
chr1	24296708	A	G	0.00512		.	FALSE
chr1	19542311	T	C	0.00682	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr10	51026705	C	G	0.00456	PARG	-	FALSE
chr2	208619377	A	G	0.00769	CCNYL1	+	TRUE	FAM	SINE,Alu
chr4	5830393	C	T	0.00220	CRMP1	-	FALSE
chr1	1622754	A	G	0.00221	CDK11B,SLC35E2B	-	FALSE	MLT1F2	SINE,Alu
chr2	101622888	T	A	0.00210	RPL31	+	FALSE
chr1	11347152	A	T	0.00401	UBIAD1	+	FALSE
chr1	150281011	A	G	0.00016	MRPS21	+	TRUE	AluSz	SINE,Alu
chr2	37328034	T	C	0.00047		.	FALSE
chr2	203743821	T	C	0.00880		.	FALSE	AluSx3	SINE,Alu
chr1	16890630	T	G	0.00147	NBPF1	-	FALSE
chr6	42857111	A	G	0.00021	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr1	32801694	A	C	0.00847	MARCKSL1	-	FALSE
chr1	46830447	A	C	0.00168	NSUN4	+	FALSE	LTR108a_Mam	SINE,Alu
chr15	90375419	T	C	0.00521	C15orf38-AP3S2,AP3S2	-	TRUE	AluJr	SINE,Alu
chr6	132780768	G	A	0.00668	STX7	-	FALSE
chr7	20178420	T	C	0.00053	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr2	27293349	C	T	0.00503	AGBL5,OST4	+,-	FALSE
chr3	14986110	T	C	1.11022E-16	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	1337736	C	G	0.00012	MRPL20	-	FALSE
chr20	29631557	A	G	0.00159	FRG1BP	+	FALSE
chr1	28566320	T	C	0.00309		.	FALSE	AluSx1	SINE,Alu
chr2	91843471	C	T	0.00095	LOC654342	-	FALSE
chr9	19376252	A	T	0.00367		.	FALSE
chr5	130494984	A	T	0.00018	HINT1	-	FALSE
chr1	10517527	T	C	0.00430		.	FALSE	AluSx1	SINE,Alu
chr2	132275343	G	T	0.00334	LOC150776	+	FALSE
chr1	881627	G	A	2.43828E-05	NOC2L	-	FALSE
chr1	53291420	A	G	0.00069	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	59148136	T	C	0.00244	MYSM1	-	FALSE
chr2	37333924	T	C	0.00298	EIF2AK2	-	FALSE	AluSz	SINE,Alu
chr4	57326315	A	G	0.00025	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	26755229	A	G	0.00318	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr12	121769840	T	C	0.00499	ANAPC5	-	TRUE	AluJr	SINE,Alu
chr1	143135057	G	A	0.00403	LOC102723769	-	FALSE
chr1	145512078	A	G	0.00099	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr12	69237507	A	G	0.00889	MDM2	+	TRUE
chr5	137354051	C	T	0.00098	FAM13B	-	FALSE
chr7	75958151	G	C	0.00250	YWHAG	-	FALSE
chr1	117529752	C	A	0.00024	PTGFRN	+	FALSE
chr14	23794557	T	A	0.00983	BCL2L2-PABPN1,PABPN1	+	FALSE	A-rich	SINE,Alu
chr4	6675519	A	C	0.00064	LOC105374366	-	FALSE
chr19	37073373	T	C	0.00492	ZNF529,ZNF529-AS1	+,-	FALSE	AluY	SINE,Alu
chr1	6283418	T	C	0.00464	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	10519982	T	C	0.00572		.	FALSE	AluJr	SINE,Alu
chr1	32637063	C	T	0.00071	KPNA6	+	FALSE
chr3	73115126	A	T	0.00228	PPP4R2	+	FALSE
chr1	247350690	G	C	0.00364		.	FALSE	L1MA7	SINE,Alu
chr5	81571875	A	T	0.00072	RPS23	-	FALSE
chr17	40723650	A	T	0.00250	MLX	+	FALSE
chr15	41591457	A	G	1.25234E-05	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr1	6682037	G	A	0.00302	PHF13	+	FALSE
chr1	181058313	G	A	0.00651	IER5	+	FALSE
chr1	9324451	C	T	0.00266	H6PD	+	FALSE
chr1	36068369	T	C	0.00511	PSMB2	-	TRUE	AluSc	SINE,Alu
chr6	29912348	A	G	0.00429		.	FALSE
chr3	99516879	A	T	7.79377E-13	MIR548G	-	FALSE
chr7	100031511	C	T	0.00490	MEPCE	+	FALSE
chr1	10517950	G	C	0.00449		.	FALSE
chr8	48890293	A	G	0.00125	MCM4	+	TRUE	AluJb	SINE,Alu
chr1	46828657	C	T	0.00378	NSUN4	+	FALSE
chr1	184661932	A	G	0.00063	EDEM3	-	FALSE
chr3	141879810	T	C	0.00784	GK5	-	FALSE	AluJr	SINE,Alu
chr3	156259317	T	C	0.00189	SSR3	-	TRUE	AluSq2	SINE,Alu
chr3	176739404	A	G	7.21134E-06	TBL1XR1	-	FALSE
chr1	206566195	C	T	0.00334	SRGAP2	+	FALSE
chr1	6283439	T	C	0.00786	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	109818161	C	T	0.00864	CELSR2	+	FALSE
chr8	145159707	G	C	0.00158	MAF1	+	FALSE
chr14	53243438	T	C	7.89901E-12	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr1	10520045	T	C	0.00085		.	FALSE	AluSx	SINE,Alu
chr1	209605646	A	C	0.00478	MIR205HG	+	FALSE	(AGC)n	SINE,Alu
chr1	144599819	C	T	0.00682	NBPF20	+	FALSE
chr3	195243002	C	A	0.00358	PPP1R2	-	FALSE
chr1	160967843	T	C	0.00247	F11R	-	TRUE	AluSp	SINE,Alu
chr2	24522807	C	T	0.00079	ITSN2	-	FALSE
chr1	39794147	A	C	9.03176E-05	MACF1	+	FALSE
chr1	38174665	G	A	0.00339	CDCA8	+	FALSE
chr12	98942904	A	G	0.00259	TMPO	+	TRUE	AluSc	SINE,Alu
chr5	31553968	T	C	0.00555	C5orf22	+	FALSE
chr1	94351065	A	T	0.00142	GCLM	-	FALSE
chr2	69688852	T	C	0.00414	AAK1	-	TRUE	AluSq2	SINE,Alu
chr16	10624953	T	C	0.00056	EMP2	-	TRUE	AluSx3	SINE,Alu
chr9	33046889	T	A	0.00932	SMU1	-	FALSE	AluSz	SINE,Alu
chr1	28826150	A	G	0.00152	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	152187183	C	A	0.00373	HRNR	-	FALSE
chr19	51305797	T	C	0.00397	C19orf48	-	TRUE	AluSg	SINE,Alu
chr10	65380587	A	G	0.00344	REEP3	+	FALSE
chr7	65619242	A	G	0.00545	CRCP	+	TRUE	AluSz6	SINE,Alu
chr1	10519973	T	C	0.00745		.	FALSE	AluJr	SINE,Alu
chr16	10623544	T	C	2.29348E-06	EMP2	-	TRUE	AluSp	SINE,Alu
chr6	42854611	A	G	0.00541	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr1	19943823	C	A	0.00752	MINOS1,MINOS1-NBL1	+	FALSE
chr1	67874689	T	C	1.54545E-05	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr4	56294628	T	C	0.00234	CLOCK	-	FALSE
chr1	10043363	A	G	0.00429	NMNAT1	+	TRUE	AluSx3	SINE,Alu
chr1	92862896	A	G	6.86172E-05		.	FALSE	AluJr	SINE,Alu
chr3	42591956	G	A	0.00030	SEC22C	-	FALSE
chr1	153643449	G	C	0.00704	ILF2	-	FALSE

RBP	CPSF2
Knock-Method	siRNA
RBP Family	Beta-Casp
Biosample Name	Flip-in-293
Tissue Type	Kidney
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE60391
Platform	GPL11154
Pubmed ID	25921069

CPSF2 - Target Gene Network