RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	54563156	A	G	3.59804E-06	TCEANC2	+	FALSE
chr3	57612180	T	C	0.00018	DENND6A,PDE12	+,-	FALSE	AluSp	SINE,Alu
chr1	10518734	T	C	0.00249		.	FALSE	AluSx1	SINE,Alu
chr3	182637840	C	T	1.61172E-05	ATP11B	+	FALSE
chr4	17803616	T	C	1.55934E-06	DCAF16	-	TRUE	AluY	SINE,Alu
chr17	65334868	T	C	0.00096	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	16958063	C	T	0.00246		.	FALSE
chr5	70248477	T	A	0.00163	SMN1,SMN2	+	FALSE	L1MC5a	SINE,Alu
chr1	10521126	T	C	0.00560	DFFA	-	TRUE	AluY	SINE,Alu
chr1	9664845	C	T	1.14015E-08	TMEM201	+	FALSE
chr1	45975348	T	C	0.00062	MMACHC	+	FALSE	AluSg7	SINE,Alu
chr1	93826609	T	G	0.00073	DR1	+	FALSE
chr3	196079390	T	C	2.00948E-06		.	FALSE	AluSx	SINE,Alu
chr1	46076529	A	G	0.00336	NASP	+	TRUE	AluSx	SINE,Alu
chr17	79780692	T	C	0.00116	MCRIP1	-	TRUE
chr3	156259340	T	C	0.00070	SSR3	-	TRUE	AluSq2	SINE,Alu
chr3	11598816	C	A	0.00118	ATG7,VGLL4	+,-	FALSE
chr1	1594940	T	C	0.00115	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr2	101622888	T	A	7.56266E-05	RPL31	+	FALSE
chr1	6283306	T	C	0.00609	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	19232017	T	G	0.00519	IFFO2	-	FALSE
chrX	123046290	A	G	0.00524	XIAP	+	TRUE	AluJb	SINE,Alu
chr1	206579798	T	C	0.00883	SRGAP2	+	FALSE
chr8	30536606	T	C	9.30891E-05	GSR	-	TRUE	AluSp	SINE,Alu
chr1	154128838	G	T	0.00062	TPM3	-	FALSE
chr1	118167515	C	T	4.87028E-05	FAM46C	+	FALSE
chr1	85785548	C	T	0.00350	DDAH1	-	FALSE
chr12	124146569	A	G	0.00013	GTF2H3	+	TRUE	AluSq2	SINE,Alu
chr1	16933135	G	T	0.00363	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr12	98942904	A	G	0.00259	TMPO	+	TRUE	AluSc	SINE,Alu
chr8	146016990	C	T	0.00027	RPL8	-	FALSE
chr1	19234174	A	G	0.00046	IFFO2	-	FALSE
chr1	27992799	T	A	0.00014	IFI6	-	FALSE	FAM	SINE,Alu
chr1	226923264	G	A	0.00046	ITPKB	-	FALSE
chr2	27293351	C	T	0.00314	AGBL5,OST4	+,-	FALSE
chr1	154554947	T	G	0.00511	ADAR	-	FALSE
chr1	205737665	G	T	0.00078	RAB29	-	FALSE	AluSq2	SINE,Alu
chr1	10437811	A	G	0.00800	KIF1B	+	TRUE	AluSg	SINE,Alu
chr10	64911911	A	G	0.00908	NRBF2	+	FALSE
chr2	206983255	T	C	0.00246		.	FALSE	AluJb	SINE,Alu
chr2	37333924	T	C	0.00298	EIF2AK2	-	FALSE	AluSz	SINE,Alu
chr1	144930596	C	A	0.00578	NBPF20,PDE4DIP	+,-	FALSE
chr1	150704413	T	C	0.00236	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	20826781	C	T	0.00110	MUL1	-	FALSE
chr14	53109677	T	C	5.62031E-05	ERO1A	-	FALSE
chr14	70838369	T	C	0.00015	SYNJ2BP-COX16,SYNJ2BP	-	TRUE	AluSg	SINE,Alu
chr5	149363214	A	G	6.58903E-07	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr1	100150196	A	G	0.00176	PALMD	+	TRUE	AluJr	SINE,Alu
chr1	150281011	A	G	0.00016	MRPS21	+	TRUE	AluSz	SINE,Alu
chr16	10623571	T	C	0.00329	EMP2	-	TRUE	AluSp	SINE,Alu
chr12	133298121	A	G	1.85542E-11	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	47716046	A	T	0.00696	STIL	-	FALSE
chr12	93192790	G	T	0.00161	EEA1	-	FALSE
chr1	118066459	A	G	1.18472E-05	MAN1A2	+	FALSE
chr1	204526631	A	G	0.00568	MDM4	+	TRUE	AluSx	SINE,Alu
chr10	117823569	G	A	0.00391	GFRA1	-	FALSE	(ATC)n	SINE,Alu
chr1	154128831	G	T	0.00183	TPM3	-	FALSE
chr2	234183368	A	G	0.00369	ATG16L1	+	FALSE
chr1	949472	G	A	2.93477E-10	ISG15	+	FALSE
chr1	225611661	C	T	0.00113	LBR	-	FALSE
chr1	201975173	G	T	0.00356	RNPEP	+	FALSE
chr1	6282400	T	C	0.00321	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	45975498	A	G	0.00018	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	19586360	T	C	0.00023	MRTO4	+	FALSE
chr3	183890868	A	G	5.00274E-08	DVL3	+	FALSE	L2	SINE,Alu
chr1	118068699	C	G	0.00191		.	FALSE
chr9	140286415	T	C	0.00254	EXD3	-	FALSE	AluSg	SINE,Alu
chr1	20975992	T	C	2.78350E-06	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	26755494	A	G	0.00874	LIN28A	+	TRUE	AluSc	SINE,Alu
chr1	10517276	T	C	0.00039		.	FALSE	AluJr	SINE,Alu
chr1	87572817	C	T	0.00514	HS2ST1	+	FALSE
chr1	6582221	T	C	6.47537E-05	NOL9	-	TRUE	AluSq4	SINE,Alu
chr1	206566195	C	T	0.00334	SRGAP2	+	FALSE
chr1	38280611	G	T	0.00670	MTF1	-	FALSE	(T)n	SINE,Alu
chr6	42849616	A	G	0.00092	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr3	196078364	G	A	6.64958E-05		.	FALSE	GA-rich	SINE,Alu
chr14	105270480	T	G	0.00035	ZBTB42	+	FALSE
chr1	33148210	A	G	0.00778	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chrX	77083981	T	C	0.00647	MAGT1	-	TRUE	AluSz	SINE,Alu
chr12	125511958	A	G	0.00010	THRIL	-	FALSE	AluSx1	SINE,Alu
chr2	25042625	C	G	0.00766	CENPO,ADCY3	+,-	FALSE
chr1	40537922	A	G	0.00686	CAP1	+	FALSE	(A)n	SINE,Alu
chr3	110853822	G	T	0.00812	NECTIN3	+	FALSE
chr3	136667405	T	C	0.00190	NCK1	+	FALSE
chr1	118071289	A	G	0.00023		.	FALSE
chr2	201842492	T	C	0.00107	FAM126B	-	TRUE	AluJb	SINE,Alu
chr5	130538043	A	G	0.00713	LYRM7	+	TRUE	AluSp	SINE,Alu
chr3	183861750	A	C	1.09807E-05	EIF2B5	+	FALSE
chr3	10192753	A	G	0.00069	VHL	+	TRUE	AluSx1	SINE,Alu
chr4	17802890	T	C	0.00303	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	160967855	T	C	0.00042	F11R	-	TRUE	AluSp	SINE,Alu
chr2	201774209	T	C	0.00534		.	FALSE	AluSz	SINE,Alu
chr2	128603088	T	C	0.00141		.	FALSE	AluSp	SINE,Alu
chr2	176792357	A	G	7.02808E-05	LNPK	-	FALSE
chr1	110201699	T	C	0.00513	GSTM4	+	FALSE
chr1	109780743	C	A	0.00643	SARS	+	FALSE
chr5	70248476	T	G	0.00273	SMN1,SMN2	+	FALSE	L1MC5a	SINE,Alu
chr2	62095534	T	C	0.00021	CCT4	-	FALSE
chr13	99056476	A	T	0.00535	FARP1	+	FALSE
chr7	100031495	C	T	0.00475	MEPCE	+	FALSE
chr3	183890097	G	A	1.43668E-06	DVL3	+	FALSE
chr7	152342999	T	C	0.00313		.	FALSE	FRAM	SINE,Alu
chr5	44818826	G	A	0.00595		.	FALSE
chr1	201488143	A	G	0.00492		.	FALSE	AluSz	SINE,Alu
chr2	8823958	G	A	0.00017	ID2	+	FALSE
chr2	128063697	G	A	0.00775	MAP3K2	-	FALSE
chr21	44331206	A	G	0.00167		.	FALSE	AluSz	SINE,Alu
chr15	40462780	G	A	0.00251	BUB1B	+	FALSE
chr15	41573612	C	A	0.00355	CHP1	+	FALSE
chr1	67874697	T	C	0.00010	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr4	56298300	G	A	7.51019E-06	CLOCK	-	FALSE
chr5	134061340	T	A	0.00493	SEC24A	+	FALSE
chr11	124954212	C	A	0.00827	SLC37A2	+	FALSE
chr1	212587320	T	C	0.00023	TMEM206	-	FALSE
chr3	88101339	T	C	0.00531	CGGBP1	-	FALSE
chr1	19586294	A	G	0.00048	MRTO4	+	FALSE
chr1	36068196	T	C	0.00376	PSMB2	-	TRUE	AluSc	SINE,Alu
chr12	133298349	A	G	0.00000	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	115313039	A	G	0.00895	SIKE1	-	FALSE
chr3	195415529	C	T	0.00819	LINC00969,SDHAP2	+	FALSE	L1ME2	SINE,Alu
chr1	16889864	C	A	6.58858E-05	NBPF1	-	FALSE
chr1	146650916	C	T	0.00025	PDIA3P1	+	FALSE
chr1	54692674	A	G	0.00864	SSBP3	-	FALSE
chr1	179832838	A	G	0.00018	TOR1AIP2	-	FALSE	MLT1L	SINE,Alu
chr1	28607959	C	A	0.00230	SESN2	+	FALSE
chr3	180694862	C	T	0.00638	FXR1	+	FALSE	(T)n	SINE,Alu
chr1	6704652	C	T	0.00000	DNAJC11	-	FALSE
chr1	32833540	T	C	0.00381	BSDC1	-	TRUE
chr1	144601045	C	T	0.00623	NBPF20	+	FALSE	L1MC2	SINE,Alu
chr1	35650162	C	A	0.00106	SFPQ	-	FALSE
chr1	11298093	C	T	7.93954E-12	MTOR	-	FALSE
chr1	142449	G	A	0.00073		.	FALSE	MIRb	SINE,Alu
chr1	145368837	C	A	4.93702E-07	NBPF20,NBPF10	+	FALSE
chr2	47562582	G	A	0.00484	LOC101927043	-	FALSE	BC200	SINE,Alu
chr2	178086785	C	A	0.00808	HNRNPA3	+	FALSE
chr4	17804785	T	C	0.00273	DCAF16	-	TRUE	AluSx	SINE,Alu
chr5	109202858	G	A	0.00054	MAN2A1	+	FALSE	(A)n	SINE,Alu
chr1	6583270	C	G	0.00026	NOL9	-	FALSE
chr1	119693495	A	G	0.00996	LOC101929147	+	TRUE	AluSx	SINE,Alu
chr1	33409693	G	A	0.00722	RNF19B	-	FALSE
chr6	34231288	A	G	0.00143		.	FALSE
chr1	20976174	T	C	0.00103	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	10519148	T	C	0.00214		.	FALSE	AluSx3	SINE,Alu
chr1	32799439	C	T	0.00239	MARCKSL1	-	FALSE
chr19	46053370	T	C	0.00045	OPA3	-	TRUE	AluSx1	SINE,Alu
chr12	1611799	A	G	0.00156	LINC00942	+	FALSE
chr3	196670098	T	C	0.00019	NCBP2-AS2	+	FALSE
chr4	17845943	C	G	0.00000	NCAPG,LCORL	+,-	FALSE
chr1	6257826	T	C	0.00560	RPL22	-	FALSE
chr2	206987632	T	C	0.00671		.	FALSE	AluJb	SINE,Alu
chr2	128601464	T	C	0.00161		.	FALSE	AluJr	SINE,Alu
chr3	101542436	A	G	0.00023	NXPE3	+	TRUE	AluJr	SINE,Alu
chr4	39552175	T	C	0.00010	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	10521254	T	C	0.00684	DFFA	-	TRUE	AluY	SINE,Alu
chr2	26617209	A	G	5.06124E-05	EPT1	+	FALSE	AluSz	SINE,Alu
chr3	57913810	G	A	0.00477	SLMAP	+	FALSE
chr2	114352179	G	A	1.68965E-05	WASH2P	+	FALSE
chr7	44839297	A	T	0.00777	PPIA	+	FALSE
chr12	133298417	A	G	6.66134E-16	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	10521126	T	C	0.00599	DFFA	-	TRUE	AluY	SINE,Alu
chr1	16927369	C	T	0.00943	NBPF1	-	FALSE
chr7	120740103	G	T	0.00601	CPED1	+	FALSE
chr1	115249843	G	A	0.00218	NRAS	-	FALSE
chr3	48787640	T	C	0.00320	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr6	32800221	C	T	0.00900		.	FALSE	(GCATCA)n	SINE,Alu
chr1	10517313	T	C	0.00015		.	FALSE	AluJr	SINE,Alu
chr1	32661615	A	T	0.00033	TXLNA	+	FALSE
chr1	6282400	T	C	0.00118	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	6583097	T	C	0.00022	NOL9	-	TRUE	AluSx4	SINE,Alu
chr2	86249930	T	C	6.06022E-05	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	10517653	T	C	0.00792		.	FALSE	AluSx1	SINE,Alu
chr1	161338504	C	G	0.00343		.	FALSE
chr1	109475572	A	G	0.00096	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr6	150045852	T	C	0.00204	NUP43	-	TRUE	AluSq	SINE,Alu
chr1	10519888	T	C	0.00666		.	FALSE	AluJr	SINE,Alu
chr1	6282420	T	C	0.00133	ICMT	-	TRUE	AluSz	SINE,Alu
chr10	104417853	T	A	0.00393	TRIM8	+	FALSE	(AAT)n	SINE,Alu
chr19	42376692	A	G	0.00540		.	FALSE	AluSp	SINE,Alu
chr2	24494671	T	C	0.00244	ITSN2	-	FALSE	(TATCCT)n	SINE,Alu
chr12	53936878	G	T	0.00036	ATF7	-	FALSE
chr17	37006249	T	C	0.00774		.	FALSE	AluSx	SINE,Alu
chr1	32697109	A	G	0.00015	EIF3I	+	FALSE	AluSp	SINE,Alu
chr3	73112378	A	G	0.00261	PPP4R2,EBLN2	+	FALSE
chr2	97020049	T	C	0.00070	NCAPH	+	FALSE
chr1	10520130	T	C	0.00355		.	FALSE	AluSx	SINE,Alu
chr2	206986972	T	C	0.00462		.	FALSE	AluJr	SINE,Alu
chr1	16945504	C	T	0.00665	CROCCP2	-	FALSE
chr1	220231338	T	C	0.00762	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr3	39449137	T	C	0.00000	RPSA	+	FALSE
chr2	9629298	G	C	0.00590	ADAM17	-	FALSE	(TGT)n	SINE,Alu
chr1	204525666	A	G	0.00093	MDM4	+	TRUE	AluSz	SINE,Alu
chr7	128829066	A	G	0.00816	SMO	+	FALSE
chr5	79923293	T	C	0.00039	DHFR	-	TRUE	AluJr	SINE,Alu
chr17	57281069	A	G	0.00278	PRR11	+	TRUE	AluSz	SINE,Alu
chr15	63356574	G	A	0.00845	TPM1	+	FALSE
chr1	45976723	T	C	0.00733	MMACHC,PRDX1	+,-	FALSE
chr5	41919747	C	T	0.00814	C5orf51	+	FALSE	L2c	SINE,Alu
chr15	102512797	A	G	0.00080	WASH3P	+	FALSE
chr1	36770045	T	C	0.00488	THRAP3	+	FALSE
chr1	6282401	T	C	1.82955E-05	ICMT	-	TRUE	AluSz	SINE,Alu
chr3	73115126	A	T	0.00228	PPP4R2	+	FALSE
chr2	172178680	T	C	9.91686E-05	METTL8	-	TRUE	AluSx3	SINE,Alu
chr11	8707394	T	A	4.23595E-06	RPL27A	+	FALSE
chr1	28661665	A	G	0.00808	MED18	+	TRUE	AluSg	SINE,Alu
chr3	14526625	T	G	0.00414	SLC6A6	+	FALSE
chr16	88785189	T	C	0.00636	PIEZO1	-	TRUE	AluJr	SINE,Alu
chr1	179326418	A	G	0.00626	SOAT1	+	TRUE	AluSg	SINE,Alu
chr1	28826118	A	G	0.00948	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr6	43738977	C	T	0.00088	VEGFA	+	FALSE
chr1	44423703	C	T	1.17684E-14	IPO13	+	FALSE
chr1	142805281	C	T	0.00242		.	FALSE
chr1	26774224	A	G	0.00100	DHDDS	+	TRUE	AluSz6	SINE,Alu
chr1	89447868	G	T	0.00236	KYAT3,RBMXL1	-	FALSE
chr1	16812082	A	G	0.00545	CROCCP3	-	FALSE
chr17	5288077	G	C	0.00066	RABEP1	+	FALSE
chr4	66439443	T	C	0.00593	EPHA5	-	FALSE
chr1	16890598	T	A	0.00428	NBPF1	-	FALSE
chr6	32147696	G	A	6.22517E-06		.	FALSE
chr2	224844864	A	G	7.12020E-05	SERPINE2	-	FALSE	L2b	SINE,Alu
chr2	24227417	A	G	0.00514		.	FALSE	AluSc	SINE,Alu
chr6	13790822	T	C	0.00885	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr4	6644273	C	G	0.00000	MRFAP1	+	FALSE
chr2	17897488	T	C	0.00430	SMC6	-	FALSE
chr2	55516902	G	A	0.00011	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr19	57818376	A	G	0.00031		.	FALSE	AluJr	SINE,Alu
chr14	90509564	C	T	0.00552	TDP1	+	FALSE
chr2	3592638	T	C	0.00941	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr1	160966352	T	C	1.19601E-07	F11R	-	TRUE	AluSg	SINE,Alu
chr6	16305357	C	T	0.00559	ATXN1	-	FALSE
chr3	17201882	C	T	0.00259	TBC1D5	-	FALSE
chr1	40539203	A	T	0.00179	PPT1	-	FALSE
chr4	39551976	T	C	0.00041	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr3	193854148	T	A	0.00106	HES1	+	FALSE
chr4	39551008	T	C	0.00017	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	10517952	C	A	0.00341		.	FALSE
chr1	120163007	G	A	0.00573	ZNF697	-	FALSE
chr1	46159809	T	A	0.00761	TMEM69	+	FALSE
chr1	6282401	T	C	0.00469	ICMT	-	TRUE	AluSz	SINE,Alu
chr2	85775237	T	C	6.42894E-05	GGCX	-	TRUE	AluSx4	SINE,Alu
chr1	179042905	A	G	0.00972	FAM20B	+	TRUE
chr1	95362514	G	T	7.06346E-05	CNN3	-	FALSE
chr1	1721936	G	A	0.00731	GNB1	-	FALSE
chr6	13790964	T	C	5.10728E-05	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr20	25428294	A	G	1.11452E-05	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	179044242	A	G	0.00335	FAM20B	+	TRUE	AluSx	SINE,Alu
chr4	120979187	T	C	0.00046		.	FALSE	AluSg4	SINE,Alu
chr1	16932429	C	G	0.00221	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr7	2290637	C	T	0.00956	NUDT1	+	FALSE
chr1	74665493	G	A	0.00128	FPGT-TNNI3K,FPGT	+	FALSE
chr2	38522138	G	T	0.00769	ATL2	-	FALSE
chr6	44417182	A	G	0.00018	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	145694022	A	G	0.00708	NBPF20,NBPF10	+	TRUE	AluSz	SINE,Alu
chr9	86584220	G	A	0.00318	HNRNPK	-	FALSE
chr11	65404866	T	G	0.00664	PCNX3	+	FALSE	(T)n	SINE,Alu
chr1	19543247	T	C	0.00813	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	25962253	A	T	0.00784	ASXL2	-	FALSE
chr2	201774342	T	C	0.00127		.	FALSE	AluSz	SINE,Alu
chr2	109401259	C	T	0.00889	RANBP2	+	FALSE
chr1	13942885	C	A	0.00038	PDPN	+	FALSE
chr1	53291344	A	G	0.00088	ZYG11B	+	FALSE	(A)n	SINE,Alu
chr1	144852203	T	G	0.00029	NBPF20,PDE4DIP	+,-	FALSE
chr12	69237077	A	G	0.00445	MDM2	+	TRUE	(GA)n	SINE,Alu
chr1	33148096	A	G	0.00404	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr5	79922263	T	G	0.00913	DHFR	-	FALSE	HAL1	SINE,Alu
chr1	145512166	T	A	0.00736	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr5	149829075	A	G	0.00277	RPS14	-	FALSE
chr4	4291825	C	T	1.35815E-09	LYAR	-	FALSE
chr1	79125148	G	A	0.00203	IFI44	+	FALSE
chr1	19566382	A	G	0.00513	LOC101927895,EMC1	+,-	FALSE
chr5	37291504	T	C	0.00878		.	FALSE	AluSx3	SINE,Alu
chr1	87811070	G	A	0.00396	LMO4	+	FALSE
chr3	98516118	T	A	0.00541	DCBLD2	-	FALSE
chr1	566678	C	T	0.00559		.	FALSE
chr3	149237753	G	A	2.17555E-05	WWTR1	-	FALSE	AluSq2	SINE,Alu
chr1	10521238	T	C	0.00597	DFFA	-	TRUE	AluY	SINE,Alu
chr8	6263057	A	C	0.00419	LOC100287015	-	FALSE
chr1	226259443	C	A	0.00927	H3F3AP4,H3F3A	+	FALSE
chr19	9673276	C	A	0.00085		.	FALSE	Tigger1	SINE,Alu
chr3	156258389	T	C	0.00179	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	36068210	T	C	0.00025	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	37331207	T	C	0.00745		.	FALSE	AluSx1	SINE,Alu
chr5	130729522	T	G	0.00506	CDC42SE2	+	FALSE	(T)n	SINE,Alu
chr4	7761114	G	A	8.00249E-13	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	11084104	G	A	0.00116	TARDBP	+	FALSE
chr19	42375627	A	G	0.00463		.	FALSE	AluSx	SINE,Alu
chr1	144931727	G	A	0.00521	NBPF20,PDE4DIP	+,-	FALSE
chr2	102508658	T	A	0.00275	MAP4K4	+	FALSE
chr3	49051841	C	A	0.00132	WDR6	+	FALSE
chr3	27674782	A	G	0.00630		.	FALSE
chr1	9294903	C	G	0.00353	H6PD	+	FALSE
chr1	59120961	G	A	9.55369E-05	MYSM1	-	FALSE
chr19	45406538	C	G	0.00119	TOMM40	+	FALSE
chrX	2824894	T	C	0.00770	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	19543799	T	C	0.00076	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	74672640	T	A	0.00011	FPGT-TNNI3K,FPGT	+	FALSE
chr1	200521412	G	A	0.00588	KIF14	-	FALSE
chr1	205686520	A	G	0.00980	NUCKS1	-	FALSE
chr5	130537761	A	G	0.00126	LYRM7	+	FALSE	AluJb	SINE,Alu
chr9	21863618	T	C	0.00148	MTAP	+	FALSE	AluY	SINE,Alu
chr12	104186946	G	T	0.00523	NT5DC3	-	FALSE
chr3	15114399	T	C	0.00848	RBSN	-	TRUE	AluY	SINE,Alu
chr2	204055625	G	A	0.00426	NBEAL1	+	FALSE
chr1	118472401	C	T	0.00396	WDR3	+	FALSE
chr1	67874697	T	C	0.00119	SERBP1	-	TRUE	AluSx3	SINE,Alu
chrX	77083548	T	C	0.00205	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr4	17802955	T	C	0.00071	DCAF16	-	FALSE	AluSz	SINE,Alu
chr5	93018903	T	A	5.97109E-08	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr9	14921850	A	G	0.00112		.	FALSE
chr3	53220215	G	A	2.78975E-05	PRKCD	+	FALSE
chr2	37328013	T	C	0.00364		.	FALSE
chr7	44841589	A	G	0.00469	PPIA	+	TRUE	AluJr	SINE,Alu
chr7	65619292	A	G	0.00189	CRCP	+	TRUE	AluSz6	SINE,Alu
chr2	28636644	A	G	0.00918	FOSL2	+	FALSE
chr1	32638906	C	T	5.73102E-10	KPNA6	+	FALSE
chr17	5288078	A	G	0.00081	RABEP1	+	FALSE
chr1	86852362	C	A	0.00073	ODF2L	-	FALSE	AluSz	SINE,Alu
chr5	137354051	C	T	0.00098	FAM13B	-	FALSE
chr1	46076529	A	G	0.00196	NASP	+	TRUE	AluSx	SINE,Alu
chr14	75202553	A	G	0.00014	FCF1	+	TRUE	AluSc	SINE,Alu
chr12	120898554	A	G	0.00124	GATC	+	TRUE	AluY	SINE,Alu
chr2	38971635	C	G	0.00011	SRSF7	-	FALSE
chr12	98943182	A	G	1.41026E-08	TMPO	+	TRUE	AluSz	SINE,Alu
chr2	99772813	A	G	1.48642E-06	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr1	1251844	T	C	0.00731	CPSF3L	-	TRUE	AluSq2	SINE,Alu
chr1	3545189	T	G	0.00027	TPRG1L	+	FALSE
chr20	45839076	A	T	0.00178	ZMYND8	-	FALSE	(T)n	SINE,Alu
chr1	63881552	C	T	0.00293	ALG6	+	FALSE
chr1	166820104	G	A	0.00477	POGK	+	FALSE	MER1B	SINE,Alu
chr1	203277244	A	G	0.00115	BTG2	+	FALSE
chr1	6283264	T	C	0.00073	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	230979247	G	A	0.00137	C1orf198	-	FALSE
chr1	109818158	C	T	0.00628	CELSR2	+	FALSE
chr1	92975244	T	A	0.00220	EVI5	-	FALSE
chr14	69708241	G	A	0.00748	EXD2	+	FALSE
chr12	32532505	G	A	0.00385		.	FALSE
chr1	180247483	T	C	0.00167		.	FALSE
chr6	37142192	C	T	0.00850	PIM1	+	FALSE
chr1	38327542	T	C	0.00068	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr2	37331525	T	C	0.00091		.	FALSE	AluJb	SINE,Alu
chr1	144931581	C	G	0.00292	NBPF20,PDE4DIP	+,-	FALSE
chr1	114443475	A	G	0.00538	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr4	1205668	C	A	0.00132	CTBP1-AS,CTBP1	+,-	FALSE	(A)n	SINE,Alu
chr1	118066459	A	G	0.00360	MAN1A2	+	FALSE
chr2	71411977	T	A	0.00468	PAIP2B	-	FALSE
chr4	17803748	T	A	0.00859	DCAF16	-	FALSE
chr1	111489899	C	A	0.00041	LRIF1	-	FALSE
chr3	179117266	T	C	0.00111	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	145689533	A	G	0.00618	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	155429590	G	T	0.00356	ASH1L	-	FALSE
chr3	5258985	T	C	1.48069E-09	EDEM1	+	FALSE
chr1	120163248	G	A	4.97770E-06	ZNF697	-	FALSE
chr1	16893686	G	C	0.00171	NBPF1	-	FALSE
chr1	85488830	T	C	0.00137	MCOLN3	-	TRUE	AluJr	SINE,Alu
chr1	9325676	C	T	9.85088E-06	H6PD	+	FALSE
chr2	70316226	A	C	0.00426	PCBP1	+	FALSE
chr1	227847344	T	C	0.00205	ZNF678	+	FALSE
chr1	33145959	T	G	0.00755	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chr19	50410816	G	T	0.00050	IL4I1,NUP62	-	FALSE	AluSz	SINE,Alu
chr1	145512078	A	G	0.00907	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	160791358	C	T	0.00018	PPM1L	+	FALSE
chr2	113962806	A	G	0.00309		.	FALSE	AluSz	SINE,Alu
chr3	197612370	A	G	0.00157		.	FALSE	AluSp	SINE,Alu
chr12	98943103	A	G	0.00528	TMPO	+	TRUE	AluSz	SINE,Alu
chr2	232319611	A	T	3.84700E-07	NCL	-	FALSE
chr1	144833386	A	G	0.00325	NBPF20	+	FALSE	L1MEc	SINE,Alu
chr1	145688664	A	T	0.00087	NBPF20,NBPF10,RNF115	+	FALSE
chr1	19810692	A	C	0.00069	CAPZB	-	FALSE
chr1	150281090	A	G	3.10555E-05	MRPS21	+	TRUE	AluSz	SINE,Alu
chr10	75009651	T	C	0.00558	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr1	28261657	C	T	0.00327	SMPDL3B	+	FALSE
chr1	1152309	A	T	0.00035	SDF4	-	FALSE
chr1	78483452	C	T	0.00094	DNAJB4	+	FALSE	L1MB7	SINE,Alu
chr1	2113565	T	G	0.00429	PRKCZ	+	FALSE
chr1	31342611	A	C	0.00145	SDC3	-	FALSE
chr1	78342729	A	G	0.00175	MIGA1	+	TRUE	FRAM	SINE,Alu
chr20	25427801	A	G	0.00300	GINS1	+	TRUE	AluSz	SINE,Alu
chr14	53242674	T	C	1.74446E-05	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr1	17292223	G	A	0.00351	CROCC	+	FALSE	Penelope1_Vert	SINE,Alu
chr1	92195511	C	T	0.00681	TGFBR3	-	FALSE
chr1	145500920	T	A	0.00286	NBPF20,NBPF10,LIX1L	+	FALSE
chr2	55459824	C	T	0.00786	RPS27A	+	FALSE
chr6	42856959	A	G	6.63353E-07	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	165877575	A	C	0.00675	UCK2	+	FALSE
chr3	14986111	T	C	0.00000	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr7	38765149	C	T	0.00785	VPS41	-	FALSE
chr1	28662105	A	G	0.00846	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	9160975	T	C	0.00858		.	FALSE	AluJb	SINE,Alu
chr1	32384710	G	A	0.00299	PTP4A2	-	FALSE
chr1	58999651	T	G	0.00980	OMA1	-	FALSE
chr3	48787118	T	C	0.00359	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	1252248	A	G	0.00938	CPSF3L	-	FALSE	AluSx	SINE,Alu
chr1	54692341	T	C	0.00045	SSBP3	-	FALSE	(T)n	SINE,Alu
chr1	220231254	T	C	0.00974	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	16891340	T	A	0.00440	NBPF1	-	FALSE
chr1	20976163	C	T	1.02809E-07	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	16933753	G	A	0.00609	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	145509570	A	G	0.00028	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	1595540	T	C	0.00830	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr2	37330391	T	C	0.00134		.	FALSE	AluSq2	SINE,Alu
chr2	3592638	T	C	0.00164	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr14	23441536	G	A	0.00793	AJUBA	-	FALSE	GA-rich	SINE,Alu
chr1	175161849	G	T	0.00030	KIAA0040	-	FALSE
chr2	98409998	G	T	0.00261	TMEM131	-	FALSE
chr1	242012149	C	T	0.00334	EXO1	+	FALSE
chr4	39551167	T	C	0.00361	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	148251009	T	C	0.00065	NBPF8,NBPF14,NBPF9	-	TRUE
chr1	1255401	G	T	0.00216	CPSF3L	-	FALSE	(GCAGG)n	SINE,Alu
chr15	74210428	G	A	0.00784	LOXL1-AS1	-	FALSE	L2a	SINE,Alu
chr3	10192720	A	G	0.00110	VHL	+	TRUE	AluSx1	SINE,Alu
chr4	17803009	T	C	0.00062	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	16932968	G	A	0.00074	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr3	99463810	G	T	0.00496	MIR548G,COL8A1	+,-	FALSE
chr2	37327685	T	C	0.00057		.	FALSE
chr1	6282255	T	C	0.00954	ICMT	-	TRUE	AluSz	SINE,Alu
chr2	91847976	C	T	0.00010		.	FALSE	TAR1	SINE,Alu
chr11	67795299	G	A	0.00764	ALDH3B1	+	FALSE
chr1	20826786	T	A	0.00030	MUL1	-	FALSE
chr1	184762524	T	C	0.00260	FAM129A	-	TRUE	AluSz	SINE,Alu
chr4	2516791	T	G	4.75740E-05	RNF4	+	FALSE
chr1	33149502	A	G	0.00045	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr4	25253995	C	T	9.95051E-10	PI4K2B	+	FALSE
chr1	151092875	A	G	0.00154	GABPB2	+	TRUE	AluSp	SINE,Alu
chr1	77759578	A	G	0.00404	AK5	+	FALSE
chr1	148003749	T	C	0.00517	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr3	45153708	G	A	4.36430E-08	CDCP1	-	FALSE
chr1	16893841	C	T	0.00272	NBPF1	-	FALSE
chr1	145116147	T	A	0.00031	NBPF20,SEC22B	+	FALSE
chr1	145512166	T	A	0.00823	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr11	6703160	A	T	0.00111	MRPL17	-	FALSE
chr8	143413136	C	T	0.00267	TSNARE1	-	FALSE
chr1	120497841	T	C	0.00673	NOTCH2	-	FALSE
chr15	38645589	A	C	0.00445	SPRED1	+	FALSE
chr5	175811091	G	A	0.00592	NOP16	-	FALSE
chr2	121979980	G	A	0.00525	TFCP2L1	-	FALSE	L1MB8	SINE,Alu
chr1	6282324	T	C	0.00142	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	10518688	T	C	0.00154		.	FALSE	AluSx1	SINE,Alu
chr1	10519936	T	C	0.00354		.	FALSE	AluJr	SINE,Alu
chr20	25428724	A	G	0.00033	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	6583066	T	C	0.00180	NOL9	-	TRUE	AluSx4	SINE,Alu
chr2	9629953	C	A	0.00105	ADAM17	-	FALSE
chr1	6477671	G	T	0.00620	HES2	-	FALSE	AluSx	SINE,Alu
chr2	17962998	T	A	0.01000	GEN1	+	FALSE
chr2	191556849	A	T	0.00158	NAB1	+	FALSE
chr8	98736864	T	A	0.00086	MTDH	+	FALSE
chr1	144615138	T	G	0.00196	NBPF20,NBPF9	+	FALSE
chr22	42908563	C	T	0.00492	SERHL,RRP7A	+,-	FALSE
chr1	25570692	C	T	0.00095	RSRP1	-	FALSE
chr1	114515717	G	A	0.00018	HIPK1	+	FALSE
chr1	114307293	A	G	0.00499	RSBN1	-	FALSE
chr1	94351063	A	T	0.00907	GCLM	-	FALSE
chr3	57613144	T	C	0.00959	DENND6A,PDE12	+,-	FALSE	AluSz	SINE,Alu
chr1	121133733	G	A	0.00455	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr3	196662641	T	C	0.00089	NCBP2	-	FALSE
chr1	145273431	A	G	7.55666E-05	NBPF20,NOTCH2NL	+	FALSE
chr5	125961648	A	G	0.00031	PHAX	+	FALSE	AluSz6	SINE,Alu
chr16	10625102	T	C	0.00129	EMP2	-	TRUE	AluSx3	SINE,Alu
chr16	10623705	T	C	0.00011	EMP2	-	TRUE	AluSp	SINE,Alu
chr2	37429627	A	G	0.00027	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr1	44088556	C	A	0.00260	PTPRF	+	FALSE	A-rich	SINE,Alu
chr1	36067760	T	C	0.00768	PSMB2	-	TRUE	AluSz	SINE,Alu
chr10	60047612	A	G	0.00015	CISD1	+	FALSE	(A)n	SINE,Alu
chr1	165877720	A	T	9.21169E-05	UCK2	+	FALSE
chr1	16932429	C	G	0.00076	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr19	23542157	T	C	0.00140	ZNF91	-	TRUE	AluY	SINE,Alu
chr3	58308214	G	A	0.00113		.	FALSE	LTR49	SINE,Alu
chr1	116235186	A	G	0.00054	VANGL1	+	FALSE
chr1	16973198	G	A	0.00514	MST1P2	+	FALSE
chr1	6282295	T	C	0.00060	ICMT	-	TRUE	AluSz	SINE,Alu
chr8	145139727	C	T	0.00458	GPAA1	+	FALSE
chr1	10520819	T	C	0.00034	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	113672640	A	G	0.00629		.	FALSE	AluJb	SINE,Alu
chr1	58999651	T	G	0.00484	OMA1	-	FALSE
chr1	145369589	T	C	0.00696	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	68168152	C	T	0.00258	GNG12	-	FALSE
chr2	32235359	A	C	0.00664	MEMO1	-	FALSE
chr20	57603729	A	T	0.00444		.	FALSE
chr3	172115902	G	A	9.15134E-06	FNDC3B	+	FALSE
chr5	70503889	C	A	0.00131		.	FALSE
chr1	53289852	A	G	0.00020	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	184675814	G	A	0.00048	EDEM3	-	FALSE
chr1	20976163	C	T	0.00091	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr14	75202512	A	G	0.00053	FCF1	+	TRUE	AluSc	SINE,Alu
chr11	65065251	A	G	0.00580	POLA2	+	TRUE	AluY	SINE,Alu
chr17	909317	G	A	0.00766	ABR	-	FALSE
chr3	44790773	T	C	0.00122	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	19585553	A	G	0.00039	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr3	45721874	A	G	0.00314	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr19	21474857	T	C	0.00131	ZNF708	-	TRUE	AluSc	SINE,Alu
chr4	6644391	G	A	0.00000	MRFAP1	+	FALSE
chr1	9642827	G	A	0.00521	SLC25A33	+	FALSE
chr1	144521099	A	G	0.00196	NBPF20	+	FALSE
chr1	59004766	G	T	0.00213	OMA1	-	FALSE
chr1	10520178	T	C	2.78615E-06		.	FALSE	AluSx	SINE,Alu

RBP	MSL3
Knock-Method	shRNA
RBP Family	Tudor-knot
Biosample Name	CH1
Tissue Type	Ovary
Biosample Type	Cell line
# of Control	3
# of Treat	3
Species	Human
Data Source	GEO
Profile ID	GSE117480
Platform	GPL16791
Pubmed ID	N.A.

MSL3 - Target Gene Network