RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	28835937	A	G	2.00244E-07	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr9	89627063	A	G	0.00614	LOC440173	-	FALSE
chr1	44423703	C	T	1.21014E-14	IPO13	+	FALSE
chr1	118066459	A	G	0.00496	MAN1A2	+	FALSE
chr3	156259295	T	C	0.00039	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	148003730	T	C	0.00636	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr2	234775941	A	G	0.00161	MSL3P1	-	FALSE
chr1	3546128	A	G	0.00213	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr1	39951484	C	A	0.00592	MACF1	+	FALSE
chr1	143189076	G	A	0.00048	LOC102723769	-	FALSE
chr1	10520672	T	C	0.00584	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	148003749	T	C	0.00114	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr16	10623544	T	C	2.29348E-06	EMP2	-	TRUE	AluSp	SINE,Alu
chr17	45761102	T	G	0.00296		.	FALSE
chr3	183534170	C	T	0.00090	MAP6D1	-	FALSE
chr1	117530477	G	A	0.00223	PTGFRN	+	FALSE
chr14	50053315	G	A	0.00150		.	FALSE	7SLRNA	SINE,Alu
chr1	949608	G	A	0.00435	ISG15	+	FALSE
chr2	37329369	T	C	0.00010		.	FALSE	AluJr4	SINE,Alu
chr3	53265957	T	C	0.00493	TKT	-	FALSE
chr1	1650797	A	G	0.00798	CDK11B,CDK11A	-	FALSE
chr1	6165419	C	T	0.00883	CHD5	-	FALSE
chr1	173457945	G	A	0.00287	PRDX6	+	FALSE
chr1	113673737	A	G	0.00798		.	FALSE	AluSx1	SINE,Alu
chr19	198079	T	C	0.00933	LINC01002	-	FALSE
chr8	128752685	G	A	2.94991E-09	MYC	+	FALSE
chr3	196670087	G	A	4.07177E-06	NCBP2-AS2	+	FALSE
chr17	57281034	A	G	0.00111	PRR11	+	TRUE	AluSz	SINE,Alu
chr3	44790781	T	C	0.00887	KIAA1143	-	TRUE	AluY	SINE,Alu
chr16	28296456	T	C	0.00772		.	FALSE	AluJb	SINE,Alu
chr1	39470995	A	C	0.00036	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr1	46660295	T	C	0.00871	POMGNT1	-	FALSE
chr17	5288079	A	C	0.00085	RABEP1	+	FALSE
chr5	74072648	T	A	0.00036	NSA2	+	FALSE
chr11	74551853	A	C	0.00079	RNF169	+	FALSE
chr1	6283332	T	C	6.58989E-06	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	1246978	A	T	0.00760	PUSL1,CPSF3L	+,-	FALSE
chr1	204525548	A	G	0.00027	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	9910358	T	C	0.00083	CTNNBIP1	-	FALSE
chr8	143739435	C	T	7.32829E-06	JRK	-	FALSE
chr3	196670094	G	C	0.00017	NCBP2-AS2	+	FALSE
chr19	49121788	T	C	0.00017	RPL18	-	FALSE
chr3	15114385	T	C	0.00146	RBSN	-	TRUE	AluY	SINE,Alu
chr1	1647871	T	C	7.46571E-06	CDK11B,CDK11A	-	FALSE
chr3	155658362	C	T	0.00807		.	FALSE	MIR3	SINE,Alu
chr17	42113064	A	G	0.00014	LSM12	-	FALSE	(A)n	SINE,Alu
chr1	200521297	C	T	0.00133	KIF14	-	FALSE	(T)n	SINE,Alu
chr11	63724398	T	C	0.00664	NAA40	+	FALSE	AluSx	SINE,Alu
chr1	19542693	T	C	0.00024	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr1	183218870	G	T	0.00338	NMNAT2	-	FALSE
chr6	3114457	C	T	0.00320	RIPK1	+	FALSE
chr2	24223353	A	G	0.00083	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr17	74710572	T	C	0.00594	JMJD6	-	FALSE
chrX	106184603	A	T	0.00717	MORC4	-	FALSE	(GA)n	SINE,Alu
chr1	155030557	A	C	0.00883	LOC100505666,ADAM15	+,-	FALSE
chr1	10521130	T	C	1.15946E-05	DFFA	-	TRUE	AluY	SINE,Alu
chr1	569874	C	T	0.00072		.	FALSE
chr19	42753034	A	G	0.00883	ERF	-	FALSE
chr1	168218522	A	G	9.71811E-05		.	FALSE	AluSz	SINE,Alu
chr1	59120961	G	A	9.55369E-05	MYSM1	-	FALSE
chr7	94060360	T	G	0.00014	COL1A2	+	FALSE
chr14	74526975	T	C	0.00024	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr21	40567667	A	G	0.00658	BRWD1	-	FALSE
chr1	85785549	T	C	0.00621	DDAH1	-	FALSE
chr11	28134974	C	A	0.00479	METTL15	+	FALSE
chr1	28825465	A	G	0.00756	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	10521238	T	C	0.00173	DFFA	-	TRUE	AluY	SINE,Alu
chr1	11083395	C	T	0.00616	TARDBP	+	FALSE
chr8	41399648	A	G	0.00037	LOC102723729,GINS4	+,-	FALSE	AluSx3	SINE,Alu
chr8	26435508	C	T	0.00106	DPYSL2	+	FALSE	(TC)n	SINE,Alu
chr7	6501820	A	T	0.00288	KDELR2	-	FALSE
chr1	92862904	A	G	0.00279		.	FALSE	AluJr	SINE,Alu
chr8	94744813	C	T	5.22032E-05	RBM12B	-	FALSE
chr15	85185045	T	C	0.00210	WDR73,SCAND2P	+,-	FALSE	AluSz	SINE,Alu
chr1	33147934	A	G	0.00251	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr1	117617705	A	G	0.00031	TTF2	+	FALSE
chr1	40537922	A	G	0.00686	CAP1	+	FALSE	(A)n	SINE,Alu
chr14	74388908	T	C	0.00835	ZNF410	+	FALSE
chr8	124262075	G	T	7.79989E-05	ZHX1-C8orf76,ZHX1	-	FALSE
chr2	39664278	C	A	0.00053	MAP4K3	-	FALSE	(CGC)n	SINE,Alu
chr1	228675570	G	C	0.00298	RNF187	+	FALSE
chr15	65442602	T	C	8.94083E-05	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	211917176	C	T	0.00498	LPGAT1	-	FALSE
chr3	176739159	A	C	0.00304	TBL1XR1	-	FALSE
chr2	206981856	T	C	0.00174		.	FALSE	AluJb	SINE,Alu
chr19	11256697	T	C	0.00039	SPC24	-	TRUE	AluJr4	SINE,Alu
chr1	32801694	A	C	0.00847	MARCKSL1	-	FALSE
chr19	46053393	T	C	0.00514	OPA3	-	TRUE	AluSx1	SINE,Alu
chr11	67795299	G	A	0.00764	ALDH3B1	+	FALSE
chr12	120898554	A	G	0.00124	GATC	+	TRUE	AluY	SINE,Alu
chr1	99164434	G	A	0.00309	SNX7	+	FALSE
chr4	165996838	T	C	0.00480		.	FALSE	AluSg4	SINE,Alu
chr10	22824828	A	T	0.00225	PIP4K2A	-	FALSE
chr1	6282426	T	C	0.00043	ICMT	-	TRUE	AluSz	SINE,Alu
chr2	85776832	C	T	0.00514	GGCX	-	FALSE
chr1	114940216	T	G	0.00148	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	153533586	T	C	0.00358	S100A2	-	FALSE	Charlie18a	SINE,Alu
chr19	42376843	A	G	0.00221		.	FALSE	AluSp	SINE,Alu
chr1	1668089	G	T	0.00801	SLC35E2	-	FALSE	AluSz	SINE,Alu
chr4	39550977	T	C	0.00987	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	12024235	C	T	0.00395	PLOD1	+	FALSE
chr1	45976269	C	G	0.00039	MMACHC	+	FALSE
chr3	184766301	T	C	0.00025	VPS8	+	FALSE
chr2	32535568	A	G	0.00016		.	FALSE	MER8	SINE,Alu
chr2	101623611	A	C	0.00826	RPL31	+	FALSE
chr1	44447004	G	A	0.00767	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr15	83659319	A	T	0.00130	FAM103A1,C15orf40	+,-	FALSE
chr3	14986104	T	C	0.00307	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr5	65120054	C	T	0.00625	NLN	+	FALSE
chr3	75475670	A	C	0.00506	FAM86DP	-	FALSE
chr5	149829076	G	C	0.00288	RPS14	-	FALSE
chr1	15989141	C	G	0.00364		.	FALSE
chr1	10521254	T	C	0.00041	DFFA	-	TRUE	AluY	SINE,Alu
chr1	19542463	T	C	0.00060	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	9428685	T	G	0.00416	SPSB1	+	FALSE
chr1	9910357	A	T	0.00056	CTNNBIP1	-	FALSE
chr1	109605648	A	G	0.00033		.	FALSE	AluY	SINE,Alu
chr2	201774185	T	C	0.00921		.	FALSE	AluSz	SINE,Alu
chr1	10517314	T	C	0.00368		.	FALSE	AluJr	SINE,Alu
chr7	128142395	A	C	0.00300	METTL2B	+	FALSE
chr2	37330368	T	C	0.00069		.	FALSE	AluSq2	SINE,Alu
chr5	149823791	G	T	0.00480		.	FALSE
chr7	107789927	T	C	0.00111	NRCAM	-	FALSE
chr1	36067677	T	C	1.65353E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	1647814	T	C	8.49337E-05	CDK11B,CDK11A	-	FALSE
chr1	20976075	T	C	0.00351	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr12	32794600	A	C	5.34959E-05	FGD4	+	FALSE
chr1	145511988	A	G	0.00965	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr15	34634033	A	G	0.00939	NOP10	-	FALSE
chr1	143464946	T	C	0.00109		.	FALSE
chr2	7036682	A	T	0.00335	RSAD2	+	FALSE
chrX	2824933	T	C	0.00066	ARSD	-	TRUE	AluSx1	SINE,Alu
chr4	17803604	T	C	0.00174	DCAF16	-	TRUE	AluY	SINE,Alu
chr2	37331546	T	C	0.00936		.	FALSE	AluJb	SINE,Alu
chrM	10307	A	C	0.00588		.	FALSE
chr1	19543352	T	C	0.00087	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	109239943	C	T	0.00722	PRPF38B	+	FALSE
chr1	2336210	C	T	0.00509	RER1	+	FALSE
chr3	148748198	G	A	3.62985E-05	HLTF	-	FALSE
chr1	160966299	T	C	0.00033	F11R	-	TRUE	AluSg	SINE,Alu
chr1	40539202	G	A	0.00966	PPT1	-	FALSE
chr1	1595048	T	C	0.00399	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	53291382	A	G	0.00114	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr6	26411987	T	C	0.00405	BTN3A1	+	FALSE
chr1	1572530	A	C	0.00425	CDK11B	-	FALSE
chr1	6259658	G	C	0.00012	RPL22	-	FALSE
chr3	44869002	G	T	0.00012	KIF15	+	FALSE
chr1	89271574	T	C	0.00074	PKN2	+	FALSE
chr5	130537747	A	G	1.40133E-05	LYRM7	+	TRUE	AluJb	SINE,Alu
chr2	20401854	A	T	2.80783E-05	SDC1	-	FALSE
chr1	157092836	G	A	0.00383		.	FALSE
chr3	10168802	A	G	6.92223E-05	BRK1	+	FALSE
chr1	145689566	A	G	0.00331	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr8	23087535	A	G	0.00491	LOC389641	+	FALSE	AluSx1	SINE,Alu
chr5	122165472	C	T	0.00147	SNX2	+	FALSE	(AC)n	SINE,Alu
chr1	10043002	A	G	0.00247	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	20826781	C	T	1.74444E-05	MUL1	-	FALSE
chr1	55317685	G	A	0.00121	DHCR24	-	FALSE	MIRb	SINE,Alu
chr2	99812450	A	G	7.07141E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr10	121437034	G	C	0.00120	BAG3	+	FALSE
chr6	26413368	T	G	0.01000	BTN3A1	+	FALSE
chr9	131872853	C	G	0.00108	CRAT	-	FALSE
chr1	10437995	G	A	0.00427	KIF1B	+	FALSE	AluSg	SINE,Alu
chr7	55433884	A	C	0.00271	LANCL2	+	FALSE
chr1	118502685	T	A	0.00333	WDR3,SPAG17	+,-	FALSE
chr1	24296869	G	T	0.00973		.	FALSE	AluSg	SINE,Alu
chr4	39552183	T	C	0.00479	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr3	196558328	A	G	1.33227E-14	PAK2	+	FALSE
chr13	50487353	T	C	0.00538	SPRYD7	-	TRUE	AluSg	SINE,Alu
chr3	5222483	T	G	1.83612E-05	ARL8B	+	FALSE
chr1	118502731	T	G	0.00155	WDR3,SPAG17	+,-	FALSE
chr1	52306087	C	T	0.00022	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr3	52289709	G	C	4.88711E-11	WDR82	-	FALSE	MIR	SINE,Alu
chr1	92148839	T	C	0.00259	TGFBR3	-	FALSE
chr1	20977913	T	G	0.00201	PINK1,PINK1-AS	+,-	FALSE
chr15	41591039	A	G	0.00214	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr4	83406548	A	T	0.00020	TMEM150C	-	FALSE
chr1	20977599	C	G	0.00489	PINK1,PINK1-AS	+,-	FALSE
chr2	86249906	T	C	0.00352	LOC90784	-	TRUE	AluJr	SINE,Alu
chr12	120898728	A	G	0.00947	GATC	+	TRUE	AluY	SINE,Alu
chr1	143135063	C	A	0.00397	LOC102723769	-	FALSE
chr19	53155625	T	C	0.00074	ZNF83	-	TRUE	AluSg	SINE,Alu
chr2	32532840	A	G	0.00243		.	FALSE	AluSx1	SINE,Alu
chr14	20923558	A	C	0.00373	APEX1	+	FALSE
chr14	31916927	T	C	1.57126E-05	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr5	37291386	T	C	1.33550E-08		.	FALSE	AluSx3	SINE,Alu
chr1	118066459	A	G	0.00788	MAN1A2	+	FALSE
chr1	33149495	A	G	0.00675	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr19	46289409	C	T	6.23760E-05	DMWD	-	FALSE
chr16	81064560	A	G	0.00014	CENPN	+	TRUE	AluSg	SINE,Alu
chrX	24095325	A	G	7.48023E-10	EIF2S3	+	TRUE	AluSx	SINE,Alu
chr3	15296358	A	T	4.17447E-06	SH3BP5,SH3BP5-AS1	+,-	FALSE
chr1	46806550	C	T	0.00105	NSUN4	+	FALSE
chr2	99812817	A	G	0.00018	MRPL30	+	TRUE	AluJb	SINE,Alu
chr19	58361328	G	C	0.00972	ZNF587	+	FALSE
chr1	32631809	C	T	2.91083E-08	KPNA6	+	FALSE
chr19	19792403	A	G	1.20818E-05	ZNF101	+	TRUE	AluJb	SINE,Alu
chr3	170609385	C	T	0.00212	EIF5A2	-	FALSE
chr2	20401859	A	T	0.00930	SDC1	-	FALSE	(A)n	SINE,Alu
chr3	32496328	C	A	0.00013	CMTM7	+	FALSE
chr5	149013587	G	A	0.00102	ARHGEF37	+	FALSE	L2d	SINE,Alu
chr4	68483513	G	A	3.54156E-05	UBA6	-	FALSE
chr4	13601337	G	A	7.28365E-09	BOD1L1	-	FALSE
chr3	160968914	T	C	0.00305	NMD3	+	FALSE
chr1	46078630	A	G	4.65755E-11	NASP	+	FALSE
chr1	10519888	T	C	0.00986		.	FALSE	AluJr	SINE,Alu
chr1	201846675	C	T	0.00145	IPO9	+	FALSE
chr1	33071159	A	G	0.00947	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	155429590	G	T	0.00356	ASH1L	-	FALSE
chr1	1288481	C	A	0.00013	MXRA8	-	FALSE
chr3	98531342	A	G	0.00607	DCBLD2	-	FALSE
chr2	24225013	A	G	0.00103		.	FALSE	AluSx	SINE,Alu
chr11	76733943	A	G	0.00925	ACER3	+	FALSE	A-rich	SINE,Alu
chr17	57279323	A	G	0.00159	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	100440563	A	G	0.00732	SLC35A3	+	FALSE	AluJb	SINE,Alu
chr5	175816759	T	A	0.00018		.	FALSE
chr7	65619242	A	G	0.00545	CRCP	+	TRUE	AluSz6	SINE,Alu
chr12	29493734	C	T	0.00163	ERGIC2	-	FALSE
chr1	15993713	A	T	7.45571E-05		.	FALSE	AluSx4	SINE,Alu
chr3	195411498	G	A	0.00722	SDHAP2	+	FALSE
chr12	123346990	G	T	0.00055	HIP1R	+	FALSE
chr1	109475629	A	G	0.00835	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	6282237	T	C	0.00455	ICMT	-	TRUE	AluSz	SINE,Alu
chr19	21366997	A	G	0.00727	ZNF431	+	TRUE	AluSc	SINE,Alu
chr5	7878179	C	T	0.00014	MTRR	+	FALSE
chr1	154554950	G	T	0.00599	ADAR	-	FALSE
chr1	46764013	G	A	0.00224	LRRC41	-	FALSE
chr7	6501832	A	C	0.00175	KDELR2	-	FALSE
chr2	201676441	G	A	0.00140	LOC101927795,BZW1	+,-	FALSE
chr3	99886662	G	A	0.00011	CMSS1	+	FALSE
chr5	125961648	A	G	0.00031	PHAX	+	FALSE	AluSz6	SINE,Alu
chr2	219523584	C	T	0.00299	ZNF142	-	FALSE
chr3	93780109	G	C	8.09346E-05	DHFR2	-	FALSE
chr1	54692331	T	C	0.00549	SSBP3	-	FALSE	(T)n	SINE,Alu
chr1	145293428	G	C	0.00855	NBPF20,NBPF10	+	FALSE
chr1	156613632	G	A	0.00187	BCAN	+	FALSE
chr2	36704033	T	A	0.00012	CRIM1	+	FALSE
chr1	154989595	T	C	0.00264	ZBTB7B	+	FALSE
chr7	64441627	G	A	0.00478	ZNF117	-	FALSE
chr1	32799512	A	T	0.00929	MARCKSL1	-	FALSE
chr1	20826083	G	A	0.00289	MUL1	-	FALSE
chr1	931935	T	C	0.00913		.	FALSE
chr13	73651653	G	T	0.00532	KLF5	+	FALSE
chr1	3745924	G	A	0.00612	CEP104	-	FALSE
chr1	121133779	C	G	0.00567	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr3	183890868	A	G	5.00274E-08	DVL3	+	FALSE	L2	SINE,Alu
chr2	37328100	T	C	0.00027		.	FALSE
chr2	37327614	T	C	0.00035		.	FALSE
chr1	20238572	A	T	0.00950	OTUD3	+	FALSE
chr7	128144035	A	G	0.00054		.	FALSE	AluSq2	SINE,Alu
chr1	94352553	C	T	0.00136	GCLM	-	FALSE	AluSx1	SINE,Alu
chr1	142688506	T	C	4.54862E-05		.	FALSE
chr1	120164252	G	A	0.00139	ZNF697	-	FALSE
chr1	16932809	C	T	0.00887	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	40214261	A	G	0.00879	PPIE	+	TRUE	AluSq2	SINE,Alu
chr1	230416038	G	A	0.00626	GALNT2	+	FALSE
chr1	12628188	T	C	3.43513E-08	DHRS3	-	FALSE
chr3	109049177	A	T	0.00044	DPPA4	-	FALSE	AluSp	SINE,Alu
chr15	44055281	T	C	0.00580	PDIA3	+	FALSE
chr1	53289688	A	G	0.00059	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr3	66419942	A	G	0.00284	SLC25A26	+	FALSE
chr4	39460539	G	A	0.00323	RPL9	-	FALSE
chr3	196556843	G	A	4.00732E-06	PAK2	+	FALSE
chr2	172412829	T	A	0.00477	CYBRD1	+	FALSE
chr1	1594196	T	C	0.00097	CDK11B,SLC35E2B	-	FALSE
chr1	1419768	A	G	0.00189	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	36067784	T	C	2.18848E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	34906662	T	C	4.70471E-07	RAD1	-	TRUE	AluJo	SINE,Alu
chr16	10623576	T	C	0.00013	EMP2	-	TRUE	AluSp	SINE,Alu
chr3	10192617	A	G	2.94246E-06	VHL	+	TRUE	AluSx1	SINE,Alu
chr5	140564263	C	T	0.00475	PCDHB16	+	FALSE
chr5	175934037	C	A	0.00182	FAF2	+	FALSE	A-rich	SINE,Alu
chr1	32641383	C	A	0.00112	KPNA6	+	FALSE	AluSx3	SINE,Alu
chr1	47716043	A	G	0.00794	STIL	-	FALSE
chr7	79848337	G	A	0.00037	GNAI1	+	FALSE
chr5	53841238	G	T	0.00267	SNX18	+	FALSE
chr5	149363273	A	G	0.00114	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr1	231154918	G	T	0.00022	FAM89A	-	FALSE	(T)n	SINE,Alu
chr1	100440553	A	G	0.00553	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr1	33148706	A	G	0.00087	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	55541174	A	G	0.00038	USP24	-	FALSE
chr5	134062606	T	G	0.00193	SEC24A	+	FALSE
chr8	146016990	C	T	0.00027	RPL8	-	FALSE
chr1	19542458	T	C	0.00113	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	101886749	T	G	0.00534	CNOT11	+	FALSE
chr14	75202704	A	G	2.33511E-06	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	114515717	G	A	0.00018	HIPK1	+	FALSE
chr1	52817393	T	C	0.00139	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr5	79922263	T	G	0.00913	DHFR	-	FALSE	HAL1	SINE,Alu
chr1	101354038	T	C	0.00565	EXTL2	-	TRUE	L1MB2	SINE,Alu
chr2	132481470	C	T	0.00594	C2orf27A	+	FALSE
chr2	132278713	T	C	0.00317	LOC150776	+	FALSE
chr1	75171751	T	C	0.00563	CRYZ	-	FALSE
chr1	45976220	A	G	0.00031	MMACHC	+	TRUE
chr2	99813007	A	G	0.00027	MRPL30	+	TRUE	AluJb	SINE,Alu
chr6	160100926	T	C	0.00028	SOD2	-	TRUE	AluSz	SINE,Alu
chr3	100084203	C	G	0.00484	TOMM70	-	FALSE
chr1	171751051	A	G	0.00522	METTL13	+	FALSE
chr1	21101368	T	C	0.00031	HP1BP3	-	TRUE	AluSc	SINE,Alu
chr1	148577409	C	A	0.00897	NBPF15	+	FALSE
chr4	190883001	C	G	0.00319	FRG1	+	FALSE
chr1	10521103	T	C	0.00788	DFFA	-	TRUE	AluY	SINE,Alu
chr1	230415244	T	C	0.00780	GALNT2	+	FALSE
chr1	144828845	A	T	0.00178	NBPF20,NBPF9	+	FALSE
chr1	46075663	A	G	0.00543	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	214529302	C	T	0.00331	PTPN14	-	FALSE	AluJb	SINE,Alu
chr3	156258273	T	C	0.00927	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	36032229	A	C	0.00806	NCDN	+	FALSE
chr1	10517513	T	C	0.00982		.	FALSE	AluSx1	SINE,Alu
chr20	25428617	A	G	0.00622	GINS1	+	FALSE	AluJb	SINE,Alu
chr1	45244411	C	A	0.00362	RPS8	+	FALSE
chr1	145281543	C	T	0.00031	NBPF20,NOTCH2NL	+	FALSE
chr1	6282371	T	C	0.00013	ICMT	-	TRUE	AluSz	SINE,Alu
chr3	4403537	C	T	0.00055	SUMF1	-	FALSE	MIR3	SINE,Alu
chr1	32373854	A	T	0.00096	PTP4A2	-	FALSE
chr1	1593857	T	C	0.00217	CDK11B,SLC35E2B	-	FALSE
chr1	225683161	T	G	0.00168	ENAH	-	FALSE	(T)n	SINE,Alu
chr3	10192826	A	G	0.00037	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	39010088	A	G	0.00192		.	FALSE	AluSp	SINE,Alu
chr2	86252214	T	C	0.00930	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	179042616	A	G	1.60543E-05	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	16889864	C	A	0.00598	NBPF1	-	FALSE
chr1	97543764	C	T	0.00840	DPYD	-	FALSE
chr15	90627429	T	C	0.00013	IDH2	-	FALSE
chr8	27632073	T	G	0.00013	ESCO2	+	FALSE
chr1	44463185	T	G	0.00397	SLC6A9	-	FALSE
chr1	173457017	C	T	0.00036	PRDX6	+	FALSE
chr1	19543456	T	C	0.00011	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	15114421	T	C	0.00353	RBSN	-	TRUE	AluY	SINE,Alu
chr20	42933642	T	C	0.00275	FITM2	-	TRUE	AluJo	SINE,Alu
chr5	37290323	T	C	0.00029		.	FALSE	AluSz	SINE,Alu
chr3	57612271	T	C	0.00831	DENND6A,PDE12	+,-	FALSE	AluSp	SINE,Alu
chr1	16894514	C	T	0.00348	NBPF1	-	FALSE
chr1	3416449	C	A	0.00748	MEGF6	-	FALSE
chr3	98299365	T	G	0.00133	CPOX	-	FALSE
chr1	21102501	G	A	0.00148	HP1BP3	-	FALSE
chr7	102016321	C	T	0.00201	LOC100289561,LOC100630923	+	FALSE
chr12	98943187	A	G	2.29648E-09	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	31532379	A	G	0.00092	PUM1	-	FALSE
chr4	38945689	C	T	1.01800E-05	FAM114A1	+	FALSE	AluSc	SINE,Alu
chr3	14526653	G	T	0.00936	SLC6A6	+	FALSE
chr1	16842064	A	C	0.00081		.	FALSE	MER41E	SINE,Alu
chr1	184675814	G	A	0.00048	EDEM3	-	FALSE
chr1	113000565	A	G	0.00216	CTTNBP2NL	+	FALSE
chrX	118672600	T	C	0.00080	CXorf56	-	TRUE	AluSx	SINE,Alu
chr9	33624856	C	T	0.00823	ANXA2P2	+	FALSE
chr2	9558812	G	T	0.00427	ITGB1BP1	-	FALSE
chr19	19793709	A	G	0.00700	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr1	163116048	G	T	3.38683E-05	RGS5	-	FALSE
chr1	44072018	C	T	0.00160	PTPRF	+	FALSE
chr1	94983203	C	T	0.00686	ABCD3	+	FALSE
chr3	48784500	T	A	0.00264	PRKAR2A	-	FALSE	(T)n	SINE,Alu
chr5	203683	G	T	0.00399		.	FALSE	MIRb	SINE,Alu
chrX	152916229	G	A	0.00809	DUSP9	+	FALSE
chr3	15780233	C	T	1.83528E-06	ANKRD28	-	FALSE	MER11B	SINE,Alu
chr2	37328034	T	C	1.98403E-05		.	FALSE
chr1	16945409	T	A	0.00290	CROCCP2	-	FALSE
chr1	10521170	T	C	0.00498	DFFA	-	TRUE	AluY	SINE,Alu
chr3	160219829	C	T	0.00654	KPNA4	-	FALSE	(TA)n	SINE,Alu
chr1	179042692	A	G	0.00707	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	9160975	T	C	0.00858		.	FALSE	AluJb	SINE,Alu
chr11	69480680	T	C	0.00252	ORAOV1	-	FALSE	AluSx1	SINE,Alu
chr4	128756579	A	G	0.00501		.	FALSE	AluSx	SINE,Alu
chr1	1684346	G	C	0.00504	NADK	-	FALSE
chr2	155555207	A	C	0.00073	KCNJ3	+	FALSE
chr1	36067811	T	C	0.00439	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	38971040	G	T	0.00651	SRSF7	-	FALSE
chrX	77083845	T	C	0.00102	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	16952481	A	G	0.00093	CROCCP2	-	FALSE
chr16	10623639	T	C	0.00392	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	6283306	T	C	0.00275	ICMT	-	TRUE	AluSx3	SINE,Alu
chr7	29961884	C	G	0.00024	SCRN1	-	FALSE
chr3	49762662	G	T	6.99764E-06	IP6K1	-	FALSE
chr1	43629982	C	T	0.00118	EBNA1BP2	-	FALSE
chr1	11084105	T	A	0.00116	TARDBP	+	FALSE
chr2	161130867	C	A	0.00034	RBMS1	-	FALSE
chr5	37290336	T	C	0.00036		.	FALSE	AluSz	SINE,Alu
chr2	109301897	T	C	0.00306	LIMS1	+	FALSE
chr1	10042911	A	G	0.00043	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr17	65335445	T	C	0.00084	PSMD12	-	TRUE	AluSx	SINE,Alu
chr5	130494984	A	T	0.00018	HINT1	-	FALSE
chr7	138732191	T	C	0.00746	ZC3HAV1	-	TRUE	MER5B	SINE,Alu
chr1	144821900	C	G	6.24876E-05	NBPF20,NBPF9	+	FALSE
chr11	65065373	A	G	0.00487	POLA2	+	TRUE	AluY	SINE,Alu
chr1	17199803	C	T	0.00997	LOC440570	+	FALSE
chr2	10179657	A	C	0.00035		.	FALSE	L1ME4b	SINE,Alu
chr1	38158211	C	T	0.00113	CDCA8	+	FALSE
chr12	98942690	A	G	3.03569E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	16258610	C	G	0.00142	SPEN	+	FALSE
chr1	39989926	T	C	0.00354	BMP8A,PPIEL	+,-	FALSE
chr4	113108680	A	G	0.00109	C4orf32	+	FALSE
chr11	18552273	C	T	0.00243		.	FALSE
chr7	100031496	T	A	0.00119	MEPCE	+	FALSE
chrX	77083007	T	C	0.00371	MAGT1	-	TRUE	AluSg	SINE,Alu
chr1	10517314	T	C	0.00288		.	FALSE	AluJr	SINE,Alu
chr2	70452142	T	G	0.00191	TIA1	-	FALSE
chr11	3716835	C	T	0.00828	NUP98	-	FALSE
chr1	109747437	A	G	0.00104	KIAA1324	+	TRUE	AluJr4	SINE,Alu
chr4	2940434	T	C	1.52137E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr3	27763674	T	G	0.00617	EOMES	-	FALSE
chr1	144615223	C	G	0.00324	NBPF20,NBPF9	+	FALSE
chr1	45244411	C	A	0.00656	RPS8	+	FALSE
chr1	214529725	T	C	0.00535	PTPN14	-	TRUE
chr1	36527402	A	T	0.00278		.	FALSE
chr3	44790759	T	C	1.45198E-07	KIAA1143	-	TRUE	AluY	SINE,Alu
chr2	174090320	T	A	0.00174	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	1344998	A	G	0.00235		.	FALSE	AluSg	SINE,Alu
chr1	114940228	C	T	0.00734	TRIM33	-	FALSE	(T)n	SINE,Alu
chr17	80347528	T	C	0.00048	OGFOD3	-	TRUE	AluJb	SINE,Alu
chr7	44917406	T	C	0.00021	PURB	-	TRUE	AluSz	SINE,Alu
chr1	16889014	C	T	0.00722	NBPF1	-	FALSE
chr1	145281408	C	T	0.00087	NBPF20,NOTCH2NL	+	FALSE
chr3	183900836	G	A	2.54977E-05	AP2M1	+	FALSE
chr3	15113842	T	C	0.00100	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	1650801	T	C	0.00827	CDK11B,CDK11A	-	FALSE
chr4	169299528	T	C	0.00745	DDX60L	-	FALSE
chr1	10520178	T	C	0.00112		.	FALSE	AluSx	SINE,Alu
chr1	23636273	A	T	0.00442	HNRNPR	-	FALSE
chr1	16889127	A	G	0.00213	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr2	176792488	G	T	0.00195	LNPK	-	FALSE
chr1	100316589	A	G	0.00147	AGL	+	FALSE
chr2	192699639	A	G	0.00017	SDPR	-	FALSE
chr1	16889575	T	C	0.00467	NBPF1	-	TRUE
chr1	10520076	T	C	0.00763		.	FALSE	AluSx	SINE,Alu
chr16	58195430	G	C	0.00325	CSNK2A2	-	FALSE	(AC)n	SINE,Alu
chr1	156256064	C	T	0.00619	SMG5,TMEM79	+,-	FALSE
chr1	21100860	C	A	0.00445	HP1BP3	-	FALSE	(AC)n	SINE,Alu
chr1	16918783	C	T	0.00252	NBPF1	-	FALSE
chr1	45976257	C	A	0.00015	MMACHC	+	FALSE
chr11	31452750	A	G	0.00326	DNAJC24	+	TRUE	AluSx1	SINE,Alu
chr1	145116147	T	A	0.00031	NBPF20,SEC22B	+	FALSE
chr1	16096934	C	T	0.00336	FBLIM1	+	FALSE
chr4	39550977	T	C	3.35724E-05	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	10517313	T	C	0.00196		.	FALSE	AluJr	SINE,Alu
chr5	109204057	T	A	0.00614	MAN2A1	+	FALSE
chr1	9161231	T	C	5.02708E-05		.	FALSE	AluSx	SINE,Alu
chr15	41590839	A	G	0.00344	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr2	201774341	T	C	0.00073		.	FALSE	AluSz	SINE,Alu
chr3	156259314	T	C	2.71784E-05	SSR3	-	TRUE	AluSq2	SINE,Alu
chr7	99006740	G	A	0.00269	BUD31	+	FALSE
chr2	85548074	T	C	0.00724	TGOLN2	-	FALSE
chr1	1683565	G	A	0.00269	NADK	-	FALSE
chr19	19793795	A	G	0.00030	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr1	11979815	A	C	0.00274	KIAA2013	-	FALSE
chr12	19671149	C	T	0.00315	AEBP2	+	FALSE
chr1	19586532	A	G	0.00769	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	204055454	T	C	0.00293	NBEAL1	+	FALSE
chr2	170497653	T	G	0.00587		.	FALSE
chr1	16958064	A	G	0.00240		.	FALSE
chr1	3545200	G	A	0.00676	TPRG1L	+	FALSE
chr5	122359498	A	C	0.00038	PPIC	-	FALSE	(AC)n	SINE,Alu
chr1	101443431	C	T	0.00013	SLC30A7	+	FALSE	AluSq2	SINE,Alu

RBP	SLIRP
Knock-Method	siRNA
RBP Family	RRM_1
Biosample Name	LNCaP
Tissue Type	Prostate
Biosample Type	Cell line
# of Control	4
# of Treat	4
Species	Human
Data Source	GEO
Profile ID	GSE77829
Platform	GPL11154
Pubmed ID	31819114

SLIRP - Target Gene Network