RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	113243048	C	T	0.00941	MOV10	+	FALSE
chr1	183155546	G	A	0.00103	LAMC2	+	FALSE
chr1	1459332	G	A	1.33172E-08	ATAD3A	+	FALSE
chr7	73150511	T	C	0.00414	ABHD11	-	FALSE
chr1	65147002	C	T	6.62669E-07	CACHD1	+	FALSE
chr1	569981	C	A	4.36771E-05		.	FALSE
chr1	29519665	T	C	0.00680	MECR	-	TRUE	AluJb	SINE,Alu
chr1	204524842	A	G	0.00044	MDM4	+	TRUE	AluSx	SINE,Alu
chr5	122359502	A	C	0.00707	PPIC	-	FALSE	(AC)n	SINE,Alu
chr3	126755134	C	T	0.00920	PLXNA1	+	FALSE
chr1	23636030	A	T	0.00067	HNRNPR	-	FALSE
chr1	53288862	A	G	0.00799	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr12	133297956	A	G	4.23080E-06	PGAM5	+	TRUE	AluJo	SINE,Alu
chr4	187628394	G	A	0.00000	FAT1	-	FALSE
chr2	233199107	C	T	0.00675	DIS3L2	+	FALSE
chr2	206986926	T	C	0.00913		.	FALSE	AluJr	SINE,Alu
chr5	36143392	C	T	0.00625	LMBRD2	-	FALSE
chr2	75888160	A	C	0.00188	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr6	149915565	A	G	0.00198	RPS18P9	+	FALSE
chr1	168218574	A	G	0.00898		.	FALSE	AluSz	SINE,Alu
chr4	39550967	T	C	2.19217E-06	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	33071096	A	G	0.00238	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr9	115447518	T	C	0.00084	INIP	-	TRUE	AluJb	SINE,Alu
chr1	17313654	C	T	0.00714	ATP13A2	-	FALSE
chr2	3592674	C	A	0.00011	RNASEH1	-	FALSE
chr17	79514129	G	A	0.00164	FAAP100	-	FALSE
chr20	25427885	A	G	0.00455	GINS1	+	TRUE	AluSz	SINE,Alu
chr2	29023124	G	T	0.00477	PPP1CB	+	FALSE
chr1	1419768	A	G	0.00250	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	26608009	T	A	0.00496	SH3BGRL3	+	FALSE
chr1	16932144	A	C	1.90883E-05	NBPF1	-	FALSE
chr4	6644391	G	A	0.00000	MRFAP1	+	FALSE
chr1	10517306	T	C	0.00102		.	FALSE	AluJr	SINE,Alu
chr5	79923293	T	C	0.00039	DHFR	-	TRUE	AluJr	SINE,Alu
chr3	5025537	G	A	0.00195	BHLHE40	+	FALSE	(GT)n	SINE,Alu
chr10	75009585	T	C	2.45347E-10	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr1	326539	A	G	0.00450		.	FALSE
chr1	33149400	A	G	0.00407	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr5	37291446	T	C	6.87884E-05		.	FALSE	AluSx3	SINE,Alu
chr2	69688901	T	C	0.00503	AAK1	-	TRUE	AluSq2	SINE,Alu
chr2	7182946	T	C	0.00748	RNF144A	+	FALSE
chr1	19542455	T	C	0.00048	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr5	170832637	C	T	0.00071	NPM1	+	FALSE
chr7	30544360	G	A	0.00170	GGCT	-	FALSE
chr9	132573290	C	T	0.00881	TOR1B	+	FALSE
chr1	53291395	A	G	0.00017	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	1594977	T	C	7.82676E-05	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	179832838	A	G	0.00018	TOR1AIP2	-	FALSE	MLT1L	SINE,Alu
chrX	77083617	T	C	3.46806E-05	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	16932845	T	G	0.00732	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr6	42854580	A	G	0.00330	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr1	16939857	C	T	0.00091	NBPF1	-	FALSE
chr1	27107948	G	A	0.00177	ARID1A	+	FALSE
chr8	41798912	T	C	0.00892	KAT6A	-	FALSE
chr1	150771703	T	C	0.00500	CTSK	-	FALSE
chr1	94995585	G	A	0.00266	F3	-	FALSE	AluSx	SINE,Alu
chr1	59124223	G	A	0.00256	MYSM1	-	FALSE	MIR3	SINE,Alu
chr3	4403394	A	G	0.00388	SUMF1	-	FALSE
chr15	41591417	A	G	2.88542E-07	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr1	16929279	G	A	0.00138	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr15	65442476	T	C	0.00084	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	70718273	A	T	0.00256		.	FALSE
chr10	73994170	A	G	0.00218	ANAPC16	+	TRUE	AluJr	SINE,Alu
chr1	27533879	G	A	0.00877		.	FALSE
chr3	49142142	G	T	6.70614E-05	QARS	-	FALSE
chr14	75202372	A	G	8.84130E-05	FCF1	+	TRUE	AluSc	SINE,Alu
chr2	75888160	A	C	0.00368	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr1	1477244	T	C	0.00365	SSU72	-	FALSE
chr17	1684352	T	C	0.00793	SMYD4	-	TRUE	AluSx1	SINE,Alu
chr2	191829133	G	A	0.00097	GLS	+	FALSE
chr3	182632684	G	A	0.00116	ATP11B	+	FALSE
chr3	183534170	C	T	0.00090	MAP6D1	-	FALSE
chr2	188330198	C	A	0.00091	TFPI	-	FALSE	AluJb	SINE,Alu
chr2	61278030	A	G	0.00218	PEX13	+	TRUE	AluY	SINE,Alu
chr2	105962339	G	A	0.00079	C2orf49	+	FALSE	AluSp	SINE,Alu
chr1	24999101	G	T	0.00100	SRRM1	+	FALSE
chr3	195694454	C	T	0.00092	SDHAP1	-	FALSE
chr8	11701485	T	C	0.00027	CTSB	-	TRUE	AluSx1	SINE,Alu
chr3	119545349	T	C	0.00805	GSK3B	-	FALSE
chr14	75202834	A	G	7.36085E-05	FCF1	+	TRUE	AluSx	SINE,Alu
chr1	16918734	G	C	0.00600	NBPF1	-	FALSE
chr1	990984	G	A	0.00787	AGRN	+	FALSE
chr1	19984104	A	C	0.00638	MINOS1-NBL1,NBL1	+	FALSE
chr1	1152309	A	T	0.00030	SDF4	-	FALSE
chr15	65442483	T	C	0.00523	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	36068237	T	C	0.00974	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	176791183	T	C	0.00252	LNPK	-	TRUE	MSTD	SINE,Alu
chr1	9161245	T	C	0.00429		.	FALSE	AluSx	SINE,Alu
chr1	115119377	A	T	0.00157	BCAS2	-	FALSE
chr10	72187740	C	A	0.00668	EIF4EBP2	+	FALSE
chr3	10192798	A	G	0.00722	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	11347152	A	T	0.00401	UBIAD1	+	FALSE
chr12	27953266	G	T	0.00198	KLHL42	+	FALSE
chr7	44841489	A	G	0.00015	PPIA	+	TRUE	AluJr	SINE,Alu
chr9	80333361	C	T	0.00382	GNAQ	-	FALSE
chr1	76227022	A	G	0.00035	ACADM	+	FALSE
chr10	75009651	T	C	0.00558	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr8	12283440	A	G	0.00041	FAM86B2	-	FALSE
chr1	200521297	C	T	0.00133	KIF14	-	FALSE	(T)n	SINE,Alu
chr1	10519064	T	C	0.00515		.	FALSE	AluSx3	SINE,Alu
chr2	37431639	T	C	0.00160	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr18	28571649	A	T	0.00301	DSC3	-	FALSE	MER65C	SINE,Alu
chr2	219146868	T	C	0.00764	PNKD,TMBIM1	+,-	FALSE
chr9	131872852	G	C	0.00064	CRAT	-	FALSE
chr3	50139142	A	G	0.00467	RBM5	+	FALSE
chr1	145509569	A	G	0.00777	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	220231276	T	C	0.00937	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr6	42856118	A	G	0.00743	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	1309464	C	T	1.11022E-16	AURKAIP1	-	FALSE
chr5	52389817	T	A	0.00868	ITGA2	+	FALSE
chr5	36687341	T	C	0.00930	SLC1A3	+	FALSE
chr19	7084638	A	G	0.00508	ZNF557	+	TRUE	AluJb	SINE,Alu
chr1	15899345	T	C	0.00300	AGMAT	-	TRUE	AluSx3	SINE,Alu
chr4	188925184	G	A	0.00032	ZFP42	+	FALSE
chr1	171501831	A	G	0.00040	PRRC2C	+	FALSE
chr1	16933135	G	T	0.00363	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr4	17802919	T	C	0.00857	DCAF16	-	TRUE	AluSz	SINE,Alu
chr3	169810385	C	T	0.00621	PHC3	-	FALSE
chrX	16781275	A	G	0.00417		.	FALSE	AluJo	SINE,Alu
chr12	109887765	T	G	0.00091	KCTD10	-	FALSE
chr1	16933753	G	A	0.00740	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	16894514	C	T	0.00348	NBPF1	-	FALSE
chr2	128602974	A	T	4.23982E-05		.	FALSE	AluSp	SINE,Alu
chr11	94863483	C	T	0.00501	ENDOD1	+	FALSE
chr1	53289686	A	G	0.00063	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	179312752	C	T	0.00106	SOAT1	+	FALSE
chr2	37327702	T	C	0.00119		.	FALSE
chr19	11256703	T	C	2.95254E-05	SPC24	-	TRUE	AluJr4	SINE,Alu
chr12	56510696	A	T	0.00767	RPL41	+	FALSE
chr2	206987109	T	C	0.00280		.	FALSE	AluSx	SINE,Alu
chr1	24022912	G	A	4.29449E-05	RPL11	+	FALSE
chr5	137891109	C	G	0.00031	HSPA9	-	FALSE
chr2	64479079	G	A	0.00452	LOC100507006	+	FALSE
chr6	42856105	A	G	0.00972	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr19	53155567	T	C	0.00137	ZNF83	-	TRUE	AluSg	SINE,Alu
chr7	17384395	A	G	1.20082E-06	AHR	+	TRUE	AluSx	SINE,Alu
chr16	25269014	G	C	0.00235		.	FALSE
chr1	113212976	C	T	0.00332	CAPZA1	+	FALSE
chr1	93811476	G	C	0.00663		.	FALSE
chr5	135392426	T	C	8.62804E-07	TGFBI	+	FALSE
chr1	22186113	T	G	0.00083	HSPG2	-	FALSE
chr3	121351277	A	T	0.00388	HCLS1	-	FALSE
chr19	3053116	G	C	0.00276	AES	-	FALSE
chr1	6283551	T	C	0.00324	ICMT	-	FALSE
chr2	201774342	T	C	0.00127		.	FALSE	AluSz	SINE,Alu
chr2	206985727	C	T	0.00786		.	FALSE	MIRc	SINE,Alu
chr3	44791406	T	C	0.00598	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	36067784	T	C	1.68158E-09	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	118174735	T	C	0.00046	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	144521099	A	G	0.00196	NBPF20	+	FALSE
chr1	143135240	C	T	0.00391	LOC102723769	-	FALSE
chr5	134062608	G	T	0.00171	SEC24A	+	FALSE
chr2	132275343	G	T	0.00334	LOC150776	+	FALSE
chr1	44818529	T	C	0.00310	ERI3	-	FALSE
chr12	53435277	G	T	2.75857E-05	EIF4B	+	FALSE
chr2	85546320	G	T	0.00749	TGOLN2	-	FALSE	AluSc	SINE,Alu
chr5	176887511	A	C	0.00662	DBN1	-	FALSE
chr11	9466935	T	G	0.00439	IPO7	+	FALSE
chr15	22969232	G	A	0.00017	CYFIP1	+	FALSE
chr1	16893822	C	T	0.00808	NBPF1	-	FALSE
chr1	33240842	C	T	0.00446	YARS	-	FALSE
chr1	100489992	A	G	0.00297	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr1	53250625	T	C	0.00178	ZYG11B	+	FALSE
chr1	168218504	T	C	0.00748		.	FALSE	AluSz	SINE,Alu
chr3	196079691	T	C	0.00507		.	FALSE	AluSc	SINE,Alu
chr1	1419746	A	G	0.00016	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	53288897	A	G	0.00439	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr2	132279046	G	T	0.00967	LOC150776	+	FALSE
chr1	144930596	C	A	0.00103	NBPF20,PDE4DIP	+,-	FALSE
chr8	143763618	C	G	0.00421	PSCA	+	FALSE
chr2	9629955	G	T	0.00866	ADAM17	-	FALSE
chr1	53291435	A	G	0.00790	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr5	52393421	C	T	0.00144	MOCS2	-	FALSE	L1MA9	SINE,Alu
chr1	154554940	G	C	0.00032	ADAR	-	FALSE
chr2	136541076	C	A	0.00211	UBXN4	+	FALSE
chr1	22445725	C	G	0.00913	WNT4	-	FALSE
chr3	128338880	T	A	0.00828	RPN1	-	FALSE
chr1	100548868	T	C	8.06321E-05	MFSD14A	+	FALSE
chr2	72968440	T	A	0.00138	EXOC6B	-	FALSE
chr1	110596904	A	G	0.00364	STRIP1	+	FALSE
chr1	214524129	T	C	0.00052	PTPN14	-	TRUE	AluSx	SINE,Alu
chr1	6283348	T	C	0.00247	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	144916748	C	G	0.00354	NBPF20,PDE4DIP	+,-	FALSE
chr1	16011005	G	C	0.00616	PLEKHM2	+	FALSE	(GCG)n	SINE,Alu
chr1	12073252	A	G	0.00990	MFN2	+	FALSE
chr9	96439041	A	T	0.00751	PHF2	+	FALSE
chr1	24287616	G	A	0.00218	PNRC2	+	FALSE
chr1	39470978	T	A	0.00378	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr12	12967264	C	G	0.00781	DDX47	+	FALSE
chr1	16945409	T	A	0.00105	CROCCP2	-	FALSE
chr17	38632679	T	G	0.00044	TNS4	-	FALSE	(GT)n	SINE,Alu
chr3	169490779	G	A	0.00147		.	FALSE
chr1	234740975	G	A	0.00106	IRF2BP2	-	FALSE
chr7	129472357	A	G	0.00287	UBE2H	-	FALSE
chr1	28661633	A	G	0.00053	MED18	+	TRUE	AluSg	SINE,Alu
chr6	42854611	A	G	0.00541	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr1	45226084	G	A	0.00970	KIF2C	+	FALSE
chr14	50361171	C	T	0.00017	ARF6	+	FALSE	(T)n	SINE,Alu
chr4	38946481	A	G	0.00168	FAM114A1	+	FALSE	MER1B	SINE,Alu
chr1	214529247	T	C	0.00233	PTPN14	-	TRUE
chr5	37290336	T	C	0.00036		.	FALSE	AluSz	SINE,Alu
chr4	57326291	A	G	0.00279	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	1252443	T	C	0.00392	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr1	145311900	C	T	0.00286	NBPF20,NBPF10	+	FALSE
chr3	183900680	G	C	0.00294	AP2M1	+	FALSE	MIR3	SINE,Alu
chr1	38280010	C	T	0.00393	MTF1	-	FALSE
chr1	19542463	T	C	0.00746	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr20	35869801	G	A	0.00150	RPN2	+	FALSE
chr1	19543457	T	C	0.00569	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	194789330	G	T	0.00150	XXYLT1	-	FALSE	AluJr	SINE,Alu
chr2	37328012	T	C	6.47624E-05		.	FALSE
chr4	52888026	A	C	0.00677	SGCB	-	FALSE
chr2	217366196	T	A	0.00207		.	FALSE
chr1	27992798	C	A	0.00690	IFI6	-	FALSE	FAM	SINE,Alu
chr1	6282401	T	C	0.00469	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	87213177	C	A	0.00020	SH3GLB1	+	FALSE
chr1	1001422	G	T	0.00998		.	FALSE	LTR13A	SINE,Alu
chr19	11256626	T	C	1.61091E-07	SPC24	-	TRUE	AluJr4	SINE,Alu
chr7	43665371	A	T	0.00430	STK17A,COA1	+,-	FALSE	(AG)n	SINE,Alu
chr1	53679610	G	A	0.00073	CPT2	+	FALSE	AluSz	SINE,Alu
chr19	19793709	A	G	0.00700	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr1	36068370	T	C	0.00846	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	37290504	T	C	0.00410		.	FALSE	AluSz	SINE,Alu
chr1	16929327	C	T	0.00315	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	16932368	T	A	0.00336	NBPF1	-	FALSE	MLT1F-int	SINE,Alu
chr4	56236480	T	A	0.00967	SRD5A3,SRD5A3-AS1	+,-	FALSE
chr4	40631476	C	A	5.49937E-05	RBM47	-	FALSE
chr1	9160900	T	C	0.00256		.	FALSE	AluJb	SINE,Alu
chr1	67874689	T	C	1.72813E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr4	17803604	T	C	0.00414	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	19447819	T	C	0.00337	UBR4	-	FALSE
chr1	6651728	C	T	0.00118	KLHL21	-	FALSE
chr12	98943187	A	G	2.29648E-09	TMPO	+	TRUE	AluSz	SINE,Alu
chr2	32534897	A	G	0.00680		.	FALSE	AluSx1	SINE,Alu
chr1	38423183	C	T	0.00210	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	117648269	G	A	0.00988		.	FALSE	AluSz6	SINE,Alu
chrX	123045342	A	G	0.00381	XIAP	+	FALSE	(ATAA)n	SINE,Alu
chr1	154128827	A	T	0.00724	TPM3	-	FALSE
chr1	23636277	A	T	0.00295	HNRNPR	-	FALSE
chr1	10520672	T	C	0.00584	DFFA	-	TRUE	AluSc8	SINE,Alu
chr17	4930749	A	G	0.00025	KIF1C	+	TRUE	FLAM_A	SINE,Alu
chr12	12796592	A	C	0.00801	CREBL2	+	FALSE
chr7	36447345	A	T	0.00553	ANLN	+	FALSE
chr5	204215	A	G	0.00872		.	FALSE	MER68	SINE,Alu
chr1	1593023	G	C	2.84325E-05	CDK11B,SLC35E2B	-	FALSE
chr1	46828653	T	A	0.00920	NSUN4	+	FALSE
chr1	40539212	C	A	0.00380	PPT1	-	FALSE
chr19	42375586	A	G	0.00404		.	FALSE	AluSx	SINE,Alu
chr3	57551513	A	G	0.00037	PDE12	+	TRUE	AluSc	SINE,Alu
chr21	34729930	A	G	0.00060	IFNAR1	+	TRUE	AluSg7	SINE,Alu

RBP	STAU2
Knock-Method	shRNA
RBP Family	dsrm
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	3
# of Treat	3
Species	Human
Data Source	GEO
Profile ID	GSE135012
Platform	GPL11154
Pubmed ID	N.A.

STAU2 - Target Gene Network