RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr17	4929863	A	G	0.00597	KIF1C	+	TRUE	AluJb	SINE,Alu
chr1	28823671	T	C	0.00073	PHACTR4	+	FALSE
chr1	6697343	C	T	0.00054	DNAJC11	-	FALSE
chr1	21101369	T	C	0.00244	HP1BP3	-	TRUE	AluSc	SINE,Alu
chr1	28825805	G	A	0.00115	PHACTR4	+	FALSE	AluSp	SINE,Alu
chr1	202861470	C	A	0.00441	KLHL12	-	FALSE
chr13	79188534	T	A	0.00698	RNF219-AS1,RNF219	+,-	FALSE
chr1	110913120	C	T	0.00627	SLC16A4	-	FALSE
chr2	128060040	T	C	0.00494	MAP3K2	-	FALSE	(CA)n	SINE,Alu
chr4	129796173	G	T	1.40481E-05	JADE1	+	FALSE
chr1	19934839	A	G	0.00052	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	145324364	C	G	0.00157	NBPF20,NBPF10	+	FALSE
chr10	88729314	C	T	8.29001E-05	ADIRF	+	FALSE
chr1	201846675	C	T	0.00145	IPO9	+	FALSE
chr17	40466890	G	T	0.00260	STAT3	-	FALSE	AluSc8	SINE,Alu
chr2	170403030	T	C	0.00294	FASTKD1	-	FALSE
chr8	30536015	T	C	0.00286	GSR	-	TRUE	AluJr	SINE,Alu
chr1	1593857	T	C	0.00424	CDK11B,SLC35E2B	-	FALSE
chr1	179813613	T	C	0.00595	TOR1AIP2	-	FALSE
chr4	39550564	T	C	0.00996	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr5	134260212	C	T	0.00264	PCBD2	+	FALSE
chr12	89914261	T	C	0.00135	POC1B,GALNT4,POC1B-GALNT4	-	FALSE
chr1	900720	A	T	0.00065	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	23636452	A	G	0.00294	HNRNPR	-	FALSE
chr1	145689843	A	G	4.95254E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr1	19953120	G	A	0.00025	MINOS1,MINOS1-NBL1	+	FALSE
chr2	127826533	A	G	0.00104	BIN1	-	FALSE
chr1	150048520	C	T	0.00089	VPS45	+	FALSE
chr1	23408016	C	A	4.80633E-05	KDM1A	+	FALSE
chr5	134670071	A	T	0.00405	C5orf66,H2AFY	+,-	FALSE
chr1	109475572	A	G	0.00170	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	9161203	T	C	0.00235		.	FALSE	AluSx	SINE,Alu
chr1	70718276	G	T	0.00493		.	FALSE
chr2	70316299	C	A	0.00650	PCBP1	+	FALSE
chr5	37290400	T	C	0.00085		.	FALSE	AluSz	SINE,Alu
chr1	201438098	T	G	2.75480E-05	PHLDA3	-	FALSE
chr3	65341374	T	A	0.00029	MAGI1	-	FALSE
chr1	16576836	A	G	0.00885	FBXO42	-	FALSE
chr1	6582527	T	C	0.00139	NOL9	-	TRUE	AluSx1	SINE,Alu
chr21	34728215	A	G	0.00153	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr3	32997308	A	G	0.00082		.	FALSE	AluY	SINE,Alu
chr6	74133914	T	C	0.00014		.	FALSE	AluY	SINE,Alu
chr1	32688036	A	T	0.00265	EIF3I	+	FALSE
chr1	120163247	T	C	0.00365	ZNF697	-	FALSE
chr1	11347150	C	A	0.00366	UBIAD1	+	FALSE
chr2	98090925	T	C	0.00056	LOC100506076	-	FALSE	L1PREC2	SINE,Alu
chr1	10518733	T	C	0.00952		.	FALSE	AluSx1	SINE,Alu
chr2	37327665	T	C	2.45403E-06		.	FALSE
chr6	37142192	C	T	0.00850	PIM1	+	FALSE
chr19	17412218	C	T	0.00790	ABHD8	-	FALSE
chr1	6651457	G	A	0.00614	KLHL21	-	FALSE
chr1	154919080	C	T	0.00376	PBXIP1	-	FALSE
chr1	154128333	T	A	0.00204	TPM3	-	FALSE
chr1	789187	C	G	5.07459E-05	LINC01128	+	FALSE
chr2	223765491	C	T	0.00689	ACSL3	+	FALSE
chr1	19578192	G	A	0.00778	MRTO4	+	FALSE
chr1	142449	G	A	0.00073		.	FALSE	MIRb	SINE,Alu
chr1	2336210	C	T	0.00175	RER1	+	FALSE
chr3	156258308	T	C	0.00323	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	10519947	T	C	0.00534		.	FALSE	AluJr	SINE,Alu
chr1	164473	T	C	0.00152		.	FALSE	AluSq2	SINE,Alu
chr1	6279957	A	G	0.00814	RNF207	+	TRUE	AluSp	SINE,Alu
chr1	156256064	C	T	0.00619	SMG5,TMEM79	+,-	FALSE
chr1	24862643	T	G	0.00079	RCAN3	+	FALSE
chr1	16889044	T	A	0.00256	NBPF1	-	FALSE
chr1	16889414	T	C	0.00384	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr10	124815149	C	G	0.00993	ACADSB	+	FALSE	THE1A-int	SINE,Alu
chr17	73703945	C	T	0.00242	SAP30BP	+	FALSE	MIRc	SINE,Alu
chr2	26613948	A	G	0.00218	EPT1	+	FALSE
chr1	92862896	A	G	6.86172E-05		.	FALSE	AluJr	SINE,Alu
chr3	39137788	A	C	0.00830	WDR48	+	FALSE
chr1	160112340	A	G	0.00374	ATP1A2	+	TRUE	AluSx3	SINE,Alu
chr1	228107281	G	A	0.00833		.	FALSE
chr1	31732602	C	A	0.00148	SNRNP40	-	FALSE
chr2	17965390	T	C	0.00713	GEN1	+	FALSE	L1M4	SINE,Alu
chr12	133333936	C	T	0.00726	ANKLE2	-	FALSE	MER58A	SINE,Alu
chr1	32793185	C	T	0.00015	HDAC1	+	FALSE
chr1	788795	T	G	0.00333	LINC01128	+	FALSE	Charlie19a	SINE,Alu
chr1	214638296	G	A	3.68085E-08	PTPN14	-	FALSE
chr1	55207986	T	A	0.00872	MROH7-TTC4,TTC4	+	FALSE
chr1	24798520	A	C	0.00110	NIPAL3	+	FALSE
chr1	120695197	G	A	2.17750E-05		.	FALSE
chr1	54871874	C	T	2.61533E-07	SSBP3	-	FALSE
chr14	67852067	A	G	2.77652E-05	EIF2S1	+	TRUE	AluJb	SINE,Alu
chr17	65335394	T	C	5.10125E-06	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	3730332	T	C	6.29937E-05	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	10520258	T	C	0.00396		.	FALSE	AluSx	SINE,Alu
chr1	153914500	G	A	3.11507E-05	DENND4B	-	FALSE
chr1	16905869	G	A	0.00027	NBPF1	-	FALSE
chr1	154128837	G	T	0.00032	TPM3	-	FALSE
chr4	57326156	A	G	0.00170	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	54637167	T	C	0.00027		.	FALSE
chr1	220231982	T	C	0.00328	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr17	65334886	T	C	8.05380E-09	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	26138325	G	A	0.00245	SEPN1	+	FALSE
chr1	173863209	G	A	0.00156		.	FALSE
chr19	18047216	C	A	0.00113	CCDC124	+	FALSE
chr2	39009427	A	G	0.00673		.	FALSE	AluSx3	SINE,Alu
chr1	15832543	T	C	0.00553	CASP9	-	FALSE
chr2	1168781	C	A	0.00650	SNTG2	+	FALSE
chr1	26801736	A	T	0.00578	HMGN2	+	FALSE	(T)n	SINE,Alu
chr1	46076533	A	G	1.88265E-05	NASP	+	TRUE	AluSx	SINE,Alu
chr1	154987526	C	T	0.00043	ZBTB7B	+	FALSE
chr17	5288083	T	A	0.00232	RABEP1	+	FALSE
chr19	39982631	A	G	0.00316	TIMM50	+	TRUE	AluJr	SINE,Alu
chr7	156763172	A	G	0.00874	NOM1	+	TRUE	AluSx	SINE,Alu
chr14	23441536	G	A	0.00793	AJUBA	-	FALSE	GA-rich	SINE,Alu
chr2	9629955	G	T	0.00866	ADAM17	-	FALSE
chr1	27634734	G	A	0.00978	WDTC1	+	FALSE
chr1	33148736	A	G	0.00849	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	110950295	C	A	0.00359	LAMTOR5	-	FALSE
chr1	151554503	T	C	0.00619	TUFT1	+	FALSE
chr1	93307479	C	A	0.00085	FAM69A,RPL5	+,-	FALSE
chr1	226333558	A	C	0.00722	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr1	33086876	T	C	0.00399	ZBTB8OS	-	TRUE	AluY	SINE,Alu
chr1	28835934	A	G	3.31538E-06	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	144606963	G	T	0.00337	NBPF20	+	FALSE
chr1	28825418	A	G	0.00046	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr5	102345546	A	C	0.00463	PAM	+	FALSE
chr3	37317605	A	G	9.02711E-05	GOLGA4	+	FALSE
chr3	170114078	A	C	0.00219	SKIL	+	FALSE
chr6	109784327	T	C	0.00854	MICAL1,ZBTB24	-	TRUE	AluSg	SINE,Alu
chr7	44841646	A	C	0.00316	PPIA	+	FALSE	AluJr	SINE,Alu
chr1	19542463	T	C	0.00060	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	145513125	A	G	0.00274	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr2	196999051	C	G	0.00403	STK17B	-	FALSE	MER1B	SINE,Alu
chr1	11722688	G	A	0.00076	FBXO44	+	FALSE
chr17	61897188	G	T	0.00465	FTSJ3	-	FALSE
chr9	125866691	A	C	0.00177	RABGAP1	+	FALSE
chr2	86251114	T	C	0.00709		.	FALSE	AluSx	SINE,Alu
chr1	197070776	C	T	0.00698	ASPM	-	FALSE
chr17	49042388	T	C	2.65954E-10	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	118066459	A	G	0.00729	MAN1A2	+	FALSE
chr11	118875356	A	G	0.00051	CCDC84	+	TRUE
chr2	65496144	A	G	0.00883	ACTR2	+	FALSE
chr1	202311040	A	C	0.00588	UBE2T	-	FALSE
chr8	146016990	C	T	0.00027	RPL8	-	FALSE
chr1	145689537	A	G	0.00028	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	67874731	T	C	0.00565	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	19440460	C	T	0.00073	UBR4	-	FALSE
chr1	121115958	T	C	0.00818	SRGAP2-AS1,SRGAP2D,SRGAP2B,SRGAP2C	+,-	FALSE
chr3	113528895	A	T	0.00191	ATP6V1A	+	FALSE	AluSp	SINE,Alu
chr6	26411987	T	C	0.00405	BTN3A1	+	FALSE
chr19	24103987	A	G	1.84513E-07	ZNF726	+	TRUE	AluSg4	SINE,Alu
chr2	110373919	G	A	0.00669	SOWAHC	+	FALSE
chr3	194361676	C	T	0.00378	LSG1	-	FALSE	MSTA	SINE,Alu
chr2	85772404	C	A	0.00015	GGCX	-	FALSE
chr6	71298639	A	G	0.00339		.	FALSE	AluSp	SINE,Alu
chr1	1717473	A	C	0.00925	GNB1	-	FALSE
chr1	67874689	T	C	1.54545E-05	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	70611296	A	T	0.00061	LRRC40	-	FALSE
chr1	11190646	G	A	0.00369	MTOR	-	FALSE
chr2	161130867	C	A	0.00034	RBMS1	-	FALSE
chr2	176791182	T	C	0.00015	LNPK	-	TRUE	MSTD	SINE,Alu
chr1	38423205	A	G	0.00923	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	36068370	T	C	3.60077E-09	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	14526656	A	G	0.00189	SLC6A6	+	FALSE
chr5	175934037	C	A	0.00182	FAF2	+	FALSE	A-rich	SINE,Alu
chr5	128430757	T	C	0.00338	ISOC1	+	FALSE
chr1	32373831	T	G	0.00252	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr19	11560483	A	G	0.00775	PRKCSH	+	TRUE	AluSx	SINE,Alu
chr2	61277384	A	G	0.00339	PEX13	+	TRUE	AluSx	SINE,Alu
chr1	25168124	G	C	0.00669	CLIC4	+	FALSE
chr3	10004768	G	A	3.85967E-05	EMC3	-	FALSE	Tigger14a	SINE,Alu
chr1	28825465	A	G	0.00496	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	97543764	C	T	0.00901	DPYD	-	FALSE
chr4	17803009	T	C	0.00062	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	16890500	G	A	0.00030	NBPF1	-	FALSE
chr1	67874696	T	C	0.00420	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	23409538	G	A	0.00464	KDM1A	+	FALSE
chr8	30643549	G	C	0.00257	PPP2CB	-	FALSE
chr1	65694080	C	T	0.00442	AK4	+	FALSE	(TCCC)n	SINE,Alu
chr1	38280618	G	T	0.00020	MTF1	-	FALSE	(T)n	SINE,Alu
chr3	14239845	G	A	0.00375	LSM3	+	FALSE
chr2	86364707	G	T	0.00131	PTCD3	+	FALSE
chr1	16891340	T	A	0.00404	NBPF1	-	FALSE
chr5	114547295	C	A	0.00294	PGGT1B	-	FALSE
chr2	32533707	A	G	0.00395		.	FALSE	AluSp	SINE,Alu
chr5	177576461	A	T	0.00659		.	FALSE
chr1	6584872	T	C	9.65243E-06	NOL9	-	TRUE	AluYk2	SINE,Alu
chr1	114226056	C	A	0.00883	MAGI3	+	FALSE
chr1	65692499	C	T	0.00235	AK4	+	FALSE	(T)n	SINE,Alu
chr1	53288862	A	G	0.00570	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	28060574	A	G	0.00206	FAM76A	+	FALSE
chr1	28835847	A	G	4.14471E-06	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr3	170893070	G	A	0.00071	TNIK	-	FALSE
chr12	98942690	A	G	3.03569E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	121133733	G	A	0.00467	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	46828460	C	T	0.00101	NSUN4	+	FALSE
chr17	4840811	A	G	0.00554	SLC25A11	-	FALSE
chr10	101992810	T	C	0.00456	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr2	61370704	T	A	0.00747	LOC339803	-	FALSE
chr7	44841791	C	T	0.00182	PPIA	+	FALSE
chr1	1663957	C	T	0.00345	SLC35E2	-	FALSE
chr1	21808159	G	A	0.00011	NBPF3	+	FALSE
chr1	204521576	A	G	0.00021	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	990984	G	A	0.00018	AGRN	+	FALSE
chr1	114938247	G	A	0.00197	TRIM33	-	FALSE
chr3	10192825	A	G	0.00042	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	211923085	T	G	0.00674	LPGAT1	-	FALSE
chr5	150647736	G	T	0.00964	GM2A	+	FALSE	AluSc	SINE,Alu
chr18	29410068	C	T	0.00807	TRAPPC8	-	FALSE
chr2	37328008	T	C	1.98312E-07		.	FALSE
chr2	206983298	T	C	0.00811		.	FALSE	AluJb	SINE,Alu
chr2	37429738	A	G	0.00203	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr1	45975628	A	G	0.00413	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	27338911	C	T	0.00455	FAM46B	-	FALSE
chr1	148951398	C	T	0.00068	LOC645166	+	FALSE
chr1	54692341	T	C	0.00027	SSBP3	-	FALSE	(T)n	SINE,Alu
chr3	47386062	T	A	4.63678E-05	KLHL18	+	FALSE
chr11	69468187	G	T	0.00827	CCND1	+	FALSE	(T)n	SINE,Alu
chr4	56237899	A	G	0.00503	SRD5A3,SRD5A3-AS1	+,-	FALSE	AluSx	SINE,Alu
chr3	195963397	G	A	0.00037		.	FALSE
chr1	92977228	T	C	0.00206	EVI5	-	TRUE	AluJr	SINE,Alu
chr10	5499824	A	G	0.00070	NET1	+	FALSE
chr15	65442546	T	C	0.00564	CLPX	-	TRUE	AluSg4	SINE,Alu
chr2	37328075	T	C	0.00335		.	FALSE
chr5	151041888	T	G	0.00636	SPARC	-	FALSE
chr14	103372469	A	C	0.00683	TRAF3	+	FALSE	(AC)n	SINE,Alu
chr2	8996323	G	A	0.00159	MBOAT2	-	FALSE
chr4	2940098	T	C	0.00034	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	20976023	T	C	6.30669E-06	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr2	160624383	A	T	0.00018	MARCH7	+	FALSE
chr3	48787640	T	C	0.00038	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr3	88104167	T	C	0.00919	CGGBP1	-	FALSE
chr1	1656557	T	C	0.00061	SLC35E2	-	TRUE	AluSz	SINE,Alu
chr1	79109337	G	T	0.00790	IFI44L	+	FALSE	LTR26	SINE,Alu
chr1	214531239	C	T	6.46771E-05	PTPN14	-	FALSE
chr1	100658578	G	A	5.62742E-07	DBT	-	FALSE
chr2	216225584	G	T	0.00848	FN1	-	FALSE
chr1	204526713	A	G	0.00078	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	179989742	G	C	9.63603E-05	CEP350	+	FALSE
chr8	30536143	T	C	0.00883	GSR	-	TRUE	AluJr	SINE,Alu
chr1	26138325	G	A	0.00027	SEPN1	+	FALSE
chr6	42856330	A	G	2.22045E-16	RPL7L1	+	TRUE
chr1	92976590	G	A	0.00768	EVI5	-	FALSE
chr1	45975498	A	G	9.09033E-05	MMACHC	+	TRUE	AluSx4	SINE,Alu
chrX	118672641	T	C	0.00027	CXorf56	-	TRUE	AluSx	SINE,Alu
chr20	35521047	T	A	0.00064	TLDC2,SAMHD1	+,-	FALSE
chr4	6644457	G	A	0.00059	MRFAP1	+	FALSE
chr1	31732602	C	A	0.00336	SNRNP40	-	FALSE
chrX	2824979	T	C	0.00049	ARSD	-	TRUE	AluSx1	SINE,Alu
chr9	132268442	A	G	0.00642	LINC00963	+	TRUE	AluJb	SINE,Alu
chr1	118066459	A	G	1.18472E-05	MAN1A2	+	FALSE
chr1	155161704	G	C	0.00034	MUC1	-	FALSE
chr11	119533723	A	G	0.00169	NECTIN1	-	FALSE
chr1	241792562	A	G	0.00800	OPN3,CHML	-	FALSE
chr2	50148477	C	T	0.00741	NRXN1	-	FALSE
chr9	132573290	C	T	0.00881	TOR1B	+	FALSE
chr9	33624856	C	T	0.00823	ANXA2P2	+	FALSE
chr1	36533368	A	G	0.00635		.	FALSE	AluSx	SINE,Alu
chr5	149829068	C	T	0.00038	RPS14	-	FALSE
chr1	85715978	C	G	0.00815	C1orf52	-	FALSE
chr1	74672474	G	A	0.00292	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr3	191100561	C	A	2.52744E-07	CCDC50	+	FALSE
chr10	104417853	T	A	0.00393	TRIM8	+	FALSE	(AAT)n	SINE,Alu
chr1	27732103	C	T	0.00786	WASF2	-	FALSE
chr2	64327544	G	T	0.00340	PELI1	-	FALSE
chr2	109401286	G	T	0.00087	RANBP2	+	FALSE
chr1	118068558	G	A	0.00876		.	FALSE
chr1	211921422	T	G	0.00686	LPGAT1	-	FALSE
chr3	20025679	A	G	0.00292	RAB5A,PP2D1	+,-	FALSE
chr3	40503557	T	C	0.00746	RPL14	+	FALSE
chr5	125961166	A	G	0.00732	PHAX	+	TRUE	AluSz	SINE,Alu
chr1	148343689	A	G	0.00517	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	46075171	A	C	0.00140	NASP	+	FALSE	A-rich	SINE,Alu
chr2	99813007	A	G	0.00027	MRPL30	+	TRUE	AluJb	SINE,Alu
chr12	56510698	C	G	0.00019	RPL41	+	FALSE
chr1	39549983	G	A	0.00896	MACF1	+	FALSE
chr10	98278593	A	T	0.00792	TM9SF3	-	FALSE
chr1	148932848	A	G	0.00496	LOC645166	+	FALSE
chr4	47593283	G	C	0.00110	ATP10D	+	FALSE
chr4	2841802	A	G	0.00016	SH3BP2	+	TRUE	AluJb	SINE,Alu
chr1	150597527	T	C	0.00058	ENSA	-	FALSE
chr1	26755136	A	G	0.00279	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr1	31426815	A	G	0.00797	PUM1	-	FALSE
chr1	24296871	G	C	0.00733		.	FALSE	AluSg	SINE,Alu
chr1	45976265	A	G	0.00657	MMACHC	+	FALSE
chr7	35737649	G	A	0.00566	LOC101930085	+	FALSE	AluSz	SINE,Alu
chr1	11347142	C	G	0.00789	UBIAD1	+	FALSE
chr2	86249840	T	C	0.00482	LOC90784	-	TRUE	AluJr	SINE,Alu
chr12	72096206	A	G	2.06003E-07	TMEM19	+	TRUE	AluSz6	SINE,Alu
chr1	224302047	C	T	3.20569E-05	FBXO28	+	FALSE
chr1	10520258	T	C	0.00152		.	FALSE	AluSx	SINE,Alu
chr12	9464358	A	G	0.00056	LOC642846	+	FALSE
chr17	38632679	T	G	0.00044	TNS4	-	FALSE	(GT)n	SINE,Alu
chr1	10519148	T	C	0.00214		.	FALSE	AluSx3	SINE,Alu
chr1	33147722	G	A	1.17176E-11	SYNC,RBBP4	+,-	FALSE
chr12	98943011	A	G	1.18352E-07	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	225678910	T	C	2.51322E-05	ENAH	-	TRUE	AluSx1	SINE,Alu
chr2	37330343	C	T	0.00055		.	FALSE	AluSq2	SINE,Alu
chr2	128951094	A	G	0.00415	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	33149373	A	G	0.00918	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	145369556	A	G	0.00061	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr1	33148716	T	C	0.00835	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr9	139417333	G	A	0.00463	NOTCH1	-	FALSE
chr1	19586520	A	G	0.00846	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	9161179	T	C	0.00570		.	FALSE	AluSx	SINE,Alu
chr6	108363821	T	C	0.00769	OSTM1	-	TRUE	AluJb	SINE,Alu
chr12	125511226	A	G	0.00205	THRIL	-	FALSE	AluSx1	SINE,Alu
chr5	43575009	T	C	0.00498	NNT-AS1	-	TRUE	AluSq2	SINE,Alu
chr5	179041779	C	T	0.00430	HNRNPH1	-	FALSE
chr3	45960558	C	T	6.37727E-08	FYCO1	-	FALSE
chr1	24128467	C	T	0.00481	HMGCL	-	FALSE
chr1	148561090	G	A	8.62202E-05	NBPF15	+	FALSE
chr2	233446266	C	T	0.00177	EIF4E2	+	FALSE
chr1	9740896	C	T	0.00078	PIK3CD,PIK3CD-AS2	+,-	FALSE	MLT1F1	SINE,Alu
chr3	49395694	T	C	0.00074	GPX1	-	FALSE
chr3	69026314	G	A	0.00881	EOGT	-	FALSE	AluSz6	SINE,Alu
chr1	9163110	T	C	4.21626E-05		.	FALSE	FRAM	SINE,Alu
chr1	46075779	A	G	0.00640	NASP	+	TRUE	AluSx4	SINE,Alu
chr3	40578933	A	G	0.00947	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	10520180	T	C	0.00959		.	FALSE	AluSx	SINE,Alu
chr1	155214017	C	A	0.00261	GBA	-	FALSE	AluSx3	SINE,Alu
chr1	1595031	T	C	0.00103	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr5	118175182	T	C	0.00205	DTWD2	-	TRUE	AluJr	SINE,Alu
chr1	156675377	G	C	0.00935	CRABP2	-	FALSE
chr4	39552022	T	C	0.00840	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr3	98518155	A	T	0.00777	DCBLD2	-	FALSE
chr11	94801635	G	T	0.00844	SRSF8	+	FALSE
chr1	38327700	T	C	0.00510	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr1	22352040	G	T	0.00255	LOC101928043,LINC00339	+,-	FALSE
chr2	217366919	A	G	0.00197		.	FALSE	AluSz6	SINE,Alu
chr1	202992954	T	C	0.00042	TMEM183A	+	FALSE
chr20	25428646	A	G	9.98122E-05	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	145689271	A	G	0.00250	NBPF20,NBPF10	+	FALSE
chr1	118472401	C	T	0.00396	WDR3	+	FALSE
chr6	42855954	A	G	3.50340E-05	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	36770064	T	C	0.00086	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	10520076	T	C	0.00075		.	FALSE	AluSx	SINE,Alu
chr3	15483019	G	T	0.00751	EAF1	+	FALSE
chr2	91806132	T	A	0.00460		.	FALSE	MLT1H1	SINE,Alu
chr1	32687472	G	A	0.00877	TMEM234,EIF3I	+,-	FALSE
chr4	68483804	A	T	0.00720	UBA6	-	FALSE
chr1	109240643	A	C	0.00608	PRPF38B	+	FALSE
chr1	1419752	A	G	7.69134E-06	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr22	31375015	A	T	0.00990	TUG1	+	FALSE
chr2	202031506	A	G	0.00508	CFLAR	+	TRUE	SVA_A	SINE,Alu
chr2	61150192	C	A	0.00436	REL	+	FALSE	AluSz6	SINE,Alu
chr1	1549354	G	A	0.00132		.	FALSE	HAL1	SINE,Alu
chr2	233446265	T	C	0.00177	EIF4E2	+	FALSE
chr1	110951224	A	G	0.00352	LAMTOR5-AS1	+	TRUE	AluJr	SINE,Alu
chr1	3545194	C	G	0.00176	TPRG1L	+	FALSE
chr1	16889575	T	C	0.00467	NBPF1	-	TRUE
chr1	10520153	T	C	0.00907		.	FALSE	AluSx	SINE,Alu
chr1	85785557	T	A	0.00141	DDAH1	-	FALSE
chr4	7764131	A	T	5.82585E-11	AFAP1,AFAP1-AS1	+,-	FALSE
chr3	181430508	G	A	3.55222E-06	SOX2-OT,SOX2	+	FALSE
chr2	196602326	T	G	0.00503	SLC39A10	+	FALSE
chr1	204525667	A	G	3.94227E-05	MDM4	+	TRUE	AluSz	SINE,Alu
chr5	40982394	C	T	0.00037	C7	+	FALSE	AluSx1	SINE,Alu
chr3	197612334	A	G	0.00070		.	FALSE	AluSp	SINE,Alu
chr1	16912029	C	G	0.00699	NBPF1	-	FALSE
chr1	200941185	T	G	0.00729	KIF21B	-	FALSE
chr19	58375195	A	G	0.00080	ZNF587	+	TRUE	AluSx4	SINE,Alu
chr15	90819423	A	G	3.09408E-05		.	FALSE	AluSx	SINE,Alu
chr2	68402796	C	T	0.00656	PNO1	+	FALSE
chr14	21929044	T	C	3.48024E-06	RAB2B	-	TRUE	AluSp	SINE,Alu
chr1	9162243	T	C	0.00031		.	FALSE	AluSx	SINE,Alu
chr2	27466552	G	C	0.00396	CAD	+	FALSE
chr1	36282608	G	T	0.00886	AGO4	+	FALSE
chr1	87200770	C	T	0.00623	SH3GLB1	+	FALSE
chr3	112720122	T	A	0.00679	GTPBP8	+	FALSE
chr1	109475427	T	C	0.00185	GPSM2,CLCC1	+,-	FALSE
chr1	145509569	A	G	0.00777	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr5	70248477	T	A	0.00163	SMN1,SMN2	+	FALSE	L1MC5a	SINE,Alu
chr1	19953129	T	A	0.00934	MINOS1,MINOS1-NBL1	+	FALSE
chr1	86815303	T	C	0.00571	ODF2L	-	FALSE
chr2	24223251	A	G	0.00489	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr6	134492485	C	T	0.00245	SGK1	-	FALSE
chr3	196670082	A	T	0.00261	NCBP2-AS2	+	FALSE
chr4	129795659	A	T	0.00459	JADE1	+	FALSE
chr1	1550392	C	T	0.00617		.	FALSE	AluSg	SINE,Alu
chr1	145368665	G	A	0.00031	NBPF20,NBPF10	+	FALSE
chr1	3545196	T	C	0.00035	TPRG1L	+	FALSE
chr2	128951941	A	G	0.00624	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	19585903	G	A	0.00575	MRTO4	+	FALSE	AluJr	SINE,Alu
chr1	93308173	T	G	0.00380	FAM69A	-	FALSE
chr5	96129512	A	G	0.00997	ERAP1	-	FALSE
chr15	41590291	A	C	0.00032	OIP5-AS1	+	FALSE
chr1	10520767	T	C	4.75457E-05	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	146643580	G	A	0.00113	PRKAB2	-	FALSE
chr1	16577908	G	C	0.00686	FBXO42	-	FALSE
chr1	182358196	C	G	0.00929	GLUL	-	FALSE
chr11	94863483	C	T	0.00501	ENDOD1	+	FALSE
chr1	110136328	T	A	0.00577	GNAI3	+	FALSE
chr1	10517306	T	C	0.00176		.	FALSE	AluJr	SINE,Alu
chr7	44047381	G	A	0.00912	POLR2J4,SPDYE1	+,-	FALSE
chr2	55516902	G	A	0.00011	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	197093361	G	A	8.55632E-06	ASPM	-	FALSE
chr1	148241604	G	T	0.00756	NBPF8	-	FALSE	U1	SINE,Alu
chr16	81064629	A	G	6.04166E-07	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	16932144	A	C	1.90883E-05	NBPF1	-	FALSE
chr1	6279950	A	G	0.00541	RNF207	+	TRUE	AluSp	SINE,Alu
chr1	145689611	C	A	0.00142	NBPF20,NBPF10	+	FALSE	AluSg	SINE,Alu
chr1	1419768	A	G	0.00189	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr4	38945834	T	C	0.00287	FAM114A1	+	FALSE	AluSc	SINE,Alu
chr1	40974799	T	C	0.00038	EXO5	+	FALSE
chr1	35647099	A	G	0.00092	SFPQ	-	FALSE
chr10	121437034	G	C	0.00120	BAG3	+	FALSE
chr2	101886749	T	G	0.00534	CNOT11	+	FALSE
chr1	109746825	A	G	0.00427	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr3	44790772	T	C	0.00024	KIAA1143	-	TRUE	AluY	SINE,Alu
chr2	191745652	A	T	1.16463E-05	GLS	+	FALSE
chr16	57505635	G	T	0.00974	POLR2C	+	FALSE
chr1	10521254	T	C	0.00640	DFFA	-	TRUE	AluY	SINE,Alu
chr1	53292607	T	A	2.07283E-05	ZYG11B	+	FALSE
chr1	6282400	T	C	0.00601	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	19586519	A	G	0.00239	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	35320644	A	T	0.00627	SMIM12	-	FALSE
chr2	85772405	T	A	0.00016	GGCX	-	FALSE
chr1	168213413	T	C	0.00733		.	FALSE	AluSx1	SINE,Alu
chr1	144912233	C	T	0.00066	NBPF20,PDE4DIP	+,-	FALSE
chr1	19585917	T	A	0.00308	MRTO4	+	FALSE	AluJr	SINE,Alu
chr1	10240685	C	T	0.00422	UBE4B	+	FALSE
chr12	123253723	A	G	0.00371	DENR	+	TRUE	(AT)n	SINE,Alu
chr1	5937327	C	T	0.00703	NPHP4	-	FALSE
chr5	179048585	T	C	0.00150	HNRNPH1	-	FALSE
chr4	1982726	C	T	0.00828	WHSC1	+	FALSE
chr1	230416399	G	T	5.37638E-05	GALNT2	+	FALSE
chr2	37331275	T	C	0.00884		.	FALSE	AluSx1	SINE,Alu
chr12	123347005	T	A	0.00268	HIP1R	+	FALSE
chr1	28920901	A	G	0.00405	RAB42	+	FALSE	AluSx	SINE,Alu
chr1	51822219	G	A	0.00018	EPS15	-	FALSE
chr1	87213177	C	A	0.00020	SH3GLB1	+	FALSE
chr1	40361783	G	C	0.00023	MYCL	-	FALSE
chr3	191116133	C	T	0.00032	CCDC50	+	FALSE
chr1	46076462	A	G	0.00730	NASP	+	TRUE	AluSx	SINE,Alu
chr1	31342611	A	C	0.00145	SDC3	-	FALSE
chr17	43248581	C	T	0.00012	LOC105371795	-	FALSE
chr2	105963597	C	T	0.00898	C2orf49	+	FALSE
chr3	46007825	T	C	4.58354E-06	FYCO1	-	FALSE
chr6	13788215	T	C	0.00546	MCUR1	-	TRUE	AluSx	SINE,Alu
chr3	12624070	C	T	2.78764E-07	MKRN2	+	FALSE
chr1	17394048	T	A	0.00055	PADI2	-	FALSE
chr3	148863151	A	G	0.00062	HPS3	+	FALSE
chr5	135391374	C	T	3.54402E-06	TGFBI	+	FALSE
chr2	86252112	T	C	0.00233	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	33961147	T	G	0.00236	ZSCAN20	+	FALSE
chr1	100489992	A	G	0.00297	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr1	26308882	A	G	3.99595E-05	PAFAH2	-	FALSE
chr1	19586455	A	G	3.44081E-06	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	37431604	A	G	0.00876	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr7	102119322	T	C	0.00834	POLR2J	-	FALSE
chr1	35319119	A	T	0.00111	SMIM12	-	FALSE	L1ME4c	SINE,Alu
chr7	924639	A	G	0.00285	GET4	+	TRUE	AluJb	SINE,Alu
chr15	41591418	A	G	6.38388E-06	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr7	44918732	T	C	0.00039	PURB	-	FALSE	AluSg	SINE,Alu
chr1	220239448	T	C	0.00157	RNU5F-1,BPNT1	+,-	FALSE
chr1	205759960	C	T	4.24096E-05	SLC41A1	-	FALSE
chr1	28835934	A	G	0.00596	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	227071525	C	T	0.00085	PSEN2	+	FALSE
chr5	109204057	T	A	0.00614	MAN2A1	+	FALSE
chr7	64023371	T	C	0.00824	ZNF680	-	FALSE
chr17	65334846	T	C	0.00456	PSMD12	-	FALSE	AluSq	SINE,Alu
chr2	204055454	T	C	0.00293	NBEAL1	+	FALSE
chr1	28835201	C	T	0.00371	SNHG3,RCC1,SNORA73B	+	FALSE	U17	SINE,Alu
chr1	158067061	G	T	0.00093	KIRREL	+	FALSE
chr5	149363414	A	G	0.00458	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr15	41590972	A	G	2.40282E-05	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	53679610	G	A	0.00073	CPT2	+	FALSE	AluSz	SINE,Alu
chrX	152916229	G	A	0.00809	DUSP9	+	FALSE
chr1	168218522	A	G	9.71811E-05		.	FALSE	AluSz	SINE,Alu
chr1	111682307	G	C	5.71833E-05	DRAM2,CEPT1	+,-	FALSE
chr1	22161275	G	A	0.00600	HSPG2	-	FALSE
chr1	19447819	T	C	0.00337	UBR4	-	FALSE
chr1	160967890	T	C	0.00876	F11R	-	TRUE	AluSp	SINE,Alu
chr2	232319612	A	T	5.77221E-05	NCL	-	FALSE
chr4	17804847	T	C	0.00306	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	209602381	G	A	0.00057	MIR205HG	+	FALSE	AluJb	SINE,Alu
chr5	122682348	A	G	0.00377	CEP120	-	FALSE
chr3	124948049	T	C	0.00709	ZNF148	-	TRUE
chr1	1252468	T	C	0.00096	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr1	148252049	A	C	0.00493	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	85785550	C	A	0.00156	DDAH1	-	FALSE
chr1	59122910	G	A	0.00251	MYSM1	-	FALSE
chr1	40539202	G	A	0.00966	PPT1	-	FALSE
chr2	26477130	T	C	0.00501	HADHB	+	FALSE
chr1	16890130	A	C	0.00412	NBPF1	-	FALSE
chr1	52381354	G	T	0.00157	RAB3B	-	FALSE
chr1	1595586	T	C	0.00051	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr1	177976440	C	T	0.00148	LOC730102	-	FALSE
chrX	106184603	A	T	0.00717	MORC4	-	FALSE	(GA)n	SINE,Alu
chr1	25894460	T	A	0.00520	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr4	128758175	A	G	0.00385		.	FALSE	AluSx	SINE,Alu
chr1	28598287	C	T	0.00188	SESN2	+	FALSE
chr1	145281656	A	T	0.00768	NBPF20,NOTCH2NL	+	FALSE
chr1	10042988	A	G	0.00095	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	66058513	A	G	0.00091	LEPR	+	FALSE
chr1	16200163	A	G	1.36684E-05	SPEN	+	FALSE
chr1	54691922	T	A	0.00067	SSBP3	-	FALSE
chr1	155039464	C	T	2.82294E-06	EFNA4	+	FALSE
chr1	179044110	A	G	0.00885	FAM20B	+	TRUE	AluSx	SINE,Alu

RBP	ZEB2
Knock-Method	siRNA
RBP Family	zf-C2H2
Biosample Name	MDA-231-D
Tissue Type	Breast
Biosample Type	Cell line
# of Control	1
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE98273
Platform	GPL17303
Pubmed ID	28618162

ZEB2 - Target Gene Network