Dataset Overview
RBP
ZMAT4
Knock-Method
siRNA
RBP Family
zf-met
Biosample Name
T47D
Tissue Type
Breast
Biosample Type
Cell line
# of Control
2
# of Treat
2
Species
Human
Data Source
GEO
Profile ID
GSE79586
Platform
GPL167891
Pubmed ID
28813674
ZMAT4 - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of ZMAT4
Show
10
25
50
100
entries
Search:
Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
ABI2
31.64
36.9
0.30199
0.02627
1.00000
AC002398.9
0.42
1.34
1.72053
0.00450
0.61308
AC005013.1
9.66
11.92
0.32780
0.03077
1.00000
AC005280.1
1.02
5.25
2.39331
2.83709E-11
1.95376E-07
AC005523.2
9.53
12.42
0.40675
0.00719
0.78425
AC006978.6
2.1
3.83
0.84891
0.04096
1.00000
AC011330.5
0.73
1.45
1.02689
0.01245
1.00000
AC015987.2
7.42
11.33
0.63266
0.03765
1.00000
ACBD5
15.52
19.34
0.33488
0.01408
1.00000
ACTR1B
29.17
21.34
-0.44997
0.00142
0.33084
Showing 1 to 10 of 422 entries
Previous
1
2
3
4
5
…
43
Next
Function Analysis of Target Genes of ZMAT4
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AAMDC
77542937_77543058_77532187_77532287_77552064_77552301
0.00004
0.666
DataSet_02_92
View details
ABCA11P
431234_431300_419603_420762_466363_466490
0.00755
0.325
DataSet_02_92
View details
ABCF1
30545185_30545232_30539152_30539337_30545594_30545690
0.00063
-0.275
DataSet_02_92
View details
ABCF1
30550170_30550284_30548182_30548296_30550842_30550965
0.00002
0.634
DataSet_02_92
View details
ABHD10
111709546_111709598_111705760_111705898_111710223_111710387
0.00758
0.3
DataSet_02_92
View details
ABHD11
73152205_73152402_73151897_73152065_73152657_73152793
0.00171
-0.419
DataSet_02_92
View details
ABHD11
73152205_73152472_73151975_73152065_73152657_73152713
0.00465
-0.322
DataSet_02_92
View details
ABI2
204259422_204259569_204255766_204255866_204260378_204260503
0.00115
0.5
DataSet_02_92
View details
AC004130.1
20369312_20369405_20368989_20369136_20371272_20371370
0.00443
0.609
DataSet_02_92
View details
AC004951.3
44009330_44009460_44005601_44005994_44012228_44012290
0.00027
-0.834
DataSet_02_92
View details
Showing 1 to 10 of 525 entries
Previous
1
2
3
4
5
…
53
Next
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AC073869.1
132254782_132254866_132256439_132256526_132250385_132250713
0.00000
1.0
DataSet_02_92
View details
ANKMY1
241448764_241448872_241451277_241451418_241446976_241447108
0.00243
-0.75
DataSet_02_92
View details
BCL7B
72954211_72954382_72957877_72957974_72952263_72952343
0.00570
0.366
DataSet_02_92
View details
BORA
73305418_73305525_73309097_73309143_73303063_73303231
0.00754
-0.161
DataSet_02_92
View details
BTN2A2
26385242_26385590_26388240_26388522_26384019_26384143
0.00589
-0.25
DataSet_02_92
View details
C11orf80
66555630_66555740_66563751_66563835_66526513_66526567
0.00011
0.467
DataSet_02_92
View details
CADM1
115069125_115069158_115080293_115080377_115049363_115049495
0.00581
0.103
DataSet_02_92
View details
CBWD5
70475018_70475078_70475443_70475489_70473436_70473474
0.00146
0.755
DataSet_02_92
View details
GABPB2
151060945_151060993_151062881_151063049_151060633_151060773
0.00281
0.368
DataSet_02_92
View details
GIGYF2
233589283_233589401_233599126_233599196_233568133_233568199
0.00453
-0.333
DataSet_02_92
View details
Showing 1 to 10 of 32 entries
Previous
1
2
3
4
Next
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ALG13
110925359_110925522_110925359_110925463_110928192_110928331
0.00027
0.834
DataSet_02_92
View details
ALG6
63836441_63836958_63836441_63836730_63862183_63862268
0.00000
1.0
DataSet_02_92
View details
ANXA2
60644577_60644675_60644581_60644675_60643922_60644018
0.00005
-0.548
DataSet_02_92
View details
ANXA2
60688349_60688626_60688478_60688626_60678226_60678285
0.00043
0.75
DataSet_02_92
View details
APTX
33001513_33001610_33001564_33001610_32989756_32989893
0.00170
0.5
DataSet_02_92
View details
ATP6AP1
153657393_153660003_153657393_153657520_153660175_153660250
0.00000
0.762
DataSet_02_92
View details
CUTA
33385023_33385087_33385027_33385087_33384873_33384919
0.00500
0.0
DataSet_02_92
View details
CYB561
61513367_61513513_61513414_61513513_61513048_61513152
0.00000
-0.612
DataSet_02_92
View details
DAP3
155658881_155659034_155658881_155658965_155679563_155679615
0.00403
0.172
DataSet_02_92
View details
DCTN2
57926515_57926593_57926566_57926593_57926354_57926426
0.00054
0.611
DataSet_02_92
View details
Showing 1 to 10 of 68 entries
Previous
1
2
3
4
5
6
7
Next
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ADCY3
25048913_25048998_25048913_25048995_25050414_25050477
0.00917
-0.576
DataSet_02_92
View details
ADGRG1
57685096_57685534_57685267_57685534_57684164_57684263
0.00004
0.65
DataSet_02_92
View details
ADH5
100002515_100002603_100002515_100002571_100003125_100003267
0.00051
0.81
DataSet_02_92
View details
AGTRAP
11805986_11806280_11806044_11806280_11805859_11805894
0.00421
-0.5
DataSet_02_92
View details
AKAP10
19861326_19861884_19861326_19861880_19866152_19866335
0.00003
0.827
DataSet_02_92
View details
ALG12
50297984_50298154_50297984_50298032_50301368_50301592
0.00194
-0.275
DataSet_02_92
View details
ANAPC15
71822202_71822332_71822202_71822327_71822457_71822542
0.00756
0.44
DataSet_02_92
View details
ANKRD10
111552876_111553041_111552876_111553008_111558379_111558471
0.00001
-0.726
DataSet_02_92
View details
APEH
49720260_49720378_49720275_49720378_49719978_49720169
0.00745
0.118
DataSet_02_92
View details
ATP10D
47538702_47538955_47538747_47538955_47538453_47538581
0.00929
-0.211
DataSet_02_92
View details
Showing 1 to 10 of 106 entries
Previous
1
2
3
4
5
…
11
Next
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AC004889.1
143936132_143936481_143936132_143936188_143936367_143936481
0.00027
-0.834
DataSet_02_92
View details
AL162258.1
153604509_153604716_153604509_153604539_153604630_153604716
0.00584
-0.475
DataSet_02_92
View details
AMZ2P1
62968871_62969635_62968871_62969045_62969359_62969635
0.00007
-0.622
DataSet_02_92
View details
ANAPC5
121756079_121756411_121756079_121756207_121756303_121756411
0.00014
0.484
DataSet_02_92
View details
AP1G2
24030720_24031624_24030720_24030844_24031170_24031624
0.00598
0.325
DataSet_02_92
View details
AP1G2
24032924_24033430_24032924_24033065_24033254_24033430
0.00338
0.442
DataSet_02_92
View details
ATAT1
30613843_30614600_30613843_30613886_30614245_30614600
0.00203
-0.166
DataSet_02_92
View details
BAP1
52436794_52437314_52436794_52436956_52437153_52437314
0.00188
-0.535
DataSet_02_92
View details
BECN1
40970804_40971627_40970804_40970895_40971565_40971627
0.00002
-0.428
DataSet_02_92
View details
C10orf35
71391235_71391595_71391235_71391303_71391464_71391595
0.00242
0.328
DataSet_02_92
View details
Showing 1 to 10 of 94 entries
Previous
1
2
3
4
5
…
10
Next
Differential Variants in RNA (DVRs)
Show
10
25
50
100
entries
Search:
Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
chr1
87811103
T
G
0.00028
LMO4
+
FALSE
chr1
108113839
T
C
1.78857E-05
VAV3
-
FALSE
chr1
10517314
T
C
0.00802
.
FALSE
AluJr
SINE,Alu
chr1
19543457
T
C
0.00101
LOC101927895,EMC1
+,-
FALSE
AluJb
SINE,Alu
chr1
10519932
T
C
0.00710
.
FALSE
AluJr
SINE,Alu
chr1
70718276
G
T
0.00836
.
FALSE
chr1
9160963
T
C
0.00098
.
FALSE
AluJb
SINE,Alu
chr1
226333560
A
T
0.00339
ACBD3
-
FALSE
(CAAAA)n
SINE,Alu
chr1
24864008
A
G
0.00601
.
FALSE
chr1
11084105
T
A
0.00116
TARDBP
+
FALSE
Showing 1 to 10 of 256 entries
Previous
1
2
3
4
5
…
26
Next
Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression